AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1007330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1007330 MtrunA17_Chr7g0217711 80.519 154 5 1 1 129 12 165 3.21e-85 246
Msa1007330 MtrunA17_Chr7g0217721 78.750 160 3 2 1 129 12 171 1.52e-82 245
Msa1007330 MtrunA17_Chr4g0060931 61.972 142 28 2 2 118 11 151 7.11e-52 167
Msa1007330 MtrunA17_Chr6g0453451 62.121 132 25 1 3 109 15 146 5.59e-50 161
Msa1007330 MtrunA17_Chr3g0091921 59.859 142 31 2 2 118 10 150 2.64e-49 159
Msa1007330 MtrunA17_Chr2g0316971 64.567 127 18 2 11 110 26 152 8.95e-47 154
Msa1007330 MtrunA17_Chr3g0113031 83.333 84 8 1 46 129 3 80 2.30e-46 150
Msa1007330 MtrunA17_Chr6g0461661 56.643 143 34 3 3 118 13 154 3.06e-46 153
Msa1007330 MtrunA17_Chr6g0484441 59.055 127 27 1 8 109 5 131 4.97e-46 151
Msa1007330 MtrunA17_Chr3g0113001 80.723 83 10 1 47 129 29 105 3.89e-43 143
Msa1007330 MtrunA17_Chr7g0253011 53.425 146 38 4 2 118 11 155 1.21e-42 144
Msa1007330 MtrunA17_Chr3g0139331 53.285 137 37 2 8 117 11 147 2.43e-42 142
Msa1007330 MtrunA17_Chr1g0147421 53.623 138 36 3 8 117 27 164 1.34e-40 138
Msa1007330 MtrunA17_Chr3g0144271 54.348 138 35 3 8 117 23 160 1.05e-39 137
Msa1007330 MtrunA17_Chr4g0056541 51.163 129 35 1 11 111 10 138 1.24e-37 130
Msa1007330 MtrunA17_Chr4g0018391 50.000 130 37 1 10 111 9 138 3.30e-37 129
Msa1007330 MtrunA17_Chr5g0405211 46.763 139 46 1 1 111 1 139 1.80e-36 127
Msa1007330 MtrunA17_Chr8g0372121 49.606 127 36 1 11 109 9 135 5.11e-36 125
Msa1007330 MtrunA17_Chr4g0017921 52.344 128 33 1 10 109 10 137 6.86e-36 125
Msa1007330 MtrunA17_Chr5g0398971 50.000 130 36 2 11 111 10 139 6.96e-36 125
Msa1007330 MtrunA17_Chr8g0346001 47.222 144 48 1 3 118 10 153 8.11e-36 127
Msa1007330 MtrunA17_Chr2g0309331 51.538 130 34 2 11 111 13 142 1.25e-35 125
Msa1007330 MtrunA17_Chr8g0359921 46.043 139 49 2 5 118 11 148 3.78e-35 123
Msa1007330 MtrunA17_Chr2g0312321 49.242 132 38 3 5 110 8 136 6.93e-35 122
Msa1007330 MtrunA17_Chr7g0214071 48.092 131 44 2 2 108 9 139 2.53e-34 119
Msa1007330 MtrunA17_Chr6g0481091 46.565 131 43 1 6 109 4 134 4.70e-34 118
Msa1007330 MtrunA17_Chr3g0128111 50.000 124 35 1 11 107 45 168 9.02e-34 117
Msa1007330 MtrunA17_Chr5g0428991 48.438 128 39 1 7 107 24 151 1.33e-33 122
Msa1007330 MtrunA17_Chr3g0128151 50.806 124 34 1 11 107 25 148 1.57e-33 122
Msa1007330 MtrunA17_Chr2g0318081 43.609 133 50 1 5 112 13 145 3.68e-33 118
Msa1007330 MtrunA17_Chr1g0200561 46.825 126 39 1 10 107 21 146 7.96e-33 117
Msa1007330 MtrunA17_Chr2g0309891 45.000 140 46 2 6 114 4 143 2.03e-32 116
Msa1007330 MtrunA17_Chr4g0042561 45.985 137 47 2 7 116 8 144 6.14e-32 114
Msa1007330 MtrunA17_Chr5g0417791 45.802 131 46 1 6 111 1 131 8.26e-32 113
Msa1007330 MtrunA17_Chr5g0433781 45.038 131 45 1 6 109 4 134 1.18e-31 117
Msa1007330 MtrunA17_Chr3g0109821 44.275 131 46 1 6 109 4 134 4.05e-31 116
Msa1007330 MtrunA17_Chr3g0130731 44.186 129 46 2 5 108 4 131 4.39e-31 112
Msa1007330 MtrunA17_Chr3g0124761 42.636 129 48 2 5 108 4 131 4.65e-31 112
Msa1007330 MtrunA17_Chr2g0318101 42.963 135 50 2 4 111 11 145 1.49e-30 112
Msa1007330 MtrunA17_Chr8g0384721 42.254 142 52 3 6 118 5 145 1.52e-30 110
Msa1007330 MtrunA17_Chr7g0263931 42.143 140 54 2 5 117 8 147 2.17e-30 110
Msa1007330 MtrunA17_Chr8g0364791 42.222 135 51 1 7 114 5 139 4.42e-30 112
Msa1007330 MtrunA17_Chr1g0183741 42.857 126 45 2 11 109 13 138 5.60e-30 108
Msa1007330 MtrunA17_Chr4g0047841 42.963 135 46 3 10 117 17 147 9.35e-30 109
Msa1007330 MtrunA17_Chr4g0054791 42.963 135 47 2 4 108 2 136 3.33e-29 107
Msa1007330 MtrunA17_Chr7g0261411 42.520 127 46 2 10 109 12 138 7.83e-29 106
Msa1007330 MtrunA17_Chr5g0400461 43.609 133 41 2 10 108 8 140 8.26e-29 107
Msa1007330 MtrunA17_Chr1g0197361 44.361 133 46 2 11 115 11 143 9.36e-29 109
Msa1007330 MtrunA17_Chr3g0092671 44.361 133 46 2 11 115 8 140 1.54e-28 108
Msa1007330 MtrunA17_Chr7g0252971 40.690 145 52 2 1 111 1 145 1.57e-28 106
Msa1007330 MtrunA17_Chr3g0130101 40.741 135 53 1 11 118 10 144 4.34e-28 105
Msa1007330 MtrunA17_Chr1g0201021 41.538 130 49 1 11 113 22 151 9.33e-28 106
Msa1007330 MtrunA17_Chr8g0384201 40.000 135 54 1 7 114 5 139 1.04e-27 105
