AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1007460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1007460 MtrunA17_Chr5g0441581 55.338 665 279 3 46 700 30 686 0.0 761
Msa1007460 MtrunA17_Chr2g0296781 45.643 677 344 8 52 721 1 660 0.0 602
Msa1007460 MtrunA17_Chr6g0477261 47.340 564 275 6 164 721 2 549 0.0 533
Msa1007460 MtrunA17_Chr1g0196541 42.167 683 372 8 52 731 1 663 2.72e-177 526
Msa1007460 MtrunA17_Chr5g0448761 34.688 640 386 12 48 667 60 687 8.77e-126 395
Msa1007460 MtrunA17_Chr1g0202341 36.020 608 353 11 48 647 51 630 1.51e-120 378
Msa1007460 MtrunA17_Chr1g0207551 35.859 594 363 8 46 633 32 613 8.75e-116 369
Msa1007460 MtrunA17_Chr2g0291581 34.568 567 351 7 47 607 70 622 1.27e-115 365
Msa1007460 MtrunA17_Chr2g0329031 34.110 601 352 13 48 633 14 585 1.16e-112 359
Msa1007460 MtrunA17_Chr3g0080351 31.974 613 363 11 48 640 76 654 2.44e-104 340
Msa1007460 MtrunA17_Chr5g0448511 39.541 392 231 3 216 606 11 397 1.60e-98 316
Msa1007460 MtrunA17_Chr2g0291591 33.969 524 339 5 19 539 37 556 8.30e-94 304
Msa1007460 MtrunA17_Chr2g0324011 31.810 569 368 7 48 606 10 568 1.19e-93 304
Msa1007460 MtrunA17_Chr5g0440451 32.114 629 364 14 48 643 43 641 9.25e-93 311
Msa1007460 MtrunA17_Chr3g0118611 36.902 439 259 7 212 645 115 540 4.85e-89 297
Msa1007460 MtrunA17_Chr2g0287061 33.511 564 331 13 45 606 180 701 5.33e-89 298
Msa1007460 MtrunA17_Chr2g0287651 28.244 655 442 11 17 662 53 688 5.64e-81 277
Msa1007460 MtrunA17_Chr1g0198761 28.322 745 467 18 9 724 10 716 6.95e-79 269
Msa1007460 MtrunA17_Chr8g0363841 29.948 581 374 15 50 612 19 584 1.25e-77 264
Msa1007460 MtrunA17_Chr1g0203721 27.360 625 431 11 36 645 48 664 2.58e-76 265
Msa1007460 MtrunA17_Chr6g0458391 28.269 566 376 9 47 606 224 765 4.65e-73 253
Msa1007460 MtrunA17_Chr3g0082121 29.751 642 403 19 46 666 41 655 6.54e-73 251
Msa1007460 MtrunA17_Chr2g0276841 28.120 601 382 16 31 603 48 626 5.24e-67 235
Msa1007460 MtrunA17_Chr1g0203051 27.593 540 370 9 63 593 94 621 8.26e-66 231
Msa1007460 MtrunA17_Chr2g0290391 27.632 608 384 13 28 603 27 610 4.63e-64 227
Msa1007460 MtrunA17_Chr5g0431001 32.401 429 268 9 44 453 57 482 1.96e-61 215
Msa1007460 MtrunA17_Chr2g0294841 26.316 646 428 19 19 635 10 636 4.51e-59 214
Msa1007460 MtrunA17_Chr1g0164591 33.648 318 194 8 123 435 3 308 4.21e-50 179
Msa1007460 MtrunA17_Chr7g0258861 33.916 286 180 6 48 325 10 294 1.11e-43 160
Msa1007460 MtrunA17_Chr6g0451441 43.011 186 103 2 45 229 84 267 1.36e-42 161
Msa1007460 MtrunA17_Chr1g0172041 43.434 99 56 0 533 631 15 113 1.74e-25 101
Msa1007460 MtrunA17_Chr2g0308841 26.872 227 158 4 379 603 4 224 1.96e-23 100
Msa1007460 MtrunA17_Chr6g0476441 33.136 169 101 4 554 721 8 165 9.48e-19 87.8
Msa1007460 MtrunA17_Chr3g0081281 41.975 81 46 1 193 273 14 93 1.04e-13 67.4
Msa1007460 MtrunA17_Chr1g0149131 29.091 110 77 1 322 430 1 110 6.98e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1007460 AT4G15090.1 32.104 732 460 14 48 771 51 753 2.99e-122 387
Msa1007460 AT4G15090.5 32.104 732 460 14 48 771 51 753 2.99e-122 387
Msa1007460 AT4G15090.3 32.104 732 460 14 48 771 51 753 2.99e-122 387
Msa1007460 AT4G15090.2 32.104 732 460 14 48 771 51 753 2.99e-122 387
Msa1007460 AT4G15090.4 32.104 732 460 14 48 771 51 753 2.99e-122 387
Msa1007460 AT4G38180.1 31.967 732 445 17 8 705 38 750 4.79e-117 372
Msa1007460 AT3G22170.2 29.653 779 472 15 18 770 35 763 7.80e-112 360
Msa1007460 AT3G22170.1 29.653 779 472 15 18 770 35 763 7.80e-112 360
Msa1007460 AT1G52520.1 32.538 587 371 12 33 607 66 639 3.73e-105 338
Msa1007460 AT1G76320.3 31.857 587 376 9 52 633 1 568 1.36e-104 336
Msa1007460 AT1G76320.2 31.857 587 376 9 52 633 1 568 4.60e-104 336
Msa1007460 AT1G76320.1 31.857 587 376 9 52 633 1 568 5.48e-104 336
Msa1007460 AT1G76320.4 31.857 587 376 9 52 633 1 568 5.48e-104 336
Msa1007460 AT3G06250.2 33.393 563 323 14 48 606 190 704 9.83e-92 304
Msa1007460 AT3G06250.1 33.393 563 323 14 48 606 190 704 9.83e-92 304
Msa1007460 AT3G06250.3 33.393 563 323 14 48 606 190 704 9.83e-92 304
Msa1007460 AT2G27110.2 31.639 610 364 14 48 645 49 617 1.06e-91 306
Msa1007460 AT2G27110.1 31.639 610 364 14 48 645 49 617 1.06e-91 306
Msa1007460 AT1G80010.1 32.269 595 369 12 39 610 82 665 2.51e-89 297
