AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1007310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1007310 MtrunA17_Chr7g0217721 87.425 167 15 1 1 161 12 178 4.45e-106 306
Msa1007310 MtrunA17_Chr7g0217711 89.677 155 16 0 1 155 12 166 2.59e-103 293
Msa1007310 MtrunA17_Chr4g0060931 72.297 148 34 1 2 149 11 151 3.14e-73 223
Msa1007310 MtrunA17_Chr6g0453451 66.667 159 46 1 3 161 15 166 5.82e-73 221
Msa1007310 MtrunA17_Chr3g0091921 71.831 142 39 1 2 143 10 150 4.85e-70 213
Msa1007310 MtrunA17_Chr2g0316971 77.692 130 27 1 8 135 23 152 8.54e-69 213
Msa1007310 MtrunA17_Chr6g0461661 70.370 135 38 1 3 135 13 147 1.77e-67 209
Msa1007310 MtrunA17_Chr7g0253011 65.132 152 42 3 2 149 11 155 1.88e-65 204
Msa1007310 MtrunA17_Chr6g0484441 71.654 127 36 0 8 134 5 131 3.61e-65 202
Msa1007310 MtrunA17_Chr3g0144271 68.116 138 41 2 8 142 23 160 1.22e-61 196
Msa1007310 MtrunA17_Chr1g0147421 67.669 133 40 2 8 137 27 159 9.21e-61 191
Msa1007310 MtrunA17_Chr3g0139331 65.909 132 43 1 8 137 11 142 3.35e-60 189
Msa1007310 MtrunA17_Chr3g0113001 78.302 106 17 1 56 161 13 112 4.19e-56 177
Msa1007310 MtrunA17_Chr2g0312321 61.364 132 47 2 5 135 8 136 6.86e-54 172
Msa1007310 MtrunA17_Chr4g0056541 59.542 131 50 1 9 136 8 138 1.39e-52 171
Msa1007310 MtrunA17_Chr4g0017921 64.341 129 43 1 9 134 9 137 2.06e-52 170
Msa1007310 MtrunA17_Chr4g0018391 58.015 131 52 1 9 136 8 138 3.84e-52 169
Msa1007310 MtrunA17_Chr5g0398971 58.647 133 51 2 8 136 7 139 5.65e-52 169
Msa1007310 MtrunA17_Chr1g0183741 55.725 131 56 1 6 134 8 138 8.63e-52 166
Msa1007310 MtrunA17_Chr8g0372121 58.140 129 51 1 9 134 7 135 1.13e-50 164
Msa1007310 MtrunA17_Chr5g0405211 53.957 139 61 1 1 136 1 139 2.40e-50 164
Msa1007310 MtrunA17_Chr8g0346001 53.793 145 64 1 3 144 10 154 3.66e-50 166
Msa1007310 MtrunA17_Chr2g0309331 56.429 140 57 2 5 140 7 146 4.83e-50 163
Msa1007310 MtrunA17_Chr2g0309891 56.429 140 55 2 6 139 4 143 1.09e-49 162
Msa1007310 MtrunA17_Chr7g0261411 54.962 131 57 1 6 134 8 138 1.47e-49 160
Msa1007310 MtrunA17_Chr6g0481091 58.779 131 52 1 6 134 4 134 2.19e-49 159
Msa1007310 MtrunA17_Chr3g0128151 59.843 127 49 1 8 132 22 148 1.62e-48 164
Msa1007310 MtrunA17_Chr8g0359921 57.364 129 55 0 5 133 11 139 1.86e-48 159
Msa1007310 MtrunA17_Chr5g0433781 58.015 131 53 1 6 134 4 134 1.96e-48 165
Msa1007310 MtrunA17_Chr5g0428991 58.594 128 51 1 7 132 24 151 2.00e-48 165
Msa1007310 MtrunA17_Chr3g0124761 56.589 129 55 1 5 133 4 131 2.28e-48 157
Msa1007310 MtrunA17_Chr2g0318081 55.639 133 59 0 5 137 13 145 4.53e-48 159
Msa1007310 MtrunA17_Chr5g0417791 55.725 131 58 0 6 136 1 131 4.60e-48 156
Msa1007310 MtrunA17_Chr3g0109821 57.252 131 54 1 6 134 4 134 8.77e-48 164
Msa1007310 MtrunA17_Chr8g0384721 57.812 128 53 1 6 133 5 131 9.99e-48 156
Msa1007310 MtrunA17_Chr1g0200561 55.906 127 53 1 9 132 20 146 1.02e-47 157
Msa1007310 MtrunA17_Chr4g0042561 55.385 130 58 0 7 136 8 137 3.17e-47 154
Msa1007310 MtrunA17_Chr3g0130731 56.589 129 55 1 5 133 4 131 4.82e-47 154
Msa1007310 MtrunA17_Chr7g0252971 52.414 145 60 1 1 136 1 145 5.86e-47 155
Msa1007310 MtrunA17_Chr3g0128111 58.065 124 50 1 11 132 45 168 6.24e-47 152
Msa1007310 MtrunA17_Chr7g0263931 52.817 142 65 1 3 142 6 147 7.80e-47 155
Msa1007310 MtrunA17_Chr4g0047841 56.250 128 54 1 8 133 15 142 1.09e-46 155
Msa1007310 MtrunA17_Chr2g0318101 54.074 135 60 1 4 136 11 145 1.51e-46 155
Msa1007310 MtrunA17_Chr3g0113031 83.721 86 8 1 69 154 1 80 2.57e-46 152
Msa1007310 MtrunA17_Chr7g0214071 55.970 134 54 3 2 133 9 139 1.49e-45 149
Msa1007310 MtrunA17_Chr8g0361731 53.788 132 58 2 4 133 11 141 8.85e-45 151
Msa1007310 MtrunA17_Chr6g0453131 54.839 124 55 1 11 133 18 141 9.41e-44 148
Msa1007310 MtrunA17_Chr2g0326361 54.688 128 56 1 8 133 14 141 9.93e-44 147
Msa1007310 MtrunA17_Chr5g0417001 53.788 132 58 2 4 133 11 141 1.36e-43 148
Msa1007310 MtrunA17_Chr5g0400461 52.555 137 56 2 6 133 4 140 6.23e-43 145
Msa1007310 MtrunA17_Chr4g0054791 47.945 146 71 2 4 144 2 147 2.07e-42 143
Msa1007310 MtrunA17_Chr1g0201021 53.077 130 59 1 11 138 22 151 2.94e-41 145
Msa1007310 MtrunA17_Chr8g0364791 49.265 136 67 1 7 140 5 140 4.37e-41 142
Msa1007310 MtrunA17_Chr1g0197361 51.128 133 62 2 11 140 11 143 2.08e-40 142
Msa1007310 MtrunA17_Chr8g0384201 47.794 136 69 1 7 140 5 140 2.64e-40 141
Msa1007310 MtrunA17_Chr3g0130101 47.333 150 75 3 1 148 1 148 2.90e-40 138
Msa1007310 MtrunA17_Chr2g0311661 47.297 148 72 3 1 143 15 161 3.82e-40 136