Msa1007330 MtrunA17_Chr2g0326361 42.969 128 46 2 8 108 14 141 1.12e-27 103
Msa1007330 MtrunA17_Chr1g0197351 45.968 124 40 1 10 106 44 167 1.87e-27 105
Msa1007330 MtrunA17_Chr2g0311661 39.216 153 58 3 1 118 9 161 1.35e-26 100
Msa1007330 MtrunA17_Chr2g0311651 39.855 138 53 2 11 118 25 162 5.34e-26 99.0
Msa1007330 MtrunA17_Chr8g0361731 41.600 125 46 2 11 108 17 141 1.72e-25 99.0
Msa1007330 MtrunA17_Chr5g0417001 42.400 125 45 2 11 108 17 141 2.44e-25 98.6
Msa1007330 MtrunA17_Chr3g0113011 84.000 50 8 0 1 50 12 61 3.01e-25 90.9
Msa1007330 MtrunA17_Chr3g0113041 86.000 50 7 0 1 50 12 61 6.25e-25 90.1
Msa1007330 MtrunA17_Chr6g0453131 41.935 124 46 2 11 108 18 141 8.40e-25 97.1
Msa1007330 MtrunA17_Chr8g0385991 38.346 133 57 2 1 108 7 139 2.36e-24 93.2
Msa1007330 MtrunA17_Chr4g0076731 41.600 125 47 2 10 108 56 180 5.37e-24 95.1
Msa1007330 MtrunA17_Chr8g0345691 44.882 127 39 5 10 106 14 139 3.89e-23 92.8
Msa1007330 MtrunA17_Chr4g0038751 41.429 140 53 5 1 112 9 147 6.81e-23 90.9
Msa1007330 MtrunA17_Chr2g0321741 53.030 66 31 0 47 112 57 122 7.59e-23 91.3
Msa1007330 MtrunA17_Chr8g0345671 45.669 127 38 5 10 106 13 138 1.16e-22 91.3
Msa1007330 MtrunA17_Chr5g0442771 37.143 140 60 2 11 122 21 160 3.19e-22 89.0
Msa1007330 MtrunA17_Chr2g0321631 37.692 130 49 3 10 107 6 135 1.42e-21 86.3
Msa1007330 MtrunA17_Chr7g0243371 42.045 88 41 2 34 111 7 94 7.71e-21 81.3
Msa1007330 MtrunA17_Chr3g0131911 37.037 135 58 2 1 108 7 141 1.94e-20 83.2
Msa1007330 MtrunA17_Chr4g0026141 38.168 131 50 3 8 107 5 135 7.10e-20 82.0
Msa1007330 MtrunA17_Chr4g0050701 38.136 118 54 3 10 108 13 130 7.34e-20 80.5
Msa1007330 MtrunA17_Chr7g0266701 35.659 129 51 3 11 107 7 135 7.33e-18 76.6
Msa1007330 MtrunA17_Chr8g0345711 39.370 127 46 4 10 106 14 139 2.21e-17 73.6
Msa1007330 MtrunA17_Chr8g0345721 30.769 156 48 5 10 106 37 191 2.86e-13 63.5
Msa1007330 MtrunA17_Chr8g0345741 43.902 82 39 4 27 106 42 118 5.91e-12 59.3
Msa1007330 MtrunA17_Chr8g0384351 34.146 123 56 4 6 111 8 122 1.74e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1007330 AT5G61430.1 61.268 142 29 2 2 118 10 150 8.27e-52 167
Msa1007330 AT5G07680.1 59.155 142 32 2 2 118 11 151 5.48e-50 162
Msa1007330 AT5G07680.2 61.029 136 27 2 8 118 3 137 8.12e-49 158
Msa1007330 AT3G29035.1 60.448 134 28 1 2 110 18 151 8.94e-49 158
Msa1007330 AT5G39610.1 58.955 134 30 1 2 110 14 147 1.01e-46 152
Msa1007330 AT3G18400.1 57.812 128 29 1 8 110 5 132 5.57e-45 149
Msa1007330 AT5G53950.1 61.417 127 22 2 11 110 20 146 8.58e-45 149
Msa1007330 AT5G18270.2 57.143 133 31 2 4 110 17 149 2.10e-44 147
Msa1007330 AT5G18270.1 57.143 133 31 2 4 110 17 149 2.47e-44 147
Msa1007330 AT3G04060.1 54.545 143 38 3 2 118 14 155 8.96e-44 146
Msa1007330 AT3G15170.1 59.843 127 24 2 11 110 23 149 5.82e-43 143
Msa1007330 AT2G24430.2 55.147 136 34 2 4 112 12 147 7.07e-43 143
Msa1007330 AT2G24430.1 55.147 136 34 2 4 112 12 147 7.07e-43 143
Msa1007330 AT1G76420.1 52.206 136 38 2 8 116 22 157 1.25e-39 135
Msa1007330 AT5G61430.2 79.452 73 14 1 46 118 16 87 7.04e-37 127
Msa1007330 AT1G12260.2 51.163 129 35 1 11 111 10 138 7.72e-37 128
Msa1007330 AT1G12260.1 51.969 127 33 1 11 109 10 136 1.33e-36 129
Msa1007330 AT2G46770.1 46.528 144 49 1 3 118 11 154 2.41e-36 127
Msa1007330 AT4G36160.1 45.985 137 46 1 3 111 5 141 8.10e-36 126
Msa1007330 AT4G36160.3 45.985 137 46 1 3 111 5 141 8.10e-36 126
Msa1007330 AT4G36160.2 45.985 137 46 1 3 111 9 145 9.23e-36 126
Msa1007330 AT2G18060.3 47.059 136 44 1 4 111 5 140 9.63e-36 126
Msa1007330 AT2G18060.1 47.059 136 44 1 4 111 5 140 9.63e-36 126
Msa1007330 AT1G62700.1 52.756 127 32 1 11 109 10 136 1.38e-35 126
Msa1007330 AT1G62700.2 52.756 127 32 1 11 109 10 136 1.38e-35 126
Msa1007330 AT4G10350.1 51.181 127 34 1 11 109 12 138 3.18e-35 124
Msa1007330 AT1G71930.2 45.113 133 45 1 10 114 11 143 4.03e-35 123
Msa1007330 AT1G71930.1 45.113 133 45 1 10 114 11 143 4.03e-35 123
Msa1007330 AT5G62380.2 48.819 127 37 1 11 109 10 136 9.59e-35 123
Msa1007330 AT5G62380.1 48.819 127 37 1 11 109 10 136 9.59e-35 123
Msa1007330 AT1G32770.1 47.143 140 46 1 3 114 11 150 1.11e-34 123
