Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1007690 | KAG6505689.1 | 42.381 | 210 | 115 | 3 | 6 | 209 | 30 | 239 | 1.15e-43 | 158 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1007690 | sp|Q38997|KIN10_ARATH | 38.053 | 226 | 91 | 5 | 4 | 180 | 112 | 337 | 1.86e-36 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1007690 | M4DY86 | 34.472 | 322 | 110 | 8 | 4 | 224 | 112 | 433 | 1.88e-39 | 153 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1007690 | MtrunA17_Chr6g0468751 | 36.245 | 229 | 97 | 5 | 1 | 180 | 109 | 337 | 7.31e-34 | 127 |
| Msa1007690 | MtrunA17_Chr6g0453681 | 35.808 | 229 | 98 | 5 | 1 | 180 | 109 | 337 | 1.37e-33 | 125 |
| Msa1007690 | MtrunA17_Chr3g0132671 | 34.101 | 217 | 85 | 5 | 4 | 168 | 142 | 352 | 3.07e-29 | 114 |
| Msa1007690 | MtrunA17_Chr7g0218511 | 77.419 | 62 | 13 | 1 | 1 | 61 | 6 | 67 | 6.36e-27 | 99.0 |
| Msa1007690 | MtrunA17_Chr6g0453671 | 33.918 | 171 | 65 | 3 | 1 | 123 | 109 | 279 | 1.05e-24 | 100 |
| Msa1007690 | MtrunA17_Chr1g0150321 | 30.625 | 160 | 60 | 3 | 11 | 119 | 112 | 271 | 8.14e-16 | 75.5 |
| Msa1007690 | MtrunA17_Chr5g0428031 | 29.016 | 193 | 79 | 7 | 4 | 139 | 102 | 293 | 4.12e-14 | 70.9 |
| Msa1007690 | MtrunA17_Chr5g0441011 | 26.506 | 166 | 71 | 2 | 4 | 118 | 106 | 271 | 1.33e-13 | 69.3 |
| Msa1007690 | MtrunA17_Chr4g0072831 | 31.915 | 141 | 66 | 3 | 8 | 118 | 86 | 226 | 1.94e-13 | 68.2 |
| Msa1007690 | MtrunA17_Chr8g0346081 | 28.221 | 163 | 68 | 4 | 2 | 115 | 108 | 270 | 1.15e-12 | 66.6 |
| Msa1007690 | MtrunA17_Chr4g0013131 | 32.639 | 144 | 75 | 5 | 1 | 123 | 101 | 243 | 1.44e-12 | 66.2 |
| Msa1007690 | MtrunA17_Chr3g0107011 | 28.144 | 167 | 69 | 3 | 4 | 119 | 106 | 272 | 1.56e-12 | 66.2 |
| Msa1007690 | MtrunA17_Chr4g0074111 | 52.830 | 53 | 25 | 0 | 4 | 56 | 110 | 162 | 2.74e-12 | 65.5 |
| Msa1007690 | MtrunA17_Chr5g0432471 | 28.205 | 156 | 61 | 3 | 11 | 115 | 111 | 266 | 8.95e-12 | 63.9 |
| Msa1007690 | MtrunA17_Chr5g0432491 | 29.189 | 185 | 104 | 7 | 15 | 173 | 127 | 310 | 3.12e-11 | 62.4 |
| Msa1007690 | MtrunA17_Chr1g0188031 | 37.037 | 81 | 49 | 1 | 4 | 84 | 115 | 193 | 4.82e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1007690 | AT3G01090.3 | 38.053 | 226 | 91 | 5 | 4 | 180 | 112 | 337 | 1.90e-37 | 137 |
| Msa1007690 | AT3G01090.1 | 38.053 | 226 | 91 | 5 | 4 | 180 | 112 | 337 | 1.90e-37 | 137 |
| Msa1007690 | AT3G01090.2 | 38.053 | 226 | 91 | 5 | 4 | 180 | 135 | 360 | 2.08e-37 | 137 |
