Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1003980 | XP_003621013.1 | 99.145 | 585 | 5 | 0 | 1 | 585 | 1 | 585 | 0.0 | 1217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1003980 | sp|Q852L0|HD16N_ORYSJ | 77.720 | 579 | 127 | 2 | 7 | 585 | 117 | 693 | 0.0 | 968 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1003980 | G7KWQ1 | 99.145 | 585 | 5 | 0 | 1 | 585 | 1 | 585 | 0.0 | 1217 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1003980 | MtrunA17_Chr7g0214531 | 99.145 | 585 | 5 | 0 | 1 | 585 | 1 | 585 | 0.0 | 1217 |
| Msa1003980 | MtrunA17_Chr1g0213321 | 84.550 | 589 | 82 | 2 | 1 | 585 | 79 | 662 | 0.0 | 1067 |
| Msa1003980 | MtrunA17_Chr1g0146301 | 78.401 | 588 | 116 | 3 | 3 | 585 | 89 | 670 | 0.0 | 989 |
| Msa1003980 | MtrunA17_Chr3g0140431 | 77.474 | 586 | 122 | 2 | 4 | 585 | 5 | 584 | 0.0 | 983 |
| Msa1003980 | MtrunA17_Chr7g0253211 | 78.756 | 579 | 122 | 1 | 7 | 585 | 294 | 871 | 0.0 | 982 |
| Msa1003980 | MtrunA17_Chr8g0340491 | 72.509 | 582 | 157 | 3 | 6 | 585 | 97 | 677 | 0.0 | 890 |
| Msa1003980 | MtrunA17_Chr1g0166821 | 39.100 | 289 | 157 | 6 | 31 | 316 | 6 | 278 | 2.55e-60 | 207 |
| Msa1003980 | MtrunA17_Chr2g0329981 | 38.710 | 279 | 154 | 5 | 37 | 312 | 9 | 273 | 2.92e-60 | 207 |
| Msa1003980 | MtrunA17_Chr4g0071031 | 37.809 | 283 | 159 | 5 | 37 | 316 | 9 | 277 | 3.97e-60 | 206 |
| Msa1003980 | MtrunA17_Chr2g0299661 | 37.993 | 279 | 156 | 5 | 37 | 312 | 9 | 273 | 1.09e-59 | 206 |
| Msa1003980 | MtrunA17_Chr7g0261501 | 38.516 | 283 | 157 | 5 | 37 | 316 | 9 | 277 | 3.77e-59 | 204 |
| Msa1003980 | MtrunA17_Chr1g0187571 | 38.754 | 289 | 158 | 6 | 31 | 316 | 6 | 278 | 2.58e-58 | 202 |
| Msa1003980 | MtrunA17_Chr1g0183631 | 37.716 | 289 | 161 | 6 | 31 | 316 | 5 | 277 | 7.00e-58 | 200 |
| Msa1003980 | MtrunA17_Chr8g0342821 | 37.276 | 279 | 157 | 6 | 37 | 312 | 9 | 272 | 3.57e-57 | 199 |
| Msa1003980 | MtrunA17_Chr6g0486611 | 36.268 | 284 | 164 | 5 | 37 | 317 | 9 | 278 | 7.05e-56 | 194 |
| Msa1003980 | MtrunA17_Chr8g0390211 | 36.735 | 294 | 166 | 7 | 27 | 317 | 2 | 278 | 2.96e-55 | 192 |
| Msa1003980 | MtrunA17_Chr1g0167261 | 37.370 | 289 | 160 | 6 | 29 | 312 | 4 | 276 | 1.63e-54 | 188 |
| Msa1003980 | MtrunA17_Chr1g0146151 | 35.439 | 285 | 165 | 6 | 31 | 312 | 5 | 273 | 3.52e-53 | 187 |
| Msa1003980 | MtrunA17_Chr3g0140071 | 35.088 | 285 | 166 | 6 | 31 | 312 | 5 | 273 | 4.92e-53 | 187 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1003980 | AT3G13670.1 | 84.812 | 586 | 83 | 2 | 1 | 582 | 103 | 686 | 0.0 | 1068 |
| Msa1003980 | AT2G25760.1 | 77.265 | 585 | 124 | 4 | 3 | 582 | 76 | 656 | 0.0 | 979 |
| Msa1003980 | AT2G25760.2 | 77.041 | 588 | 123 | 6 | 3 | 582 | 76 | 659 | 0.0 | 972 |
| Msa1003980 | AT5G18190.2 | 76.511 | 579 | 135 | 1 | 7 | 585 | 100 | 677 | 0.0 | 962 |
| Msa1003980 | AT5G18190.1 | 76.511 | 579 | 135 | 1 | 7 | 585 | 100 | 677 | 0.0 | 962 |
| Msa1003980 | AT3G03940.1 | 76.166 | 579 | 137 | 1 | 7 | 585 | 110 | 687 | 0.0 | 960 |
| Msa1003980 | AT3G03930.1 | 65.863 | 249 | 76 | 2 | 343 | 582 | 23 | 271 | 1.95e-113 | 340 |
| Msa1003980 | AT5G44100.1 | 38.408 | 289 | 159 | 6 | 31 | 316 | 5 | 277 | 7.36e-60 | 207 |
| Msa1003980 | AT5G44100.2 | 38.408 | 289 | 159 | 6 | 31 | 316 | 5 | 277 | 7.36e-60 | 207 |
| Msa1003980 | AT2G19470.1 | 38.516 | 283 | 157 | 5 | 37 | 316 | 9 | 277 | 8.59e-60 | 205 |
| Msa1003980 | AT1G03930.1 | 38.596 | 285 | 156 | 6 | 31 | 312 | 5 | 273 | 1.09e-59 | 206 |
| Msa1003980 | AT3G23340.1 | 38.754 | 289 | 158 | 6 | 31 | 316 | 5 | 277 | 2.05e-59 | 204 |
| Msa1003980 | AT4G28540.1 | 38.062 | 289 | 160 | 6 | 31 | 316 | 9 | 281 | 7.26e-59 | 204 |
| Msa1003980 | AT4G14340.2 | 38.408 | 289 | 159 | 6 | 31 | 316 | 11 | 283 | 7.67e-59 | 201 |
| Msa1003980 | AT4G14340.1 | 38.408 | 289 | 159 | 6 | 31 | 316 | 11 | 283 | 1.58e-58 | 202 |
| Msa1003980 | AT4G26100.1 | 36.749 | 283 | 162 | 5 | 37 | 316 | 9 | 277 | 2.12e-58 | 202 |
| Msa1003980 | AT4G28860.2 | 37.543 | 293 | 163 | 7 | 27 | 316 | 2 | 277 | 2.02e-57 | 197 |
| Msa1003980 | AT4G28860.1 | 37.543 | 293 | 163 | 7 | 27 | 316 | 2 | 277 | 6.47e-57 | 197 |
| Msa1003980 | AT1G04440.1 | 38.062 | 289 | 160 | 6 | 31 | 316 | 5 | 277 | 9.71e-57 | 198 |
| Msa1003980 | AT5G43320.1 | 38.062 | 289 | 160 | 6 | 31 | 316 | 5 | 277 | 1.03e-56 | 198 |
| Msa1003980 | AT4G28880.3 | 37.884 | 293 | 162 | 7 | 27 | 316 | 2 | 277 | 1.27e-56 | 196 |
| Msa1003980 | AT4G28880.2 | 37.884 | 293 | 162 | 7 | 27 | 316 | 2 | 277 | 1.27e-56 | 196 |
| Msa1003980 | AT4G28880.1 | 37.884 | 293 | 162 | 7 | 27 | 316 | 2 | 277 | 1.27e-56 | 196 |
| Msa1003980 | AT4G28880.4 | 37.884 | 293 | 162 | 7 | 27 | 316 | 2 | 277 | 1.27e-56 | 196 |
| Msa1003980 | AT1G72710.1 | 37.276 | 279 | 157 | 6 | 37 | 312 | 9 | 272 | 1.39e-56 | 197 |
| Msa1003980 | AT5G57015.1 | 36.042 | 283 | 164 | 5 | 37 | 316 | 9 | 277 | 1.91e-56 | 196 |
| Msa1003980 | AT5G43320.2 | 38.062 | 289 | 160 | 6 | 31 | 316 | 5 | 277 | 2.65e-56 | 194 |
| Msa1003980 | AT5G43320.3 | 38.062 | 289 | 160 | 6 | 31 | 316 | 5 | 277 | 2.65e-56 | 194 |
| Msa1003980 | AT3G23340.2 | 39.245 | 265 | 151 | 5 | 57 | 316 | 4 | 263 | 5.46e-54 | 189 |
| Msa1003980 | AT4G08800.1 | 32.509 | 283 | 142 | 6 | 37 | 316 | 9 | 245 | 1.99e-42 | 154 |
Find 178 sgRNAs with CRISPR-Local
Find 569 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAATTGGTAGGTTGAATT+TGG | 0.163094 | 7_1:-1056194 | None:intergenic |
| CAATCTCTGGGCACTTATTA+TGG | 0.176547 | 7_1:+1061018 | Msa1003980:CDS |
| TAGGTTGAATTTGGAGAATT+AGG | 0.195629 | 7_1:-1056185 | None:intergenic |
| CTTCCTTTATAATGTACTTT+AGG | 0.233162 | 7_1:-1057979 | None:intergenic |
| CATCTCTACCTTTGCTTCAT+TGG | 0.235235 | 7_1:-1059994 | None:intergenic |
| TGGCTTCTTGTTCCAATCTC+TGG | 0.237696 | 7_1:+1061005 | Msa1003980:CDS |
| AAAAGAAACCTGAACATATC+AGG | 0.258582 | 7_1:-1059232 | None:intergenic |
| TGAGCACCTTCAGTATTAAT+TGG | 0.274374 | 7_1:-1059734 | None:intergenic |
| GGTGGTAATGACCGTCTTAA+TGG | 0.277319 | 7_1:+1057617 | Msa1003980:CDS |
| AAACTTGGCAAAGGTGGATT+TGG | 0.289497 | 7_1:+1057566 | Msa1003980:CDS |
| TCTTCTCTTACCAAGTTATC+AGG | 0.290272 | 7_1:-1056476 | None:intergenic |
| TGCAAGTGTTCATGCTCATT+TGG | 0.304706 | 7_1:+1059333 | Msa1003980:CDS |
| GAATTTGGAGAATTAGGGTT+AGG | 0.322608 | 7_1:-1056179 | None:intergenic |
| AACAGTAAAGGTTGCAACTA+TGG | 0.325296 | 7_1:+1057767 | Msa1003980:CDS |
| GTTACCATGGCAAGGTTATC+AGG | 0.332076 | 7_1:+1059426 | Msa1003980:CDS |
| AACCATTATCCCATCGTCTA+TGG | 0.333296 | 7_1:-1063006 | None:intergenic |
| TTTCTTGTTGATCTCGGATT+AGG | 0.333361 | 7_1:+1059076 | Msa1003980:CDS |
| GTCCAAGCTTGTGGGATGTT+TGG | 0.336979 | 7_1:+1058131 | Msa1003980:CDS |
| TCTATAGCTGGGGTTACTAA+TGG | 0.339143 | 7_1:+1061237 | Msa1003980:CDS |
| CTTATTATGGATGCTGGAAC+TGG | 0.352603 | 7_1:+1061031 | Msa1003980:CDS |
| GGCTTCTTGTTCCAATCTCT+GGG | 0.354817 | 7_1:+1061006 | Msa1003980:CDS |
| TTTGTTGGTCGTCGAGTAAC+CGG | 0.359465 | 7_1:+1057596 | Msa1003980:CDS |
| TTCTTCTCTTGTGCTGTACC+TGG | 0.364237 | 7_1:-1059049 | None:intergenic |
| ATTGGCCGCAGTGCAGGATT+TGG | 0.366177 | 7_1:-1059716 | None:intergenic |
| CATAATAAGTGCCCAGAGAT+TGG | 0.371273 | 7_1:-1061017 | None:intergenic |
| GACGATGGGATAATGGTTAC+AGG | 0.373311 | 7_1:+1063011 | Msa1003980:CDS |
| AGCAATGCATGCCACCATTT+CGG | 0.376237 | 7_1:-1058838 | None:intergenic |
| CCGTGATAGCGGCACAAGTT+TGG | 0.378481 | 7_1:-1056406 | None:intergenic |
| ATTTCCAAGCACACATGTTA+AGG | 0.378927 | 7_1:+1063135 | Msa1003980:CDS |
| GGCCACTGCTGGAAGTCGTT+GGG | 0.383031 | 7_1:+1062079 | Msa1003980:CDS |
| AGGTTGAATTTGGAGAATTA+GGG | 0.387890 | 7_1:-1056184 | None:intergenic |
| GCAAGTGTTCATGCTCATTT+GGG | 0.388698 | 7_1:+1059334 | Msa1003980:CDS |
| CAGAAGCAGCATAGCATCTC+AGG | 0.394079 | 7_1:-1059590 | None:intergenic |
| CTTCTTGTTTATCCATTTGA+AGG | 0.400317 | 7_1:-1062027 | None:intergenic |
| TATTACATTACTTCTATAGC+TGG | 0.401862 | 7_1:+1061225 | Msa1003980:CDS |
| ATCCATAGACGATGGGATAA+TGG | 0.409318 | 7_1:+1063004 | Msa1003980:CDS |
| ATACCTAAAGTACATTATAA+AGG | 0.411632 | 7_1:+1057976 | Msa1003980:CDS |
| GGCTCAAATATCTCAATAAC+CGG | 0.418799 | 7_1:-1056455 | None:intergenic |
| GATATTTGAGCCTGATAACT+TGG | 0.421167 | 7_1:+1056466 | Msa1003980:five_prime_UTR |
| GATATTAGCTTGGAATAGTT+AGG | 0.422192 | 7_1:-1059671 | None:intergenic |
| ATTGATATCCATTGTGTAGC+AGG | 0.425137 | 7_1:-1059955 | None:intergenic |
| ACACATACCCTCTCAGGAAA+AGG | 0.427758 | 7_1:-1056590 | None:intergenic |
| GATAACCTTGCCATGGTAAC+CGG | 0.435532 | 7_1:-1059423 | None:intergenic |
| CTATAGCTGGGGTTACTAAT+GGG | 0.437207 | 7_1:+1061238 | Msa1003980:CDS |
| ACCAGCGCCCTGATATGTTC+AGG | 0.437919 | 7_1:+1059224 | Msa1003980:CDS |
| TTAGGGTTAGGGTTTGATGC+AGG | 0.440418 | 7_1:-1056167 | None:intergenic |
| TTCAAAGTGGAGAGGAAACT+TGG | 0.443586 | 7_1:+1057551 | Msa1003980:CDS |
| GCGAGTCTTTCCCCTTCAAA+TGG | 0.445977 | 7_1:+1062015 | Msa1003980:CDS |
| CACATACCCTCTCAGGAAAA+GGG | 0.446418 | 7_1:-1056589 | None:intergenic |
| GAAGAGGTAGAAGAAATTGA+AGG | 0.450955 | 7_1:+1056494 | Msa1003980:five_prime_UTR |
| GTATTAATTGGCCGCAGTGC+AGG | 0.451258 | 7_1:-1059722 | None:intergenic |
| TCTCTTGTGGTGATGTCAAA+AGG | 0.451724 | 7_1:+1061264 | Msa1003980:CDS |