Msa1007330 AT3G61910.1 45.324 139 48 1 3 113 6 144 1.26e-34 122
Msa1007330 AT1G33280.1 49.219 128 37 1 10 109 10 137 1.81e-34 121
Msa1007330 AT1G56010.2 45.113 133 47 2 5 111 16 148 4.05e-34 120
Msa1007330 AT1G33060.1 47.692 130 41 1 11 113 27 156 6.66e-34 124
Msa1007330 AT1G33060.2 47.692 130 41 1 11 113 27 156 7.28e-34 124
Msa1007330 AT5G66300.1 48.000 125 37 1 10 106 14 138 1.01e-33 119
Msa1007330 AT3G12977.1 44.531 128 46 1 11 113 21 148 1.01e-33 119
Msa1007330 AT4G35580.1 49.194 124 36 3 11 107 12 135 1.25e-33 122
Msa1007330 AT4G35580.2 49.194 124 36 3 11 107 12 135 1.47e-33 122
Msa1007330 AT4G35580.3 49.194 124 36 3 11 107 12 135 1.52e-33 122
Msa1007330 AT5G13180.1 43.939 132 50 2 1 108 7 138 4.24e-33 116
Msa1007330 AT2G33480.1 44.928 138 51 2 6 118 13 150 5.46e-33 116
Msa1007330 AT2G33480.2 47.200 125 44 1 6 108 13 137 6.48e-33 116
Msa1007330 AT5G04410.1 47.727 132 42 1 11 115 12 143 8.80e-33 120
Msa1007330 AT3G17730.1 45.038 131 45 1 6 109 4 134 9.51e-33 115
Msa1007330 AT3G10500.1 46.970 132 43 1 11 115 12 143 1.20e-32 120
Msa1007330 AT3G10490.1 50.400 125 35 1 11 108 30 154 1.33e-32 115
Msa1007330 AT3G15500.1 43.411 129 48 1 5 108 11 139 1.49e-32 116
Msa1007330 AT1G52890.1 44.186 129 47 1 5 108 11 139 1.88e-32 116
Msa1007330 AT3G10480.1 50.400 125 35 1 11 108 30 154 3.42e-32 118
Msa1007330 AT3G10480.2 50.400 125 35 1 11 108 30 154 4.04e-32 117
Msa1007330 AT5G08790.1 45.736 129 44 2 5 108 4 131 5.05e-32 114
Msa1007330 AT1G79580.3 47.015 134 42 2 5 109 14 147 6.39e-32 116
Msa1007330 AT1G79580.5 47.015 134 42 2 5 109 14 147 6.39e-32 116
Msa1007330 AT1G79580.4 47.015 134 42 2 5 109 14 147 6.39e-32 116
Msa1007330 AT1G79580.2 47.015 134 42 2 5 109 14 147 6.39e-32 116
Msa1007330 AT1G79580.1 47.015 134 42 2 5 109 14 147 6.39e-32 116
Msa1007330 AT1G01720.1 43.511 131 48 2 3 108 2 131 6.92e-32 114
Msa1007330 AT1G65910.1 44.275 131 46 1 6 109 4 134 8.46e-32 118
Msa1007330 AT4G27410.2 42.636 129 49 1 5 108 11 139 8.75e-32 114
Msa1007330 AT3G10490.2 50.400 125 35 1 11 108 30 154 8.83e-32 117
Msa1007330 AT2G27300.1 44.444 126 44 1 11 110 17 142 1.27e-31 114
Msa1007330 AT5G46590.2 46.269 134 44 2 10 115 8 141 1.38e-31 113
Msa1007330 AT5G46590.1 46.269 134 44 2 10 115 8 141 2.11e-31 113
Msa1007330 AT3G49530.1 44.444 135 47 2 11 117 16 150 2.67e-31 115
Msa1007330 AT3G49530.2 44.444 135 47 2 11 117 16 150 3.06e-31 115
Msa1007330 AT1G61110.1 45.038 131 46 2 10 114 18 148 5.96e-31 112
Msa1007330 AT1G77450.1 43.750 128 46 2 6 108 8 134 1.14e-30 110
Msa1007330 AT3G03200.1 45.802 131 44 1 6 109 4 134 1.91e-30 113
Msa1007330 AT5G17260.1 45.038 131 45 1 6 109 4 134 2.77e-30 113
Msa1007330 AT5G63790.1 44.186 129 46 2 5 108 47 174 2.99e-30 110
Msa1007330 AT5G63790.2 44.186 129 46 2 5 108 57 184 3.45e-30 110
Msa1007330 AT1G54330.1 46.923 130 42 1 6 108 4 133 1.79e-29 108
Msa1007330 AT5G24590.2 44.800 125 41 2 11 107 16 140 3.72e-29 109
Msa1007330 AT1G69490.1 45.968 124 42 1 10 108 11 134 4.87e-29 106
Msa1007330 AT4G27410.3 37.671 146 49 1 5 108 11 156 4.98e-29 107
Msa1007330 AT3G04070.2 43.357 143 50 3 2 114 4 145 5.46e-29 107
Msa1007330 AT5G09330.5 39.007 141 59 1 5 118 3 143 6.66e-29 109
Msa1007330 AT5G09330.2 39.007 141 59 1 5 118 3 143 6.66e-29 109
Msa1007330 AT5G09330.4 39.007 141 59 1 5 118 3 143 6.66e-29 109
Msa1007330 AT5G09330.3 39.007 141 59 1 5 118 3 143 6.66e-29 109
Msa1007330 AT5G09330.1 39.007 141 59 1 5 118 3 143 6.66e-29 109
Msa1007330 AT3G04070.1 43.357 143 50 3 2 114 4 145 9.94e-29 107
Msa1007330 AT5G22290.1 41.085 129 50 1 11 113 24 152 1.53e-28 106
Msa1007330 AT3G15510.1 44.355 124 42 2 12 108 21 144 1.60e-28 107
Msa1007330 AT4G17980.1 45.669 127 40 2 11 108 9 135 2.07e-28 104
Msa1007330 AT5G64060.1 37.589 141 61 1 5 118 3 143 3.10e-28 106
Msa1007330 AT4G17980.2 45.669 127 40 2 11 108 9 135 5.06e-28 104
Msa1007330 AT1G56010.1 66.667 66 22 0 46 111 16 81 9.66e-28 102
Msa1007330 AT3G44290.2 41.860 129 49 1 11 113 17 145 1.01e-27 102
Msa1007330 AT1G34180.3 42.336 137 51 2 7 115 14 150 1.98e-27 105
Msa1007330 AT5G39820.1 41.429 140 55 2 11 123 23 162 2.45e-27 103