| Msa1007690 | AT3G29160.3 | 35.371 | 229 | 99 | 5 | 1 | 180 | 110 | 338 | 3.53e-36 | 130 |
| Msa1007690 | AT3G29160.1 | 35.371 | 229 | 99 | 5 | 1 | 180 | 110 | 338 | 3.82e-35 | 130 |
| Msa1007690 | AT3G29160.2 | 35.371 | 229 | 99 | 5 | 1 | 180 | 110 | 338 | 3.82e-35 | 130 |
| Msa1007690 | AT5G39440.1 | 33.498 | 203 | 85 | 6 | 15 | 168 | 123 | 324 | 2.07e-25 | 103 |
| Msa1007690 | AT4G24400.2 | 30.168 | 179 | 76 | 4 | 4 | 133 | 102 | 280 | 3.25e-17 | 80.1 |
| Msa1007690 | AT4G24400.1 | 30.168 | 179 | 76 | 4 | 4 | 133 | 102 | 280 | 4.07e-17 | 79.7 |
| Msa1007690 | AT5G25110.1 | 28.571 | 161 | 64 | 3 | 10 | 119 | 141 | 301 | 3.57e-15 | 74.3 |
| Msa1007690 | AT5G10930.1 | 27.647 | 170 | 72 | 4 | 1 | 119 | 102 | 271 | 2.87e-14 | 71.6 |
| Msa1007690 | AT5G21222.1 | 29.518 | 166 | 66 | 3 | 4 | 118 | 106 | 271 | 4.44e-14 | 71.2 |
| Msa1007690 | AT5G21222.2 | 29.518 | 166 | 66 | 3 | 4 | 118 | 106 | 271 | 4.44e-14 | 71.2 |
| Msa1007690 | AT5G21222.4 | 29.518 | 166 | 66 | 3 | 4 | 118 | 106 | 271 | 4.44e-14 | 71.2 |
| Msa1007690 | AT5G21222.3 | 29.518 | 166 | 66 | 3 | 4 | 118 | 106 | 271 | 4.44e-14 | 71.2 |
| Msa1007690 | AT5G21326.1 | 28.916 | 166 | 67 | 3 | 4 | 118 | 106 | 271 | 5.26e-14 | 70.9 |
| Msa1007690 | AT4G30960.1 | 27.326 | 172 | 74 | 3 | 1 | 121 | 113 | 284 | 1.15e-13 | 69.7 |
| Msa1007690 | AT1G01140.1 | 27.568 | 185 | 80 | 4 | 4 | 137 | 112 | 293 | 3.81e-13 | 68.2 |
| Msa1007690 | AT1G01140.3 | 27.568 | 185 | 80 | 4 | 4 | 137 | 112 | 293 | 3.94e-13 | 68.2 |
| Msa1007690 | AT1G01140.2 | 27.273 | 187 | 80 | 4 | 4 | 137 | 112 | 295 | 6.80e-13 | 67.8 |
| Msa1007690 | AT1G30270.1 | 25.926 | 189 | 87 | 4 | 2 | 137 | 122 | 310 | 1.12e-12 | 67.0 |
| Msa1007690 | AT1G30270.3 | 25.926 | 189 | 87 | 4 | 2 | 137 | 25 | 213 | 1.14e-12 | 66.6 |
| Msa1007690 | AT1G30270.2 | 25.926 | 189 | 87 | 4 | 2 | 137 | 122 | 310 | 1.32e-12 | 66.6 |
| Msa1007690 | AT2G26980.1 | 26.627 | 169 | 73 | 4 | 1 | 118 | 104 | 272 | 2.37e-12 | 65.9 |
| Msa1007690 | AT2G26980.5 | 27.219 | 169 | 72 | 3 | 1 | 118 | 104 | 272 | 2.44e-12 | 65.9 |
| Msa1007690 | AT2G26980.3 | 26.627 | 169 | 73 | 4 | 1 | 118 | 104 | 272 | 2.52e-12 | 65.9 |
| Msa1007690 | AT2G26980.4 | 26.627 | 169 | 73 | 4 | 1 | 118 | 114 | 282 | 2.60e-12 | 65.9 |
| Msa1007690 | AT5G01810.1 | 24.706 | 170 | 77 | 2 | 1 | 119 | 101 | 270 | 6.97e-12 | 64.7 |
| Msa1007690 | AT5G01810.2 | 24.706 | 170 | 77 | 2 | 1 | 119 | 101 | 270 | 6.97e-12 | 64.7 |