Msa1007460 AT2G27110.3 34.519 478 290 9 172 645 14 472 1.71e-86 289
Msa1007460 AT5G18960.2 32.060 602 354 16 28 622 192 745 2.17e-85 288
Msa1007460 AT5G18960.1 32.060 602 354 16 28 622 192 745 2.17e-85 288
Msa1007460 AT2G32250.8 33.634 443 273 6 224 658 135 564 1.02e-79 272
Msa1007460 AT2G32250.7 33.634 443 273 6 224 658 135 564 1.08e-79 272
Msa1007460 AT2G32250.5 33.634 443 273 6 224 658 176 605 1.22e-79 271
Msa1007460 AT2G32250.6 33.634 443 273 6 224 658 176 605 1.97e-79 272
Msa1007460 AT2G32250.1 33.634 443 273 6 224 658 176 605 1.97e-79 272
Msa1007460 AT2G32250.3 33.634 443 273 6 224 658 176 605 1.97e-79 272
Msa1007460 AT2G32250.2 33.634 443 273 6 224 658 176 605 2.06e-79 272
Msa1007460 AT2G32250.4 33.634 443 273 6 224 658 176 605 2.06e-79 272
Msa1007460 AT4G19990.3 29.868 606 355 12 51 632 24 583 4.74e-78 267
Msa1007460 AT4G19990.4 29.868 606 355 12 51 632 24 583 4.74e-78 267
Msa1007460 AT4G19990.5 29.868 606 355 12 51 632 24 583 6.63e-78 267
Msa1007460 AT4G19990.7 29.868 606 355 12 51 632 38 597 1.04e-77 266
Msa1007460 AT4G19990.6 29.868 606 355 12 51 632 24 583 1.37e-77 266
Msa1007460 AT4G19990.2 29.868 606 355 12 51 632 24 583 1.37e-77 266
Msa1007460 AT4G38170.1 33.763 388 246 4 221 606 21 399 3.80e-75 254
Msa1007460 AT4G19990.1 30.612 539 320 10 104 632 32 526 8.21e-74 254
Msa1007460 AT1G10240.2 26.274 628 414 18 1 603 1 604 4.16e-62 221
Msa1007460 AT1G10240.1 26.274 628 414 18 1 603 1 604 4.16e-62 221
Msa1007460 AT5G28530.1 27.778 594 365 13 46 603 53 618 4.80e-62 221
Msa1007460 AT5G28530.3 27.273 594 364 12 46 603 53 614 3.10e-61 219
Msa1007460 AT5G28530.2 27.273 594 364 12 46 603 53 614 3.10e-61 219
Msa1007460 AT5G28530.4 26.524 328 203 7 290 603 252 555 2.70e-27 118
Msa1007460 AT5G28530.4 28.324 173 107 5 46 205 53 221 3.90e-11 67.0
Msa1007460 AT5G28530.5 25.610 328 202 6 290 603 252 551 1.31e-26 116
Msa1007460 AT5G28530.5 28.324 173 107 5 46 205 53 221 3.88e-11 67.0

Find 151 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTGTTGACGTTTCGGATTC+CGG 0.201943 7_1:-7005407 Msa1007460:CDS
TCTTTCCCGCTCTTCGAAAA+TGG 0.249066 7_1:+7004245 None:intergenic
GATCGCAAACCCTTGTTTCA+TGG 0.299904 7_1:+7005280 None:intergenic
AAGACCGCAACCTAGTAAAA+TGG 0.321194 7_1:+7004599 None:intergenic
AGTATTGTGTTGATTTCAAC+AGG 0.322134 7_1:-7003831 Msa1007460:CDS
TTGCTTTAAAGAAGGGTATA+TGG 0.327623 7_1:-7005109 Msa1007460:CDS
GTGTTGACGTTTCGGATTCC+GGG 0.344560 7_1:-7005406 Msa1007460:CDS
GGCTATGCAGAATGCAATTC+AGG 0.347065 7_1:-7004475 Msa1007460:CDS
ACTAAATCACGGTTGTTTGC+TGG 0.375082 7_1:-7005041 Msa1007460:CDS
TGCTGCTCGTGTTGACGTTT+CGG 0.391419 7_1:-7005414 Msa1007460:CDS
CACCACCTATGCCTAGTATT+AGG 0.393202 7_1:+7004444 None:intergenic
GTACACCCATGACAAGTATA+TGG 0.398379 7_1:-7003977 Msa1007460:CDS
GGATTAAGAATTGGTTGATC+AGG 0.405554 7_1:+7003409 None:intergenic
CTAGGCATAGGTGGTGTCTA+TGG 0.405638 7_1:-7004437 Msa1007460:CDS
ACTTCCACAACCGAAACAAT+TGG 0.413255 7_1:+7003289 None:intergenic
ATGCCATTTGCCACGTTTGT+TGG 0.415317 7_1:-7004642 Msa1007460:CDS
AAAGGATGATCGATCAATAT+AGG 0.415391 7_1:+7005467 None:intergenic
ACATTACTTCCTATGTCTGA+TGG 0.423977 7_1:-7003157 Msa1007460:CDS
CCTCTGTGTTGTTGACATTC+CGG 0.424793 7_1:+7004188 None:intergenic
AAAACCAATTGTTTCGGTTG+TGG 0.428388 7_1:-7003293 Msa1007460:CDS
TTGGTGGTATGTTTGATTCA+TGG 0.433399 7_1:+7005183 None:intergenic
GCAAACAACCGTGATTTAGT+TGG 0.439208 7_1:+7005044 None:intergenic
ATGGTTTGGGTGAAAATGAT+TGG 0.445440 7_1:-7004275 Msa1007460:CDS
CATTACTTCCTATGTCTGAT+GGG 0.447968 7_1:-7003156 Msa1007460:CDS
ACACAATACTTAGTTTCGTT+CGG 0.457073 7_1:+7003844 None:intergenic
GGCTAAGGTGTATGTCTTCG+AGG 0.457503 7_1:-7004530 Msa1007460:CDS
TATCCTACTTTGCTAGAATG+AGG 0.459924 7_1:-7004818 Msa1007460:CDS
AAAACTAGAAACTCTAAGAA+AGG 0.460549 7_1:-7005257 Msa1007460:CDS
ACTCCAAGACAAGGCTGAAA+AGG 0.462412 7_1:-7004082 Msa1007460:CDS
CAAATGGTCTAGCAAGAAGT+TGG 0.463702 7_1:-7003512 Msa1007460:CDS
GTCATACTTGTTTGTCAAGT+AGG 0.465266 7_1:+7004665 None:intergenic
AGGTTGTGTTTCCTAATACT+AGG 0.465284 7_1:-7004455 Msa1007460:CDS
CCATCAGCTAGCTCTCCGTC+AGG 0.466136 7_1:+7005437 None:intergenic
GCAAAAGAAAGACACCTTCT+CGG 0.472868 7_1:-7004867 Msa1007460:CDS
GATAACGGTTGCTTTAAAGA+AGG 0.473052 7_1:-7005117 Msa1007460:CDS