| GTTTCCTGAGTTTCGTCAGC+AGG | 0.453762 | 7_1:-1063097 | None:intergenic |
| CAGCATACCTCAGTGGCACC+GGG | 0.458135 | 7_1:-1057641 | None:intergenic |
| TAATACTGAAGGTGCTCAAA+AGG | 0.460450 | 7_1:+1059739 | Msa1003980:CDS |
| TCAGCATACCTCAGTGGCAC+CGG | 0.460949 | 7_1:-1057642 | None:intergenic |
| TCCTTGTTTGATAGTGTGCT+TGG | 0.461993 | 7_1:+1059692 | Msa1003980:CDS |
| TGTGGAGTCATTGTCGATCT+TGG | 0.469974 | 7_1:+1058860 | Msa1003980:CDS |
| AATCAACGCACACGATGATC+AGG | 0.469979 | 7_1:+1056296 | Msa1003980:five_prime_UTR |
| AAATTGTTTCTTGTTGATCT+CGG | 0.470903 | 7_1:+1059070 | Msa1003980:CDS |
| GTGACTTCAATGGCCACTGC+TGG | 0.476110 | 7_1:+1062068 | Msa1003980:CDS |
| ATGTAGGATGTCTGCCGAAA+TGG | 0.477227 | 7_1:+1058824 | Msa1003980:intron |
| ATTACATTACTTCTATAGCT+GGG | 0.477779 | 7_1:+1061226 | Msa1003980:CDS |
| GGAATGGATCATGGAGCAAT+GGG | 0.480666 | 7_1:+1061194 | Msa1003980:intron |
| GTTGTTATGTCACGGAATGC+TGG | 0.481715 | 7_1:+1062104 | Msa1003980:CDS |
| AATTTGGAGAATTAGGGTTA+GGG | 0.484069 | 7_1:-1056178 | None:intergenic |
| GAGAGGTAGATTGAATATTG+AGG | 0.484728 | 7_1:+1059888 | Msa1003980:CDS |
| TGGCAAAGGTGGATTTGGAC+AGG | 0.492641 | 7_1:+1057571 | Msa1003980:CDS |
| TTCCAAACATCCCACAAGCT+TGG | 0.493712 | 7_1:-1058133 | None:intergenic |
| AGAAGAAATTGAAGGGGTGA+TGG | 0.494085 | 7_1:+1056502 | Msa1003980:exon |
| CGTCTATGGATTCCCTCACT+AGG | 0.494306 | 7_1:-1062992 | None:intergenic |
| CATAGGACACATACCCTCTC+AGG | 0.494559 | 7_1:-1056596 | None:intergenic |
| GGAGCAGGACGACGAAGTAC+TGG | 0.504517 | 7_1:-1056366 | None:intergenic |
| ATCAAACAAGGATATTAGCT+TGG | 0.504809 | 7_1:-1059681 | None:intergenic |
| TGGCCACTGCTGGAAGTCGT+TGG | 0.506701 | 7_1:+1062078 | Msa1003980:CDS |
| AGGAAATGTCTGAAAGGAGT+AGG | 0.507896 | 7_1:-1059614 | None:intergenic |
| GAATGCTGGATTCAGTGATC+AGG | 0.508380 | 7_1:+1062118 | Msa1003980:CDS |
| AAGAGGTAGAAGAAATTGAA+GGG | 0.508434 | 7_1:+1056495 | Msa1003980:five_prime_UTR |
| GAACACATGCAGTAGATTTG+TGG | 0.509091 | 7_1:-1056335 | None:intergenic |
| CATGCTTGGTCCAAGCTTGT+GGG | 0.512086 | 7_1:+1058123 | Msa1003980:CDS |
| TTCTTGTTTATCCATTTGAA+GGG | 0.516197 | 7_1:-1062026 | None:intergenic |
| TTCCTCTCCACTTTGAACAT+AGG | 0.519828 | 7_1:-1057545 | None:intergenic |
| AGTACTTCGTCGTCCTGCTC+CGG | 0.521539 | 7_1:+1056368 | Msa1003980:five_prime_UTR |
| AGCACCCTTGGTGGAAGTCA+TGG | 0.521686 | 7_1:+1057952 | Msa1003980:intron |
| TGGGCACTTATTATGGATGC+TGG | 0.523125 | 7_1:+1061025 | Msa1003980:CDS |
| TCACAGCAACTGCAGCTACA+TGG | 0.524987 | 7_1:+1063035 | Msa1003980:CDS |
| CTAACCTTAACATGTGTGCT+TGG | 0.525324 | 7_1:-1063139 | None:intergenic |
| AGGTGTTGCTCAAGAGGATG+AGG | 0.525431 | 7_1:+1056556 | Msa1003980:CDS |
| TCAAATGGATAAACAAGAAG+TGG | 0.528244 | 7_1:+1062030 | Msa1003980:CDS |
| CCAAACTTGTGCCGCTATCA+CGG | 0.529396 | 7_1:+1056406 | Msa1003980:five_prime_UTR |
| ACGAAACTCAGGAAACTCTT+CGG | 0.529891 | 7_1:+1063104 | Msa1003980:CDS |
| TTCTTTATAGGAATGGATCA+TGG | 0.534028 | 7_1:+1061185 | Msa1003980:intron |
| CGGCCTTCTTATTAGTTGTG+TGG | 0.534547 | 7_1:+1060985 | Msa1003980:CDS |
| ACCTGAACATATCAGGGCGC+TGG | 0.539965 | 7_1:-1059225 | None:intergenic |
| GGTGGTTTGAGTGCTAATAA+AGG | 0.540456 | 7_1:+1056536 | Msa1003980:CDS |
| AGGAATGGATCATGGAGCAA+TGG | 0.542705 | 7_1:+1061193 | Msa1003980:intron |
| TAATAAAGGTGTTGCTCAAG+AGG | 0.543294 | 7_1:+1056550 | Msa1003980:CDS |
| TACTAATGGGAGCTCTCTTG+TGG | 0.544290 | 7_1:+1061251 | Msa1003980:CDS |
| TTCATAAAGGCCGGTTACCA+TGG | 0.544662 | 7_1:+1059413 | Msa1003980:CDS |
| ATGCAGGTTATGGACATGCT+TGG | 0.546212 | 7_1:+1058109 | Msa1003980:intron |
| GAAGAAATTGAAGGGGTGAT+GGG | 0.548399 | 7_1:+1056503 | Msa1003980:exon |
| GACCCAAAGGTTCAAGTAGG+AGG | 0.548405 | 7_1:+1057518 | Msa1003980:intron |
| TTTGAACATAGAAACAGTAA+AGG | 0.551586 | 7_1:+1057755 | Msa1003980:CDS |
| TGGGATGTTTGGAATACCAC+AGG | 0.555511 | 7_1:+1058142 | Msa1003980:CDS |
| AAGCCACACAACTAATAAGA+AGG | 0.555747 | 7_1:-1060988 | None:intergenic |
| AAGACCTGCTGACGAAACTC+AGG | 0.556055 | 7_1:+1063093 | Msa1003980:CDS |
| TCTTGGAGAAGATGCACTCA+AGG | 0.557515 | 7_1:+1058877 | Msa1003980:CDS |
| CACAGCAACTGCAGCTACAT+GGG | 0.559415 | 7_1:+1063036 | Msa1003980:CDS |
| GAGAGGAAACTTGGCAAAGG+TGG | 0.562906 | 7_1:+1057560 | Msa1003980:CDS |
| ACATGCTTGGTCCAAGCTTG+TGG | 0.566277 | 7_1:+1058122 | Msa1003980:CDS |
| ATTAAGACGGTCATTACCAC+CGG | 0.568388 | 7_1:-1057615 | None:intergenic |
| TTGTACACTTGCCACTCGTA+AGG | 0.569716 | 7_1:-1057794 | None:intergenic |
| GGATTCCCTCACTAGGGTAG+AGG | 0.571629 | 7_1:-1062985 | None:intergenic |
| AATGACCGTCTTAATGGCCC+CGG | 0.574417 | 7_1:+1057623 | Msa1003980:CDS |
| TACACTTGCCACTCGTAAGG+AGG | 0.576490 | 7_1:-1057791 | None:intergenic |
| ATAAACAAGAAGTGGAGAGA+AGG | 0.576509 | 7_1:+1062038 | Msa1003980:CDS |
| TTTGACCCAAAGGTTCAAGT+AGG | 0.576801 | 7_1:+1057515 | Msa1003980:intron |
| TGATAACTTGGTAAGAGAAG+AGG | 0.576856 | 7_1:+1056478 | Msa1003980:five_prime_UTR |
| TGTTTGGAATACCACAGGCC+AGG | 0.580670 | 7_1:+1058147 | Msa1003980:CDS |
| AACTCAAGGAAATGTCTGAA+AGG | 0.580963 | 7_1:-1059620 | None:intergenic |
| GTTGGGGTGTTGTTATGTCA+CGG | 0.581602 | 7_1:+1062096 | Msa1003980:CDS |
| TCATGTTCACTACAAACTCA+AGG | 0.582669 | 7_1:-1059634 | None:intergenic |
| GTGTTCATGCTCATTTGGGA+AGG | 0.584104 | 7_1:+1059338 | Msa1003980:CDS |
| GGGGTGATGGGTGATGAAAG+TGG | 0.587284 | 7_1:+1056515 | Msa1003980:exon |
| TAATGGCCCCGGTGCCACTG+AGG | 0.587700 | 7_1:+1057634 | Msa1003980:CDS |
| TATCATTACAATGTAGCGGA+TGG | 0.588065 | 7_1:+1060926 | Msa1003980:CDS |
| TGGCACCGGGGCCATTAAGA+CGG | 0.592504 | 7_1:-1057628 | None:intergenic |
| AGAGGTAGAAGAAATTGAAG+GGG | 0.594831 | 7_1:+1056496 | Msa1003980:five_prime_UTR |
| CAAGAATGCCAATGAAGCAA+AGG | 0.595613 | 7_1:+1059986 | Msa1003980:CDS |
| GGAAATGTCTGAAAGGAGTA+GGG | 0.595669 | 7_1:-1059613 | None:intergenic |
| TGATTTCCTCTACCCTAGTG+AGG | 0.596385 | 7_1:+1062979 | Msa1003980:CDS |
| GTTCATTATAGATATGTGCA+TGG | 0.597598 | 7_1:+1058992 | Msa1003980:intron |
| CTTGGAGAAGATGCACTCAA+GGG | 0.598220 | 7_1:+1058878 | Msa1003980:CDS |
| GATTTCCTCTACCCTAGTGA+GGG | 0.598868 | 7_1:+1062980 | Msa1003980:CDS |
| CTGCGGCCAATTAATACTGA+AGG | 0.599700 | 7_1:+1059728 | Msa1003980:CDS |
| AAGTGGAGAGACACCTCCAC+TGG | 0.602028 | 7_1:+1059184 | Msa1003980:CDS |
| AAAGAAACCTGAACATATCA+GGG | 0.602522 | 7_1:-1059231 | None:intergenic |
| GTCTATGGATTCCCTCACTA+GGG | 0.605702 | 7_1:-1062991 | None:intergenic |
| TACCAGGTCGGGCAAAAGAG+AGG | 0.609022 | 7_1:+1059871 | Msa1003980:intron |
| TGAGGGAATCCATAGACGAT+GGG | 0.610527 | 7_1:+1062997 | Msa1003980:CDS |
| TCTTGTTTATCCATTTGAAG+GGG | 0.615159 | 7_1:-1062025 | None:intergenic |
| CGCCTATGTTCAAAGTGGAG+AGG | 0.617102 | 7_1:+1057543 | Msa1003980:CDS |
| TATTCCATGACTTCCACCAA+GGG | 0.620145 | 7_1:-1057956 | None:intergenic |
| GTGAGGGAATCCATAGACGA+TGG | 0.620456 | 7_1:+1062996 | Msa1003980:CDS |
| ACCCCAACGACTTCCAGCAG+TGG | 0.622356 | 7_1:-1062081 | None:intergenic |
| TTATACTCACGCCTGGCCTG+TGG | 0.625190 | 7_1:-1058158 | None:intergenic |
| TTCAACATGCTGACCAGTGG+AGG | 0.626398 | 7_1:-1059197 | None:intergenic |
| TTACATTACTTCTATAGCTG+GGG | 0.629898 | 7_1:+1061227 | Msa1003980:CDS |
| ATATTCAACATGCTGACCAG+TGG | 0.633992 | 7_1:-1059200 | None:intergenic |
| ACATACCCTCTCAGGAAAAG+GGG | 0.634258 | 7_1:-1056588 | None:intergenic |
| AGCACCTGATAACCTTGCCA+TGG | 0.635229 | 7_1:-1059430 | None:intergenic |
| TTGGAGAAGATGCACTCAAG+GGG | 0.638893 | 7_1:+1058879 | Msa1003980:CDS |
| AAAGGCCGGTTACCATGGCA+AGG | 0.640441 | 7_1:+1059418 | Msa1003980:CDS |
| ACAAGGAGAATATTACGTGA+TGG | 0.641400 | 7_1:+1058002 | Msa1003980:CDS |
| ACACTTGCCACTCGTAAGGA+GGG | 0.643172 | 7_1:-1057790 | None:intergenic |
| GTAGAGCGAGGGATTGCAGA+CGG | 0.643300 | 7_1:+1060965 | Msa1003980:CDS |
| CTCTTATATTAAGCAAACCA+AGG | 0.643646 | 7_1:+1063068 | Msa1003980:CDS |
| GCCACTGCTGGAAGTCGTTG+GGG | 0.646395 | 7_1:+1062080 | Msa1003980:CDS |
| TTAGCGCAGCATGTAGAGCG+AGG | 0.648996 | 7_1:+1060953 | Msa1003980:CDS |
| TCCAAGCACACTATCAAACA+AGG | 0.651722 | 7_1:-1059693 | None:intergenic |
| GTGGAGAGGAAACTTGGCAA+AGG | 0.654106 | 7_1:+1057557 | Msa1003980:CDS |
| TAGCGCAGCATGTAGAGCGA+GGG | 0.654538 | 7_1:+1060954 | Msa1003980:CDS |
| TAGGATGTCTGCCGAAATGG+TGG | 0.657696 | 7_1:+1058827 | Msa1003980:intron |
| GTACATTATAAAGGAAGACA+AGG | 0.658821 | 7_1:+1057985 | Msa1003980:CDS |
| GTTGGTCGTCGAGTAACCGG+TGG | 0.658919 | 7_1:+1057599 | Msa1003980:CDS |
| GGTGTTGCTCAAGAGGATGA+GGG | 0.659331 | 7_1:+1056557 | Msa1003980:CDS |
| TAGGTATCATTACAATGTAG+CGG | 0.659418 | 7_1:+1060922 | Msa1003980:intron |
| AATGGTGGCATGCATTGCTG+TGG | 0.668208 | 7_1:+1058842 | Msa1003980:CDS |
| GTATTCCATGACTTCCACCA+AGG | 0.671722 | 7_1:-1057957 | None:intergenic |
| AGGTTCGCCTATGTTCAAAG+TGG | 0.676871 | 7_1:+1057538 | Msa1003980:CDS |
| ACTATGGCCCTCCTTACGAG+TGG | 0.689741 | 7_1:+1057783 | Msa1003980:CDS |
| AGCATACCTCAGTGGCACCG+GGG | 0.709149 | 7_1:-1057640 | None:intergenic |
| TGGAGAAGATGCACTCAAGG+GGG | 0.711646 | 7_1:+1058880 | Msa1003980:CDS |
| CACATGCAGTAGATTTGTGG+CGG | 0.728618 | 7_1:-1056332 | None:intergenic |
| CAACCCTCAGCATACCTCAG+TGG | 0.734914 | 7_1:-1057648 | None:intergenic |