Msa1007310 MtrunA17_Chr4g0076731 50.000 132 65 1 11 141 57 188 8.21e-40 139
Msa1007310 MtrunA17_Chr3g0092671 51.880 133 61 2 11 140 8 140 1.94e-39 139
Msa1007310 MtrunA17_Chr2g0311651 45.513 156 79 3 3 153 18 172 2.14e-39 135
Msa1007310 MtrunA17_Chr5g0442771 49.624 133 63 2 4 133 15 146 4.43e-39 134
Msa1007310 MtrunA17_Chr1g0197351 54.472 123 54 1 11 131 45 167 7.28e-39 137
Msa1007310 MtrunA17_Chr8g0345671 55.469 128 51 5 9 131 12 138 2.87e-38 134
Msa1007310 MtrunA17_Chr4g0038751 47.143 140 70 2 1 137 9 147 6.81e-37 128
Msa1007310 MtrunA17_Chr8g0345691 52.344 128 55 4 9 131 13 139 1.08e-36 130
Msa1007310 MtrunA17_Chr2g0321741 50.943 106 51 1 27 131 11 116 1.57e-34 123
Msa1007310 MtrunA17_Chr8g0385991 44.444 135 71 2 1 133 7 139 3.84e-34 119
Msa1007310 MtrunA17_Chr3g0131911 43.066 137 72 2 1 133 7 141 3.91e-33 117
Msa1007310 MtrunA17_Chr4g0026141 45.038 131 66 3 8 132 5 135 7.93e-32 114
Msa1007310 MtrunA17_Chr3g0113011 88.889 54 6 0 1 54 12 65 1.54e-31 108
Msa1007310 MtrunA17_Chr2g0321631 45.802 131 64 4 9 132 5 135 7.98e-31 111
Msa1007310 MtrunA17_Chr8g0345711 47.287 129 62 4 8 131 12 139 9.97e-31 109
Msa1007310 MtrunA17_Chr3g0113041 88.889 54 6 0 1 54 12 65 1.14e-29 103
Msa1007310 MtrunA17_Chr8g0345731 45.038 131 65 4 8 131 24 154 9.21e-29 104
Msa1007310 MtrunA17_Chr8g0345701 45.455 143 56 7 8 131 7 146 1.69e-28 103
Msa1007310 MtrunA17_Chr7g0266701 43.182 132 68 4 8 132 4 135 2.77e-27 102
Msa1007310 MtrunA17_Chr8g0345721 38.462 156 61 5 10 131 37 191 1.75e-26 99.4
Msa1007310 MtrunA17_Chr7g0243371 51.685 89 38 2 61 144 17 105 7.17e-26 95.1
Msa1007310 MtrunA17_Chr8g0345741 46.218 119 58 5 19 132 2 119 7.52e-26 96.3
Msa1007310 MtrunA17_Chr4g0050701 36.719 128 71 2 8 133 11 130 8.09e-23 89.4
Msa1007310 MtrunA17_Chr7g0251661 33.582 134 83 5 1 131 3 133 2.38e-17 74.3
Msa1007310 MtrunA17_Chr7g0251651 34.884 129 78 5 6 131 16 141 3.57e-17 74.7
Msa1007310 MtrunA17_Chr8g0384351 38.168 131 65 4 6 136 8 122 8.43e-17 73.6
Msa1007310 MtrunA17_Chr3g0130321 31.579 152 90 4 4 153 3 142 1.19e-14 68.6
Msa1007310 MtrunA17_Chr4g0040541 31.757 148 83 4 3 133 43 189 5.46e-14 67.8
Msa1007310 MtrunA17_Chr7g0251671 28.049 164 106 5 1 161 3 157 1.95e-13 64.3
Msa1007310 MtrunA17_Chr8g0367761 31.333 150 86 4 3 136 63 211 2.51e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1007310 AT5G61430.1 73.649 148 32 1 2 149 10 150 2.28e-74 226
Msa1007310 AT3G29035.1 75.373 134 33 0 2 135 18 151 3.86e-71 217
Msa1007310 AT5G07680.1 71.831 142 39 1 2 143 11 151 8.30e-71 216
Msa1007310 AT5G07680.2 74.265 136 34 1 8 143 3 137 1.21e-69 213
Msa1007310 AT5G39610.1 74.627 134 34 0 2 135 14 147 7.39e-69 210
Msa1007310 AT5G18270.1 70.922 141 39 2 4 143 17 156 5.71e-67 207
Msa1007310 AT5G18270.2 72.932 133 35 1 4 135 17 149 7.73e-67 207
Msa1007310 AT3G18400.1 71.094 128 37 0 8 135 5 132 1.69e-65 202
Msa1007310 AT5G53950.1 73.077 130 33 1 8 135 17 146 7.37e-65 203
Msa1007310 AT3G04060.1 68.889 135 41 1 2 135 14 148 3.43e-63 197
Msa1007310 AT2G24430.2 68.382 136 41 1 4 137 12 147 3.81e-63 196
Msa1007310 AT2G24430.1 68.382 136 41 1 4 137 12 147 3.81e-63 196
Msa1007310 AT3G15170.1 69.343 137 39 2 1 135 14 149 1.17e-62 195
Msa1007310 AT1G76420.1 65.693 137 45 1 2 136 16 152 1.16e-61 193
Msa1007310 AT3G12977.1 53.731 134 62 0 5 138 15 148 6.78e-54 172
Msa1007310 AT1G56010.2 52.703 148 64 2 5 151 16 158 2.32e-53 172
Msa1007310 AT2G46770.1 56.429 140 58 1 3 139 11 150 5.12e-52 169
Msa1007310 AT1G12260.2 58.779 131 51 1 9 136 8 138 5.18e-52 169
Msa1007310 AT4G10350.1 62.791 129 45 1 9 134 10 138 7.77e-52 168
Msa1007310 AT1G12260.1 59.690 129 49 1 9 134 8 136 1.04e-51 169
Msa1007310 AT1G62700.1 59.542 131 50 1 7 134 6 136 1.20e-51 169
Msa1007310 AT1G62700.2 59.542 131 50 1 7 134 6 136 1.20e-51 169
Msa1007310 AT1G33280.1 57.664 137 55 1 1 134 1 137 1.51e-50 164
Msa1007310 AT4G35580.2 59.843 127 49 1 8 132 9 135 1.57e-50 169
Msa1007310 AT4G36160.1 54.745 137 59 1 3 136 5 141 1.60e-50 166
Msa1007310 AT4G36160.3 54.745 137 59 1 3 136 5 141 1.60e-50 166
Msa1007310 AT4G35580.3 59.843 127 49 1 8 132 9 135 1.62e-50 169
Msa1007310 AT4G36160.2 54.745 137 59 1 3 136 9 145 1.68e-50 166
Msa1007310 AT4G35580.1 59.843 127 49 1 8 132 9 135 1.77e-50 169
Msa1007310 AT5G61430.2 80.851 94 11 1 56 149 1 87 3.10e-50 162
Msa1007310 AT2G18060.3 54.412 136 59 1 4 136 5 140 4.26e-50 164