Msa1007330 AT1G34190.1 41.606 137 52 2 7 115 14 150 2.76e-27 105
Msa1007330 AT1G34180.1 42.336 137 51 2 7 115 14 150 3.07e-27 105
Msa1007330 AT3G12977.2 63.235 68 25 0 46 113 28 95 3.74e-27 100
Msa1007330 AT3G44290.1 41.860 129 49 1 11 113 17 145 8.97e-27 102
Msa1007330 AT4G10350.2 68.750 64 20 0 46 109 28 91 9.29e-27 101
Msa1007330 AT1G34180.4 38.926 149 51 2 7 115 14 162 1.19e-25 100
Msa1007330 AT1G34180.2 38.926 149 51 2 7 115 14 162 1.31e-25 100
Msa1007330 AT4G28530.1 38.356 146 47 3 7 109 9 154 1.52e-25 99.0
Msa1007330 AT1G26870.1 42.742 124 44 2 11 107 19 142 2.78e-25 99.0
Msa1007330 AT3G10480.3 68.750 64 20 0 45 108 124 187 5.69e-25 99.0
Msa1007330 AT1G32510.1 39.161 143 53 2 10 118 8 150 7.74e-25 95.9
Msa1007330 AT2G02450.1 40.909 132 52 2 11 116 54 185 7.84e-25 97.4
Msa1007330 AT2G02450.2 40.909 132 52 2 11 116 54 185 9.97e-25 97.4
Msa1007330 AT2G43000.1 37.500 128 55 1 10 112 20 147 1.82e-24 94.7
Msa1007330 AT1G52880.1 42.636 129 45 2 12 111 21 149 4.43e-24 94.7
Msa1007330 AT2G33480.3 56.757 74 29 1 48 118 20 93 1.16e-23 91.3
Msa1007330 AT1G32870.3 43.077 130 49 1 11 115 49 178 2.58e-23 94.4
Msa1007330 AT1G32870.1 43.077 130 49 1 11 115 13 142 2.78e-23 94.0
Msa1007330 AT1G32870.2 43.077 130 49 1 11 115 13 142 2.83e-23 94.0
Msa1007330 AT3G12910.1 39.706 136 53 3 2 108 15 150 5.49e-23 91.3
Msa1007330 AT3G10490.4 73.585 53 14 0 56 108 2 54 6.11e-22 89.4
Msa1007330 AT3G10490.3 73.585 53 14 0 56 108 2 54 6.11e-22 89.4
Msa1007330 AT2G18060.2 68.627 51 16 0 61 111 2 52 1.35e-20 84.7
Msa1007330 AT2G17040.1 40.000 135 52 4 10 115 8 142 6.49e-20 82.8
Msa1007330 AT5G04395.1 37.324 142 48 2 11 111 31 172 1.48e-19 80.1
Msa1007330 AT5G22290.2 59.615 52 21 0 62 113 2 53 3.57e-19 80.1
Msa1007330 AT4G01550.1 39.552 134 50 5 6 108 2 135 5.20e-19 81.6
Msa1007330 AT5G22380.1 35.156 128 51 3 11 106 8 135 4.39e-18 77.4
Msa1007330 AT2G43000.2 46.970 66 35 0 47 112 4 69 9.65e-18 75.5
Msa1007330 AT3G44350.1 33.557 149 63 5 7 119 4 152 9.75e-18 74.7
Msa1007330 AT3G44350.2 33.333 150 67 5 7 123 4 153 4.71e-17 74.7
Msa1007330 AT4G01540.3 33.562 146 57 5 11 124 7 144 6.59e-16 72.8
Msa1007330 AT4G01540.1 33.562 146 57 5 11 124 7 144 6.61e-16 73.2
Msa1007330 AT4G01540.4 33.562 146 57 5 11 124 7 144 7.33e-16 72.8
Msa1007330 AT4G01540.2 33.562 146 57 5 11 124 7 144 7.58e-16 72.8
Msa1007330 AT4G01520.1 31.788 151 63 6 6 124 2 144 1.23e-15 71.6
Msa1007330 AT3G04420.2 33.846 130 49 2 10 106 5 130 3.18e-15 70.5
Msa1007330 AT3G04420.1 33.846 130 49 2 10 106 5 130 5.00e-15 70.1
Msa1007330 AT1G01010.1 32.237 152 56 6 11 125 6 147 7.55e-14 67.0
Msa1007330 AT3G56530.1 28.148 135 69 2 5 111 49 183 2.16e-12 62.8
Msa1007330 AT5G50820.1 29.787 141 78 4 1 120 10 150 3.29e-12 60.8
Msa1007330 AT1G02230.1 34.884 129 49 6 10 106 5 130 1.42e-11 60.5
Msa1007330 AT1G02220.1 32.800 125 52 3 11 106 6 127 1.52e-11 60.5

Find 29 sgRNAs with CRISPR-Local

Find 194 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAAGGGAAATTCATTAAT+CGG 0.266589 7_1:+6773247 Msa1007330:CDS
ATCGGTTGTGCTCAGGAAAA+AGG 0.384221 7_1:-6773378 None:intergenic
GAGCTACTAATGCTGGCTAT+TGG 0.387868 7_1:+6773197 Msa1007330:CDS
GCCAGCATTAGTAGCTCTAT+TGG 0.388516 7_1:-6773191 None:intergenic
TATTGGTCCTTTGACCAGTT+GGG 0.417126 7_1:-6773174 None:intergenic
ACAAGGGAAATTCATTAATC+GGG 0.420542 7_1:+6773248 Msa1007330:CDS
CTATTGGTCCTTTGACCAGT+TGG 0.441493 7_1:-6773175 None:intergenic
GAAAAGGTCAAATTTGATGC+TGG 0.459107 7_1:+6772294 Msa1007330:CDS
AAATCAATACCTTGTCAAGA+AGG 0.466786 7_1:+6772350 Msa1007330:CDS
GCTGGCTATTGGAAAGCAAC+AGG 0.467708 7_1:+6773208 Msa1007330:CDS
ACCAATAGAGCTACTAATGC+TGG 0.495849 7_1:+6773190 Msa1007330:CDS
TTGATTTATAAGCTCTTCAT+CGG 0.497039 7_1:-6772334 None:intergenic
TTTATAAGCTCTTCATCGGT+CGG 0.536559 7_1:-6772330 None:intergenic
AGGGACAGAAAATACCCAAC+TGG 0.538414 7_1:+6773160 Msa1007330:intron
CAACCGATCCACACATGGAA+TGG 0.549333 7_1:+6773393 Msa1007330:CDS
TGTGTGGATCGGTTGTGCTC+AGG 0.549723 7_1:-6773385 None:intergenic
TTACCATTCCATGTGTGGAT+CGG 0.563735 7_1:-6773396 None:intergenic
GTATTCATGCATGACCCAGT+TGG 0.566311 7_1:-6773323 None:intergenic