AACATCACCAAAGTATTCAT+AGG 0.473828 7_1:+7004704 None:intergenic
ACACCAACAAACGTGGCAAA+TGG 0.474667 7_1:+7004639 None:intergenic
CCACACATAGAAAGATTTGA+AGG 0.478166 7_1:-7003616 Msa1007460:CDS
GCCACATTGTGGTGTGGGAG+GGG 0.479684 7_1:-7003473 Msa1007460:CDS
GAGCAATCAAGTTTCTTCGT+TGG 0.480101 7_1:+7005146 None:intergenic
CACTTATGCTCGATGGCTGA+TGG 0.482201 7_1:-7005494 None:intergenic
TCGGGAAGGAAGGAGATGGC+AGG 0.482875 7_1:-7004848 Msa1007460:CDS
ATTTGTTGTTTCAAAGGTCC+CGG 0.485747 7_1:+7005388 None:intergenic
TTGAAATTGTCTCTCGATTG+TGG 0.489013 7_1:+7004005 None:intergenic
GACAGCATTTGTTGTTTCAA+AGG 0.491833 7_1:+7005382 None:intergenic
CTTGTTTCATGGCATATTCA+CGG 0.492232 7_1:+7005291 None:intergenic
AAAACCACTAGTTGACTGTT+GGG 0.492621 7_1:+7003096 None:intergenic
TCCGTTAAAAGTACCACGTA+AGG 0.492742 7_1:-7003389 Msa1007460:CDS
GACAATACTCTCCTCTAAAA+CGG 0.498094 7_1:+7003876 None:intergenic
CGTGAATATGCCATGAAACA+AGG 0.498225 7_1:-7005290 Msa1007460:CDS
TGTATGAAGAAATGATCAAA+TGG 0.501577 7_1:-7003528 Msa1007460:CDS
TTAAAAGACATACCGATAGT+AGG 0.501742 7_1:+7005341 None:intergenic
TTTCGAAGAGCGGGAAAGAT+GGG 0.502201 7_1:-7004241 Msa1007460:CDS
GTTGGATTCGTCTTCAAAGT+TGG 0.502236 7_1:+7005164 None:intergenic
ATACTTGTCATGGGTGTACT+CGG 0.502362 7_1:+7003981 None:intergenic
CATCTCCTTCCTTCCCGAGA+AGG 0.502837 7_1:+7004853 None:intergenic
TTACCTGGTTGTTCGAAACA+TGG 0.503284 7_1:-7004551 Msa1007460:CDS
TGGTCATCTTAGAGTGAAAG+AGG 0.503540 7_1:-7003731 Msa1007460:CDS
TATGTCTTCGAGGCCTCCAA+TGG 0.508338 7_1:-7004520 Msa1007460:CDS
TCGGTTACAATTCCCATTGG+AGG 0.511504 7_1:+7004507 None:intergenic
TTACGAAAATCTAACATTTG+TGG 0.512305 7_1:-7004913 Msa1007460:CDS
AAACGATCAGGCAGGTGTAC+GGG 0.512319 7_1:-7004976 Msa1007460:CDS
CGTTCCATGGTATGTGATGC+CGG 0.512631 7_1:-7004939 Msa1007460:CDS
GAGAGATGTCAGAAACTTTG+TGG 0.514693 7_1:-7004889 Msa1007460:CDS
TCTGGGCTGATGCACGTAGT+AGG 0.516810 7_1:-7004731 Msa1007460:CDS
CAAAAGAAAGACACCTTCTC+GGG 0.517286 7_1:-7004866 Msa1007460:CDS
GTATCTCCATATACTTGTCA+TGG 0.517305 7_1:+7003971 None:intergenic
CCTTCAAATCTTTCTATGTG+TGG 0.521556 7_1:+7003616 None:intergenic
AAACTAGAAACTCTAAGAAA+GGG 0.523644 7_1:-7005256 Msa1007460:CDS
TTCCCTCATTCTAGCAAAGT+AGG 0.524536 7_1:+7004815 None:intergenic
AAATGGTCTAGCAAGAAGTT+GGG 0.529100 7_1:-7003511 Msa1007460:CDS
GAACAAAAGTTTCCGTTCCA+TGG 0.529264 7_1:-7004952 Msa1007460:CDS
GGATTCGTCTTCAAAGTTGG+TGG 0.530111 7_1:+7005167 None:intergenic
TAAACGATCAGGCAGGTGTA+CGG 0.533293 7_1:-7004977 Msa1007460:CDS
ATAACGGTTGCTTTAAAGAA+GGG 0.535542 7_1:-7005116 Msa1007460:CDS
TAAAACCACTAGTTGACTGT+TGG 0.536849 7_1:+7003095 None:intergenic
ATCCTACTTTGCTAGAATGA+GGG 0.537508 7_1:-7004817 Msa1007460:CDS
TGATCGGTTACAATTCCCAT+TGG 0.541217 7_1:+7004504 None:intergenic
CATCAGCTAGCTCTCCGTCA+GGG 0.541329 7_1:+7005438 None:intergenic
CTGCATAGCCTTGCACTGAT+CGG 0.542185 7_1:+7004488 None:intergenic
CTATGAGATTGACATGGACG+AGG 0.547341 7_1:-7004775 Msa1007460:CDS
TGATTGCTCAGCTAAGATAA+CGG 0.550952 7_1:-7005132 Msa1007460:CDS
GATAAATTCACGCCTACTAT+CGG 0.551302 7_1:-7005353 Msa1007460:CDS
TGTTTGCTGTTTGAGTTCAG+AGG 0.551367 7_1:-7003784 Msa1007460:CDS
TATCTCCATATACTTGTCAT+GGG 0.551454 7_1:+7003972 None:intergenic
ATTCTAACTTGTGCAAGAGA+AGG 0.552020 7_1:-7005209 Msa1007460:CDS
AGGTCTGCCTATGAATACTT+TGG 0.552277 7_1:-7004711 Msa1007460:CDS
AGACACCTTCTCGGGAAGGA+AGG 0.553011 7_1:-7004858 Msa1007460:CDS
CTAAATTTATCTTGCCACAA+TGG 0.553022 7_1:-7003702 Msa1007460:CDS
CAGCCACATTGTGGTGTGGG+AGG 0.557227 7_1:-7003475 Msa1007460:CDS
TTACAGCCACATTGTGGTGT+GGG 0.557892 7_1:-7003478 Msa1007460:CDS
TGTTTCGAACAACCAGGTAA+AGG 0.558836 7_1:+7004554 None:intergenic
AGCCACATTGTGGTGTGGGA+GGG 0.562336 7_1:-7003474 Msa1007460:CDS
GAGATACAAGTAGAATTTCG+TGG 0.566723 7_1:-7003955 Msa1007460:CDS
GAACAACCAGGTAAAGGACT+TGG 0.570795 7_1:+7004560 None:intergenic
ATGTCTTCGAGGCCTCCAAT+GGG 0.571048 7_1:-7004519 Msa1007460:CDS
TTTACAGCCACATTGTGGTG+TGG 0.571102 7_1:-7003479 Msa1007460:CDS
TGTTTCCTAATACTAGGCAT+AGG 0.571109 7_1:-7004449 Msa1007460:CDS
TTGTTGGTGTCAATCATCAC+GGG 0.575229 7_1:-7004626 Msa1007460:CDS
TTTGTTGGTGTCAATCATCA+CGG 0.578664 7_1:-7004627 Msa1007460:CDS
TCTGATGGGTTTCAAGCGTA+CGG 0.579844 7_1:-7003142 Msa1007460:CDS