Msa1007310 AT2G18060.1 54.412 136 59 1 4 136 5 140 4.26e-50 164
Msa1007310 AT5G66300.1 58.268 127 50 1 8 131 12 138 5.22e-50 162
Msa1007310 AT1G33060.1 60.630 127 48 1 8 132 24 150 5.29e-50 170
Msa1007310 AT1G33060.2 60.630 127 48 1 8 132 24 150 5.47e-50 170
Msa1007310 AT1G71930.2 52.174 138 63 1 5 139 6 143 7.15e-50 163
Msa1007310 AT1G71930.1 52.174 138 63 1 5 139 6 143 7.15e-50 163
Msa1007310 AT3G61910.1 53.237 139 62 1 3 138 6 144 1.25e-49 162
Msa1007310 AT4G27410.2 54.815 135 61 0 5 139 11 145 3.77e-49 160
Msa1007310 AT5G62380.2 56.923 130 53 1 8 134 7 136 3.80e-49 162
Msa1007310 AT5G62380.1 56.923 130 53 1 8 134 7 136 3.80e-49 162
Msa1007310 AT3G17730.1 57.252 131 54 1 6 134 4 134 1.24e-48 157
Msa1007310 AT5G08790.1 58.140 129 53 1 5 133 4 131 1.25e-48 158
Msa1007310 AT1G77450.1 57.031 128 54 1 6 133 8 134 1.59e-48 157
Msa1007310 AT1G32770.1 54.286 140 61 1 3 139 11 150 1.63e-48 160
Msa1007310 AT3G04070.2 55.944 143 57 2 2 139 4 145 3.86e-48 159
Msa1007310 AT1G65910.1 56.489 131 55 1 6 134 4 134 5.00e-48 164
Msa1007310 AT3G04070.1 55.944 143 57 2 2 139 4 145 6.87e-48 159
Msa1007310 AT3G03200.1 58.779 131 52 1 6 134 4 134 7.10e-48 161
Msa1007310 AT1G01720.1 55.725 131 57 1 3 133 2 131 8.35e-48 156
Msa1007310 AT1G61110.1 56.391 133 57 1 8 139 16 148 1.78e-47 157
Msa1007310 AT3G15500.1 55.039 129 58 0 5 133 11 139 2.24e-47 156
Msa1007310 AT1G52890.1 55.814 129 57 0 5 133 11 139 3.89e-47 155
Msa1007310 AT5G17260.1 57.252 131 54 1 6 134 4 134 4.13e-47 159
Msa1007310 AT5G39820.1 52.381 147 67 2 4 148 17 162 4.76e-47 156
Msa1007310 AT5G63790.1 57.364 129 54 1 5 133 47 174 6.35e-47 155
Msa1007310 AT1G54330.1 58.462 130 52 1 6 133 4 133 6.45e-47 154
Msa1007310 AT5G63790.2 57.364 129 54 1 5 133 57 184 7.20e-47 155
Msa1007310 AT3G49530.2 54.348 138 60 2 8 142 13 150 1.04e-46 157
Msa1007310 AT3G49530.1 54.348 138 60 2 8 142 13 150 3.20e-46 157
Msa1007310 AT1G69490.1 56.349 126 55 0 8 133 9 134 6.65e-46 151
Msa1007310 AT1G79580.3 55.970 134 55 2 5 134 14 147 6.68e-46 154
Msa1007310 AT1G79580.5 55.970 134 55 2 5 134 14 147 6.68e-46 154
Msa1007310 AT1G79580.4 55.970 134 55 2 5 134 14 147 6.68e-46 154
Msa1007310 AT1G79580.2 55.970 134 55 2 5 134 14 147 6.68e-46 154
Msa1007310 AT1G79580.1 55.970 134 55 2 5 134 14 147 6.68e-46 154
Msa1007310 AT2G27300.1 54.264 129 57 2 8 135 15 142 7.16e-46 153
Msa1007310 AT4G28530.1 50.000 146 55 2 7 134 9 154 2.21e-45 152
Msa1007310 AT5G04410.1 56.154 130 55 1 11 138 12 141 3.84e-45 155
Msa1007310 AT5G46590.2 52.206 136 62 2 8 140 6 141 4.87e-45 149
Msa1007310 AT5G46590.1 52.206 136 62 2 8 140 6 141 7.98e-45 149
Msa1007310 AT3G10500.1 54.615 130 57 1 11 138 12 141 9.68e-45 154
Msa1007310 AT1G26870.1 54.962 131 56 2 4 132 13 142 1.26e-44 152
Msa1007310 AT4G27410.3 48.684 152 61 1 5 139 11 162 1.40e-44 149
Msa1007310 AT2G33480.2 54.688 128 55 1 6 133 13 137 1.47e-44 147
Msa1007310 AT2G33480.1 54.688 128 55 1 6 133 13 137 1.51e-44 147
Msa1007310 AT5G24590.2 56.250 128 53 2 8 132 13 140 1.60e-44 152
Msa1007310 AT3G10490.1 57.600 125 51 1 11 133 30 154 3.91e-44 145
Msa1007310 AT5G13180.1 51.111 135 61 2 1 133 7 138 4.22e-44 146
Msa1007310 AT3G10480.1 59.200 125 49 1 11 133 30 154 4.71e-44 150
Msa1007310 AT3G10480.2 59.200 125 49 1 11 133 30 154 5.03e-44 150
Msa1007310 AT3G15510.1 55.738 122 52 1 14 133 23 144 1.48e-43 147
Msa1007310 AT3G10490.2 57.600 125 51 1 11 133 30 154 9.76e-43 147
Msa1007310 AT4G17980.1 53.077 130 57 2 8 133 6 135 1.03e-41 140
Msa1007310 AT2G02450.1 51.515 132 63 1 11 141 54 185 2.05e-41 142
Msa1007310 AT2G43000.1 47.692 130 68 0 11 140 21 150 2.41e-41 139
Msa1007310 AT2G02450.2 51.515 132 63 1 11 141 54 185 2.66e-41 143
Msa1007310 AT4G17980.2 53.077 130 57 2 8 133 6 135 2.94e-41 140
Msa1007310 AT5G22290.1 48.507 134 67 2 8 140 22 154 3.20e-41 141
Msa1007310 AT3G44290.2 50.000 132 64 2 8 138 15 145 1.62e-40 136
Msa1007310 AT5G09330.5 46.429 140 73 1 5 142 3 142 3.83e-40 141
Msa1007310 AT5G09330.2 46.429 140 73 1 5 142 3 142 3.83e-40 141
Msa1007310 AT5G09330.4 46.429 140 73 1 5 142 3 142 3.83e-40 141
Msa1007310 AT5G09330.3 46.429 140 73 1 5 142 3 142 3.83e-40 141
Msa1007310 AT5G09330.1 46.429 140 73 1 5 142 3 142 3.83e-40 141
Msa1007310 AT5G64060.1 45.000 140 75 1 5 142 3 142 1.68e-39 137
Msa1007310 AT3G44290.1 50.000 132 64 2 8 138 15 145 2.16e-39 136
Msa1007310 AT1G34190.1 50.769 130 62 1 11 138 19 148 2.66e-39 140