CAAAGACAAAGAGATTTACA+AGG 0.568333 7_1:+6773231 Msa1007330:CDS
CAATATTACCATTCCATGTG+TGG 0.569497 7_1:-6773401 None:intergenic
AGAGTGAGTTACCCTCCAAT+CGG 0.585613 7_1:-6773345 None:intergenic
GGTCATGCATGAATACCGAT+TGG 0.588791 7_1:+6773330 Msa1007330:CDS
CATGCATGAATACCGATTGG+AGG 0.592763 7_1:+6773333 Msa1007330:CDS
GAAAATACCCAACTGGTCAA+AGG 0.598845 7_1:+6773167 Msa1007330:intron
ATGCATGAATACCGATTGGA+GGG 0.621001 7_1:+6773334 Msa1007330:CDS
GAGCACAACCGATCCACACA+TGG 0.630980 7_1:+6773388 Msa1007330:CDS
TGTCATCAACCTTCTTGACA+AGG 0.634308 7_1:-6772359 None:intergenic
AAAGACAAAGAGATTTACAA+GGG 0.662925 7_1:+6773232 Msa1007330:CDS
TACATAGGAAGAGCTCCAAG+AGG 0.736988 7_1:+6773292 Msa1007330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTGAATTTAATGTTTTTTAT+AGG + chr7_1:6772448-6772467 Msa1007330:intron 15.0%
!! AAAAAGAAAGAAAAACAATT+TGG + chr7_1:6772771-6772790 Msa1007330:intron 15.0%
!!! AATTATGCTTTCTTATTTTT+TGG + chr7_1:6773084-6773103 Msa1007330:intron 15.0%
!!! GTGAATTTAATGTTTTTTAT+AGG + chr7_1:6772448-6772467 Msa1007330:intron 15.0%
!! AAAAAGAAAGAAAAACAATT+TGG + chr7_1:6772771-6772790 Msa1007330:intron 15.0%
!!! AATTATGCTTTCTTATTTTT+TGG + chr7_1:6773084-6773103 Msa1007330:intron 15.0%
!! TAAAAAACATTAAATTCACC+TGG - chr7_1:6772447-6772466 None:intergenic 20.0%
!!! AAAATTTGCTCAAATTACAA+GGG + chr7_1:6772640-6772659 Msa1007330:intron 20.0%
!! TAAAAAACATTAAATTCACC+TGG - chr7_1:6772447-6772466 None:intergenic 20.0%
!!! AAAATTTGCTCAAATTACAA+GGG + chr7_1:6772640-6772659 Msa1007330:intron 20.0%
! TTGATTTATAAGCTCTTCAT+CGG - chr7_1:6772337-6772356 None:intergenic 25.0%
! ATATGAATAAGTTTGAACCA+TGG + chr7_1:6772415-6772434 Msa1007330:intron 25.0%
! TATGAATAAGTTTGAACCAT+GGG + chr7_1:6772416-6772435 Msa1007330:intron 25.0%
! ACTGTACAAAATCAATGATA+TGG + chr7_1:6772573-6772592 Msa1007330:intron 25.0%
!! CTTGTAATTTGAGCAAATTT+TGG - chr7_1:6772641-6772660 None:intergenic 25.0%
!! CAAAATTTGCTCAAATTACA+AGG + chr7_1:6772639-6772658 Msa1007330:intron 25.0%
!! AAATTTGCTCAAATTACAAG+GGG + chr7_1:6772641-6772660 Msa1007330:intron 25.0%
! TCATAAAAACATACCAAAGA+AGG + chr7_1:6772715-6772734 Msa1007330:intron 25.0%
!!! TTTTTTGGTTTATTCAGTGA+TGG + chr7_1:6773099-6773118 Msa1007330:intron 25.0%
! AAAGACAAAGAGATTTACAA+GGG + chr7_1:6773232-6773251 Msa1007330:CDS 25.0%
! TACAAGGGAAATTCATTAAT+CGG + chr7_1:6773247-6773266 Msa1007330:CDS 25.0%
! TTGATTTATAAGCTCTTCAT+CGG - chr7_1:6772337-6772356 None:intergenic 25.0%
! ATATGAATAAGTTTGAACCA+TGG + chr7_1:6772415-6772434 Msa1007330:intron 25.0%
! TATGAATAAGTTTGAACCAT+GGG + chr7_1:6772416-6772435 Msa1007330:intron 25.0%
! ACTGTACAAAATCAATGATA+TGG + chr7_1:6772573-6772592 Msa1007330:intron 25.0%
!! CTTGTAATTTGAGCAAATTT+TGG - chr7_1:6772641-6772660 None:intergenic 25.0%
!! CAAAATTTGCTCAAATTACA+AGG + chr7_1:6772639-6772658 Msa1007330:intron 25.0%
!! AAATTTGCTCAAATTACAAG+GGG + chr7_1:6772641-6772660 Msa1007330:intron 25.0%
! TCATAAAAACATACCAAAGA+AGG + chr7_1:6772715-6772734 Msa1007330:intron 25.0%
!!! TTTTTTGGTTTATTCAGTGA+TGG + chr7_1:6773099-6773118 Msa1007330:intron 25.0%
! AAAGACAAAGAGATTTACAA+GGG + chr7_1:6773232-6773251 Msa1007330:CDS 25.0%
! TACAAGGGAAATTCATTAAT+CGG + chr7_1:6773247-6773266 Msa1007330:CDS 25.0%
AAATCAATACCTTGTCAAGA+AGG + chr7_1:6772350-6772369 Msa1007330:CDS 30.0%
GAAATGGTCTATATTATAGG+GGG - chr7_1:6772522-6772541 None:intergenic 30.0%
GGAAATGGTCTATATTATAG+GGG - chr7_1:6772523-6772542 None:intergenic 30.0%
CGGAAATGGTCTATATTATA+GGG - chr7_1:6772524-6772543 None:intergenic 30.0%
CCTATAATATAGACCATTTC+CGG + chr7_1:6772522-6772541 Msa1007330:intron 30.0%
CTATAATATAGACCATTTCC+GGG + chr7_1:6772523-6772542 Msa1007330:intron 30.0%
TACAAAATCAATGATATGGC+AGG + chr7_1:6772577-6772596 Msa1007330:intron 30.0%
ACAAAATCAATGATATGGCA+GGG + chr7_1:6772578-6772597 Msa1007330:intron 30.0%
! AATTTGCTCAAATTACAAGG+GGG + chr7_1:6772642-6772661 Msa1007330:intron 30.0%
CACATAATTTAAGCCTTCTT+TGG - chr7_1:6772731-6772750 None:intergenic 30.0%
CAAAGAAGGCTTAAATTATG+TGG + chr7_1:6772729-6772748 Msa1007330:intron 30.0%
GAAAGAAAAACAATTTGGAG+TGG + chr7_1:6772776-6772795 Msa1007330:intron 30.0%