ATCAGCTAGCTCTCCGTCAG+GGG 0.582853 7_1:+7005439 None:intergenic
TCAGACATAGGAAGTAATGT+AGG 0.589454 7_1:+7003160 None:intergenic
TTGTGTGTATGATTCTCTGC+GGG 0.590009 7_1:-7004340 Msa1007460:CDS
AAAGGATATGCACAATACAA+AGG 0.590743 7_1:-7004384 Msa1007460:CDS
AACTCTAAGAAAGGGTCCGA+TGG 0.598447 7_1:-7005248 Msa1007460:CDS
GCTTGAAACCCATCAGACAT+AGG 0.598911 7_1:+7003148 None:intergenic
GTGAATATGCCATGAAACAA+GGG 0.602322 7_1:-7005289 Msa1007460:CDS
CGACAACGCACTCCAAGACA+AGG 0.606607 7_1:-7004091 Msa1007460:CDS
AGATACAAGTAGAATTTCGT+GGG 0.607840 7_1:-7003954 Msa1007460:CDS
AGAAAGACACCTTCTCGGGA+AGG 0.609091 7_1:-7004862 Msa1007460:CDS
GACAACCGACGATTAGTTCG+AGG 0.611005 7_1:+7003361 None:intergenic
ACCACCGGCATCACATACCA+TGG 0.613048 7_1:+7004935 None:intergenic
AAGATACCAAGTCCTTTACC+TGG 0.614091 7_1:-7004566 Msa1007460:CDS
AAATGCAACTGTTATCTCGA+AGG 0.615193 7_1:-7003931 Msa1007460:CDS
TTCCTAATACTAGGCATAGG+TGG 0.615209 7_1:-7004446 Msa1007460:CDS
TCTCGAAGGTGTGACTACAA+TGG 0.615748 7_1:-7003917 Msa1007460:CDS
CAAGCACAATCATTCCATGC+GGG 0.616971 7_1:-7004035 Msa1007460:CDS
ATACTTGTTTGTCAAGTAGG+TGG 0.617215 7_1:+7004668 None:intergenic
GGTTGTTCGAAACATGGCTA+AGG 0.617470 7_1:-7004545 Msa1007460:CDS
AATTGTAACCGATCAGTGCA+AGG 0.620761 7_1:-7004496 Msa1007460:CDS
CGGGAAGGAAGGAGATGGCA+GGG 0.622349 7_1:-7004847 Msa1007460:CDS
TCATCCCAACAGTCAACTAG+TGG 0.623204 7_1:-7003100 Msa1007460:CDS
CCTGACGGAGAGCTAGCTGA+TGG 0.623440 7_1:-7005437 Msa1007460:CDS
CCGTTAAAAGTACCACGTAA+GGG 0.624486 7_1:-7003388 Msa1007460:CDS
TGTGGCAAGATAAATTTAGA+CGG 0.625102 7_1:+7003706 None:intergenic
CGGCATCACATACCATGGAA+CGG 0.625469 7_1:+7004940 None:intergenic
ATTAGTTTACAGCCACATTG+TGG 0.625843 7_1:-7003484 Msa1007460:CDS
TAGCCATGTTTCGAACAACC+AGG 0.627145 7_1:+7004548 None:intergenic
ATTGTGGAATTTGACCCGCA+TGG 0.627292 7_1:+7004021 None:intergenic
GTTCGAGGACGTCCCTTACG+TGG 0.628497 7_1:+7003376 None:intergenic
CTTCTCGGGAAGGAAGGAGA+TGG 0.631777 7_1:-7004852 Msa1007460:CDS
TGCATCAATGAGCAAAGATG+TGG 0.632890 7_1:-7003062 Msa1007460:CDS
CAAGGCTGAAAAGGAATACG+AGG 0.638254 7_1:-7004073 Msa1007460:CDS
GGATGATCGATCAATATAGG+AGG 0.639611 7_1:+7005470 None:intergenic
AGATAAGTCCAACTAAATCA+CGG 0.645312 7_1:-7005052 Msa1007460:CDS
ATGATTGACACCAACAAACG+TGG 0.648270 7_1:+7004632 None:intergenic
TCAGCTAGCTCTCCGTCAGG+GGG 0.662037 7_1:+7005440 None:intergenic
TTATGAAATTGCAGAATGTG+CGG 0.662542 7_1:-7003578 Msa1007460:CDS
TACAAATCAGAAGTTTGACT+AGG 0.668845 7_1:+7003547 None:intergenic
TTAGAGGAGAGTATTGTCTG+TGG 0.669312 7_1:-7003871 Msa1007460:CDS
GGATCATAGCTTAAACACGA+TGG 0.674970 7_1:-7003452 Msa1007460:CDS
GACGTCCTCGAACTAATCGT+CGG 0.680634 7_1:-7003366 Msa1007460:CDS
TCATAGCTTAAACACGATGG+AGG 0.690849 7_1:-7003449 Msa1007460:CDS
TCAAGCACAATCATTCCATG+CGG 0.697666 7_1:-7004036 Msa1007460:CDS
TCCCCTCCCACACCACAATG+TGG 0.710147 7_1:+7003472 None:intergenic
ATTGTGTGTATGATTCTCTG+CGG 0.733784 7_1:-7004341 Msa1007460:CDS
GTATTGTGTTGATTTCAACA+GGG 0.762610 7_1:-7003830 Msa1007460:CDS
TCCATGGTATGTGATGCCGG+TGG 0.764195 7_1:-7004936 Msa1007460:CDS
CCGGAATGTCAACAACACAG+AGG 0.797075 7_1:-7004188 Msa1007460:CDS
AGATTGATATGCATGCACAG+CGG 0.798983 7_1:-7005010 Msa1007460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATCATTTTTTAAATAACA+TGG + chr7_1:7004314-7004333 None:intergenic 10.0%
!! TTATTTAAAAAATGATTTCT+GGG - chr7_1:7004316-7004335 Msa1007460:CDS 10.0%
!! GTTATTTAAAAAATGATTTC+TGG - chr7_1:7004315-7004334 Msa1007460:CDS 15.0%
!! AATGTAATCACAATAATAAT+AGG + chr7_1:7005277-7005296 None:intergenic 15.0%
!! ACAACATTCATTGAAAAATA+TGG - chr7_1:7004233-7004252 Msa1007460:CDS 20.0%
!! ATTCATTGAAAAATATGGTT+TGG - chr7_1:7004238-7004257 Msa1007460:CDS 20.0%
!! TTCATTGAAAAATATGGTTT+GGG - chr7_1:7004239-7004258 Msa1007460:CDS 20.0%
!! AAGAAAAAAACCAATTGTTT+CGG - chr7_1:7005228-7005247 Msa1007460:CDS 20.0%
!! AAAACTAGAAACTCTAAGAA+AGG - chr7_1:7003270-7003289 Msa1007460:intron 25.0%
!! AAACTAGAAACTCTAAGAAA+GGG - chr7_1:7003271-7003290 Msa1007460:intron 25.0%
!!! GAAATATTTTAACATGCCAT+CGG + chr7_1:7003298-7003317 None:intergenic 25.0%
! TTACGAAAATCTAACATTTG+TGG - chr7_1:7003614-7003633 Msa1007460:CDS 25.0%
! AAAATTGCCGAAAAATTGAA+AGG - chr7_1:7004125-7004144 Msa1007460:CDS 25.0%