Msa1007310 AT1G34180.3 50.769 130 62 1 11 138 19 148 5.92e-39 137
Msa1007310 AT1G52880.1 53.543 127 55 1 14 136 23 149 6.01e-39 134
Msa1007310 AT1G32510.1 48.592 142 64 2 8 140 6 147 7.11e-39 133
Msa1007310 AT1G34180.1 50.769 130 62 1 11 138 19 148 1.67e-38 137
Msa1007310 AT3G10480.3 47.468 158 48 1 11 133 30 187 2.09e-38 137
Msa1007310 AT2G17040.1 47.015 134 67 2 6 136 5 137 1.64e-37 130
Msa1007310 AT1G34180.4 46.479 142 62 1 11 138 19 160 3.77e-37 132
Msa1007310 AT1G34180.2 46.479 142 62 1 11 138 19 160 9.56e-37 133
Msa1007310 AT3G12977.2 62.791 86 32 0 53 138 10 95 6.22e-36 124
Msa1007310 AT1G56010.1 59.375 96 34 1 56 151 1 91 3.34e-35 123
Msa1007310 AT3G12910.1 48.175 137 64 4 2 133 16 150 4.99e-35 124
Msa1007310 AT1G32870.2 52.308 130 58 2 11 138 13 140 1.71e-34 126
Msa1007310 AT1G32870.1 52.308 130 58 2 11 138 13 140 1.90e-34 126
Msa1007310 AT1G32870.3 52.308 130 58 2 11 138 49 176 2.02e-34 126
Msa1007310 AT4G10350.2 67.059 85 25 1 53 134 7 91 3.59e-34 121
Msa1007310 AT5G04395.1 44.828 145 64 2 8 136 28 172 3.39e-33 116
Msa1007310 AT2G33480.3 63.014 73 27 0 61 133 8 80 6.09e-29 106
Msa1007310 AT4G28530.2 42.424 132 58 2 7 120 9 140 5.19e-28 106
Msa1007310 AT4G01550.1 44.776 134 68 4 6 133 2 135 7.74e-28 107
Msa1007310 AT5G22380.1 41.860 129 68 4 10 131 7 135 1.46e-26 100
Msa1007310 AT1G02230.1 45.385 130 61 6 9 131 4 130 8.61e-26 100
Msa1007310 AT3G44350.1 40.876 137 74 5 10 139 7 143 9.53e-26 96.7
Msa1007310 AT4G01520.1 40.000 135 74 5 6 133 2 136 9.68e-26 100
Msa1007310 AT3G04420.2 40.157 127 72 2 9 131 4 130 3.64e-25 98.2
Msa1007310 AT4G01540.4 41.221 131 70 5 10 133 6 136 6.09e-25 99.0
Msa1007310 AT3G04420.1 40.157 127 72 2 9 131 4 130 6.66e-25 98.2
Msa1007310 AT4G01540.2 41.221 131 70 5 10 133 6 136 1.06e-24 99.0
Msa1007310 AT3G44350.2 40.876 137 74 5 10 139 7 143 1.08e-24 95.9
Msa1007310 AT4G01540.3 41.221 131 70 5 10 133 6 136 1.62e-24 98.2
Msa1007310 AT4G01540.1 41.221 131 70 5 10 133 6 136 1.73e-24 98.6
Msa1007310 AT3G10490.4 75.472 53 13 0 81 133 2 54 3.39e-22 91.3
Msa1007310 AT3G10490.3 75.472 53 13 0 81 133 2 54 3.39e-22 91.3
Msa1007310 AT1G01010.1 36.184 152 71 6 10 147 5 144 5.51e-22 91.3
Msa1007310 AT1G02220.1 37.795 127 72 3 9 131 4 127 4.63e-21 88.6
Msa1007310 AT5G64530.2 35.385 130 70 3 6 133 1 118 8.22e-21 84.0
Msa1007310 AT1G02250.1 38.462 130 70 4 9 131 4 130 1.28e-20 87.0
Msa1007310 AT2G18060.2 66.667 51 17 0 86 136 2 52 2.49e-20 85.1
Msa1007310 AT5G64530.1 35.385 130 70 3 6 133 1 118 3.83e-20 82.8
Msa1007310 AT5G14000.2 33.333 135 86 2 3 135 10 142 3.78e-18 76.6
Msa1007310 AT2G43000.2 47.222 72 38 0 69 140 1 72 9.77e-18 76.6
Msa1007310 AT3G56530.1 31.618 136 90 2 4 136 48 183 1.42e-17 78.2
Msa1007310 AT5G22290.2 57.407 54 23 0 87 140 2 55 1.73e-17 77.0
Msa1007310 AT5G14000.1 33.333 135 86 2 3 135 10 142 2.71e-17 75.9
Msa1007310 AT3G04430.1 36.364 132 70 4 14 132 6 136 4.97e-16 72.4
Msa1007310 AT3G55210.1 31.250 144 85 3 8 137 11 154 1.27e-15 72.4
Msa1007310 AT5G50820.1 29.801 151 90 5 1 145 10 150 2.37e-14 67.8
Msa1007310 AT4G28500.1 33.333 144 76 5 8 133 59 200 1.74e-12 63.9
Msa1007310 AT1G28470.1 31.169 154 88 5 8 145 77 228 4.09e-12 63.2

Find 42 sgRNAs with CRISPR-Local

Find 193 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAAGGGAAATTCATTAAT+TGG 0.105364 7_1:+6738191 Msa1007310:CDS
TTATTTAGAGATGGCTAAAA+TGG 0.245081 7_1:+6738052 Msa1007310:intron
GGTCAAATTTCCTGTTGGTT+GGG 0.351990 7_1:+6737121 Msa1007310:CDS
ACAAGGGAAATTCATTAATT+GGG 0.364746 7_1:+6738192 Msa1007310:CDS
GAGCTACTAATGCTGGCTAT+TGG 0.387868 7_1:+6738141 Msa1007310:CDS
GCCAGCATTAGTAGCTCTAT+TGG 0.388516 7_1:-6738135 None:intergenic
GCTGGCTATTGGAAAGCAAC+GGG 0.412908 7_1:+6738152 Msa1007310:CDS
TATTGGTCCTTTGACCAGTT+GGG 0.417126 7_1:-6738118 None:intergenic
AAATCAATACCTTGTTAAGA+AGG 0.419367 7_1:+6737172 Msa1007310:CDS
GTCAAATTTCCTGTTGGTTG+GGG 0.422199 7_1:+6737122 Msa1007310:CDS
CTATTGGTCCTTTGACCAGT+TGG 0.441493 7_1:-6738119 None:intergenic
AGGTCAAATTTCCTGTTGGT+TGG 0.481996 7_1:+6737120 Msa1007310:CDS
GGAAAGAATCCCCAACCAAC+AGG 0.482058 7_1:-6737131 None:intergenic
TATTTAGAGATGGCTAAAAT+GGG 0.486414 7_1:+6738053 Msa1007310:intron
ACCAATAGAGCTACTAATGC+TGG 0.495849 7_1:+6738134 Msa1007310:CDS
TTGATTTATAAGTTCTTCAT+CGG 0.499522 7_1:-6737156 None:intergenic
TTACCATTCCATGCGTGGAT+AGG 0.529914 7_1:-6738340 None:intergenic
ACACTTATTCATATCAACTT+CGG 0.532035 7_1:-6737228 None:intergenic