| Msa1007690 | AT5G01810.3 | 24.706 | 170 | 77 | 2 | 1 | 119 | 101 | 270 | 7.01e-12 | 64.3 |
| Msa1007690 | AT2G26980.2 | 36.585 | 82 | 51 | 1 | 4 | 85 | 107 | 187 | 4.95e-11 | 61.2 |
| Msa1007690 | AT2G25090.1 | 53.061 | 49 | 23 | 0 | 11 | 59 | 116 | 164 | 7.66e-11 | 61.6 |
Find 49 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAATATGTTAGTTGAAAT+TGG | 0.146112 | 7_1:-7335230 | Msa1007690:CDS |
| CATCCCACTTATCAATTCTT+TGG | 0.244961 | 7_1:+7335467 | None:intergenic |
| CGGCCCTGTCGAAGTCTATT+TGG | 0.262696 | 7_1:+7335346 | None:intergenic |
| TGTACTCAAGTTTGAACTTC+AGG | 0.320489 | 7_1:-7334171 | Msa1007690:CDS |
| CTGTCTAGCTCTCCAGTTGT+AGG | 0.326281 | 7_1:+7334229 | None:intergenic |
| CGTCTTGTCTCCCTTCTCTA+TGG | 0.334383 | 7_1:+7335180 | None:intergenic |
| CTTCCTAGTTATCTATCTTC+TGG | 0.338162 | 7_1:-7335492 | Msa1007690:CDS |
| AATGTGAAGCTAGCTGATTT+TGG | 0.355745 | 7_1:-7335929 | Msa1007690:CDS |
| AGACAGGAGGTTAGCAATCT+TGG | 0.372676 | 7_1:-7334212 | Msa1007690:CDS |
| GGAAGAGGTCTTCAGAGCTC+TGG | 0.406444 | 7_1:-7334285 | Msa1007690:CDS |
| CAGTAAACGTATAGGACATC+TGG | 0.421887 | 7_1:-7335990 | Msa1007690:CDS |
| AAAGAATTGGTACCTACAAC+TGG | 0.434072 | 7_1:-7334241 | Msa1007690:CDS |
| CATGTATGTTGGAAAAGAAT+TGG | 0.438083 | 7_1:-7334254 | Msa1007690:CDS |
| TAAACCTGAGAATATATTGT+TGG | 0.455037 | 7_1:-7335963 | Msa1007690:CDS |
| CTACAACTGGAGAGCTAGAC+AGG | 0.456078 | 7_1:-7334228 | Msa1007690:CDS |
| GCGTCCAACAATATATTCTC+AGG | 0.486314 | 7_1:+7335959 | None:intergenic |
| GGACCTTCCTCGTTACTTGG+TGG | 0.500239 | 7_1:-7335379 | Msa1007690:CDS |
| ACAGCCAAATAGACTTCGAC+AGG | 0.501694 | 7_1:-7335350 | Msa1007690:CDS |
| GACCTTCCTCGTTACTTGGT+GGG | 0.503408 | 7_1:-7335378 | Msa1007690:CDS |
| GAAGAGGTCTTCAGAGCTCT+GGG | 0.505745 | 7_1:-7334284 | Msa1007690:CDS |
| CTAAACACCTACTTCAGGTC+CGG | 0.513416 | 7_1:+7335715 | None:intergenic |
| ATTGATAAGTGGGATGCTTA+CGG | 0.524008 | 7_1:-7335460 | Msa1007690:CDS |
| AAAGCATCCTTGGTTTGCTA+CGG | 0.531440 | 7_1:-7335400 | Msa1007690:CDS |
| CTAATAGAACTCCATAGAGA+AGG | 0.537831 | 7_1:-7335191 | Msa1007690:CDS |
| TGCTCCTCCGTTAGACATGA+TGG | 0.537941 | 7_1:-7334306 | Msa1007690:CDS |
| AGATTATCTTTGCAAAGTAG+AGG | 0.555942 | 7_1:+7336032 | None:intergenic |
| TCCGTTAGACATGATGGAAG+AGG | 0.556295 | 7_1:-7334300 | Msa1007690:CDS |
| GCACCAGAAGATAGATAACT+AGG | 0.556831 | 7_1:+7335489 | None:intergenic |