!! TGCATATCCTTTCAATTTTT+CGG + chr7_1:7004135-7004154 None:intergenic 25.0%
! TGTATGAAGAAATGATCAAA+TGG - chr7_1:7004999-7005018 Msa1007460:CDS 25.0%
!!! ACTTTTAACGGATTAAGAAT+TGG + chr7_1:7005130-7005149 None:intergenic 25.0%
!!! TTTTTTCACAATCTTTTCAG+TGG + chr7_1:7005194-7005213 None:intergenic 25.0%
AAAGGATGATCGATCAATAT+AGG + chr7_1:7003063-7003082 None:intergenic 30.0%
TTAAAAGACATACCGATAGT+AGG + chr7_1:7003189-7003208 None:intergenic 30.0%
!! ATAACGGTTGCTTTAAAGAA+GGG - chr7_1:7003411-7003430 Msa1007460:CDS 30.0%
!! TTGCTTTAAAGAAGGGTATA+TGG - chr7_1:7003418-7003437 Msa1007460:CDS 30.0%
AGATAAGTCCAACTAAATCA+CGG - chr7_1:7003475-7003494 Msa1007460:CDS 30.0%
!! GACAATTTTGATAAACGATC+AGG - chr7_1:7003539-7003558 Msa1007460:CDS 30.0%
! CTTTTTCTATGAGATTGACA+TGG - chr7_1:7003746-7003765 Msa1007460:CDS 30.0%
! TTCATGTGCAGAATATTTTC+TGG - chr7_1:7003778-7003797 Msa1007460:CDS 30.0%
! TCATGTGCAGAATATTTTCT+GGG - chr7_1:7003779-7003798 Msa1007460:CDS 30.0%
! AACATCACCAAAGTATTCAT+AGG + chr7_1:7003826-7003845 None:intergenic 30.0%
AAAGGATATGCACAATACAA+AGG - chr7_1:7004143-7004162 Msa1007460:CDS 30.0%
! TTAAAAAATGATTTCTGGGC+CGG - chr7_1:7004320-7004339 Msa1007460:CDS 30.0%
!!! AGTATGAATGCTTTTTTCGA+TGG - chr7_1:7004368-7004387 Msa1007460:CDS 30.0%
TATCTCCATATACTTGTCAT+GGG + chr7_1:7004558-7004577 None:intergenic 30.0%
AGATACAAGTAGAATTTCGT+GGG - chr7_1:7004573-7004592 Msa1007460:CDS 30.0%
ACACAATACTTAGTTTCGTT+CGG + chr7_1:7004686-7004705 None:intergenic 30.0%
!! AGTATTGTGTTGATTTCAAC+AGG - chr7_1:7004696-7004715 Msa1007460:CDS 30.0%
!! GTATTGTGTTGATTTCAACA+GGG - chr7_1:7004697-7004716 Msa1007460:CDS 30.0%
TGTGGCAAGATAAATTTAGA+CGG + chr7_1:7004824-7004843 None:intergenic 30.0%
CTAAATTTATCTTGCCACAA+TGG - chr7_1:7004825-7004844 Msa1007460:CDS 30.0%
! TTCACATTTTTACTCCATTG+TGG + chr7_1:7004842-7004861 None:intergenic 30.0%
!!! TATGTGTGGTTGTAGTTTTT+TGG + chr7_1:7004900-7004919 None:intergenic 30.0%
TTATGAAATTGCAGAATGTG+CGG - chr7_1:7004949-7004968 Msa1007460:CDS 30.0%
TACAAATCAGAAGTTTGACT+AGG + chr7_1:7004983-7005002 None:intergenic 30.0%
!! ATTTGTTGTTTCAAAGGTCC+CGG + chr7_1:7003142-7003161 None:intergenic 35.0%
!! GACAGCATTTGTTGTTTCAA+AGG + chr7_1:7003148-7003167 None:intergenic 35.0%
GATAAATTCACGCCTACTAT+CGG - chr7_1:7003174-7003193 Msa1007460:intron 35.0%
CTTGTTTCATGGCATATTCA+CGG + chr7_1:7003239-7003258 None:intergenic 35.0%
GTGAATATGCCATGAAACAA+GGG - chr7_1:7003238-7003257 Msa1007460:intron 35.0%
! ATTCTAACTTGTGCAAGAGA+AGG - chr7_1:7003318-7003337 Msa1007460:CDS 35.0%
! TTGGTGGTATGTTTGATTCA+TGG + chr7_1:7003347-7003366 None:intergenic 35.0%
TGATTGCTCAGCTAAGATAA+CGG - chr7_1:7003395-7003414 Msa1007460:CDS 35.0%
!! GATAACGGTTGCTTTAAAGA+AGG - chr7_1:7003410-7003429 Msa1007460:CDS 35.0%
!! ATTTTGATAAACGATCAGGC+AGG - chr7_1:7003543-7003562 Msa1007460:CDS 35.0%
! TGTTAGATTTTCGTAACCAC+CGG + chr7_1:7003610-7003629 None:intergenic 35.0%
TATCCTACTTTGCTAGAATG+AGG - chr7_1:7003709-7003728 Msa1007460:CDS 35.0%
ATCCTACTTTGCTAGAATGA+GGG - chr7_1:7003710-7003729 Msa1007460:CDS 35.0%
ATACTTGTTTGTCAAGTAGG+TGG + chr7_1:7003862-7003881 None:intergenic 35.0%
GTCATACTTGTTTGTCAAGT+AGG + chr7_1:7003865-7003884 None:intergenic 35.0%
!! TTTGTTGGTGTCAATCATCA+CGG - chr7_1:7003900-7003919 Msa1007460:CDS 35.0%
! CAATCCATTTTACTAGGTTG+CGG - chr7_1:7003924-7003943 Msa1007460:CDS 35.0%
AGGTTGTGTTTCCTAATACT+AGG - chr7_1:7004072-7004091 Msa1007460:CDS 35.0%
TGTTTCCTAATACTAGGCAT+AGG - chr7_1:7004078-7004097 Msa1007460:CDS 35.0%
ATTGTGTGTATGATTCTCTG+CGG - chr7_1:7004186-7004205 Msa1007460:CDS 35.0%
!!! GGGTTGATGATTTTGTTGTT+GGG - chr7_1:7004207-7004226 Msa1007460:CDS 35.0%
!!! TTGATGATTTTGTTGTTGGG+TGG - chr7_1:7004210-7004229 Msa1007460:CDS 35.0%
! ATGGTTTGGGTGAAAATGAT+TGG - chr7_1:7004252-7004271 Msa1007460:CDS 35.0%
! TGAATACCATTTTCGAAGAG+CGG - chr7_1:7004276-7004295 Msa1007460:CDS 35.0%
TTGAAATTGTCTCTCGATTG+TGG + chr7_1:7004525-7004544 None:intergenic 35.0%
GTATCTCCATATACTTGTCA+TGG + chr7_1:7004559-7004578 None:intergenic 35.0%
GAGATACAAGTAGAATTTCG+TGG - chr7_1:7004572-7004591 Msa1007460:CDS 35.0%
AAATGCAACTGTTATCTCGA+AGG - chr7_1:7004596-7004615 Msa1007460:CDS 35.0%
! ATCTACATACACCGTTTTAG+AGG - chr7_1:7004640-7004659 Msa1007460:CDS 35.0%