GAAAAGGTCAAATTTCCTGT+TGG 0.532681 7_1:+6737116 Msa1007310:CDS
AGGGACAGAAAATACCCAAC+TGG 0.538414 7_1:+6738104 Msa1007310:CDS
TTTATAAGTTCTTCATCGGT+CGG 0.539042 7_1:-6737152 None:intergenic
TGCTGGCTATTGGAAAGCAA+CGG 0.539232 7_1:+6738151 Msa1007310:CDS
TGCGTGGATAGGTTGTGCTC+AGG 0.549718 7_1:-6738329 None:intergenic
CAACCTATCCACGCATGGAA+TGG 0.557142 7_1:+6738337 Msa1007310:CDS
AGAGTGAGTTTCCCTCCAAT+CGG 0.564192 7_1:-6738289 None:intergenic
CAATATTACCATTCCATGCG+TGG 0.574955 7_1:-6738345 None:intergenic
GGTCATGCATGAATACCGAT+TGG 0.588791 7_1:+6738274 Msa1007310:CDS
AACTCACCTGGCAAATCCCA+TGG 0.590332 7_1:-6737254 None:intergenic
CATGCATGAATACCGATTGG+AGG 0.592763 7_1:+6738277 Msa1007310:CDS
CTAAAATGGGAGAAACAGAA+TGG 0.594315 7_1:+6738066 Msa1007310:CDS
GAAAATACCCAACTGGTCAA+AGG 0.598845 7_1:+6738111 Msa1007310:CDS
GTATTCATGCATGACCCAGT+TGG 0.607268 7_1:-6738267 None:intergenic
ATGCATGAATACCGATTGGA+GGG 0.612532 7_1:+6738278 Msa1007310:CDS
TGTCATCAACCTTCTTAACA+AGG 0.615528 7_1:-6737181 None:intergenic
TGTGAACCATGGGATTTGCC+AGG 0.615720 7_1:+6737248 Msa1007310:CDS
GAAAGACAAAGAGATTTACA+AGG 0.634963 7_1:+6738175 Msa1007310:CDS
GAGCACAACCTATCCACGCA+TGG 0.636675 7_1:+6738332 Msa1007310:CDS
TATGAATAAGTGTGAACCAT+GGG 0.641317 7_1:+6737238 Msa1007310:CDS
AAAGACAAAGAGATTTACAA+GGG 0.672892 7_1:+6738176 Msa1007310:CDS
ATATGAATAAGTGTGAACCA+TGG 0.681966 7_1:+6737237 Msa1007310:CDS
CTGGCTATTGGAAAGCAACG+GGG 0.700603 7_1:+6738153 Msa1007310:CDS
TACAGAGGAAGAGCTCCGAG+CGG 0.756904 7_1:+6738236 Msa1007310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAAAAGTTACTTTTATTA+TGG - chr7_1:6738676-6738695 None:intergenic 10.0%
!! AAAAAGAAAGAAAAACAATT+TGG + chr7_1:6737669-6737688 Msa1007310:intron 15.0%
!!! TTTTTTTCTTTATTTAGAGA+TGG + chr7_1:6738043-6738062 Msa1007310:intron 15.0%
!!! ATTTTTTTTTTTCAAAAGCA+CGG - chr7_1:6738483-6738502 None:intergenic 15.0%
!!! AGTTTACTTTATTTAGAAAA+AGG - chr7_1:6738637-6738656 None:intergenic 15.0%
!!! TTACTTTAAAAGTTTTCTAA+AGG + chr7_1:6739726-6739745 Msa1007310:intron 15.0%
!! TTGATTTATAAGTTCTTCAT+CGG - chr7_1:6737159-6737178 None:intergenic 20.0%
!!! GTGAGTTTAATGTTTTTTAT+AGG + chr7_1:6737270-6737289 Msa1007310:intron 20.0%
!! ATGATATTATATTAGTAGTC+TGG + chr7_1:6737313-6737332 Msa1007310:intron 20.0%
!!! AAGAAAGCATAATTAAGTTA+TGG - chr7_1:6738022-6738041 None:intergenic 20.0%
!! AACATATCTTAGTAAATGTT+TGG - chr7_1:6738560-6738579 None:intergenic 20.0%
!! TTACAAACAAAATTTCATGT+TGG + chr7_1:6739429-6739448 Msa1007310:intron 20.0%
!!! AATTTATCTATTTCGTTTTG+TGG + chr7_1:6739469-6739488 Msa1007310:intron 20.0%
!!! TTTTTTCGAAGAAAAGTATA+TGG + chr7_1:6739690-6739709 Msa1007310:intron 20.0%
!! TCATTTATACTATTCATTGT+TGG + chr7_1:6740306-6740325 Msa1007310:intron 20.0%
!!! TGATTTCTGTTAAATTTGTT+AGG + chr7_1:6740354-6740373 Msa1007310:intron 20.0%
! AAATCAATACCTTGTTAAGA+AGG + chr7_1:6737172-6737191 Msa1007310:CDS 25.0%
! ACACTTATTCATATCAACTT+CGG - chr7_1:6737231-6737250 None:intergenic 25.0%
! TAAAAAACATTAAACTCACC+TGG - chr7_1:6737269-6737288 None:intergenic 25.0%
!! AATTCATCCTTTCTTTTTGT+AGG - chr7_1:6737354-6737373 None:intergenic 25.0%
! CTTGATATTTCATCTTAATG+CGG - chr7_1:6737535-6737554 None:intergenic 25.0%
!!! CACATAATTTTAGTGTTCTT+TGG - chr7_1:6737629-6737648 None:intergenic 25.0%
! CAAAGAACACTAAAATTATG+TGG + chr7_1:6737627-6737646 Msa1007310:intron 25.0%
! TTACTCCTTAGATATATTGT+CGG + chr7_1:6737808-6737827 Msa1007310:intron 25.0%
! TTATTTAGAGATGGCTAAAA+TGG + chr7_1:6738052-6738071 Msa1007310:intron 25.0%
! TATTTAGAGATGGCTAAAAT+GGG + chr7_1:6738053-6738072 Msa1007310:intron 25.0%
! AAAGACAAAGAGATTTACAA+GGG + chr7_1:6738176-6738195 Msa1007310:CDS 25.0%
! TACAAGGGAAATTCATTAAT+TGG + chr7_1:6738191-6738210 Msa1007310:CDS 25.0%
! ACAAGGGAAATTCATTAATT+GGG + chr7_1:6738192-6738211 Msa1007310:CDS 25.0%
! TAAGTTTGACGATGATAAAA+TGG - chr7_1:6738529-6738548 None:intergenic 25.0%
! AAAATGGATGGTTCAAAATT+TGG + chr7_1:6738934-6738953 Msa1007310:intron 25.0%
!! AGAAATCAGAAATAGTGTTT+TGG - chr7_1:6739050-6739069 None:intergenic 25.0%
!!! TTTTGTTTCTCTGTTTGATT+TGG - chr7_1:6739099-6739118 None:intergenic 25.0%
! AAAATTCCAAAAGCTATCAT+TGG - chr7_1:6739406-6739425 None:intergenic 25.0%
!! TGTGGTATACATATTTTATC+AGG + chr7_1:6739487-6739506 Msa1007310:intron 25.0%
! AAGTAACTATCAATCTTTGT+CGG - chr7_1:6739666-6739685 None:intergenic 25.0%
!! GTTCACGAAAAAAAAAGTAT+AGG + chr7_1:6739822-6739841 Msa1007310:intron 25.0%