! CTTTTCTCCTTACAAATGAA+GGG - chr7_1:6772832-6772851 None:intergenic 30.0%
! TCTTTTCTCCTTACAAATGA+AGG - chr7_1:6772833-6772852 None:intergenic 30.0%
AAGAAACGAGAATATATCGA+AGG - chr7_1:6772872-6772891 None:intergenic 30.0%
ATTCTCGTTTCTTACTTTGA+TGG + chr7_1:6772879-6772898 Msa1007330:intron 30.0%
TTATTCAGTGATGGCTAAAA+TGG + chr7_1:6773108-6773127 Msa1007330:intron 30.0%
TATTCAGTGATGGCTAAAAT+GGG + chr7_1:6773109-6773128 Msa1007330:intron 30.0%
!!! AATGGTATTTTTTCTGTGTG+AGG + chr7_1:6773140-6773159 Msa1007330:intron 30.0%
!!! ATGGTATTTTTTCTGTGTGA+GGG + chr7_1:6773141-6773160 Msa1007330:intron 30.0%
CAAAGACAAAGAGATTTACA+AGG + chr7_1:6773231-6773250 Msa1007330:CDS 30.0%
ACAAGGGAAATTCATTAATC+GGG + chr7_1:6773248-6773267 Msa1007330:CDS 30.0%
!!! AAAACACTGGTTTTCTACAT+AGG + chr7_1:6773277-6773296 Msa1007330:CDS 30.0%
AAATCAATACCTTGTCAAGA+AGG + chr7_1:6772350-6772369 Msa1007330:CDS 30.0%
GAAATGGTCTATATTATAGG+GGG - chr7_1:6772522-6772541 None:intergenic 30.0%
GGAAATGGTCTATATTATAG+GGG - chr7_1:6772523-6772542 None:intergenic 30.0%
CGGAAATGGTCTATATTATA+GGG - chr7_1:6772524-6772543 None:intergenic 30.0%
CCTATAATATAGACCATTTC+CGG + chr7_1:6772522-6772541 Msa1007330:intron 30.0%
CTATAATATAGACCATTTCC+GGG + chr7_1:6772523-6772542 Msa1007330:intron 30.0%
TACAAAATCAATGATATGGC+AGG + chr7_1:6772577-6772596 Msa1007330:intron 30.0%
ACAAAATCAATGATATGGCA+GGG + chr7_1:6772578-6772597 Msa1007330:intron 30.0%
! AATTTGCTCAAATTACAAGG+GGG + chr7_1:6772642-6772661 Msa1007330:intron 30.0%
CACATAATTTAAGCCTTCTT+TGG - chr7_1:6772731-6772750 None:intergenic 30.0%
CAAAGAAGGCTTAAATTATG+TGG + chr7_1:6772729-6772748 Msa1007330:intron 30.0%
GAAAGAAAAACAATTTGGAG+TGG + chr7_1:6772776-6772795 Msa1007330:intron 30.0%
! CTTTTCTCCTTACAAATGAA+GGG - chr7_1:6772832-6772851 None:intergenic 30.0%
! TCTTTTCTCCTTACAAATGA+AGG - chr7_1:6772833-6772852 None:intergenic 30.0%
AAGAAACGAGAATATATCGA+AGG - chr7_1:6772872-6772891 None:intergenic 30.0%
ATTCTCGTTTCTTACTTTGA+TGG + chr7_1:6772879-6772898 Msa1007330:intron 30.0%
TTATTCAGTGATGGCTAAAA+TGG + chr7_1:6773108-6773127 Msa1007330:intron 30.0%
TATTCAGTGATGGCTAAAAT+GGG + chr7_1:6773109-6773128 Msa1007330:intron 30.0%
!!! AATGGTATTTTTTCTGTGTG+AGG + chr7_1:6773140-6773159 Msa1007330:intron 30.0%
!!! ATGGTATTTTTTCTGTGTGA+GGG + chr7_1:6773141-6773160 Msa1007330:intron 30.0%
CAAAGACAAAGAGATTTACA+AGG + chr7_1:6773231-6773250 Msa1007330:CDS 30.0%
ACAAGGGAAATTCATTAATC+GGG + chr7_1:6773248-6773267 Msa1007330:CDS 30.0%
!!! AAAACACTGGTTTTCTACAT+AGG + chr7_1:6773277-6773296 Msa1007330:CDS 30.0%
GAAAAGGTCAAATTTGATGC+TGG + chr7_1:6772294-6772313 Msa1007330:CDS 35.0%
TTTATAAGCTCTTCATCGGT+CGG - chr7_1:6772333-6772352 None:intergenic 35.0%
CCGGAAATGGTCTATATTAT+AGG - chr7_1:6772525-6772544 None:intergenic 35.0%
CAAAATCAATGATATGGCAG+GGG + chr7_1:6772579-6772598 Msa1007330:intron 35.0%
AAAATCAATGATATGGCAGG+GGG + chr7_1:6772580-6772599 Msa1007330:intron 35.0%
CTGGTACTTTGAGCAAATTT+CGG - chr7_1:6772610-6772629 None:intergenic 35.0%
! GAAATTTGCTCAAAGTACCA+GGG + chr7_1:6772609-6772628 Msa1007330:intron 35.0%
! AAATTTGCTCAAAGTACCAG+GGG + chr7_1:6772610-6772629 Msa1007330:intron 35.0%
! ACAATTTGGAGTGGTGATTT+CGG + chr7_1:6772785-6772804 Msa1007330:intron 35.0%
TTACAAATGAAGGGTGGTTT+AGG - chr7_1:6772823-6772842 None:intergenic 35.0%
TAAACCACCCTTCATTTGTA+AGG + chr7_1:6772822-6772841 Msa1007330:intron 35.0%
TTTGTAAGGAGAAAAGAGAG+TGG + chr7_1:6772836-6772855 Msa1007330:intron 35.0%
AACACATTATGATGTGTCAG+TGG - chr7_1:6772933-6772952 None:intergenic 35.0%
CTGACACATCATAATGTGTT+AGG + chr7_1:6772933-6772952 Msa1007330:intron 35.0%
AATCGGGATGAAAAAAACAC+TGG + chr7_1:6773264-6773283 Msa1007330:CDS 35.0%
AAGAGGTGAAAAATCCAACT+GGG + chr7_1:6773309-6773328 Msa1007330:CDS 35.0%
GAAAAGGTCAAATTTGATGC+TGG + chr7_1:6772294-6772313 Msa1007330:CDS 35.0%
TTTATAAGCTCTTCATCGGT+CGG - chr7_1:6772333-6772352 None:intergenic 35.0%
CCGGAAATGGTCTATATTAT+AGG - chr7_1:6772525-6772544 None:intergenic 35.0%
CAAAATCAATGATATGGCAG+GGG + chr7_1:6772579-6772598 Msa1007330:intron 35.0%
AAAATCAATGATATGGCAGG+GGG + chr7_1:6772580-6772599 Msa1007330:intron 35.0%
CTGGTACTTTGAGCAAATTT+CGG - chr7_1:6772610-6772629 None:intergenic 35.0%