| GTGATGGGTGATGAAAGTGG+TGG | 0.743174 | 7_1:+1056518 | Msa1003980:exon |
| AACTTGTGCCGCTATCACGG+CGG | 0.760975 | 7_1:+1056409 | Msa1003980:five_prime_UTR |
| TTGGACCAAATCCTGCACTG+CGG | 0.818000 | 7_1:+1059711 | Msa1003980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGAATGAATTTATTATTTA+TGG | + | chr7_1:1056803-1056822 | Msa1003980:intron | 10.0% |
| !! | TCATTAAAAAAATAGTTAAT+TGG | - | chr7_1:1058074-1058093 | None:intergenic | 10.0% |
| !!! | TTTAAAGTTAAATCATAATA+GGG | - | chr7_1:1060124-1060143 | None:intergenic | 10.0% |
| !!! | TTTTAAAGTTAAATCATAAT+AGG | - | chr7_1:1060125-1060144 | None:intergenic | 10.0% |
| !!! | GCAATTTTTAAAAAAAATTA+AGG | + | chr7_1:1060235-1060254 | Msa1003980:intron | 10.0% |
| !!! | TTTTAAAAAAAATTAAGGTA+CGG | + | chr7_1:1060240-1060259 | Msa1003980:intron | 10.0% |
| !! | GAAAAAAATAAATAATTGGT+AGG | - | chr7_1:1056207-1056226 | None:intergenic | 15.0% |
| !!! | TTAGATCATGTTTTTTTTTT+TGG | + | chr7_1:1056652-1056671 | Msa1003980:intron | 15.0% |
| !! | TATAGATTTATTGATATCTA+TGG | + | chr7_1:1056855-1056874 | Msa1003980:intron | 15.0% |
| !! | TATAGATTTATTGATATCTA+TGG | + | chr7_1:1056855-1056874 | Msa1003980:intron | 15.0% |
| !! | TATAAAAATATGTAATCAGT+AGG | + | chr7_1:1057073-1057092 | Msa1003980:intron | 15.0% |
| !!! | TAATTCATTGCATATTTTTT+GGG | - | chr7_1:1057287-1057306 | None:intergenic | 15.0% |
| !!! | ATAATTCATTGCATATTTTT+TGG | - | chr7_1:1057288-1057307 | None:intergenic | 15.0% |
| !! | AAATATAAAAAACAAATCTC+AGG | - | chr7_1:1057924-1057943 | None:intergenic | 15.0% |
| !! | ATTATCATTATATTATATGC+AGG | + | chr7_1:1058093-1058112 | Msa1003980:intron | 15.0% |
| !! | AATATACAATCAATATGTAA+CGG | - | chr7_1:1058237-1058256 | None:intergenic | 15.0% |
| !! | TTTCTTTGTTAAGATTATAT+TGG | + | chr7_1:1058263-1058282 | Msa1003980:intron | 15.0% |
| !!! | AGATTAGTTATATTTTGTAT+AGG | + | chr7_1:1058341-1058360 | Msa1003980:intron | 15.0% |
| !!! | TGTTTGTCTTTTTTTTTTAA+TGG | + | chr7_1:1058773-1058792 | Msa1003980:intron | 15.0% |
| !!! | TATATTTTTAATTTTTGCAG+AGG | + | chr7_1:1059298-1059317 | Msa1003980:intron | 15.0% |
| !! | TTTAAAAAAAATTAAGGTAC+GGG | + | chr7_1:1060241-1060260 | Msa1003980:intron | 15.0% |
| !!! | TAACAAAATTCATGATTTTA+TGG | - | chr7_1:1060272-1060291 | None:intergenic | 15.0% |
| !! | AAAAATTTGAAAATTAGTGT+TGG | + | chr7_1:1060355-1060374 | Msa1003980:intron | 15.0% |
| !!! | AAAAAAGAAAACCATTTTTT+GGG | - | chr7_1:1061402-1061421 | None:intergenic | 15.0% |
| !!! | AAAAAAAGAAAACCATTTTT+TGG | - | chr7_1:1061403-1061422 | None:intergenic | 15.0% |
| !!! | ATAAGTTGCATATTTTAATT+TGG | + | chr7_1:1061702-1061721 | Msa1003980:intron | 15.0% |
| !! | TAAATAAATGAATTAAACCA+AGG | - | chr7_1:1062797-1062816 | None:intergenic | 15.0% |
| !! | ATAGAGAAGAAAAAATTGAA+AGG | - | chr7_1:1056237-1056256 | None:intergenic | 20.0% |
| !!! | ATCATGTTTTTTTTTTTGGT+TGG | + | chr7_1:1056656-1056675 | Msa1003980:intron | 20.0% |
| !! | TTTAGAAATTGGATAAATGT+TGG | + | chr7_1:1056883-1056902 | Msa1003980:intron | 20.0% |
| !! | AAACTTAACCAAACATAATT+AGG | - | chr7_1:1057054-1057073 | None:intergenic | 20.0% |
| !! | CTTTACTATGAAATTCTAAT+GGG | - | chr7_1:1057129-1057148 | None:intergenic | 20.0% |
| !! | TCTTTACTATGAAATTCTAA+TGG | - | chr7_1:1057130-1057149 | None:intergenic | 20.0% |
| !! | AACTGTAGTATATTGTAAAT+TGG | + | chr7_1:1057859-1057878 | Msa1003980:intron | 20.0% |
| !! | ATACCTAAAGTACATTATAA+AGG | + | chr7_1:1057976-1057995 | Msa1003980:CDS | 20.0% |
| !! | AAAAAATAGTTAATTGGCTA+AGG | - | chr7_1:1058068-1058087 | None:intergenic | 20.0% |
| !! | ATTATATTATATGCAGGTTA+TGG | + | chr7_1:1058099-1058118 | Msa1003980:intron | 20.0% |
| !!! | TAACTAATCTTGTTTTAGTT+TGG | - | chr7_1:1058331-1058350 | None:intergenic | 20.0% |
| !!! | TTAGTTATATTTTGTATAGG+CGG | + | chr7_1:1058344-1058363 | Msa1003980:intron | 20.0% |
| !! | ATGATTTATGTAGAACATTA+TGG | + | chr7_1:1058387-1058406 | Msa1003980:intron | 20.0% |
| !! | ATTCAAAGAATTTACTTGAA+TGG | - | chr7_1:1058588-1058607 | None:intergenic | 20.0% |
| !! | AATGGATAAATAAGATATAG+AGG | - | chr7_1:1058694-1058713 | None:intergenic | 20.0% |
| !!! | AAAAGGAGCATATTAATTAT+TGG | - | chr7_1:1058735-1058754 | None:intergenic | 20.0% |
| !! | AAATCAATATACCAAACAAA+AGG | - | chr7_1:1058939-1058958 | None:intergenic | 20.0% |
| !! | TCCTTGTAAGATTAAAAAAA+GGG | - | chr7_1:1059147-1059166 | None:intergenic | 20.0% |
| !! | ATCCTTGTAAGATTAAAAAA+AGG | - | chr7_1:1059148-1059167 | None:intergenic | 20.0% |
| !! | GCTTCTTATATATATTCAAT+TGG | - | chr7_1:1060053-1060072 | None:intergenic | 20.0% |
| !! | TTAGATTAGACTAACATTAT+AGG | - | chr7_1:1060618-1060637 | None:intergenic | 20.0% |
| !! | TGATTTACTTGGTTAATATA+TGG | + | chr7_1:1060691-1060710 | Msa1003980:intron | 20.0% |
| !! | GATTTACTTGGTTAATATAT+GGG | + | chr7_1:1060692-1060711 | Msa1003980:intron | 20.0% |
| !! | AGTTTCAAAAAACTGAAAAT+AGG | - | chr7_1:1061148-1061167 | None:intergenic | 20.0% |
| !!! | TTTAAGTTAGTTAGGTAATT+AGG | + | chr7_1:1061365-1061384 | Msa1003980:intron | 20.0% |
| !! | TTAAGTTAGTTAGGTAATTA+GGG | + | chr7_1:1061366-1061385 | Msa1003980:intron | 20.0% |
| !! | TAATCTGTGATATGATATAA+TGG | + | chr7_1:1062162-1062181 | Msa1003980:intron | 20.0% |
| !!! | GTACAAAACATTTTGAATAA+AGG | - | chr7_1:1062218-1062237 | None:intergenic | 20.0% |
| !! | TTACTATTACTATTACTACA+TGG | + | chr7_1:1062257-1062276 | Msa1003980:intron | 20.0% |
| !! | TAAATTCTATCAAACTTTGT+TGG | - | chr7_1:1062369-1062388 | None:intergenic | 20.0% |
| !! | AATAATTGGTAGGTTGAATT+TGG | - | chr7_1:1056197-1056216 | None:intergenic | 25.0% |
| ! | GAAAAATTGAACAAACTCAT+AGG | - | chr7_1:1056616-1056635 | None:intergenic | 25.0% |
| !!! | TGAGTTTGTTCAATTTTTCA+TGG | + | chr7_1:1056617-1056636 | Msa1003980:intron | 25.0% |
| ! | CATTTAGTGTGTTAATTTCA+CGG | - | chr7_1:1056696-1056715 | None:intergenic | 25.0% |
| !!! | TATGGTAACTTGATTTTGAT+CGG | + | chr7_1:1056821-1056840 | Msa1003980:intron | 25.0% |
| ! | TAGGTGTTTATCAATCAAAT+TGG | - | chr7_1:1057035-1057054 | None:intergenic | 25.0% |
| ! | GATAAACACCTAATTATGTT+TGG | + | chr7_1:1057043-1057062 | Msa1003980:intron | 25.0% |
| ! | AGAATTTCATAGTAAAGAGA+TGG | + | chr7_1:1057132-1057151 | Msa1003980:intron | 25.0% |
| !! | ATTTTTGAATGATGTAACCA+TGG | + | chr7_1:1057438-1057457 | Msa1003980:intron | 25.0% |
| ! | AAGCACATATATATTAACCA+TGG | - | chr7_1:1057458-1057477 | None:intergenic | 25.0% |
| !! | TTGCTATCTTTTCATATTTC+AGG | + | chr7_1:1057721-1057740 | Msa1003980:intron | 25.0% |
| ! | TTTGAACATAGAAACAGTAA+AGG | + | chr7_1:1057755-1057774 | Msa1003980:CDS | 25.0% |
| ! | CTTCCTTTATAATGTACTTT+AGG | - | chr7_1:1057982-1058001 | None:intergenic | 25.0% |
| !!! | TTGGTTGTTTTTGTTGTAAA+TGG | + | chr7_1:1058454-1058473 | Msa1003980:intron | 25.0% |
| !! | TGATTGTCTTTTGAATATGT+AGG | + | chr7_1:1058808-1058827 | Msa1003980:intron | 25.0% |
| !!! | ATTGATTTAGTTGAGTTTTC+TGG | + | chr7_1:1058951-1058970 | Msa1003980:intron | 25.0% |
| !! | AAATTGTTTCTTGTTGATCT+CGG | + | chr7_1:1059070-1059089 | Msa1003980:CDS | 25.0% |
| ! | CCTTGTAAGATTAAAAAAAG+GGG | - | chr7_1:1059146-1059165 | None:intergenic | 25.0% |
| !!! | TTTTATTTTCAGCAACAAAG+TGG | + | chr7_1:1059167-1059186 | Msa1003980:intron | 25.0% |
| ! | TAAAAATATCCAACATCTTG+AGG | + | chr7_1:1059273-1059292 | Msa1003980:intron | 25.0% |
| !!! | ACTCTCATTTTTCTTCATAA+AGG | + | chr7_1:1059400-1059419 | Msa1003980:CDS | 25.0% |
| ! | ATACTGGATGAGAATAAAAA+AGG | - | chr7_1:1059460-1059479 | None:intergenic | 25.0% |
| ! | GGATTAAAACAAACATGTAA+TGG | - | chr7_1:1059502-1059521 | None:intergenic | 25.0% |
| ! | TGGTCAAATTAATGAAACAT+CGG | - | chr7_1:1060033-1060052 | None:intergenic | 25.0% |
| ! | GTACTTATGTAACATAGATT+CGG | - | chr7_1:1060164-1060183 | None:intergenic | 25.0% |
| ! | GAATCTATGTTACATAAGTA+CGG | + | chr7_1:1060163-1060182 | Msa1003980:intron | 25.0% |
| ! | AATCTATGTTACATAAGTAC+GGG | + | chr7_1:1060164-1060183 | Msa1003980:intron | 25.0% |
| ! | AGATAGTAAAACAGCATATA+AGG | - | chr7_1:1060593-1060612 | None:intergenic | 25.0% |
| !!! | GTTTTGTTATGATGATGTTA+TGG | + | chr7_1:1060875-1060894 | Msa1003980:intron | 25.0% |
| ! | TATTACATTACTTCTATAGC+TGG | + | chr7_1:1061225-1061244 | Msa1003980:CDS | 25.0% |
| ! | ATTACATTACTTCTATAGCT+GGG | + | chr7_1:1061226-1061245 | Msa1003980:CDS | 25.0% |
| !!! | ATACATTGTTTTTGAATACC+CGG | + | chr7_1:1061594-1061613 | Msa1003980:intron | 25.0% |
| ! | AATTTGAAAGTCTATTCACA+TGG | + | chr7_1:1061728-1061747 | Msa1003980:intron | 25.0% |
| ! | TAAAAAATTGAAAGTCACAC+AGG | - | chr7_1:1061845-1061864 | None:intergenic | 25.0% |
| !!! | AATTTTTTAGCAGATCTATC+TGG | + | chr7_1:1061856-1061875 | Msa1003980:intron | 25.0% |
| !! | TTCTTGTTTATCCATTTGAA+GGG | - | chr7_1:1062029-1062048 | None:intergenic | 25.0% |
| !! | AAAACATTTTGAATAAAGGC+AGG | - | chr7_1:1062214-1062233 | None:intergenic | 25.0% |
| ! | CTAGATAAGAGTTTAGAAAA+AGG | - | chr7_1:1062480-1062499 | None:intergenic | 25.0% |
| ! | AACAAGTCAATAACCATATT+GGG | - | chr7_1:1062539-1062558 | None:intergenic | 25.0% |
| !! | TCAAAACAATTCTTGTTTGT+TGG | + | chr7_1:1062609-1062628 | Msa1003980:intron | 25.0% |