! GTTACAAACATGAAACTTAA+AGG - chr7_1:6740072-6740091 None:intergenic 25.0%
!!! ATAGGTCCTTTAAGTTTTTT+AGG + chr7_1:6739888-6739907 Msa1007310:intron 25.0%
! CTGTTACCTAAAAAACTTAA+AGG - chr7_1:6740041-6740060 None:intergenic 25.0%
!!! AAGTTTTTTAGGTAACAGAT+AGG + chr7_1:6739899-6739918 Msa1007310:intron 25.0%
!!! AAGTTTCTAAAGTTTCAGAT+AGG - chr7_1:6740010-6740029 None:intergenic 25.0%
!! CTGAAACTTTAGAAACTTAA+AGG + chr7_1:6740012-6740031 Msa1007310:intron 25.0%
!!! AAGTTTTTTAGGTAACAGAT+AGG - chr7_1:6739899-6739918 None:intergenic 25.0%
! CTGTTACCTAAAAAACTTAA+AGG + chr7_1:6740041-6740060 Msa1007310:intron 25.0%
!!! ATAGGTCCTTTAAGTTTTTT+AGG - chr7_1:6739888-6739907 None:intergenic 25.0%
! GTTACAAACATGAAACTTAA+AGG + chr7_1:6740072-6740091 Msa1007310:intron 25.0%
! TCATGAAATTGAACAAAACA+AGG + chr7_1:6740164-6740183 Msa1007310:intron 25.0%
! TTTGAAAAAAAGTTGTCTCA+TGG - chr7_1:6740232-6740251 None:intergenic 25.0%
! ATATGTGTGTGTGTTAAAAA+TGG - chr7_1:6740282-6740301 None:intergenic 25.0%
TTTATAAGTTCTTCATCGGT+CGG - chr7_1:6737155-6737174 None:intergenic 30.0%
ATATGAATAAGTGTGAACCA+TGG + chr7_1:6737237-6737256 Msa1007310:CDS 30.0%
TATGAATAAGTGTGAACCAT+GGG + chr7_1:6737238-6737257 Msa1007310:CDS 30.0%
! CATCAATTTTATAGATCTGC+AGG - chr7_1:6737445-6737464 None:intergenic 30.0%
CTGCAGATCTATAAAATTGA+TGG + chr7_1:6737443-6737462 Msa1007310:intron 30.0%
!! TTTGATTCAGGTTGAAAGAT+TGG - chr7_1:6737506-6737525 None:intergenic 30.0%
GAAAGAAAAACAATTTGGAG+AGG + chr7_1:6737674-6737693 Msa1007310:intron 30.0%
TTTCTAGATCTACCAATGAA+GGG - chr7_1:6737730-6737749 None:intergenic 30.0%
! TTTTCTAGATCTACCAATGA+AGG - chr7_1:6737731-6737750 None:intergenic 30.0%
AGATACCGACAATATATCTA+AGG - chr7_1:6737816-6737835 None:intergenic 30.0%
ATATTGTCGGTATCTTACTT+TGG + chr7_1:6737821-6737840 Msa1007310:intron 30.0%
!!! AATGGTATTTTTTCTGTGTG+AGG + chr7_1:6738084-6738103 Msa1007310:CDS 30.0%
!!! ATGGTATTTTTTCTGTGTGA+GGG + chr7_1:6738085-6738104 Msa1007310:CDS 30.0%
GAAAGACAAAGAGATTTACA+AGG + chr7_1:6738175-6738194 Msa1007310:CDS 30.0%
AATTGGGATGAAAAAAACAC+TGG + chr7_1:6738208-6738227 Msa1007310:CDS 30.0%
ACGTAATTCTATCAAACACA+TGG - chr7_1:6738453-6738472 None:intergenic 30.0%
!!! AACCTTTTTTGTAGAGTGAA+TGG + chr7_1:6738872-6738891 Msa1007310:intron 30.0%
!!! ACCTTTTTTGTAGAGTGAAT+GGG + chr7_1:6738873-6738892 Msa1007310:intron 30.0%
! AATTCTGGAAAGAAAATGGA+TGG + chr7_1:6738922-6738941 Msa1007310:intron 30.0%
!! TTTCTCTGTTTGATTTGGAT+TGG - chr7_1:6739094-6739113 None:intergenic 30.0%
TTCTTCCTCTTCAAAACAAA+TGG + chr7_1:6739170-6739189 Msa1007310:intron 30.0%
!!! AACATCCATTTGTTTTGAAG+AGG - chr7_1:6739178-6739197 None:intergenic 30.0%
ATATCTCATCTGTGGTATAT+GGG + chr7_1:6739316-6739335 Msa1007310:intron 30.0%
GTGAACATATTTGTATTGTC+TGG - chr7_1:6739808-6739827 None:intergenic 30.0%
GTTTCATGTTTGTAACAGAT+AGG + chr7_1:6739870-6739889 Msa1007310:intron 30.0%
! ATAGGTCCTTTAAGTTTCTA+AGG + chr7_1:6739917-6739936 Msa1007310:intron 30.0%
CTGAAACCTTAGAAACTTAA+AGG - chr7_1:6739926-6739945 None:intergenic 30.0%
!! AAGTTTCTAAGGTTTCAGAT+AGG + chr7_1:6739928-6739947 Msa1007310:intron 30.0%
GAAACAAACTCGAAACTTAA+AGG - chr7_1:6739955-6739974 None:intergenic 30.0%
GTTTCATGTTTGTAACAGAT+AGG - chr7_1:6739870-6739889 None:intergenic 30.0%
! AAGAGTTGTCCTATACTTTT+TGG - chr7_1:6740116-6740135 None:intergenic 30.0%
ATTGAACAAAACAAGGTGTA+TGG + chr7_1:6740171-6740190 Msa1007310:intron 30.0%
TTGAACAAAACAAGGTGTAT+GGG + chr7_1:6740172-6740191 Msa1007310:intron 30.0%
GAAAAGGTCAAATTTCCTGT+TGG + chr7_1:6737116-6737135 Msa1007310:CDS 35.0%
TGTCATCAACCTTCTTAACA+AGG - chr7_1:6737184-6737203 None:intergenic 35.0%
AACTACGCCTACAAAAAGAA+AGG + chr7_1:6737344-6737363 Msa1007310:intron 35.0%
CCAGATCTAATCAATGACTT+TGG - chr7_1:6737471-6737490 None:intergenic 35.0%
! CCAAAGTCATTGATTAGATC+TGG + chr7_1:6737468-6737487 Msa1007310:intron 35.0%
ATGCGGTGTATATTTGATTC+AGG - chr7_1:6737518-6737537 None:intergenic 35.0%
! ACAATTTGGAGAGGTGATTT+TGG + chr7_1:6737683-6737702 Msa1007310:intron 35.0%
! CAATTTGGAGAGGTGATTTT+GGG + chr7_1:6737684-6737703 Msa1007310:intron 35.0%
AAAAGAAAAGTTGTGACGAC+TGG + chr7_1:6737755-6737774 Msa1007310:intron 35.0%
AAAGAAAAGTTGTGACGACT+GGG + chr7_1:6737756-6737775 Msa1007310:intron 35.0%
CTAAAATGGGAGAAACAGAA+TGG + chr7_1:6738066-6738085 Msa1007310:CDS 35.0%
!!! AAAACACTGGTTTTCTACAG+AGG + chr7_1:6738221-6738240 Msa1007310:CDS 35.0%