! GACAATACTCTCCTCTAAAA+CGG + chr7_1:7004654-7004673 None:intergenic 35.0%
CCTTCAAATCTTTCTATGTG+TGG + chr7_1:7004914-7004933 None:intergenic 35.0%
CCACACATAGAAAGATTTGA+AGG - chr7_1:7004911-7004930 Msa1007460:CDS 35.0%
AAATGGTCTAGCAAGAAGTT+GGG - chr7_1:7005016-7005035 Msa1007460:CDS 35.0%
! ATTAGTTTACAGCCACATTG+TGG - chr7_1:7005043-7005062 Msa1007460:CDS 35.0%
GGATTAAGAATTGGTTGATC+AGG + chr7_1:7005121-7005140 None:intergenic 35.0%
! TTTCACAATCTTTTCAGTGG+TGG + chr7_1:7005191-7005210 None:intergenic 35.0%
AAAACCAATTGTTTCGGTTG+TGG - chr7_1:7005234-7005253 Msa1007460:CDS 35.0%
TCAGACATAGGAAGTAATGT+AGG + chr7_1:7005370-7005389 None:intergenic 35.0%
ACATTACTTCCTATGTCTGA+TGG - chr7_1:7005370-7005389 Msa1007460:CDS 35.0%
CATTACTTCCTATGTCTGAT+GGG - chr7_1:7005371-7005390 Msa1007460:CDS 35.0%
AAAACCACTAGTTGACTGTT+GGG + chr7_1:7005434-7005453 None:intergenic 35.0%
TAAAACCACTAGTTGACTGT+TGG + chr7_1:7005435-7005454 None:intergenic 35.0%
GGATGATCGATCAATATAGG+AGG + chr7_1:7003060-7003079 None:intergenic 40.0%
CGTGAATATGCCATGAAACA+AGG - chr7_1:7003237-7003256 Msa1007460:intron 40.0%
GTTGGATTCGTCTTCAAAGT+TGG + chr7_1:7003366-7003385 None:intergenic 40.0%
GAGCAATCAAGTTTCTTCGT+TGG + chr7_1:7003384-7003403 None:intergenic 40.0%
GCAAACAACCGTGATTTAGT+TGG + chr7_1:7003486-7003505 None:intergenic 40.0%
ACTAAATCACGGTTGTTTGC+TGG - chr7_1:7003486-7003505 Msa1007460:CDS 40.0%
AGATTGATATGCATGCACAG+CGG - chr7_1:7003517-7003536 Msa1007460:CDS 40.0%
GAACAAAAGTTTCCGTTCCA+TGG - chr7_1:7003575-7003594 Msa1007460:CDS 40.0%
GAGAGATGTCAGAAACTTTG+TGG - chr7_1:7003638-7003657 Msa1007460:CDS 40.0%
GCAAAAGAAAGACACCTTCT+CGG - chr7_1:7003660-7003679 Msa1007460:CDS 40.0%
CAAAAGAAAGACACCTTCTC+GGG - chr7_1:7003661-7003680 Msa1007460:CDS 40.0%
TTCCCTCATTCTAGCAAAGT+AGG + chr7_1:7003715-7003734 None:intergenic 40.0%
AGGTCTGCCTATGAATACTT+TGG - chr7_1:7003816-7003835 Msa1007460:CDS 40.0%
ATGATTGACACCAACAAACG+TGG + chr7_1:7003898-7003917 None:intergenic 40.0%
!! TTGTTGGTGTCAATCATCAC+GGG - chr7_1:7003901-7003920 Msa1007460:CDS 40.0%
AAGACCGCAACCTAGTAAAA+TGG + chr7_1:7003931-7003950 None:intergenic 40.0%
AAGATACCAAGTCCTTTACC+TGG - chr7_1:7003961-7003980 Msa1007460:CDS 40.0%
TGTTTCGAACAACCAGGTAA+AGG + chr7_1:7003976-7003995 None:intergenic 40.0%
TTACCTGGTTGTTCGAAACA+TGG - chr7_1:7003976-7003995 Msa1007460:CDS 40.0%
TGATCGGTTACAATTCCCAT+TGG + chr7_1:7004026-7004045 None:intergenic 40.0%
AATTGTAACCGATCAGTGCA+AGG - chr7_1:7004031-7004050 Msa1007460:CDS 40.0%
TTCCTAATACTAGGCATAGG+TGG - chr7_1:7004081-7004100 Msa1007460:CDS 40.0%
TTGTGTGTATGATTCTCTGC+GGG - chr7_1:7004187-7004206 Msa1007460:CDS 40.0%
!!! CGGGTTGATGATTTTGTTGT+TGG - chr7_1:7004206-7004225 Msa1007460:CDS 40.0%
! GAATACCATTTTCGAAGAGC+GGG - chr7_1:7004277-7004296 Msa1007460:CDS 40.0%
!! ATTCCTTTTCAGCCTTGTCT+TGG + chr7_1:7004451-7004470 None:intergenic 40.0%
! AGGAATACGAGGCAGATTTT+CGG - chr7_1:7004465-7004484 Msa1007460:CDS 40.0%
TCAAGCACAATCATTCCATG+CGG - chr7_1:7004491-7004510 Msa1007460:CDS 40.0%
ATACTTGTCATGGGTGTACT+CGG + chr7_1:7004549-7004568 None:intergenic 40.0%
GTACACCCATGACAAGTATA+TGG - chr7_1:7004550-7004569 Msa1007460:CDS 40.0%
!! TTAGAGGAGAGTATTGTCTG+TGG - chr7_1:7004656-7004675 Msa1007460:CDS 40.0%
!! TGTTTGCTGTTTGAGTTCAG+AGG - chr7_1:7004743-7004762 Msa1007460:CDS 40.0%
!! AGACATTCGCTTTTCGTACT+TGG - chr7_1:7004776-7004795 Msa1007460:CDS 40.0%
TGGTCATCTTAGAGTGAAAG+AGG - chr7_1:7004796-7004815 Msa1007460:CDS 40.0%
CAAATGGTCTAGCAAGAAGT+TGG - chr7_1:7005015-7005034 Msa1007460:CDS 40.0%
GGATCATAGCTTAAACACGA+TGG - chr7_1:7005075-7005094 Msa1007460:CDS 40.0%
TCATAGCTTAAACACGATGG+AGG - chr7_1:7005078-7005097 Msa1007460:CDS 40.0%
!! TCCGTTAAAAGTACCACGTA+AGG - chr7_1:7005138-7005157 Msa1007460:CDS 40.0%
! CCCTTACGTGGTACTTTTAA+CGG + chr7_1:7005142-7005161 None:intergenic 40.0%
!! CCGTTAAAAGTACCACGTAA+GGG - chr7_1:7005139-7005158 Msa1007460:CDS 40.0%
ACTTCCACAACCGAAACAAT+TGG + chr7_1:7005241-7005260 None:intergenic 40.0%
TTTCGGTTGTGGAAGTAAGT+TGG - chr7_1:7005245-7005264 Msa1007460:CDS 40.0%
TGCATCAATGAGCAAAGATG+TGG - chr7_1:7005465-7005484 Msa1007460:CDS 40.0%
CATCCTTTATTACCCCCTGA+CGG - chr7_1:7003075-7003094 Msa1007460:CDS 45.0%
! GATCGCAAACCCTTGTTTCA+TGG + chr7_1:7003250-7003269 None:intergenic 45.0%