| ! | TATTAAGAAATTGCAACTGT+AGG | + | chr7_1:1062667-1062686 | Msa1003980:intron | 25.0% |
| !!! | TGAGAAAAATCACTTTTTGA+AGG | - | chr7_1:1063198-1063217 | None:intergenic | 25.0% |
| ! | TTGATTCTGTTTATGTTTAC+AGG | + | chr7_1:1063218-1063237 | Msa1003980:intron | 25.0% |
| ! | GTTTATGTTTACAGGAAAAA+TGG | + | chr7_1:1063226-1063245 | Msa1003980:intron | 25.0% |
| ! | AATGTATAAGTTTGTGTGTA+AGG | + | chr7_1:1063458-1063477 | Msa1003980:intron | 25.0% |
| AATTTGGAGAATTAGGGTTA+GGG | - | chr7_1:1056181-1056200 | None:intergenic | 30.0% | |
| AGGTTGAATTTGGAGAATTA+GGG | - | chr7_1:1056187-1056206 | None:intergenic | 30.0% | |
| ! | TAGGTTGAATTTGGAGAATT+AGG | - | chr7_1:1056188-1056207 | None:intergenic | 30.0% |
| AAAAAAAGAGCTGAAGAAAC+CGG | + | chr7_1:1056436-1056455 | Msa1003980:five_prime_UTR | 30.0% | |
| AAGAGGTAGAAGAAATTGAA+GGG | + | chr7_1:1056495-1056514 | Msa1003980:five_prime_UTR | 30.0% | |
| !! | GATTTTGATCGGATAAATGT+TGG | + | chr7_1:1056832-1056851 | Msa1003980:intron | 30.0% |
| CTATGGAGAAGTTTAGAAAT+TGG | + | chr7_1:1056872-1056891 | Msa1003980:intron | 30.0% | |
| GTCTTACTAATAAGCTCAAA+AGG | + | chr7_1:1057308-1057327 | Msa1003980:intron | 30.0% | |
| ! | GAAGATTTTTGTATATGCGA+TGG | + | chr7_1:1057343-1057362 | Msa1003980:intron | 30.0% |
| GTCAAAACAAATTGAAGGAA+AGG | - | chr7_1:1057501-1057520 | None:intergenic | 30.0% | |
| TTTGGGTCAAAACAAATTGA+AGG | - | chr7_1:1057506-1057525 | None:intergenic | 30.0% | |
| !!! | TTCAATTTGTTTTGACCCAA+AGG | + | chr7_1:1057505-1057524 | Msa1003980:intron | 30.0% |
| TGTAACTTGGAACTTTAATG+TGG | + | chr7_1:1057669-1057688 | Msa1003980:intron | 30.0% | |
| TGGAACTTTAATGTGGTTAA+AGG | + | chr7_1:1057676-1057695 | Msa1003980:intron | 30.0% | |
| ! | CTATCTTTTCATATTTCAGG+TGG | + | chr7_1:1057724-1057743 | Msa1003980:intron | 30.0% |
| GTACATTATAAAGGAAGACA+AGG | + | chr7_1:1057985-1058004 | Msa1003980:CDS | 30.0% | |
| GAAGCAGATACAATCATAAA+AGG | - | chr7_1:1058185-1058204 | None:intergenic | 30.0% | |
| GTTAAGATTATATTGGAGTG+AGG | + | chr7_1:1058270-1058289 | Msa1003980:intron | 30.0% | |
| !!! | CTTGTTTTAGTTTGGTTAGA+TGG | - | chr7_1:1058323-1058342 | None:intergenic | 30.0% |
| ! | TATTTTGTATAGGCGGTTTT+TGG | + | chr7_1:1058351-1058370 | Msa1003980:intron | 30.0% |
| TATATCTAAGCCTTCTATTC+TGG | + | chr7_1:1058662-1058681 | Msa1003980:intron | 30.0% | |
| AAACCAGAAAGGGAAAAAAA+AGG | - | chr7_1:1058752-1058771 | None:intergenic | 30.0% | |
| GTTCATTATAGATATGTGCA+TGG | + | chr7_1:1058992-1059011 | Msa1003980:intron | 30.0% | |
| ! | AAACCAGAGAACTTTTTACT+AGG | + | chr7_1:1059022-1059041 | Msa1003980:CDS | 30.0% |
| !!! | GTGAGAAATTTTGTTTTTGC+CGG | + | chr7_1:1059120-1059139 | Msa1003980:intron | 30.0% |
| !!! | CCCCTTTTTTTAATCTTACA+AGG | + | chr7_1:1059143-1059162 | Msa1003980:intron | 30.0% |
| AAAGAAACCTGAACATATCA+GGG | - | chr7_1:1059234-1059253 | None:intergenic | 30.0% | |
| AAAAGAAACCTGAACATATC+AGG | - | chr7_1:1059235-1059254 | None:intergenic | 30.0% | |
| AAATATAAGCCTCAAGATGT+TGG | - | chr7_1:1059285-1059304 | None:intergenic | 30.0% | |
| !! | TCATTTTTCTTCATAAAGGC+CGG | + | chr7_1:1059404-1059423 | Msa1003980:CDS | 30.0% |
| CCTGTCAGAGAAATTAAAAA+CGG | - | chr7_1:1059523-1059542 | None:intergenic | 30.0% | |
| !!! | CGTTTTTAATTTCTCTGACA+GGG | + | chr7_1:1059521-1059540 | Msa1003980:intron | 30.0% |
| ! | TCTTGTTTGCAAAAAGAAGA+TGG | + | chr7_1:1059559-1059578 | Msa1003980:CDS | 30.0% |
| CTTGTTTGCAAAAAGAAGAT+GGG | + | chr7_1:1059560-1059579 | Msa1003980:CDS | 30.0% | |
| ! | GATATTAGCTTGGAATAGTT+AGG | - | chr7_1:1059674-1059693 | None:intergenic | 30.0% |
| ATCAAACAAGGATATTAGCT+TGG | - | chr7_1:1059684-1059703 | None:intergenic | 30.0% | |
| ! | TTATCACGCTTTTAAACCTT+TGG | + | chr7_1:1059800-1059819 | Msa1003980:intron | 30.0% |
| ! | TATCACGCTTTTAAACCTTT+GGG | + | chr7_1:1059801-1059820 | Msa1003980:intron | 30.0% |
| TTCCCAAATTGAAATTTACC+AGG | + | chr7_1:1059855-1059874 | Msa1003980:intron | 30.0% | |
| GACCTGGTAAATTTCAATTT+GGG | - | chr7_1:1059860-1059879 | None:intergenic | 30.0% | |
| CAAATTGAAATTTACCAGGT+CGG | + | chr7_1:1059859-1059878 | Msa1003980:intron | 30.0% | |
| AAATTGAAATTTACCAGGTC+GGG | + | chr7_1:1059860-1059879 | Msa1003980:intron | 30.0% | |
| GGACATCATTATGATAGATT+TGG | - | chr7_1:1060552-1060571 | None:intergenic | 30.0% | |
| TAGTAAAACAGCATATAAGG+TGG | - | chr7_1:1060590-1060609 | None:intergenic | 30.0% | |
| TAACACATGTCGTATAGATA+TGG | + | chr7_1:1060635-1060654 | Msa1003980:intron | 30.0% | |
| TGCACATGTCATATAGATAT+CGG | + | chr7_1:1060658-1060677 | Msa1003980:intron | 30.0% | |
| ATTTAACCATCTGATATGTC+TGG | + | chr7_1:1060733-1060752 | Msa1003980:intron | 30.0% | |
| TTTAACCATCTGATATGTCT+GGG | + | chr7_1:1060734-1060753 | Msa1003980:intron | 30.0% | |
| AAGTCAGATAAACAAACACA+AGG | - | chr7_1:1060797-1060816 | None:intergenic | 30.0% | |
| TTGTGTTTGTTTATCTGACT+TGG | + | chr7_1:1060796-1060815 | Msa1003980:intron | 30.0% | |
| TGTGTTTGTTTATCTGACTT+GGG | + | chr7_1:1060797-1060816 | Msa1003980:intron | 30.0% | |
| TGTTATGGTTTACTGAAAAG+TGG | + | chr7_1:1060890-1060909 | Msa1003980:intron | 30.0% | |
| TAGGTATCATTACAATGTAG+CGG | + | chr7_1:1060922-1060941 | Msa1003980:intron | 30.0% | |
| TCAACCTTGTGTAAGAAAAA+AGG | - | chr7_1:1061085-1061104 | None:intergenic | 30.0% | |
| ATAAAGAAGCAGAATTGGAT+GGG | - | chr7_1:1061173-1061192 | None:intergenic | 30.0% | |
| TATAAAGAAGCAGAATTGGA+TGG | - | chr7_1:1061174-1061193 | None:intergenic | 30.0% | |
| ATCCAATTCTGCTTCTTTAT+AGG | + | chr7_1:1061173-1061192 | Msa1003980:intron | 30.0% | |
| TTCCTATAAAGAAGCAGAAT+TGG | - | chr7_1:1061178-1061197 | None:intergenic | 30.0% | |
| ATTCTGCTTCTTTATAGGAA+TGG | + | chr7_1:1061178-1061197 | Msa1003980:intron | 30.0% | |
| TTCTTTATAGGAATGGATCA+TGG | + | chr7_1:1061185-1061204 | Msa1003980:intron | 30.0% | |
| TTACATTACTTCTATAGCTG+GGG | + | chr7_1:1061227-1061246 | Msa1003980:CDS | 30.0% | |
| ATCCAATGTTGATGCATTTA+CGG | - | chr7_1:1061330-1061349 | None:intergenic | 30.0% | |
| ATCAACATTGGATCCAATTT+CGG | + | chr7_1:1061337-1061356 | Msa1003980:intron | 30.0% | |
| !! | TGGCGTTTTGAATATACTAA+TGG | - | chr7_1:1061427-1061446 | None:intergenic | 30.0% |
| TGCTCAAATTTCAGAGATAT+GGG | - | chr7_1:1061484-1061503 | None:intergenic | 30.0% | |
| !! | ATATCTCTGAAATTTGAGCA+GGG | + | chr7_1:1061484-1061503 | Msa1003980:intron | 30.0% |
| AATTTCCCATTTAGTGTAGA+GGG | - | chr7_1:1061552-1061571 | None:intergenic | 30.0% | |
| TAATTTCCCATTTAGTGTAG+AGG | - | chr7_1:1061553-1061572 | None:intergenic | 30.0% | |
| !! | GATTGTTGATTCAATAAGCT+TGG | + | chr7_1:1061657-1061676 | Msa1003980:intron | 30.0% |
| TCTCTGCTTTAATACTATAG+AGG | + | chr7_1:1061911-1061930 | Msa1003980:intron | 30.0% | |
| CTCTGCTTTAATACTATAGA+GGG | + | chr7_1:1061912-1061931 | Msa1003980:intron | 30.0% | |
| !! | AACTTCATTGTGATTTGTTC+TGG | + | chr7_1:1061950-1061969 | Msa1003980:intron | 30.0% |
| ! | TCTTGTTTATCCATTTGAAG+GGG | - | chr7_1:1062028-1062047 | None:intergenic | 30.0% |
| ! | CTTCTTGTTTATCCATTTGA+AGG | - | chr7_1:1062030-1062049 | None:intergenic | 30.0% |
| TCAAATGGATAAACAAGAAG+TGG | + | chr7_1:1062030-1062049 | Msa1003980:CDS | 30.0% | |
| CACCAGTTTGATATATTACT+CGG | - | chr7_1:1062297-1062316 | None:intergenic | 30.0% | |
| AACAAACCAAGCTAGAAAAT+AGG | - | chr7_1:1062403-1062422 | None:intergenic | 30.0% | |
| !! | TAGCTTGGTTTGTTGAAATT+GGG | + | chr7_1:1062409-1062428 | Msa1003980:intron | 30.0% |
| GATAAGAGTTTAGAAAAAGG+AGG | - | chr7_1:1062477-1062496 | None:intergenic | 30.0% | |
| ACAAGTCAATAACCATATTG+GGG | - | chr7_1:1062538-1062557 | None:intergenic | 30.0% | |
| CAACAAGTCAATAACCATAT+TGG | - | chr7_1:1062540-1062559 | None:intergenic | 30.0% | |
| !! | CAATATGGTTATTGACTTGT+TGG | + | chr7_1:1062538-1062557 | Msa1003980:intron | 30.0% |
| CCAATAAACAATAGTGCTAT+GGG | - | chr7_1:1062751-1062770 | None:intergenic | 30.0% | |
| AACTAATGAAGTGAAGGAAA+AGG | - | chr7_1:1062774-1062793 | None:intergenic | 30.0% | |
| CTCTTATATTAAGCAAACCA+AGG | + | chr7_1:1063068-1063087 | Msa1003980:CDS | 30.0% | |
| ATTGTTCCCTTTACAAATGA+GGG | + | chr7_1:1063388-1063407 | Msa1003980:intron | 30.0% | |
| GAATTTGGAGAATTAGGGTT+AGG | - | chr7_1:1056182-1056201 | None:intergenic | 35.0% | |
| ! | TTGGATTTTTCACAGCTTAC+CGG | - | chr7_1:1056390-1056409 | None:intergenic | 35.0% |
| GGCTCAAATATCTCAATAAC+CGG | - | chr7_1:1056458-1056477 | None:intergenic | 35.0% | |
| GATATTTGAGCCTGATAACT+TGG | + | chr7_1:1056466-1056485 | Msa1003980:five_prime_UTR | 35.0% | |
| TCTTCTCTTACCAAGTTATC+AGG | - | chr7_1:1056479-1056498 | None:intergenic | 35.0% | |
| TGATAACTTGGTAAGAGAAG+AGG | + | chr7_1:1056478-1056497 | Msa1003980:five_prime_UTR | 35.0% | |
| GAAGAGGTAGAAGAAATTGA+AGG | + | chr7_1:1056494-1056513 | Msa1003980:five_prime_UTR | 35.0% | |
| AGAGGTAGAAGAAATTGAAG+GGG | + | chr7_1:1056496-1056515 | Msa1003980:five_prime_UTR | 35.0% | |
| !! | TAATAAAGGTGTTGCTCAAG+AGG | + | chr7_1:1056550-1056569 | Msa1003980:CDS | 35.0% |
| ACACTAAATGCAGAGAAGTA+GGG | + | chr7_1:1056706-1056725 | Msa1003980:intron | 35.0% | |
| TGTAGGAACAATTGATATGC+TGG | - | chr7_1:1056748-1056767 | None:intergenic | 35.0% | |