! GAAATTTGCTCAAAGTACCA+GGG + chr7_1:6772609-6772628 Msa1007330:intron 35.0%
! AAATTTGCTCAAAGTACCAG+GGG + chr7_1:6772610-6772629 Msa1007330:intron 35.0%
! ACAATTTGGAGTGGTGATTT+CGG + chr7_1:6772785-6772804 Msa1007330:intron 35.0%
TTACAAATGAAGGGTGGTTT+AGG - chr7_1:6772823-6772842 None:intergenic 35.0%
TAAACCACCCTTCATTTGTA+AGG + chr7_1:6772822-6772841 Msa1007330:intron 35.0%
TTTGTAAGGAGAAAAGAGAG+TGG + chr7_1:6772836-6772855 Msa1007330:intron 35.0%
AACACATTATGATGTGTCAG+TGG - chr7_1:6772933-6772952 None:intergenic 35.0%
CTGACACATCATAATGTGTT+AGG + chr7_1:6772933-6772952 Msa1007330:intron 35.0%
AATCGGGATGAAAAAAACAC+TGG + chr7_1:6773264-6773283 Msa1007330:CDS 35.0%
AAGAGGTGAAAAATCCAACT+GGG + chr7_1:6773309-6773328 Msa1007330:CDS 35.0%
TGTCATCAACCTTCTTGACA+AGG - chr7_1:6772362-6772381 None:intergenic 40.0%
TTTGAACCATGGGATTTACC+AGG + chr7_1:6772426-6772445 Msa1007330:intron 40.0%
AATTCACCTGGTAAATCCCA+TGG - chr7_1:6772435-6772454 None:intergenic 40.0%
!!! GGTATTTTGAAACCCGGAAA+TGG - chr7_1:6772538-6772557 None:intergenic 40.0%
TTGTACAGTCAGATGACCTA+GGG - chr7_1:6772562-6772581 None:intergenic 40.0%
TTTGTACAGTCAGATGACCT+AGG - chr7_1:6772563-6772582 None:intergenic 40.0%
! CGAAATTTGCTCAAAGTACC+AGG + chr7_1:6772608-6772627 Msa1007330:intron 40.0%
! AATTTGCTCAAAGTACCAGG+GGG + chr7_1:6772611-6772630 Msa1007330:intron 40.0%
! CAATTTGGAGTGGTGATTTC+GGG + chr7_1:6772786-6772805 Msa1007330:intron 40.0%
TTCTCCTTACAAATGAAGGG+TGG - chr7_1:6772829-6772848 None:intergenic 40.0%
CACGTCTATTAGTGTCATGT+TGG - chr7_1:6772967-6772986 None:intergenic 40.0%
CAACATGACACTAATAGACG+TGG + chr7_1:6772965-6772984 Msa1007330:intron 40.0%
GATGGCTAAAATGGGAGAAA+CGG + chr7_1:6773117-6773136 Msa1007330:intron 40.0%
CTAAAATGGGAGAAACGGAA+TGG + chr7_1:6773122-6773141 Msa1007330:intron 40.0%
GAAAATACCCAACTGGTCAA+AGG + chr7_1:6773167-6773186 Msa1007330:intron 40.0%
TATTGGTCCTTTGACCAGTT+GGG - chr7_1:6773177-6773196 None:intergenic 40.0%
ACCAATAGAGCTACTAATGC+TGG + chr7_1:6773190-6773209 Msa1007330:CDS 40.0%
! CAGTTGGATTTTTCACCTCT+TGG - chr7_1:6773310-6773329 None:intergenic 40.0%
CAAGAGGTGAAAAATCCAAC+TGG + chr7_1:6773308-6773327 Msa1007330:CDS 40.0%
! ATGCATGAATACCGATTGGA+GGG + chr7_1:6773334-6773353 Msa1007330:CDS 40.0%
TGTCATCAACCTTCTTGACA+AGG - chr7_1:6772362-6772381 None:intergenic 40.0%
TTTGAACCATGGGATTTACC+AGG + chr7_1:6772426-6772445 Msa1007330:intron 40.0%
AATTCACCTGGTAAATCCCA+TGG - chr7_1:6772435-6772454 None:intergenic 40.0%
!!! GGTATTTTGAAACCCGGAAA+TGG - chr7_1:6772538-6772557 None:intergenic 40.0%
TTGTACAGTCAGATGACCTA+GGG - chr7_1:6772562-6772581 None:intergenic 40.0%
TTTGTACAGTCAGATGACCT+AGG - chr7_1:6772563-6772582 None:intergenic 40.0%
! CGAAATTTGCTCAAAGTACC+AGG + chr7_1:6772608-6772627 Msa1007330:intron 40.0%
! AATTTGCTCAAAGTACCAGG+GGG + chr7_1:6772611-6772630 Msa1007330:intron 40.0%
! CAATTTGGAGTGGTGATTTC+GGG + chr7_1:6772786-6772805 Msa1007330:intron 40.0%
TTCTCCTTACAAATGAAGGG+TGG - chr7_1:6772829-6772848 None:intergenic 40.0%
CACGTCTATTAGTGTCATGT+TGG - chr7_1:6772967-6772986 None:intergenic 40.0%
CAACATGACACTAATAGACG+TGG + chr7_1:6772965-6772984 Msa1007330:intron 40.0%
GATGGCTAAAATGGGAGAAA+CGG + chr7_1:6773117-6773136 Msa1007330:intron 40.0%
CTAAAATGGGAGAAACGGAA+TGG + chr7_1:6773122-6773141 Msa1007330:intron 40.0%
GAAAATACCCAACTGGTCAA+AGG + chr7_1:6773167-6773186 Msa1007330:intron 40.0%
TATTGGTCCTTTGACCAGTT+GGG - chr7_1:6773177-6773196 None:intergenic 40.0%
ACCAATAGAGCTACTAATGC+TGG + chr7_1:6773190-6773209 Msa1007330:CDS 40.0%
! CAGTTGGATTTTTCACCTCT+TGG - chr7_1:6773310-6773329 None:intergenic 40.0%
CAAGAGGTGAAAAATCCAAC+TGG + chr7_1:6773308-6773327 Msa1007330:CDS 40.0%
! ATGCATGAATACCGATTGGA+GGG + chr7_1:6773334-6773353 Msa1007330:CDS 40.0%
!!! TAGGGGGGTATTTTGAAACC+CGG - chr7_1:6772544-6772563 None:intergenic 45.0%
TGTACAGTCAGATGACCTAG+GGG - chr7_1:6772561-6772580 None:intergenic 45.0%
!!! GCAAATTTTGGTTTACCCCC+TGG - chr7_1:6772629-6772648 None:intergenic 45.0%
AGGGACAGAAAATACCCAAC+TGG + chr7_1:6773160-6773179 Msa1007330:intron 45.0%
CTATTGGTCCTTTGACCAGT+TGG - chr7_1:6773178-6773197 None:intergenic 45.0%