ACCCATTCACTCTACAAAAA+AGG - chr7_1:6738877-6738896 None:intergenic 35.0%
! GCGTAATTCTGGAAAGAAAA+TGG + chr7_1:6738918-6738937 Msa1007310:intron 35.0%
TGGATGGTTCAAAATTTGGA+AGG + chr7_1:6738938-6738957 Msa1007310:intron 35.0%
!! ATCTCTATTGACTCCATTGT+TGG + chr7_1:6738999-6739018 Msa1007310:intron 35.0%
TATGGAGAAGAATCCAACAA+TGG - chr7_1:6739015-6739034 None:intergenic 35.0%
TTGGATTCTTCTCCATACAA+TGG + chr7_1:6739018-6739037 Msa1007310:intron 35.0%
!! TTTTGGTCTTCACCATTGTA+TGG - chr7_1:6739033-6739052 None:intergenic 35.0%
ACACAAGATGACAACATTGT+TGG + chr7_1:6739120-6739139 Msa1007310:intron 35.0%
! CAATTGTTGCTTCAGCTAAA+GGG - chr7_1:6739203-6739222 None:intergenic 35.0%
! TTCTCCCAAGAGTTTTCTTT+TGG + chr7_1:6739270-6739289 Msa1007310:intron 35.0%
! TCTCCCAAGAGTTTTCTTTT+GGG + chr7_1:6739271-6739290 Msa1007310:intron 35.0%
TCTCCCAAAAGAAAACTCTT+GGG - chr7_1:6739277-6739296 None:intergenic 35.0%
GATATCTCATCTGTGGTATA+TGG + chr7_1:6739315-6739334 Msa1007310:intron 35.0%
ATGGGAATGACATGTTTCAA+AGG + chr7_1:6739334-6739353 Msa1007310:intron 35.0%
!!! GATTTTTTACCAGCTTCTAC+TGG + chr7_1:6739372-6739391 Msa1007310:intron 35.0%
AGTTTCAGATAGGTCCTTAA+CGG - chr7_1:6740000-6740019 None:intergenic 35.0%
! GGTATTTGGCCAAAAAGTAT+AGG + chr7_1:6740104-6740123 Msa1007310:intron 35.0%
AGGTCAAATTTCCTGTTGGT+TGG + chr7_1:6737120-6737139 Msa1007310:CDS 40.0%
! GGTCAAATTTCCTGTTGGTT+GGG + chr7_1:6737121-6737140 Msa1007310:CDS 40.0%
! GTCAAATTTCCTGTTGGTTG+GGG + chr7_1:6737122-6737141 Msa1007310:CDS 40.0%
! TTTTATAGATCTGCAGGCGT+CGG - chr7_1:6737439-6737458 None:intergenic 40.0%
! GTCATTGATTAGATCTGGAC+TGG + chr7_1:6737473-6737492 Msa1007310:intron 40.0%
CAAACAACGTCGTACTTTGA+TGG + chr7_1:6737585-6737604 Msa1007310:intron 40.0%
AAACCTAAACCACCCTTCAT+TGG + chr7_1:6737715-6737734 Msa1007310:intron 40.0%
AAGAAAAGTTGTGACGACTG+GGG + chr7_1:6737757-6737776 Msa1007310:intron 40.0%
TTGTCGGTATCTTACTTTGG+TGG + chr7_1:6737824-6737843 Msa1007310:intron 40.0%
GACACATTATGATGTGTCAG+TGG - chr7_1:6737878-6737897 None:intergenic 40.0%
CTGACACATCATAATGTGTC+AGG + chr7_1:6737878-6737897 Msa1007310:intron 40.0%
TGCACCAACATGACACTAAT+AGG + chr7_1:6737905-6737924 Msa1007310:intron 40.0%
ACCAACATGACACTAATAGG+CGG + chr7_1:6737908-6737927 Msa1007310:intron 40.0%
GAAAATACCCAACTGGTCAA+AGG + chr7_1:6738111-6738130 Msa1007310:CDS 40.0%
TATTGGTCCTTTGACCAGTT+GGG - chr7_1:6738121-6738140 None:intergenic 40.0%
ACCAATAGAGCTACTAATGC+TGG + chr7_1:6738134-6738153 Msa1007310:CDS 40.0%
! ATGCATGAATACCGATTGGA+GGG + chr7_1:6738278-6738297 Msa1007310:CDS 40.0%
CAATATTACCATTCCATGCG+TGG - chr7_1:6738348-6738367 None:intergenic 40.0%
ATTACGCTTCTCAAAGACTC+TGG - chr7_1:6738905-6738924 None:intergenic 40.0%
! GTCTTTGAGAAGCGTAATTC+TGG + chr7_1:6738907-6738926 Msa1007310:intron 40.0%
AATTGAACGTCCATCTCTAG+AGG - chr7_1:6738971-6738990 None:intergenic 40.0%
! GCAATTGTTGCTTCAGCTAA+AGG - chr7_1:6739204-6739223 None:intergenic 40.0%
TGATTCCAACCAAACCTCAA+TGG + chr7_1:6739224-6739243 Msa1007310:intron 40.0%
AATTCCCAACCATTGAGGTT+TGG - chr7_1:6739236-6739255 None:intergenic 40.0%
TGATGAATTCCCAACCATTG+AGG - chr7_1:6739241-6739260 None:intergenic 40.0%
CTCTCCCAAAAGAAAACTCT+TGG - chr7_1:6739278-6739297 None:intergenic 40.0%
TGATGCTGATATCTCATCTG+TGG + chr7_1:6739308-6739327 Msa1007310:intron 40.0%
GGAATGACATGTTTCAAAGG+TGG + chr7_1:6739337-6739356 Msa1007310:intron 40.0%
ACATGTTTCAAAGGTGGTCT+GGG + chr7_1:6739343-6739362 Msa1007310:intron 40.0%
CATGAAACTTAAAGGACCCA+GGG - chr7_1:6740080-6740099 None:intergenic 40.0%
ACATGAAACTTAAAGGACCC+AGG - chr7_1:6740079-6740098 None:intergenic 40.0%
!! CCTTAACGGAGTTGATATGA+AGG - chr7_1:6739986-6740005 None:intergenic 40.0%
CCTTCATATCAACTCCGTTA+AGG + chr7_1:6739983-6740002 Msa1007310:intron 40.0%
ACATGAAACTTAAAGGACCC+AGG + chr7_1:6740079-6740098 Msa1007310:intron 40.0%
CATGAAACTTAAAGGACCCA+GGG + chr7_1:6740080-6740099 Msa1007310:intron 40.0%
CTACCAATGAAGGGTGGTTT+AGG - chr7_1:6737721-6737740 None:intergenic 45.0%
CTAGATCTACCAATGAAGGG+TGG - chr7_1:6737727-6737746 None:intergenic 45.0%
CCAACATGACACTAATAGGC+GGG + chr7_1:6737909-6737928 Msa1007310:intron 45.0%
CAACATGACACTAATAGGCG+GGG + chr7_1:6737910-6737929 Msa1007310:intron 45.0%
AGGGACAGAAAATACCCAAC+TGG + chr7_1:6738104-6738123 Msa1007310:CDS 45.0%
CTATTGGTCCTTTGACCAGT+TGG - chr7_1:6738122-6738141 None:intergenic 45.0%
! GCCAGCATTAGTAGCTCTAT+TGG - chr7_1:6738138-6738157 None:intergenic 45.0%