| AACATGTAGTCAAGAGAGTT+TGG | + | chr7_1:1056767-1056786 | Msa1003980:intron | 35.0% | |
| TCATACAAGCACTAATGCAT+CGG | + | chr7_1:1057101-1057120 | Msa1003980:intron | 35.0% | |
| CTGAACAAGTGTTCATAAGT+GGG | + | chr7_1:1057156-1057175 | Msa1003980:intron | 35.0% | |
| TGAACAAGTGTTCATAAGTG+GGG | + | chr7_1:1057157-1057176 | Msa1003980:intron | 35.0% | |
| CTAAAACAACCCCAAAAAAC+CGG | - | chr7_1:1057201-1057220 | None:intergenic | 35.0% | |
| !!! | GGTTTTTTGGGGTTGTTTTA+GGG | + | chr7_1:1057200-1057219 | Msa1003980:intron | 35.0% |
| !!! | GTTTTTTGGGGTTGTTTTAG+GGG | + | chr7_1:1057201-1057220 | Msa1003980:intron | 35.0% |
| !!! | TTTTGGGTTCCAAAAGTGTT+GGG | - | chr7_1:1057271-1057290 | None:intergenic | 35.0% |
| !!! | TTTTTGGGTTCCAAAAGTGT+TGG | - | chr7_1:1057272-1057291 | None:intergenic | 35.0% |
| ! | TGTGGTTAAAGGATTTTCGT+TGG | + | chr7_1:1057687-1057706 | Msa1003980:intron | 35.0% |
| AACAGTAAAGGTTGCAACTA+TGG | + | chr7_1:1057767-1057786 | Msa1003980:CDS | 35.0% | |
| TATGTACAAGTTTCGTGAAG+AGG | + | chr7_1:1057890-1057909 | Msa1003980:intron | 35.0% | |
| !!! | ATTTTGTTTTGAAGCACCCT+TGG | + | chr7_1:1057940-1057959 | Msa1003980:intron | 35.0% |
| ACAAGGAGAATATTACGTGA+TGG | + | chr7_1:1058002-1058021 | Msa1003980:CDS | 35.0% | |
| CTCACTGACAAAGAAGAAAA+TGG | - | chr7_1:1058712-1058731 | None:intergenic | 35.0% | |
| AGACAAACACAAACCAGAAA+GGG | - | chr7_1:1058762-1058781 | None:intergenic | 35.0% | |
| AAGACAAACACAAACCAGAA+AGG | - | chr7_1:1058763-1058782 | None:intergenic | 35.0% | |
| ! | CTTGTATTCAGCCTTTTGTT+TGG | + | chr7_1:1058925-1058944 | Msa1003980:intron | 35.0% |
| TGACCTAGTAAAAAGTTCTC+TGG | - | chr7_1:1059028-1059047 | None:intergenic | 35.0% | |
| TTTCTTGTTGATCTCGGATT+AGG | + | chr7_1:1059076-1059095 | Msa1003980:CDS | 35.0% | |
| GTAAGATTAAAAAAAGGGGC+CGG | - | chr7_1:1059142-1059161 | None:intergenic | 35.0% | |
| TTCTCATCCAGTATTTACTG+TGG | + | chr7_1:1059466-1059485 | Msa1003980:intron | 35.0% | |
| !!! | CCGTTTTTAATTTCTCTGAC+AGG | + | chr7_1:1059520-1059539 | Msa1003980:intron | 35.0% |
| AACTCAAGGAAATGTCTGAA+AGG | - | chr7_1:1059623-1059642 | None:intergenic | 35.0% | |
| TCATGTTCACTACAAACTCA+AGG | - | chr7_1:1059637-1059656 | None:intergenic | 35.0% | |
| TGAGCACCTTCAGTATTAAT+TGG | - | chr7_1:1059737-1059756 | None:intergenic | 35.0% | |
| !! | TAATACTGAAGGTGCTCAAA+AGG | + | chr7_1:1059739-1059758 | Msa1003980:CDS | 35.0% |
| ATTTGGGAAACAGATGATCA+TGG | - | chr7_1:1059844-1059863 | None:intergenic | 35.0% | |
| CGACCTGGTAAATTTCAATT+TGG | - | chr7_1:1059861-1059880 | None:intergenic | 35.0% | |
| GAGAGGTAGATTGAATATTG+AGG | + | chr7_1:1059888-1059907 | Msa1003980:CDS | 35.0% | |
| TGATTCACAGCCTAAAAAGA+AGG | + | chr7_1:1059918-1059937 | Msa1003980:CDS | 35.0% | |
| CCTAAAAAGAAGGTTCGTTT+GGG | + | chr7_1:1059928-1059947 | Msa1003980:CDS | 35.0% | |
| CTAAAAAGAAGGTTCGTTTG+GGG | + | chr7_1:1059929-1059948 | Msa1003980:CDS | 35.0% | |
| TAAAAAGAAGGTTCGTTTGG+GGG | + | chr7_1:1059930-1059949 | Msa1003980:CDS | 35.0% | |
| ATTGATATCCATTGTGTAGC+AGG | - | chr7_1:1059958-1059977 | None:intergenic | 35.0% | |
| CTTATGTAACATAGATTCGG+AGG | - | chr7_1:1060161-1060180 | None:intergenic | 35.0% | |
| ATGTTACATAAGTACGGGTA+CGG | + | chr7_1:1060169-1060188 | Msa1003980:intron | 35.0% | |
| AAATTGCCATATTCTCGTAC+CGG | - | chr7_1:1060222-1060241 | None:intergenic | 35.0% | |
| AAGCATGAGTGCTTGTAAAA+AGG | - | chr7_1:1060522-1060541 | None:intergenic | 35.0% | |
| AAACAGCATATAAGGTGGTT+CGG | - | chr7_1:1060585-1060604 | None:intergenic | 35.0% | |
| AGTAAAACGTATCTACTGCT+TGG | + | chr7_1:1060850-1060869 | Msa1003980:intron | 35.0% | |
| GTAAAACGTATCTACTGCTT+GGG | + | chr7_1:1060851-1060870 | Msa1003980:intron | 35.0% | |
| ! | TATCATTACAATGTAGCGGA+TGG | + | chr7_1:1060926-1060945 | Msa1003980:CDS | 35.0% |
| AAGCCACACAACTAATAAGA+AGG | - | chr7_1:1060991-1061010 | None:intergenic | 35.0% | |
| !!! | GTCACCTTTTTTCTTACACA+AGG | + | chr7_1:1061078-1061097 | Msa1003980:CDS | 35.0% |
| TCAACATTGGATCCAATTTC+GGG | + | chr7_1:1061338-1061357 | Msa1003980:intron | 35.0% | |
| AACGCCAGTAAACTATGATA+AGG | + | chr7_1:1061440-1061459 | Msa1003980:intron | 35.0% | |
| ACGCCAGTAAACTATGATAA+GGG | + | chr7_1:1061441-1061460 | Msa1003980:intron | 35.0% | |
| ATGCCCTTATCATAGTTTAC+TGG | - | chr7_1:1061447-1061466 | None:intergenic | 35.0% | |
| CTGCTCAAATTTCAGAGATA+TGG | - | chr7_1:1061485-1061504 | None:intergenic | 35.0% | |
| !! | CATATCTCTGAAATTTGAGC+AGG | + | chr7_1:1061483-1061502 | Msa1003980:intron | 35.0% |
| !! | TATCTCTGAAATTTGAGCAG+GGG | + | chr7_1:1061485-1061504 | Msa1003980:intron | 35.0% |
| ACCTCTTGTTGCTAATTTCA+TGG | + | chr7_1:1061523-1061542 | Msa1003980:intron | 35.0% | |
| ACCATGAAATTAGCAACAAG+AGG | - | chr7_1:1061527-1061546 | None:intergenic | 35.0% | |
| ATTTCCCATTTAGTGTAGAG+GGG | - | chr7_1:1061551-1061570 | None:intergenic | 35.0% | |
| TCTGTAGGATCCACATAAAT+GGG | + | chr7_1:1061620-1061639 | Msa1003980:intron | 35.0% | |
| TCCAATTTCCTGTACAAGTA+TGG | + | chr7_1:1061793-1061812 | Msa1003980:intron | 35.0% | |
| TTGTTTGTTCACTTGCATGA+GGG | + | chr7_1:1061882-1061901 | Msa1003980:intron | 35.0% | |
| ATAAACAAGAAGTGGAGAGA+AGG | + | chr7_1:1062038-1062057 | Msa1003980:CDS | 35.0% | |
| ATTACTATTACTACATGGCC+TGG | + | chr7_1:1062262-1062281 | Msa1003980:intron | 35.0% | |
| CTCCGAGTAATATATCAAAC+TGG | + | chr7_1:1062292-1062311 | Msa1003980:intron | 35.0% | |
| GGATTGGATCAGTAATTTAG+TGG | + | chr7_1:1062334-1062353 | Msa1003980:intron | 35.0% | |
| TCTATCAAACTTTGTTGGCA+GGG | - | chr7_1:1062364-1062383 | None:intergenic | 35.0% | |
| TTCTATCAAACTTTGTTGGC+AGG | - | chr7_1:1062365-1062384 | None:intergenic | 35.0% | |
| !! | GCTAGAAAATAGGTGGATTT+TGG | - | chr7_1:1062393-1062412 | None:intergenic | 35.0% |
| !!! | AATCCACCTATTTTCTAGCT+TGG | + | chr7_1:1062394-1062413 | Msa1003980:intron | 35.0% |
| AAACCAAGCTAGAAAATAGG+TGG | - | chr7_1:1062400-1062419 | None:intergenic | 35.0% | |
| !! | CTAGCTTGGTTTGTTGAAAT+TGG | + | chr7_1:1062408-1062427 | Msa1003980:intron | 35.0% |
| ! | CTGATTTTGTAAGGATGAGT+TGG | - | chr7_1:1062436-1062455 | None:intergenic | 35.0% |
| !! | CCTTACAAGCTGATTTTGTA+AGG | - | chr7_1:1062445-1062464 | None:intergenic | 35.0% |
| CCTTACAAAATCAGCTTGTA+AGG | + | chr7_1:1062442-1062461 | Msa1003980:intron | 35.0% | |
| CAAGTCAATAACCATATTGG+GGG | - | chr7_1:1062537-1062556 | None:intergenic | 35.0% | |
| !! | TGACTTGTTGGATAGATCAT+AGG | + | chr7_1:1062550-1062569 | Msa1003980:intron | 35.0% |
| !! | GACTTGTTGGATAGATCATA+GGG | + | chr7_1:1062551-1062570 | Msa1003980:intron | 35.0% |
| ! | ACTTGTTGGATAGATCATAG+GGG | + | chr7_1:1062552-1062571 | Msa1003980:intron | 35.0% |
| TCCTCTTATTGAACTCATTC+TGG | + | chr7_1:1062580-1062599 | Msa1003980:intron | 35.0% | |
| ACCAGAATGAGTTCAATAAG+AGG | - | chr7_1:1062584-1062603 | None:intergenic | 35.0% | |
| AACTAGTGAAGTGAAGGAAA+AGG | - | chr7_1:1062635-1062654 | None:intergenic | 35.0% | |
| ! | TTGGGTTGTTAAGCATTGTA+AGG | + | chr7_1:1062698-1062717 | Msa1003980:intron | 35.0% |
| CCCATAGCACTATTGTTTAT+TGG | + | chr7_1:1062748-1062767 | Msa1003980:intron | 35.0% | |
| GCCAATAAACAATAGTGCTA+TGG | - | chr7_1:1062752-1062771 | None:intergenic | 35.0% | |
| ! | ATCATCCACGTTTTATCTGT+AGG | + | chr7_1:1062946-1062965 | Msa1003980:intron | 35.0% |
| AACAACCTACAGATAAAACG+TGG | - | chr7_1:1062954-1062973 | None:intergenic | 35.0% | |
| ATTTCCAAGCACACATGTTA+AGG | + | chr7_1:1063135-1063154 | Msa1003980:CDS | 35.0% | |
| AAGCACACATGTTAAGGTTA+GGG | + | chr7_1:1063141-1063160 | Msa1003980:intron | 35.0% | |
| GCTATTTGACAACACTGAAA+GGG | - | chr7_1:1063305-1063324 | None:intergenic | 35.0% | |
| CTTTCAGTGTTGTCAAATAG+CGG | + | chr7_1:1063304-1063323 | Msa1003980:intron | 35.0% | |
| CATTGTTCCCTTTACAAATG+AGG | + | chr7_1:1063387-1063406 | Msa1003980:intron | 35.0% | |
| ! | GGATGCGACGAATTTTGAAT+TGG | - | chr7_1:1056149-1056168 | None:intergenic | 40.0% |
| GAACACATGCAGTAGATTTG+TGG | - | chr7_1:1056338-1056357 | None:intergenic | 40.0% | |
| AGAAGAAATTGAAGGGGTGA+TGG | + | chr7_1:1056502-1056521 | Msa1003980:exon | 40.0% | |
| GAAGAAATTGAAGGGGTGAT+GGG | + | chr7_1:1056503-1056522 | Msa1003980:exon | 40.0% | |
| GGTGGTTTGAGTGCTAATAA+AGG | + | chr7_1:1056536-1056555 | Msa1003980:CDS | 40.0% | |
| CACACTAAATGCAGAGAAGT+AGG | + | chr7_1:1056705-1056724 | Msa1003980:intron | 40.0% | |
| TGCAGAGAAGTAGGGATAAA+TGG | + | chr7_1:1056714-1056733 | Msa1003980:intron | 40.0% | |
| GCAGAGAAGTAGGGATAAAT+GGG | + | chr7_1:1056715-1056734 | Msa1003980:intron | 40.0% | |
| CTCTCTTGACTACATGTTGT+AGG | - | chr7_1:1056765-1056784 | None:intergenic | 40.0% | |
| CCACTTATGAACACTTGTTC+AGG | - | chr7_1:1057158-1057177 | None:intergenic | 40.0% | |
| CCTGAACAAGTGTTCATAAG+TGG | + | chr7_1:1057155-1057174 | Msa1003980:intron | 40.0% | |
| GAACAAGTGTTCATAAGTGG+GGG | + | chr7_1:1057158-1057177 | Msa1003980:intron | 40.0% | |
| !!! | CGGTTTTTTGGGGTTGTTTT+AGG | + | chr7_1:1057199-1057218 | Msa1003980:intron | 40.0% |
| TTTGACCCAAAGGTTCAAGT+AGG | + | chr7_1:1057515-1057534 | Msa1003980:intron | 40.0% | |
| AACCTCCTACTTGAACCTTT+GGG | - | chr7_1:1057523-1057542 | None:intergenic | 40.0% | |