| TGGGAGAATTGCATGTATGT+TGG | 0.562798 | 7_1:-7334265 | Msa1007690:CDS |
| TTCTGTAACAGTAAACGTAT+AGG | 0.565756 | 7_1:-7335998 | Msa1007690:CDS |
| TCTTGGTGACCACGGCGGAA+TGG | 0.572413 | 7_1:-7334195 | Msa1007690:CDS |
| TAATAGAACTCCATAGAGAA+GGG | 0.577461 | 7_1:-7335190 | Msa1007690:CDS |
| GGTGCCAAAGAATTGATAAG+TGG | 0.578697 | 7_1:-7335471 | Msa1007690:CDS |
| ACCTCTTCCATCATGTCTAA+CGG | 0.585574 | 7_1:+7334299 | None:intergenic |
| GTCACAGGAAAACTGTATGC+CGG | 0.595347 | 7_1:-7335734 | Msa1007690:CDS |
| GTTAGCAATCTTGGTGACCA+CGG | 0.618829 | 7_1:-7334203 | Msa1007690:CDS |
| TGCAAAGATAATCTCTGCTG+TGG | 0.637698 | 7_1:-7336023 | Msa1007690:CDS |
| GGAAGGTCCGTAGCAAACCA+AGG | 0.657930 | 7_1:+7335393 | None:intergenic |
| GATAAGTGGGATGCTTACGG+TGG | 0.667341 | 7_1:-7335457 | Msa1007690:CDS |
| TGCCCACCAAGTAACGAGGA+AGG | 0.667349 | 7_1:+7335376 | None:intergenic |
| TACTTGCCCACCAAGTAACG+AGG | 0.667858 | 7_1:+7335372 | None:intergenic |
| GTGCCAAAGAATTGATAAGT+GGG | 0.687407 | 7_1:-7335470 | Msa1007690:CDS |
| ATGTACGCATGATTTCGCAT+AGG | 0.689283 | 7_1:+7335906 | None:intergenic |
| TAGAGAAGGGAGACAAGACG+AGG | 0.691860 | 7_1:-7335177 | Msa1007690:intron |
| CAGCCAAATAGACTTCGACA+GGG | 0.711342 | 7_1:-7335349 | Msa1007690:CDS |
| TCTTCCATCATGTCTAACGG+AGG | 0.724342 | 7_1:+7334302 | None:intergenic |
| TGAGTACAACCATTCCGCCG+TGG | 0.727258 | 7_1:+7334186 | None:intergenic |
| AGCAATCTTGGTGACCACGG+CGG | 0.732737 | 7_1:-7334200 | Msa1007690:CDS |
| CAACTGGAGAGCTAGACAGG+AGG | 0.744028 | 7_1:-7334225 | Msa1007690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATATTGTTATTATTTTTAT+CGG | + | chr7_1:7334780-7334799 | None:intergenic | 10.0% |
| !! | GATAAAAATAATAACAATAT+CGG | - | chr7_1:7334779-7334798 | Msa1007690:intron | 10.0% |
| !!! | GATATTGTTATTATTTTTAT+CGG | + | chr7_1:7334780-7334799 | None:intergenic | 10.0% |
| !! | GATAAAAATAATAACAATAT+CGG | - | chr7_1:7334779-7334798 | Msa1007690:intron | 10.0% |
| !!! | TTTTGTCATTTGTTATATAT+AGG | - | chr7_1:7334680-7334699 | Msa1007690:intron | 15.0% |
| !! | CTAAATATATTCTAATAGTT+AGG | - | chr7_1:7335753-7335772 | Msa1007690:intron | 15.0% |
| !!! | TTTTGTCATTTGTTATATAT+AGG | - | chr7_1:7334680-7334699 | Msa1007690:intron | 15.0% |
| !! | CTAAATATATTCTAATAGTT+AGG | - | chr7_1:7335753-7335772 | Msa1007690:intron | 15.0% |
| !!! | TTTTGGTATTACTTTTGTTA+AGG | - | chr7_1:7334890-7334909 | Msa1007690:intron | 20.0% |
| !!! | ATTTTGGTTAAAAACAAATC+GGG | + | chr7_1:7334931-7334950 | None:intergenic | 20.0% |