! AACTCTAAGAAAGGGTCCGA+TGG - chr7_1:7003279-7003298 Msa1007460:intron 45.0%
GGATTCGTCTTCAAAGTTGG+TGG + chr7_1:7003363-7003382 None:intergenic 45.0%
TAAACGATCAGGCAGGTGTA+CGG - chr7_1:7003550-7003569 Msa1007460:CDS 45.0%
CTATGAGATTGACATGGACG+AGG - chr7_1:7003752-7003771 Msa1007460:CDS 45.0%
! ATGCCATTTGCCACGTTTGT+TGG - chr7_1:7003885-7003904 Msa1007460:CDS 45.0%
ACACCAACAAACGTGGCAAA+TGG + chr7_1:7003891-7003910 None:intergenic 45.0%
! CACGGGCAATCCATTTTACT+AGG - chr7_1:7003918-7003937 Msa1007460:CDS 45.0%
GAACAACCAGGTAAAGGACT+TGG + chr7_1:7003970-7003989 None:intergenic 45.0%
TAGCCATGTTTCGAACAACC+AGG + chr7_1:7003982-7004001 None:intergenic 45.0%
GGTTGTTCGAAACATGGCTA+AGG - chr7_1:7003982-7004001 Msa1007460:CDS 45.0%
TCGGTTACAATTCCCATTGG+AGG + chr7_1:7004023-7004042 None:intergenic 45.0%
GGCTATGCAGAATGCAATTC+AGG - chr7_1:7004052-7004071 Msa1007460:CDS 45.0%
CACCACCTATGCCTAGTATT+AGG + chr7_1:7004086-7004105 None:intergenic 45.0%
TCTTTCCCGCTCTTCGAAAA+TGG + chr7_1:7004285-7004304 None:intergenic 45.0%
! TTTTCGAAGAGCGGGAAAGA+TGG - chr7_1:7004285-7004304 Msa1007460:CDS 45.0%
TTTCGAAGAGCGGGAAAGAT+GGG - chr7_1:7004286-7004305 Msa1007460:CDS 45.0%
! CCTCTGTGTTGTTGACATTC+CGG + chr7_1:7004342-7004361 None:intergenic 45.0%
ACTCCAAGACAAGGCTGAAA+AGG - chr7_1:7004445-7004464 Msa1007460:CDS 45.0%
CAAGGCTGAAAAGGAATACG+AGG - chr7_1:7004454-7004473 Msa1007460:CDS 45.0%
CAAGCACAATCATTCCATGC+GGG - chr7_1:7004492-7004511 Msa1007460:CDS 45.0%
ATTGTGGAATTTGACCCGCA+TGG + chr7_1:7004509-7004528 None:intergenic 45.0%
! TCTCGAAGGTGTGACTACAA+TGG - chr7_1:7004610-7004629 Msa1007460:CDS 45.0%
TTTACAGCCACATTGTGGTG+TGG - chr7_1:7005048-7005067 Msa1007460:CDS 45.0%
TTACAGCCACATTGTGGTGT+GGG - chr7_1:7005049-7005068 Msa1007460:CDS 45.0%
GCTTGAAACCCATCAGACAT+AGG + chr7_1:7005382-7005401 None:intergenic 45.0%
!! TCTGATGGGTTTCAAGCGTA+CGG - chr7_1:7005385-7005404 Msa1007460:CDS 45.0%
TCATCCCAACAGTCAACTAG+TGG - chr7_1:7005427-7005446 Msa1007460:CDS 45.0%
TCTCCGTCAGGGGGTAATAA+AGG + chr7_1:7003081-7003100 None:intergenic 50.0%
! TGCTGCTCGTGTTGACGTTT+CGG - chr7_1:7003113-7003132 Msa1007460:CDS 50.0%
! CGTGTTGACGTTTCGGATTC+CGG - chr7_1:7003120-7003139 Msa1007460:CDS 50.0%
! GTGTTGACGTTTCGGATTCC+GGG - chr7_1:7003121-7003140 Msa1007460:CDS 50.0%
AAACGATCAGGCAGGTGTAC+GGG - chr7_1:7003551-7003570 Msa1007460:CDS 50.0%
CGGCATCACATACCATGGAA+CGG + chr7_1:7003590-7003609 None:intergenic 50.0%
CGTTCCATGGTATGTGATGC+CGG - chr7_1:7003588-7003607 Msa1007460:CDS 50.0%
AGAAAGACACCTTCTCGGGA+AGG - chr7_1:7003665-7003684 Msa1007460:CDS 50.0%
GGCTAAGGTGTATGTCTTCG+AGG - chr7_1:7003997-7004016 Msa1007460:CDS 50.0%
TATGTCTTCGAGGCCTCCAA+TGG - chr7_1:7004007-7004026 Msa1007460:CDS 50.0%
ATGTCTTCGAGGCCTCCAAT+GGG - chr7_1:7004008-7004027 Msa1007460:CDS 50.0%
! CTGCATAGCCTTGCACTGAT+CGG + chr7_1:7004042-7004061 None:intergenic 50.0%
CTAGGCATAGGTGGTGTCTA+TGG - chr7_1:7004090-7004109 Msa1007460:CDS 50.0%
CCGGAATGTCAACAACACAG+AGG - chr7_1:7004339-7004358 Msa1007460:CDS 50.0%
GACGTCCTCGAACTAATCGT+CGG - chr7_1:7005161-7005180 Msa1007460:CDS 50.0%
! GACAACCGACGATTAGTTCG+AGG + chr7_1:7005169-7005188 None:intergenic 50.0%
! ATCAGCTAGCTCTCCGTCAG+GGG + chr7_1:7003091-7003110 None:intergenic 55.0%
! CATCAGCTAGCTCTCCGTCA+GGG + chr7_1:7003092-7003111 None:intergenic 55.0%
TCCATGGTATGTGATGCCGG+TGG - chr7_1:7003591-7003610 Msa1007460:CDS 55.0%
ACCACCGGCATCACATACCA+TGG + chr7_1:7003595-7003614 None:intergenic 55.0%
AGACACCTTCTCGGGAAGGA+AGG - chr7_1:7003669-7003688 Msa1007460:CDS 55.0%
CATCTCCTTCCTTCCCGAGA+AGG + chr7_1:7003677-7003696 None:intergenic 55.0%
CTTCTCGGGAAGGAAGGAGA+TGG - chr7_1:7003675-7003694 Msa1007460:CDS 55.0%
TCTGGGCTGATGCACGTAGT+AGG - chr7_1:7003796-7003815 Msa1007460:CDS 55.0%
CGACAACGCACTCCAAGACA+AGG - chr7_1:7004436-7004455 Msa1007460:CDS 55.0%
AGCCACATTGTGGTGTGGGA+GGG - chr7_1:7005053-7005072 Msa1007460:CDS 55.0%
! TCAGCTAGCTCTCCGTCAGG+GGG + chr7_1:7003090-7003109 None:intergenic 60.0%
! CCATCAGCTAGCTCTCCGTC+AGG + chr7_1:7003093-7003112 None:intergenic 60.0%
CCTGACGGAGAGCTAGCTGA+TGG - chr7_1:7003090-7003109 Msa1007460:CDS 60.0%
TCGGGAAGGAAGGAGATGGC+AGG - chr7_1:7003679-7003698 Msa1007460:CDS 60.0%