| TTCCTCTCCACTTTGAACAT+AGG | - | chr7_1:1057548-1057567 | None:intergenic | 40.0% | |
| TTCAAAGTGGAGAGGAAACT+TGG | + | chr7_1:1057551-1057570 | Msa1003980:CDS | 40.0% | |
| ! | AAACTTGGCAAAGGTGGATT+TGG | + | chr7_1:1057566-1057585 | Msa1003980:CDS | 40.0% |
| ! | GGATTTGGACAGGTTTTTGT+TGG | + | chr7_1:1057581-1057600 | Msa1003980:CDS | 40.0% |
| ATTAAGACGGTCATTACCAC+CGG | - | chr7_1:1057618-1057637 | None:intergenic | 40.0% | |
| TATTCCATGACTTCCACCAA+GGG | - | chr7_1:1057959-1057978 | None:intergenic | 40.0% | |
| !!! | TGTATAGGCGGTTTTTGGTT+TGG | + | chr7_1:1058356-1058375 | Msa1003980:intron | 40.0% |
| ACTAAGTAGAATCCGCTACT+TGG | - | chr7_1:1058424-1058443 | None:intergenic | 40.0% | |
| !! | AAGTAGCGGATTCTACTTAG+TGG | + | chr7_1:1058423-1058442 | Msa1003980:intron | 40.0% |
| !! | AGTAGCGGATTCTACTTAGT+GGG | + | chr7_1:1058424-1058443 | Msa1003980:intron | 40.0% |
| GGATTCTACTTAGTGGGATA+AGG | + | chr7_1:1058430-1058449 | Msa1003980:intron | 40.0% | |
| !!! | GCTCCTTTTTTTTCCCTTTC+TGG | + | chr7_1:1058746-1058765 | Msa1003980:intron | 40.0% |
| ! | AACTTTTTACTAGGTCAGCC+AGG | + | chr7_1:1059031-1059050 | Msa1003980:CDS | 40.0% |
| ATATTCAACATGCTGACCAG+TGG | - | chr7_1:1059203-1059222 | None:intergenic | 40.0% | |
| TGCAAGTGTTCATGCTCATT+TGG | + | chr7_1:1059333-1059352 | Msa1003980:CDS | 40.0% | |
| GCAAGTGTTCATGCTCATTT+GGG | + | chr7_1:1059334-1059353 | Msa1003980:CDS | 40.0% | |
| GGAAATGTCTGAAAGGAGTA+GGG | - | chr7_1:1059616-1059635 | None:intergenic | 40.0% | |
| AGGAAATGTCTGAAAGGAGT+AGG | - | chr7_1:1059617-1059636 | None:intergenic | 40.0% | |
| !! | TCCTTGTTTGATAGTGTGCT+TGG | + | chr7_1:1059692-1059711 | Msa1003980:CDS | 40.0% |
| TCCAAGCACACTATCAAACA+AGG | - | chr7_1:1059696-1059715 | None:intergenic | 40.0% | |
| AGGTGCTCAAAAGGTAATGA+TGG | + | chr7_1:1059748-1059767 | Msa1003980:intron | 40.0% | |
| GCCTAAAAAGAAGGTTCGTT+TGG | + | chr7_1:1059927-1059946 | Msa1003980:CDS | 40.0% | |
| ! | CCCAAACGAACCTTCTTTTT+AGG | - | chr7_1:1059931-1059950 | None:intergenic | 40.0% |
| CAAGAATGCCAATGAAGCAA+AGG | + | chr7_1:1059986-1060005 | Msa1003980:CDS | 40.0% | |
| CATCTCTACCTTTGCTTCAT+TGG | - | chr7_1:1059997-1060016 | None:intergenic | 40.0% | |
| ! | GTGTCTTGCTGTGATTTACT+TGG | + | chr7_1:1060680-1060699 | Msa1003980:intron | 40.0% |
| TGAAAAGTGGCTGTACTGTT+AGG | + | chr7_1:1060903-1060922 | Msa1003980:intron | 40.0% | |
| CATAATAAGTGCCCAGAGAT+TGG | - | chr7_1:1061020-1061039 | None:intergenic | 40.0% | |
| CAATCTCTGGGCACTTATTA+TGG | + | chr7_1:1061018-1061037 | Msa1003980:CDS | 40.0% | |
| CTTATTATGGATGCTGGAAC+TGG | + | chr7_1:1061031-1061050 | Msa1003980:CDS | 40.0% | |
| TCTATAGCTGGGGTTACTAA+TGG | + | chr7_1:1061237-1061256 | Msa1003980:CDS | 40.0% | |
| CTATAGCTGGGGTTACTAAT+GGG | + | chr7_1:1061238-1061257 | Msa1003980:CDS | 40.0% | |
| ! | TCTCTTGTGGTGATGTCAAA+AGG | + | chr7_1:1061264-1061283 | Msa1003980:CDS | 40.0% |
| CTCCGTAAATGCATCAACAT+TGG | + | chr7_1:1061325-1061344 | Msa1003980:intron | 40.0% | |
| CAACATTGGATCCAATTTCG+GGG | + | chr7_1:1061339-1061358 | Msa1003980:intron | 40.0% | |
| AACATTGGATCCAATTTCGG+GGG | + | chr7_1:1061340-1061359 | Msa1003980:intron | 40.0% | |
| AACTTAAAGACCCCCGAAAT+TGG | - | chr7_1:1061353-1061372 | None:intergenic | 40.0% | |
| GTCTCTGTGTTCCCAAAAAA+TGG | + | chr7_1:1061388-1061407 | Msa1003980:intron | 40.0% | |
| GTCTGTAGGATCCACATAAA+TGG | + | chr7_1:1061619-1061638 | Msa1003980:intron | 40.0% | |
| ATCCACATAAATGGGAGTGA+GGG | + | chr7_1:1061628-1061647 | Msa1003980:intron | 40.0% | |
| CTTGTACAGGAAATTGGAAC+AGG | - | chr7_1:1061791-1061810 | None:intergenic | 40.0% | |
| GCCATACTTGTACAGGAAAT+TGG | - | chr7_1:1061797-1061816 | None:intergenic | 40.0% | |
| GTTGTTTGTTCACTTGCATG+AGG | + | chr7_1:1061881-1061900 | Msa1003980:intron | 40.0% | |
| !! | TGATTTGTTCTGGTTTCCAC+AGG | + | chr7_1:1061960-1061979 | Msa1003980:intron | 40.0% |
| ! | AGGTTTTCACGTGACTTCAA+TGG | + | chr7_1:1062058-1062077 | Msa1003980:CDS | 40.0% |
| ATTACTGATCCAATCCAGAG+AGG | - | chr7_1:1062330-1062349 | None:intergenic | 40.0% | |
| CAAAATCAGCTTGTAAGGTG+AGG | + | chr7_1:1062447-1062466 | Msa1003980:intron | 40.0% | |
| AGAGTCCTATCTTTCCAACA+CGG | + | chr7_1:1062498-1062517 | Msa1003980:intron | 40.0% | |
| !!! | CTTGGTTTTTTCCCCCAATA+TGG | + | chr7_1:1062523-1062542 | Msa1003980:intron | 40.0% |
| TCCTTCACTTCACTAGTTCA+AGG | + | chr7_1:1062637-1062656 | Msa1003980:intron | 40.0% | |
| ACCTTGAACTAGTGAAGTGA+AGG | - | chr7_1:1062641-1062660 | None:intergenic | 40.0% | |
| !! | CAACTGTAGGAAGCACTATT+GGG | + | chr7_1:1062680-1062699 | Msa1003980:intron | 40.0% |
| GTGCTATGGGACAGTATTAT+GGG | - | chr7_1:1062738-1062757 | None:intergenic | 40.0% | |
| AGTGCTATGGGACAGTATTA+TGG | - | chr7_1:1062739-1062758 | None:intergenic | 40.0% | |
| CCAAGGAACTAATGAAGTGA+AGG | - | chr7_1:1062780-1062799 | None:intergenic | 40.0% | |
| CCTTCACTTCATTAGTTCCT+TGG | + | chr7_1:1062777-1062796 | Msa1003980:intron | 40.0% | |
| ATCCATAGACGATGGGATAA+TGG | + | chr7_1:1063004-1063023 | Msa1003980:CDS | 40.0% | |
| AACCATTATCCCATCGTCTA+TGG | - | chr7_1:1063009-1063028 | None:intergenic | 40.0% | |
| ACGAAACTCAGGAAACTCTT+CGG | + | chr7_1:1063104-1063123 | Msa1003980:CDS | 40.0% | |
| CTAACCTTAACATGTGTGCT+TGG | - | chr7_1:1063142-1063161 | None:intergenic | 40.0% | |
| CAAGCACACATGTTAAGGTT+AGG | + | chr7_1:1063140-1063159 | Msa1003980:intron | 40.0% | |
| CGCTATTTGACAACACTGAA+AGG | - | chr7_1:1063306-1063325 | None:intergenic | 40.0% | |
| TTCCCTTTACAAATGAGGGA+GGG | + | chr7_1:1063392-1063411 | Msa1003980:intron | 40.0% | |
| TACCCTCCCTCATTTGTAAA+GGG | - | chr7_1:1063397-1063416 | None:intergenic | 40.0% | |
| ATACCCTCCCTCATTTGTAA+AGG | - | chr7_1:1063398-1063417 | None:intergenic | 40.0% | |
| TTAGGGTTAGGGTTTGATGC+AGG | - | chr7_1:1056170-1056189 | None:intergenic | 45.0% | |
| AATCAACGCACACGATGATC+AGG | + | chr7_1:1056296-1056315 | Msa1003980:five_prime_UTR | 45.0% | |
| CACATGCAGTAGATTTGTGG+CGG | - | chr7_1:1056335-1056354 | None:intergenic | 45.0% | |
| ! | ATACTACCCCTTTTCCTGAG+AGG | + | chr7_1:1056582-1056601 | Msa1003980:CDS | 45.0% |
| ! | TACTACCCCTTTTCCTGAGA+GGG | + | chr7_1:1056583-1056602 | Msa1003980:CDS | 45.0% |
| ACATACCCTCTCAGGAAAAG+GGG | - | chr7_1:1056591-1056610 | None:intergenic | 45.0% | |
| CACATACCCTCTCAGGAAAA+GGG | - | chr7_1:1056592-1056611 | None:intergenic | 45.0% | |
| ACACATACCCTCTCAGGAAA+AGG | - | chr7_1:1056593-1056612 | None:intergenic | 45.0% | |
| AAAAAACCGGTTGTGAGGTG+AGG | - | chr7_1:1057188-1057207 | None:intergenic | 45.0% | |
| !!! | TCACCTCACAACCGGTTTTT+TGG | + | chr7_1:1057187-1057206 | Msa1003980:intron | 45.0% |
| !!! | CACCTCACAACCGGTTTTTT+GGG | + | chr7_1:1057188-1057207 | Msa1003980:intron | 45.0% |
| !!! | ACCTCACAACCGGTTTTTTG+GGG | + | chr7_1:1057189-1057208 | Msa1003980:intron | 45.0% |
| TTAGGGGCGAAACTAGAACT+AGG | + | chr7_1:1057217-1057236 | Msa1003980:intron | 45.0% | |
| GGCGAAACTAGAACTAGGAT+GGG | + | chr7_1:1057222-1057241 | Msa1003980:intron | 45.0% | |
| !! | GTTCCAAAAGTGTTGGGATG+AGG | - | chr7_1:1057265-1057284 | None:intergenic | 45.0% |
| GAACCTCCTACTTGAACCTT+TGG | - | chr7_1:1057524-1057543 | None:intergenic | 45.0% | |
| AGGTTCGCCTATGTTCAAAG+TGG | + | chr7_1:1057538-1057557 | Msa1003980:CDS | 45.0% | |
| TTTGTTGGTCGTCGAGTAAC+CGG | + | chr7_1:1057596-1057615 | Msa1003980:CDS | 45.0% | |
| ! | GGTGGTAATGACCGTCTTAA+TGG | + | chr7_1:1057617-1057636 | Msa1003980:CDS | 45.0% |
| GTATGCTGAGGGTTGTAACT+TGG | + | chr7_1:1057656-1057675 | Msa1003980:intron | 45.0% | |
| TTGTACACTTGCCACTCGTA+AGG | - | chr7_1:1057797-1057816 | None:intergenic | 45.0% | |
| !!! | TTGTTTTGAAGCACCCTTGG+TGG | + | chr7_1:1057943-1057962 | Msa1003980:intron | 45.0% |
| GTATTCCATGACTTCCACCA+AGG | - | chr7_1:1057960-1057979 | None:intergenic | 45.0% | |
| ATGCAGGTTATGGACATGCT+TGG | + | chr7_1:1058109-1058128 | Msa1003980:intron | 45.0% | |
| TTCCAAACATCCCACAAGCT+TGG | - | chr7_1:1058136-1058155 | None:intergenic | 45.0% | |
| ! | TGGGATGTTTGGAATACCAC+AGG | + | chr7_1:1058142-1058161 | Msa1003980:CDS | 45.0% |
| AAAAGGCTTATACTCACGCC+TGG | - | chr7_1:1058168-1058187 | None:intergenic | 45.0% | |
| CTACTTAGTGGGATAAGGCT+TGG | + | chr7_1:1058435-1058454 | Msa1003980:intron | 45.0% | |
| ATGTAGGATGTCTGCCGAAA+TGG | + | chr7_1:1058824-1058843 | Msa1003980:intron | 45.0% | |
| AGCAATGCATGCCACCATTT+CGG | - | chr7_1:1058841-1058860 | None:intergenic | 45.0% | |
| TGTGGAGTCATTGTCGATCT+TGG | + | chr7_1:1058860-1058879 | Msa1003980:CDS | 45.0% | |
| TCTTGGAGAAGATGCACTCA+AGG | + | chr7_1:1058877-1058896 | Msa1003980:CDS | 45.0% | |
| CTTGGAGAAGATGCACTCAA+GGG | + | chr7_1:1058878-1058897 | Msa1003980:CDS | 45.0% | |
| TTGGAGAAGATGCACTCAAG+GGG | + | chr7_1:1058879-1058898 | Msa1003980:CDS | 45.0% | |
| TTCTTCTCTTGTGCTGTACC+TGG | - | chr7_1:1059052-1059071 | None:intergenic | 45.0% | |
| GTGTTCATGCTCATTTGGGA+AGG | + | chr7_1:1059338-1059357 | Msa1003980:CDS | 45.0% | |
| TTCATAAAGGCCGGTTACCA+TGG | + | chr7_1:1059413-1059432 | Msa1003980:CDS | 45.0% | |
| GATAACCTTGCCATGGTAAC+CGG | - | chr7_1:1059426-1059445 | None:intergenic | 45.0% | |