! GCCAGCATTAGTAGCTCTAT+TGG - chr7_1:6773194-6773213 None:intergenic 45.0%
! GAGCTACTAATGCTGGCTAT+TGG + chr7_1:6773197-6773216 Msa1007330:CDS 45.0%
TACATAGGAAGAGCTCCAAG+AGG + chr7_1:6773292-6773311 Msa1007330:CDS 45.0%
GTATTCATGCATGACCCAGT+TGG - chr7_1:6773326-6773345 None:intergenic 45.0%
GGTCATGCATGAATACCGAT+TGG + chr7_1:6773330-6773349 Msa1007330:CDS 45.0%
! CATGCATGAATACCGATTGG+AGG + chr7_1:6773333-6773352 Msa1007330:CDS 45.0%
AGAGTGAGTTACCCTCCAAT+CGG - chr7_1:6773348-6773367 None:intergenic 45.0%
ATCGGTTGTGCTCAGGAAAA+AGG - chr7_1:6773381-6773400 None:intergenic 45.0%
!!! TAGGGGGGTATTTTGAAACC+CGG - chr7_1:6772544-6772563 None:intergenic 45.0%
TGTACAGTCAGATGACCTAG+GGG - chr7_1:6772561-6772580 None:intergenic 45.0%
!!! GCAAATTTTGGTTTACCCCC+TGG - chr7_1:6772629-6772648 None:intergenic 45.0%
AGGGACAGAAAATACCCAAC+TGG + chr7_1:6773160-6773179 Msa1007330:intron 45.0%
CTATTGGTCCTTTGACCAGT+TGG - chr7_1:6773178-6773197 None:intergenic 45.0%
! GCCAGCATTAGTAGCTCTAT+TGG - chr7_1:6773194-6773213 None:intergenic 45.0%
! GAGCTACTAATGCTGGCTAT+TGG + chr7_1:6773197-6773216 Msa1007330:CDS 45.0%
TACATAGGAAGAGCTCCAAG+AGG + chr7_1:6773292-6773311 Msa1007330:CDS 45.0%
GTATTCATGCATGACCCAGT+TGG - chr7_1:6773326-6773345 None:intergenic 45.0%
GGTCATGCATGAATACCGAT+TGG + chr7_1:6773330-6773349 Msa1007330:CDS 45.0%
! CATGCATGAATACCGATTGG+AGG + chr7_1:6773333-6773352 Msa1007330:CDS 45.0%
AGAGTGAGTTACCCTCCAAT+CGG - chr7_1:6773348-6773367 None:intergenic 45.0%
ATCGGTTGTGCTCAGGAAAA+AGG - chr7_1:6773381-6773400 None:intergenic 45.0%
!!! TTGTTTTTATATAATATTAT+AGG + chr7_1:6772481-6772500 Msa1007330:intron 5.0%
!!! TTGTTTTTATATAATATTAT+AGG + chr7_1:6772481-6772500 Msa1007330:intron 5.0%
GGGTTTCAAAATACCCCCCT+AGG + chr7_1:6772543-6772562 Msa1007330:intron 50.0%
TACAGTCAGATGACCTAGGG+GGG - chr7_1:6772559-6772578 None:intergenic 50.0%
GTACAGTCAGATGACCTAGG+GGG - chr7_1:6772560-6772579 None:intergenic 50.0%
GGGGGTAAACTGAACCAAAG+AGG + chr7_1:6772660-6772679 Msa1007330:intron 50.0%
ACGTTGTTCGTCGTCCTCTT+TGG - chr7_1:6772677-6772696 None:intergenic 50.0%
GCTGGCTATTGGAAAGCAAC+AGG + chr7_1:6773208-6773227 Msa1007330:CDS 50.0%
GGGTTTCAAAATACCCCCCT+AGG + chr7_1:6772543-6772562 Msa1007330:intron 50.0%
TACAGTCAGATGACCTAGGG+GGG - chr7_1:6772559-6772578 None:intergenic 50.0%
GTACAGTCAGATGACCTAGG+GGG - chr7_1:6772560-6772579 None:intergenic 50.0%
GGGGGTAAACTGAACCAAAG+AGG + chr7_1:6772660-6772679 Msa1007330:intron 50.0%
ACGTTGTTCGTCGTCCTCTT+TGG - chr7_1:6772677-6772696 None:intergenic 50.0%
GCTGGCTATTGGAAAGCAAC+AGG + chr7_1:6773208-6773227 Msa1007330:CDS 50.0%
TGTGTGGATCGGTTGTGCTC+AGG - chr7_1:6773388-6773407 None:intergenic 55.0%
GAGCACAACCGATCCACACA+TGG + chr7_1:6773388-6773407 Msa1007330:CDS 55.0%
TGTGTGGATCGGTTGTGCTC+AGG - chr7_1:6773388-6773407 None:intergenic 55.0%
GAGCACAACCGATCCACACA+TGG + chr7_1:6773388-6773407 Msa1007330:CDS 55.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 6772285 6773414 6772285 ID=Msa1007330;Name=Msa1007330
chr7_1 mRNA 6772285 6773414 6772285 ID=Msa1007330-mRNA-1;Parent=Msa1007330;Name=Msa1007330-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|0|0|2|0|129
chr7_1 exon 6772285 6772424 6772285 ID=Msa1007330-mRNA-1:exon:2012;Parent=Msa1007330-mRNA-1
chr7_1 exon 6773168 6773414 6773168 ID=Msa1007330-mRNA-1:exon:2013;Parent=Msa1007330-mRNA-1
chr7_1 CDS 6772285 6772424 6772285 ID=Msa1007330-mRNA-1:cds;Parent=Msa1007330-mRNA-1
chr7_1 CDS 6773168 6773414 6773168 ID=Msa1007330-mRNA-1:cds;Parent=Msa1007330-mRNA-1
Gene Sequence

>Msa1007330

ATGGAAAATGAAAAGGTCAAATTTGATGCTGGTTTTCGATTCTTTCCGACCGATGAAGAGCTTATAAATCAATACCTTGTCAAGAAGGTTGATGACAATAGCTTCTGTGCTATAGCTATTGCTGAAGTTGATATGAATAAAAAATACCCAACTGGTCAAAGGACCAATAGAGCTACTAATGCTGGCTATTGGAAAGCAACAGGCAAAGACAAAGAGATTTACAAGGGAAATTCATTAATCGGGATGAAAAAAACACTGGTTTTCTACATAGGAAGAGCTCCAAGAGGTGAAAAATCCAACTGGGTCATGCATGAATACCGATTGGAGGGTAACTCACTCTCTAAGCACAACCTTTTTCCTGAGCACAACCGATCCACACATGGAATG
Protein sequence

>Msa1007330

MENEKVKFDAGFRFFPTDEELINQYLVKKVDDNSFCAIAIAEVDMNKKYPTGQRTNRATNAGYWKATGKDKEIYKGNSLIGMKKTLVFYIGRAPRGEKSNWVMHEYRLEGNSLSKHNLFPEHNRSTHGM