CGGGAAGGAAGGAGATGGCA+GGG - chr7_1:7003680-7003699 Msa1007460:CDS 60.0%
CAGCCACATTGTGGTGTGGG+AGG - chr7_1:7005052-7005071 Msa1007460:CDS 60.0%
GCCACATTGTGGTGTGGGAG+GGG - chr7_1:7005054-7005073 Msa1007460:CDS 60.0%
TCCCCTCCCACACCACAATG+TGG + chr7_1:7005058-7005077 None:intergenic 60.0%
GTTCGAGGACGTCCCTTACG+TGG + chr7_1:7005154-7005173 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 7003045 7005504 7003045 ID=Msa1007460;Name=Msa1007460
chr7_1 mRNA 7003045 7005504 7003045 ID=Msa1007460-mRNA-1;Parent=Msa1007460;Name=Msa1007460-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0|0|0.5|1|1|2|0|783
chr7_1 exon 7003291 7005504 7003291 ID=Msa1007460-mRNA-1:exon:2161;Parent=Msa1007460-mRNA-1
chr7_1 exon 7003045 7003182 7003045 ID=Msa1007460-mRNA-1:exon:2160;Parent=Msa1007460-mRNA-1
chr7_1 CDS 7003291 7005504 7003291 ID=Msa1007460-mRNA-1:cds;Parent=Msa1007460-mRNA-1
chr7_1 CDS 7003045 7003182 7003045 ID=Msa1007460-mRNA-1:cds;Parent=Msa1007460-mRNA-1
Gene Sequence

>Msa1007460

ATGGCTGATGGTCCTCCTATATTGATCGATCATCCTTTATTACCCCCTGACGGAGAGCTAGCTGATGGTGCTGCTCGTGTTGACGTTTCGGATTCCGGGACCTTTGAAACAACAAATGCTGTCGCAACAGATAAATTCACGCCTACTATCGGTATGTCTTTTAAATCGATTGCAGATTGTAAGTCTTTTTACCGTGAATATGCCATGAAACAAGGGTTTGCGATCAAAACTAGAAACTCTAAGAAAGGGTCCGATGGCATGTTAAAATATTTCATTCTAACTTGTGCAAGAGAAGGTCACCATGAATCAAACATACCACCAACTTTGAAGACGAATCCAACGAAGAAACTTGATTGCTCAGCTAAGATAACGGTTGCTTTAAAGAAGGGTATATGGACTATTTTGTCTTTTAATTCATGTCATAATCATGAGATAAGTCCAACTAAATCACGGTTGTTTGCTGGCAATAAGAAGATTGATATGCATGCACAGCGGACAATTTTGATAAACGATCAGGCAGGTGTACGGGTGAACAAAAGTTTCCGTTCCATGGTATGTGATGCCGGTGGTTACGAAAATCTAACATTTGTGGAGAGAGATGTCAGAAACTTTGTGGCAAAAGAAAGACACCTTCTCGGGAAGGAAGGAGATGGCAGGGCACTTTTATCCTACTTTGCTAGAATGAGGGAATGCAACAAAGACTTTTTCTATGAGATTGACATGGACGAGGACTTTCATGTGCAGAATATTTTCTGGGCTGATGCACGTAGTAGGTCTGCCTATGAATACTTTGGTGATGTTGTCACGTTCGATACCACCTACTTGACAAACAAGTATGACATGCCATTTGCCACGTTTGTTGGTGTCAATCATCACGGGCAATCCATTTTACTAGGTTGCGGTCTTTTATCAGCTGAAGATACCAAGTCCTTTACCTGGTTGTTCGAAACATGGCTAAGGTGTATGTCTTCGAGGCCTCCAATGGGAATTGTAACCGATCAGTGCAAGGCTATGCAGAATGCAATTCAGGTTGTGTTTCCTAATACTAGGCATAGGTGGTGTCTATGGCATATAATGAGAAAAATTGCCGAAAAATTGAAAGGATATGCACAATACAAAGGAATAAAAAATGATATGAAAAATTGTGTGTATGATTCTCTGCGGGTTGATGATTTTGTTGTTGGGTGGACAACATTCATTGAAAAATATGGTTTGGGTGAAAATGATTGGTTGAATACCATTTTCGAAGAGCGGGAAAGATGGGTGCCATGTTATTTAAAAAATGATTTCTGGGCCGGAATGTCAACAACACAGAGGAGTGAAAGTATGAATGCTTTTTTCGATGGTTACATTAATGCAAGAACTTCTCTAAGCGAATTTGTAAAGCAATACGACAACGCACTCCAAGACAAGGCTGAAAAGGAATACGAGGCAGATTTTCGGTCTTCAAGCACAATCATTCCATGCGGGTCAAATTCCACAATCGAGAGACAATTTCAAGCCGAGTACACCCATGACAAGTATATGGAGATACAAGTAGAATTTCGTGGGAAATGCAACTGTTATCTCGAAGGTGTGACTACAATGGAATTTACATCTACATACACCGTTTTAGAGGAGAGTATTGTCTGTGGTAAACCGAACGAAACTAAGTATTGTGTTGATTTCAACAGGGAAGACAATAATGTTACGTGCACTTGTTTGCTGTTTGAGTTCAGAGGCATTTTGTGTAGACATTCGCTTTTCGTACTTGGTCATCTTAGAGTGAAAGAGGTTCCGTCTAAATTTATCTTGCCACAATGGAGTAAAAATGTGAAGAGAAAATATGCACACATGAAGACAAGTTACAATGCCAAAAAACTACAACCACACATAGAAAGATTTGAAGGTCTTTGCAAGACATTTTATGAAATTGCAGAATGTGCGGCTGAGACACCTAGTCAAACTTCTGATTTGTATGAAGAAATGATCAAATGGTCTAGCAAGAAGTTGGGCAAAATTAGTTTACAGCCACATTGTGGTGTGGGAGGGGATCATAGCTTAAACACGATGGAGGACTCATTATCACAGCAACCTGATCAACCAATTCTTAATCCGTTAAAAGTACCACGTAAGGGACGTCCTCGAACTAATCGTCGGTTGTCCACCACTGAAAAGATTGTGAAAAAAAGAAGCAAAATGCAAAGAAAAAAACCAATTGTTTCGGTTGTGGAACCTACATTACTTCCTATGTCTGATGGGTTTCAAGCGTACGGTGATACGCTTAACTACTTCTCATCCCAACAGTCAACTAGTGGTTTTATGTCATTACTTGCATCAATGAGCAAAGATGTGGATGCAGCTGAATTTTAA
Protein sequence

>Msa1007460

MADGPPILIDHPLLPPDGELADGAARVDVSDSGTFETTNAVATDKFTPTIGMSFKSIADCKSFYREYAMKQGFAIKTRNSKKGSDGMLKYFILTCAREGHHESNIPPTLKTNPTKKLDCSAKITVALKKGIWTILSFNSCHNHEISPTKSRLFAGNKKIDMHAQRTILINDQAGVRVNKSFRSMVCDAGGYENLTFVERDVRNFVAKERHLLGKEGDGRALLSYFARMRECNKDFFYEIDMDEDFHVQNIFWADARSRSAYEYFGDVVTFDTTYLTNKYDMPFATFVGVNHHGQSILLGCGLLSAEDTKSFTWLFETWLRCMSSRPPMGIVTDQCKAMQNAIQVVFPNTRHRWCLWHIMRKIAEKLKGYAQYKGIKNDMKNCVYDSLRVDDFVVGWTTFIEKYGLGENDWLNTIFEERERWVPCYLKNDFWAGMSTTQRSESMNAFFDGYINARTSLSEFVKQYDNALQDKAEKEYEADFRSSSTIIPCGSNSTIERQFQAEYTHDKYMEIQVEFRGKCNCYLEGVTTMEFTSTYTVLEESIVCGKPNETKYCVDFNREDNNVTCTCLLFEFRGILCRHSLFVLGHLRVKEVPSKFILPQWSKNVKRKYAHMKTSYNAKKLQPHIERFEGLCKTFYEIAECAAETPSQTSDLYEEMIKWSSKKLGKISLQPHCGVGGDHSLNTMEDSLSQQPDQPILNPLKVPRKGRPRTNRRLSTTEKIVKKRSKMQRKKPIVSVVEPTLLPMSDGFQAYGDTLNYFSSQQSTSGFMSLLASMSKDVDAAEF*