| GTTACCATGGCAAGGTTATC+AGG | + | chr7_1:1059426-1059445 | Msa1003980:CDS | 45.0% | |
| CCAATCGCCACAGTAAATAC+TGG | - | chr7_1:1059476-1059495 | None:intergenic | 45.0% | |
| CCAGTATTTACTGTGGCGAT+TGG | + | chr7_1:1059473-1059492 | Msa1003980:intron | 45.0% | |
| CTGCGGCCAATTAATACTGA+AGG | + | chr7_1:1059728-1059747 | Msa1003980:CDS | 45.0% | |
| ! | CACGCTTTTAAACCTTTGGG+TGG | + | chr7_1:1059804-1059823 | Msa1003980:intron | 45.0% |
| AATACAATGACGCCACCCAA+AGG | - | chr7_1:1059819-1059838 | None:intergenic | 45.0% | |
| AAGAAGCCTCATCCGATTAG+TGG | + | chr7_1:1060066-1060085 | Msa1003980:intron | 45.0% | |
| ATGTAGCCGCATCCACTAAT+CGG | - | chr7_1:1060081-1060100 | None:intergenic | 45.0% | |
| ! | CATATTCTCGTACCGGTAGT+CGG | - | chr7_1:1060215-1060234 | None:intergenic | 45.0% |
| ! | AAAAGGTGAAGTACCCGTAC+CGG | - | chr7_1:1060505-1060524 | None:intergenic | 45.0% |
| CGGCCTTCTTATTAGTTGTG+TGG | + | chr7_1:1060985-1061004 | Msa1003980:CDS | 45.0% | |
| TGGCTTCTTGTTCCAATCTC+TGG | + | chr7_1:1061005-1061024 | Msa1003980:CDS | 45.0% | |
| GGCTTCTTGTTCCAATCTCT+GGG | + | chr7_1:1061006-1061025 | Msa1003980:CDS | 45.0% | |
| TGGGCACTTATTATGGATGC+TGG | + | chr7_1:1061025-1061044 | Msa1003980:CDS | 45.0% | |
| AGGAATGGATCATGGAGCAA+TGG | + | chr7_1:1061193-1061212 | Msa1003980:intron | 45.0% | |
| GGAATGGATCATGGAGCAAT+GGG | + | chr7_1:1061194-1061213 | Msa1003980:intron | 45.0% | |
| TACTAATGGGAGCTCTCTTG+TGG | + | chr7_1:1061251-1061270 | Msa1003980:CDS | 45.0% | |
| ! | CGGGGGTCTTTAAGTTAGTT+AGG | + | chr7_1:1061357-1061376 | Msa1003980:intron | 45.0% |
| ! | TCTGAAATTTGAGCAGGGGT+GGG | + | chr7_1:1061489-1061508 | Msa1003980:intron | 45.0% |
| TGGTTCCCCTCTACACTAAA+TGG | + | chr7_1:1061543-1061562 | Msa1003980:intron | 45.0% | |
| GGTTCCCCTCTACACTAAAT+GGG | + | chr7_1:1061544-1061563 | Msa1003980:intron | 45.0% | |
| GATCCACATAAATGGGAGTG+AGG | + | chr7_1:1061627-1061646 | Msa1003980:intron | 45.0% | |
| TACAGGAAATTGGAACAGGC+GGG | - | chr7_1:1061787-1061806 | None:intergenic | 45.0% | |
| GTACAGGAAATTGGAACAGG+CGG | - | chr7_1:1061788-1061807 | None:intergenic | 45.0% | |
| CCTCTTTGCCATACTTGTAC+AGG | - | chr7_1:1061804-1061823 | None:intergenic | 45.0% | |
| CCTGTACAAGTATGGCAAAG+AGG | + | chr7_1:1061801-1061820 | Msa1003980:intron | 45.0% | |
| TTGTGTATACTGTGTGCCTG+TGG | - | chr7_1:1061979-1061998 | None:intergenic | 45.0% | |
| !! | GTTGGGGTGTTGTTATGTCA+CGG | + | chr7_1:1062096-1062115 | Msa1003980:CDS | 45.0% |
| GTTGTTATGTCACGGAATGC+TGG | + | chr7_1:1062104-1062123 | Msa1003980:CDS | 45.0% | |
| GAATGCTGGATTCAGTGATC+AGG | + | chr7_1:1062118-1062137 | Msa1003980:CDS | 45.0% | |
| ATTACTACATGGCCTGGCTT+TGG | + | chr7_1:1062268-1062287 | Msa1003980:intron | 45.0% | |
| GAGTCCTATCTTTCCAACAC+GGG | + | chr7_1:1062499-1062518 | Msa1003980:intron | 45.0% | |
| AAGTCCCGTGTTGGAAAGAT+AGG | - | chr7_1:1062506-1062525 | None:intergenic | 45.0% | |
| TATCTTTCCAACACGGGACT+TGG | + | chr7_1:1062505-1062524 | Msa1003980:intron | 45.0% | |
| GAAAAAACCAAGTCCCGTGT+TGG | - | chr7_1:1062515-1062534 | None:intergenic | 45.0% | |
| GTTGGATAGATCATAGGGGT+TGG | + | chr7_1:1062556-1062575 | Msa1003980:intron | 45.0% | |
| !! | GCAACTGTAGGAAGCACTAT+TGG | + | chr7_1:1062679-1062698 | Msa1003980:intron | 45.0% |
| AACTTTGTGCAGAGAAGGCA+AGG | - | chr7_1:1062876-1062895 | None:intergenic | 45.0% | |
| TGCCTTCTCTGCACAAAGTT+CGG | + | chr7_1:1062876-1062895 | Msa1003980:intron | 45.0% | |
| AACCGAACTTTGTGCAGAGA+AGG | - | chr7_1:1062881-1062900 | None:intergenic | 45.0% | |
| ACGTGGATGATGAGAAAGCA+AGG | - | chr7_1:1062937-1062956 | None:intergenic | 45.0% | |
| TGATTTCCTCTACCCTAGTG+AGG | + | chr7_1:1062979-1062998 | Msa1003980:CDS | 45.0% | |
| GATTTCCTCTACCCTAGTGA+GGG | + | chr7_1:1062980-1062999 | Msa1003980:CDS | 45.0% | |
| GTCTATGGATTCCCTCACTA+GGG | - | chr7_1:1062994-1063013 | None:intergenic | 45.0% | |
| TGAGGGAATCCATAGACGAT+GGG | + | chr7_1:1062997-1063016 | Msa1003980:CDS | 45.0% | |
| ! | GACGATGGGATAATGGTTAC+AGG | + | chr7_1:1063011-1063030 | Msa1003980:CDS | 45.0% |
| AGCACAAGCAAGCAAGGTAA+AGG | - | chr7_1:1063260-1063279 | None:intergenic | 45.0% | |
| TACCTTGCTTGCTTGTGCTA+TGG | + | chr7_1:1063261-1063280 | Msa1003980:intron | 45.0% | |
| ACCTTGCTTGCTTGTGCTAT+GGG | + | chr7_1:1063262-1063281 | Msa1003980:intron | 45.0% | |
| GTTCCCTTTACAAATGAGGG+AGG | + | chr7_1:1063391-1063410 | Msa1003980:intron | 45.0% | |
| !! | AATTGAAAAAAATAAATAAT+TGG | - | chr7_1:1056211-1056230 | None:intergenic | 5.0% |
| !!! | TAAATAAATTTTTTAAAACA+TGG | - | chr7_1:1056989-1057008 | None:intergenic | 5.0% |
| ! | TTTTCACAGCTTACCGGAGC+AGG | - | chr7_1:1056384-1056403 | None:intergenic | 50.0% |
| ! | CCAAACTTGTGCCGCTATCA+CGG | + | chr7_1:1056406-1056425 | Msa1003980:five_prime_UTR | 50.0% |
| ! | TTTTCTTGCCGCCGTGATAG+CGG | - | chr7_1:1056420-1056439 | None:intergenic | 50.0% |
| !! | GTGATGGGTGATGAAAGTGG+TGG | + | chr7_1:1056518-1056537 | Msa1003980:exon | 50.0% |
| !! | AGGTGTTGCTCAAGAGGATG+AGG | + | chr7_1:1056556-1056575 | Msa1003980:CDS | 50.0% |
| !! | GGTGTTGCTCAAGAGGATGA+GGG | + | chr7_1:1056557-1056576 | Msa1003980:CDS | 50.0% |
| CATAGGACACATACCCTCTC+AGG | - | chr7_1:1056599-1056618 | None:intergenic | 50.0% | |
| ACCCCAAAAAACCGGTTGTG+AGG | - | chr7_1:1057193-1057212 | None:intergenic | 50.0% | |
| GGGCGAAACTAGAACTAGGA+TGG | + | chr7_1:1057221-1057240 | Msa1003980:intron | 50.0% | |
| ! | GCACCTCATCCCAACACTTT+TGG | + | chr7_1:1057259-1057278 | Msa1003980:intron | 50.0% |
| GACCCAAAGGTTCAAGTAGG+AGG | + | chr7_1:1057518-1057537 | Msa1003980:intron | 50.0% | |
| CGCCTATGTTCAAAGTGGAG+AGG | + | chr7_1:1057543-1057562 | Msa1003980:CDS | 50.0% | |
| GTGGAGAGGAAACTTGGCAA+AGG | + | chr7_1:1057557-1057576 | Msa1003980:CDS | 50.0% | |
| GAGAGGAAACTTGGCAAAGG+TGG | + | chr7_1:1057560-1057579 | Msa1003980:CDS | 50.0% | |
| ! | TGGCAAAGGTGGATTTGGAC+AGG | + | chr7_1:1057571-1057590 | Msa1003980:CDS | 50.0% |
| AATGACCGTCTTAATGGCCC+CGG | + | chr7_1:1057623-1057642 | Msa1003980:CDS | 50.0% | |
| ACACTTGCCACTCGTAAGGA+GGG | - | chr7_1:1057793-1057812 | None:intergenic | 50.0% | |
| TACACTTGCCACTCGTAAGG+AGG | - | chr7_1:1057794-1057813 | None:intergenic | 50.0% | |
| CGAGTGGCAAGTGTACAAGT+AGG | + | chr7_1:1057799-1057818 | Msa1003980:intron | 50.0% | |
| ACATGCTTGGTCCAAGCTTG+TGG | + | chr7_1:1058122-1058141 | Msa1003980:CDS | 50.0% | |
| CATGCTTGGTCCAAGCTTGT+GGG | + | chr7_1:1058123-1058142 | Msa1003980:CDS | 50.0% | |
| GTCCAAGCTTGTGGGATGTT+TGG | + | chr7_1:1058131-1058150 | Msa1003980:CDS | 50.0% | |
| ! | TGTTTGGAATACCACAGGCC+AGG | + | chr7_1:1058147-1058166 | Msa1003980:CDS | 50.0% |
| GCGCTGTTTGATCCAAGTAG+CGG | + | chr7_1:1058409-1058428 | Msa1003980:intron | 50.0% | |
| GAGGACACAGCCAGAATAGA+AGG | - | chr7_1:1058675-1058694 | None:intergenic | 50.0% | |
| TAGGATGTCTGCCGAAATGG+TGG | + | chr7_1:1058827-1058846 | Msa1003980:intron | 50.0% | |
| AATGGTGGCATGCATTGCTG+TGG | + | chr7_1:1058842-1058861 | Msa1003980:CDS | 50.0% | |
| TGGAGAAGATGCACTCAAGG+GGG | + | chr7_1:1058880-1058899 | Msa1003980:CDS | 50.0% | |
| TTCAACATGCTGACCAGTGG+AGG | - | chr7_1:1059200-1059219 | None:intergenic | 50.0% | |
| AGCACCTGATAACCTTGCCA+TGG | - | chr7_1:1059433-1059452 | None:intergenic | 50.0% | |
| CAGAAGCAGCATAGCATCTC+AGG | - | chr7_1:1059593-1059612 | None:intergenic | 50.0% | |
| TTGGACCAAATCCTGCACTG+CGG | + | chr7_1:1059711-1059730 | Msa1003980:CDS | 50.0% | |
| GTATTAATTGGCCGCAGTGC+AGG | - | chr7_1:1059725-1059744 | None:intergenic | 50.0% | |
| ! | CCTCATCCGATTAGTGGATG+CGG | + | chr7_1:1060072-1060091 | Msa1003980:intron | 50.0% |
| ! | GATTAGTGGATGCGGCTACA+TGG | + | chr7_1:1060080-1060099 | Msa1003980:intron | 50.0% |
| ATAAGTACGGGTACGGTACC+CGG | + | chr7_1:1060176-1060195 | Msa1003980:intron | 50.0% | |
| GTACGGTACCCGGTACAATA+CGG | + | chr7_1:1060186-1060205 | Msa1003980:intron | 50.0% | |
| TACGGTACCCGGTACAATAC+GGG | + | chr7_1:1060187-1060206 | Msa1003980:intron | 50.0% | |
| AGTCGGTACCCGTATTGTAC+CGG | - | chr7_1:1060198-1060217 | None:intergenic | 50.0% | |
| !! | ACAATACGGGTACCGACTAC+CGG | + | chr7_1:1060200-1060219 | Msa1003980:intron | 50.0% |
| CGACTACCGGTACGAGAATA+TGG | + | chr7_1:1060213-1060232 | Msa1003980:intron | 50.0% | |
| ! | ACGAGTACCGTATGTGTACC+CGG | + | chr7_1:1060483-1060502 | Msa1003980:intron | 50.0% |
| TACCGTATGTGTACCCGGTA+CGG | + | chr7_1:1060488-1060507 | Msa1003980:intron | 50.0% | |
| ! | AAAGGTGAAGTACCCGTACC+GGG | - | chr7_1:1060504-1060523 | None:intergenic | 50.0% |
| GCACTCCCAGACATATCAGA+TGG | - | chr7_1:1060742-1060761 | None:intergenic | 50.0% | |
| !! | CTCTGAAATTTGAGCAGGGG+TGG | + | chr7_1:1061488-1061507 | Msa1003980:intron | 50.0% |
| CTGAAATTTGAGCAGGGGTG+GGG | + | chr7_1:1061490-1061509 | Msa1003980:intron | 50.0% | |
| TTGAATACCCGGCTGTCTGT+AGG | + | chr7_1:1061605-1061624 | Msa1003980:intron | 50.0% | |
| ATGTGGATCCTACAGACAGC+CGG | - | chr7_1:1061616-1061635 | None:intergenic | 50.0% | |
| CACCCTCACTCCCATTTATG+TGG | - | chr7_1:1061633-1061652 | None:intergenic | 50.0% | |
| GCGAGTCTTTCCCCTTCAAA+TGG | + | chr7_1:1062015-1062034 | Msa1003980:CDS | 50.0% | |