! GAGCTACTAATGCTGGCTAT+TGG + chr7_1:6738141-6738160 Msa1007310:CDS 45.0%
! TGCTGGCTATTGGAAAGCAA+CGG + chr7_1:6738151-6738170 Msa1007310:CDS 45.0%
!!! CAGTTGGTTTTTTCACCGCT+CGG - chr7_1:6738254-6738273 None:intergenic 45.0%
GAGCGGTGAAAAAACCAACT+GGG + chr7_1:6738253-6738272 Msa1007310:CDS 45.0%
GTATTCATGCATGACCCAGT+TGG - chr7_1:6738270-6738289 None:intergenic 45.0%
GGTCATGCATGAATACCGAT+TGG + chr7_1:6738274-6738293 Msa1007310:CDS 45.0%
! CATGCATGAATACCGATTGG+AGG + chr7_1:6738277-6738296 Msa1007310:CDS 45.0%
AGAGTGAGTTTCCCTCCAAT+CGG - chr7_1:6738292-6738311 None:intergenic 45.0%
TTACCATTCCATGCGTGGAT+AGG - chr7_1:6738343-6738362 None:intergenic 45.0%
! AGGTCTAACTCCTCTAGAGA+TGG + chr7_1:6738958-6738977 Msa1007310:intron 45.0%
TCCAACCAAACCTCAATGGT+TGG + chr7_1:6739228-6739247 Msa1007310:intron 45.0%
CCAACCAAACCTCAATGGTT+GGG + chr7_1:6739229-6739248 Msa1007310:intron 45.0%
GACATGTTTCAAAGGTGGTC+TGG + chr7_1:6739342-6739361 Msa1007310:intron 45.0%
! TTGCGGCCAATGATAGCTTT+TGG + chr7_1:6739397-6739416 Msa1007310:intron 45.0%
TATAGGCCAAATACCTCCCT+GGG + chr7_1:6739839-6739858 Msa1007310:intron 45.0%
! TTTTGGCCAAATACCTCCCT+GGG - chr7_1:6740099-6740118 None:intergenic 45.0%
!! TTTTTGGCCAAATACCTCCC+TGG - chr7_1:6740100-6740119 None:intergenic 45.0%
GGAAAGAATCCCCAACCAAC+AGG - chr7_1:6737134-6737153 None:intergenic 50.0%
TGTGAACCATGGGATTTGCC+AGG + chr7_1:6737248-6737267 Msa1007310:CDS 50.0%
AACTCACCTGGCAAATCCCA+TGG - chr7_1:6737257-6737276 None:intergenic 50.0%
AAGTTGTGACGACTGGGGTT+TGG + chr7_1:6737762-6737781 Msa1007310:intron 50.0%
TTTGGCAAGGAGAAAGCGAG+TGG + chr7_1:6737780-6737799 Msa1007310:intron 50.0%
CCCGCCTATTAGTGTCATGT+TGG - chr7_1:6737912-6737931 None:intergenic 50.0%
GCTGGCTATTGGAAAGCAAC+GGG + chr7_1:6738152-6738171 Msa1007310:CDS 50.0%
CTGGCTATTGGAAAGCAACG+GGG + chr7_1:6738153-6738172 Msa1007310:CDS 50.0%
CGAGCGGTGAAAAAACCAAC+TGG + chr7_1:6738252-6738271 Msa1007310:CDS 50.0%
CAACCTATCCACGCATGGAA+TGG + chr7_1:6738337-6738356 Msa1007310:CDS 50.0%
! CCCAACCATTGAGGTTTGGT+TGG - chr7_1:6739232-6739251 None:intergenic 50.0%
ACCAGCTTCTACTGGACTTG+CGG + chr7_1:6739380-6739399 Msa1007310:intron 50.0%
GTATAGGCCAAATACCTCCC+TGG + chr7_1:6739838-6739857 Msa1007310:intron 50.0%
!! AAAGGACCCAGGGAGGTATT+TGG - chr7_1:6740090-6740109 None:intergenic 50.0%
GAAACTTAAAGGACCCAGGG+AGG - chr7_1:6740083-6740102 None:intergenic 50.0%
GAAACTTAAAGGACCCAGGG+AGG + chr7_1:6740083-6740102 Msa1007310:intron 50.0%
!! AAAGGACCCAGGGAGGTATT+TGG + chr7_1:6740090-6740109 Msa1007310:intron 50.0%
TACAGAGGAAGAGCTCCGAG+CGG + chr7_1:6738236-6738255 Msa1007310:CDS 55.0%
TGCGTGGATAGGTTGTGCTC+AGG - chr7_1:6738332-6738351 None:intergenic 55.0%
GAGCACAACCTATCCACGCA+TGG + chr7_1:6738332-6738351 Msa1007310:CDS 55.0%
GTGACGACTGGGGTTTGGCA+AGG + chr7_1:6737767-6737786 Msa1007310:intron 60.0%
GCCGCAAGTCCAGTAGAAGC+TGG - chr7_1:6739384-6739403 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 6737107 6740399 6737107 ID=Msa1007310;Name=Msa1007310
chr7_1 mRNA 6737107 6740399 6737107 ID=Msa1007310-mRNA-1;Parent=Msa1007310;Name=Msa1007310-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|0.66|1|1|3|0|161
chr7_1 exon 6737107 6737269 6737107 ID=Msa1007310-mRNA-1:exon:1995;Parent=Msa1007310-mRNA-1
chr7_1 exon 6738060 6738358 6738060 ID=Msa1007310-mRNA-1:exon:1996;Parent=Msa1007310-mRNA-1
chr7_1 exon 6740376 6740399 6740376 ID=Msa1007310-mRNA-1:exon:1997;Parent=Msa1007310-mRNA-1
chr7_1 CDS 6737107 6737269 6737107 ID=Msa1007310-mRNA-1:cds;Parent=Msa1007310-mRNA-1
chr7_1 CDS 6738060 6738358 6738060 ID=Msa1007310-mRNA-1:cds;Parent=Msa1007310-mRNA-1
chr7_1 CDS 6740376 6740399 6740376 ID=Msa1007310-mRNA-1:cds;Parent=Msa1007310-mRNA-1
Gene Sequence

>Msa1007310

ATGGAAAATGAAAAGGTCAAATTTCCTGTTGGTTGGGGATTCTTTCCGACCGATGAAGAACTTATAAATCAATACCTTGTTAAGAAGGTTGATGACAATAGCTTCTGTGCTATAGCTATTGCCGAAGTTGATATGAATAAGTGTGAACCATGGGATTTGCCAGAGATGGCTAAAATGGGAGAAACAGAATGGTATTTTTTCTGTGTGAGGGACAGAAAATACCCAACTGGTCAAAGGACCAATAGAGCTACTAATGCTGGCTATTGGAAAGCAACGGGGAAAGACAAAGAGATTTACAAGGGAAATTCATTAATTGGGATGAAAAAAACACTGGTTTTCTACAGAGGAAGAGCTCCGAGCGGTGAAAAAACCAACTGGGTCATGCATGAATACCGATTGGAGGGAAACTCACTCTCTGAGTACAACTTTTTTCCTGAGCACAACCTATCCACGCATGGAATGGCAAACTTTCATGTCACTAAGTGA
Protein sequence

>Msa1007310

MENEKVKFPVGWGFFPTDEELINQYLVKKVDDNSFCAIAIAEVDMNKCEPWDLPEMAKMGETEWYFFCVRDRKYPTGQRTNRATNAGYWKATGKDKEIYKGNSLIGMKKTLVFYRGRAPSGEKTNWVMHEYRLEGNSLSEYNFFPEHNLSTHGMANFHVTK*