| ATTACTCGGAGACCAAAGCC+AGG | - | chr7_1:1062283-1062302 | None:intergenic | 50.0% | |
| GCTTGCAATCCTCTCTGGAT+TGG | + | chr7_1:1062318-1062337 | Msa1003980:intron | 50.0% | |
| CGTCTATGGATTCCCTCACT+AGG | - | chr7_1:1062995-1063014 | None:intergenic | 50.0% | |
| GTGAGGGAATCCATAGACGA+TGG | + | chr7_1:1062996-1063015 | Msa1003980:CDS | 50.0% | |
| TCACAGCAACTGCAGCTACA+TGG | + | chr7_1:1063035-1063054 | Msa1003980:CDS | 50.0% | |
| CACAGCAACTGCAGCTACAT+GGG | + | chr7_1:1063036-1063055 | Msa1003980:CDS | 50.0% | |
| AAGACCTGCTGACGAAACTC+AGG | + | chr7_1:1063093-1063112 | Msa1003980:CDS | 50.0% | |
| GTTTCCTGAGTTTCGTCAGC+AGG | - | chr7_1:1063100-1063119 | None:intergenic | 50.0% | |
| !! | AGCGGCTTGTTGTAGTGTAG+CGG | + | chr7_1:1063322-1063341 | Msa1003980:intron | 50.0% |
| GGGAACAATGTTGTCCATCG+CGG | - | chr7_1:1063377-1063396 | None:intergenic | 50.0% | |
| AGTACTTCGTCGTCCTGCTC+CGG | + | chr7_1:1056368-1056387 | Msa1003980:five_prime_UTR | 55.0% | |
| !! | CCGTGATAGCGGCACAAGTT+TGG | - | chr7_1:1056409-1056428 | None:intergenic | 55.0% |
| ! | AACTTGTGCCGCTATCACGG+CGG | + | chr7_1:1056409-1056428 | Msa1003980:five_prime_UTR | 55.0% |
| !! | GGGGTGATGGGTGATGAAAG+TGG | + | chr7_1:1056515-1056534 | Msa1003980:exon | 55.0% |
| GGCAATCCTCACCTCACAAC+CGG | + | chr7_1:1057179-1057198 | Msa1003980:intron | 55.0% | |
| AACTAGGATGGGCGACCTCT+TGG | + | chr7_1:1057233-1057252 | Msa1003980:intron | 55.0% | |
| ACTAGGATGGGCGACCTCTT+GGG | + | chr7_1:1057234-1057253 | Msa1003980:intron | 55.0% | |
| TCAGCATACCTCAGTGGCAC+CGG | - | chr7_1:1057645-1057664 | None:intergenic | 55.0% | |
| ! | GTGCCACTGAGGTATGCTGA+GGG | + | chr7_1:1057645-1057664 | Msa1003980:intron | 55.0% |
| CAACCCTCAGCATACCTCAG+TGG | - | chr7_1:1057651-1057670 | None:intergenic | 55.0% | |
| ACTATGGCCCTCCTTACGAG+TGG | + | chr7_1:1057783-1057802 | Msa1003980:CDS | 55.0% | |
| AGCACCCTTGGTGGAAGTCA+TGG | + | chr7_1:1057952-1057971 | Msa1003980:intron | 55.0% | |
| TTATACTCACGCCTGGCCTG+TGG | - | chr7_1:1058161-1058180 | None:intergenic | 55.0% | |
| AAGTGGAGAGACACCTCCAC+TGG | + | chr7_1:1059184-1059203 | Msa1003980:CDS | 55.0% | |
| ACCAGCGCCCTGATATGTTC+AGG | + | chr7_1:1059224-1059243 | Msa1003980:CDS | 55.0% | |
| ACCTGAACATATCAGGGCGC+TGG | - | chr7_1:1059228-1059247 | None:intergenic | 55.0% | |
| AAAGGCCGGTTACCATGGCA+AGG | + | chr7_1:1059418-1059437 | Msa1003980:CDS | 55.0% | |
| ATTGGCCGCAGTGCAGGATT+TGG | - | chr7_1:1059719-1059738 | None:intergenic | 55.0% | |
| TACCAGGTCGGGCAAAAGAG+AGG | + | chr7_1:1059871-1059890 | Msa1003980:intron | 55.0% | |
| ! | TACCTCTCTTTTGCCCGACC+TGG | - | chr7_1:1059876-1059895 | None:intergenic | 55.0% |
| TGGGGGTTCCTGCTACACAA+TGG | + | chr7_1:1059947-1059966 | Msa1003980:CDS | 55.0% | |
| CCGCATCCACTAATCGGATG+AGG | - | chr7_1:1060075-1060094 | None:intergenic | 55.0% | |
| GTCGGTACCCGTATTGTACC+GGG | - | chr7_1:1060197-1060216 | None:intergenic | 55.0% | |
| GGGTACACATACGGTACTCG+TGG | - | chr7_1:1060484-1060503 | None:intergenic | 55.0% | |
| ACCGTATGTGTACCCGGTAC+GGG | + | chr7_1:1060489-1060508 | Msa1003980:intron | 55.0% | |
| ACCCGTACCGGGTACACATA+CGG | - | chr7_1:1060493-1060512 | None:intergenic | 55.0% | |
| ! | AGGTGGTTCGGACACGTGTT+TGG | - | chr7_1:1060573-1060592 | None:intergenic | 55.0% |
| TTAGCGCAGCATGTAGAGCG+AGG | + | chr7_1:1060953-1060972 | Msa1003980:CDS | 55.0% | |
| TAGCGCAGCATGTAGAGCGA+GGG | + | chr7_1:1060954-1060973 | Msa1003980:CDS | 55.0% | |
| GTAGAGCGAGGGATTGCAGA+CGG | + | chr7_1:1060965-1060984 | Msa1003980:CDS | 55.0% | |
| TGTGGATCCTACAGACAGCC+GGG | - | chr7_1:1061615-1061634 | None:intergenic | 55.0% | |
| GTGACTTCAATGGCCACTGC+TGG | + | chr7_1:1062068-1062087 | Msa1003980:CDS | 55.0% | |
| GGTGTGCTTGCAATCCTCTC+TGG | + | chr7_1:1062313-1062332 | Msa1003980:intron | 55.0% | |
| GGATTCCCTCACTAGGGTAG+AGG | - | chr7_1:1062988-1063007 | None:intergenic | 55.0% | |
| GCCCATAGCACAAGCAAGCA+AGG | - | chr7_1:1063266-1063285 | None:intergenic | 55.0% | |
| TCGCGGATCGCGGAAAATAG+CGG | - | chr7_1:1063360-1063379 | None:intergenic | 55.0% | |
| ! | CTATTTTCCGCGATCCGCGA+TGG | + | chr7_1:1063360-1063379 | Msa1003980:intron | 55.0% |
| ATGTTGTCCATCGCGGATCG+CGG | - | chr7_1:1063370-1063389 | None:intergenic | 55.0% | |
| GGAGCAGGACGACGAAGTAC+TGG | - | chr7_1:1056369-1056388 | None:intergenic | 60.0% | |
| GGGATGAGGTGCAACCCAAG+AGG | - | chr7_1:1057251-1057270 | None:intergenic | 60.0% | |
| GTTGGTCGTCGAGTAACCGG+TGG | + | chr7_1:1057599-1057618 | Msa1003980:CDS | 60.0% | |
| ! | TGGCACCGGGGCCATTAAGA+CGG | - | chr7_1:1057631-1057650 | None:intergenic | 60.0% |
| AGCATACCTCAGTGGCACCG+GGG | - | chr7_1:1057643-1057662 | None:intergenic | 60.0% | |
| CAGCATACCTCAGTGGCACC+GGG | - | chr7_1:1057644-1057663 | None:intergenic | 60.0% | |
| !! | GGTGCCACTGAGGTATGCTG+AGG | + | chr7_1:1057644-1057663 | Msa1003980:intron | 60.0% |
| TGGCCACTGCTGGAAGTCGT+TGG | + | chr7_1:1062078-1062097 | Msa1003980:CDS | 60.0% | |
| GGCCACTGCTGGAAGTCGTT+GGG | + | chr7_1:1062079-1062098 | Msa1003980:CDS | 60.0% | |
| GCCACTGCTGGAAGTCGTTG+GGG | + | chr7_1:1062080-1062099 | Msa1003980:CDS | 60.0% | |
| ACCCCAACGACTTCCAGCAG+TGG | - | chr7_1:1062084-1062103 | None:intergenic | 60.0% | |
| TCGTCAGCAGGTCTTCGCCT+TGG | - | chr7_1:1063088-1063107 | None:intergenic | 60.0% | |
| !! | TAATGGCCCCGGTGCCACTG+AGG | + | chr7_1:1057634-1057653 | Msa1003980:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 1056119 | 1063497 | 1056119 | ID=Msa1003980;Name=Msa1003980 |
| chr7_1 | mRNA | 1056119 | 1063497 | 1056119 | ID=Msa1003980-mRNA-1;Parent=Msa1003980;Name=Msa1003980-mRNA-1;_AED=0.16;_eAED=0.17;_QI=402|0.93|0.93|1|0.93|0.93|16|0|585 |
| chr7_1 | exon | 1056119 | 1056604 | 1056119 | ID=Msa1003980-mRNA-1:exon:448;Parent=Msa1003980-mRNA-1 |
| chr7_1 | exon | 1057527 | 1057655 | 1057527 | ID=Msa1003980-mRNA-1:exon:449;Parent=Msa1003980-mRNA-1 |
| chr7_1 | exon | 1057743 | 1057816 | 1057743 | ID=Msa1003980-mRNA-1:exon:450;Parent=Msa1003980-mRNA-1 |
| chr7_1 | exon | 1057954 | 1058023 | 1057954 | ID=Msa1003980-mRNA-1:exon:451;Parent=Msa1003980-mRNA-1 |
| chr7_1 | exon | 1058115 | 1058170 | 1058115 | ID=Msa1003980-mRNA-1:exon:452;Parent=Msa1003980-mRNA-1 |
| chr7_1 | exon | 1058830 | 1058901 | 1058830 | ID=Msa1003980-mRNA-1:exon:453;Parent=Msa1003980-mRNA-1 |
| chr7_1 | exon | 1059003 | 1059097 | 1059003 | ID=Msa1003980-mRNA-1:exon:454;Parent=Msa1003980-mRNA-1 |
| chr7_1 | exon | 1059179 | 1059245 | 1059179 | ID=Msa1003980-mRNA-1:exon:455;Parent=Msa1003980-mRNA-1 |
| chr7_1 | exon | 1059318 | 1059447 | 1059318 | ID=Msa1003980-mRNA-1:exon:456;Parent=Msa1003980-mRNA-1 |
| chr7_1 | exon | 1059542 | 1059760 | 1059542 | ID=Msa1003980-mRNA-1:exon:457;Parent=Msa1003980-mRNA-1 |
| chr7_1 | exon | 1059877 | 1060007 | 1059877 | ID=Msa1003980-mRNA-1:exon:458;Parent=Msa1003980-mRNA-1 |
| chr7_1 | exon | 1060925 | 1061099 | 1060925 | ID=Msa1003980-mRNA-1:exon:459;Parent=Msa1003980-mRNA-1 |
| chr7_1 | exon | 1061195 | 1061285 | 1061195 | ID=Msa1003980-mRNA-1:exon:460;Parent=Msa1003980-mRNA-1 |
| chr7_1 | exon | 1061982 | 1062139 | 1061982 | ID=Msa1003980-mRNA-1:exon:461;Parent=Msa1003980-mRNA-1 |
| chr7_1 | exon | 1062968 | 1063156 | 1062968 | ID=Msa1003980-mRNA-1:exon:462;Parent=Msa1003980-mRNA-1 |
| chr7_1 | exon | 1063480 | 1063497 | 1063480 | ID=Msa1003980-mRNA-1:exon:463;Parent=Msa1003980-mRNA-1 |
| chr7_1 | five_prime_UTR | 1056119 | 1056520 | 1056119 | ID=Msa1003980-mRNA-1:five_prime_utr;Parent=Msa1003980-mRNA-1 |
| chr7_1 | CDS | 1056521 | 1056604 | 1056521 | ID=Msa1003980-mRNA-1:cds;Parent=Msa1003980-mRNA-1 |
| chr7_1 | CDS | 1057527 | 1057655 | 1057527 | ID=Msa1003980-mRNA-1:cds;Parent=Msa1003980-mRNA-1 |
| chr7_1 | CDS | 1057743 | 1057816 | 1057743 | ID=Msa1003980-mRNA-1:cds;Parent=Msa1003980-mRNA-1 |
| chr7_1 | CDS | 1057954 | 1058023 | 1057954 | ID=Msa1003980-mRNA-1:cds;Parent=Msa1003980-mRNA-1 |
| chr7_1 | CDS | 1058115 | 1058170 | 1058115 | ID=Msa1003980-mRNA-1:cds;Parent=Msa1003980-mRNA-1 |
| chr7_1 | CDS | 1058830 | 1058901 | 1058830 | ID=Msa1003980-mRNA-1:cds;Parent=Msa1003980-mRNA-1 |
| chr7_1 | CDS | 1059003 | 1059097 | 1059003 | ID=Msa1003980-mRNA-1:cds;Parent=Msa1003980-mRNA-1 |
| chr7_1 | CDS | 1059179 | 1059245 | 1059179 | ID=Msa1003980-mRNA-1:cds;Parent=Msa1003980-mRNA-1 |
| chr7_1 | CDS | 1059318 | 1059447 | 1059318 | ID=Msa1003980-mRNA-1:cds;Parent=Msa1003980-mRNA-1 |
| chr7_1 | CDS | 1059542 | 1059760 | 1059542 | ID=Msa1003980-mRNA-1:cds;Parent=Msa1003980-mRNA-1 |
| chr7_1 | CDS | 1059877 | 1060007 | 1059877 | ID=Msa1003980-mRNA-1:cds;Parent=Msa1003980-mRNA-1 |
| chr7_1 | CDS | 1060925 | 1061099 | 1060925 | ID=Msa1003980-mRNA-1:cds;Parent=Msa1003980-mRNA-1 |
| chr7_1 | CDS | 1061195 | 1061285 | 1061195 | ID=Msa1003980-mRNA-1:cds;Parent=Msa1003980-mRNA-1 |
| chr7_1 | CDS | 1061982 | 1062139 | 1061982 | ID=Msa1003980-mRNA-1:cds;Parent=Msa1003980-mRNA-1 |
| chr7_1 | CDS | 1062968 | 1063156 | 1062968 | ID=Msa1003980-mRNA-1:cds;Parent=Msa1003980-mRNA-1 |
| chr7_1 | CDS | 1063480 | 1063497 | 1063480 | ID=Msa1003980-mRNA-1:cds;Parent=Msa1003980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