| !!! | GATTTTGGTTAAAAACAAAT+CGG | + | chr7_1:7334932-7334951 | None:intergenic | 20.0% |
| !!! | ATTTTTTACCATTGAAAATG+TGG | - | chr7_1:7335442-7335461 | Msa1007690:CDS | 20.0% |
| !!! | TTTTTTACCATTGAAAATGT+GGG | - | chr7_1:7335443-7335462 | Msa1007690:CDS | 20.0% |
| !!! | TTTTGGTATTACTTTTGTTA+AGG | - | chr7_1:7334890-7334909 | Msa1007690:intron | 20.0% |
| !!! | ATTTTGGTTAAAAACAAATC+GGG | + | chr7_1:7334931-7334950 | None:intergenic | 20.0% |
| !!! | GATTTTGGTTAAAAACAAAT+CGG | + | chr7_1:7334932-7334951 | None:intergenic | 20.0% |
| !!! | ATTTTTTACCATTGAAAATG+TGG | - | chr7_1:7335442-7335461 | Msa1007690:CDS | 20.0% |
| !!! | TTTTTTACCATTGAAAATGT+GGG | - | chr7_1:7335443-7335462 | Msa1007690:CDS | 20.0% |
| ! | TAAACCTGAGAATATATTGT+TGG | - | chr7_1:7334246-7334265 | Msa1007690:CDS | 25.0% |
| !!! | TTTGTTTTTGTGAGTTTGTA+AGG | - | chr7_1:7334623-7334642 | Msa1007690:intron | 25.0% |
| ! | AAAAGTAATACCAAAACTCA+CGG | + | chr7_1:7334886-7334905 | None:intergenic | 25.0% |
| !! | TGATTTTCCAGATTGATAAA+GGG | - | chr7_1:7334953-7334972 | Msa1007690:intron | 25.0% |
| ! | CTGAATATGTTAGTTGAAAT+TGG | - | chr7_1:7334979-7334998 | Msa1007690:intron | 25.0% |
| ! | AATCACTTCATCAAATAAAG+CGG | + | chr7_1:7335240-7335259 | None:intergenic | 25.0% |
| ! | TATACTCTATAAACAGTATC+CGG | - | chr7_1:7335362-7335381 | Msa1007690:CDS | 25.0% |
| ! | ATTTATATACAAACCTGTCT+TGG | - | chr7_1:7335680-7335699 | Msa1007690:intron | 25.0% |
| ! | TTCTATATTTAGCAATAGCT+TGG | + | chr7_1:7335725-7335744 | None:intergenic | 25.0% |
| !! | GATTTTCTTCATATAGAAAC+TGG | - | chr7_1:7335775-7335794 | Msa1007690:intron | 25.0% |
| ! | TAAACCTGAGAATATATTGT+TGG | - | chr7_1:7334246-7334265 | Msa1007690:CDS | 25.0% |
| !!! | TTTGTTTTTGTGAGTTTGTA+AGG | - | chr7_1:7334623-7334642 | Msa1007690:intron | 25.0% |
| ! | AAAAGTAATACCAAAACTCA+CGG | + | chr7_1:7334886-7334905 | None:intergenic | 25.0% |
| !! | TGATTTTCCAGATTGATAAA+GGG | - | chr7_1:7334953-7334972 | Msa1007690:intron | 25.0% |
| ! | CTGAATATGTTAGTTGAAAT+TGG | - | chr7_1:7334979-7334998 | Msa1007690:intron | 25.0% |
| ! | AATCACTTCATCAAATAAAG+CGG | + | chr7_1:7335240-7335259 | None:intergenic | 25.0% |
| ! | TATACTCTATAAACAGTATC+CGG | - | chr7_1:7335362-7335381 | Msa1007690:CDS | 25.0% |
| ! | ATTTATATACAAACCTGTCT+TGG | - | chr7_1:7335680-7335699 | Msa1007690:intron | 25.0% |
| ! | TTCTATATTTAGCAATAGCT+TGG | + | chr7_1:7335725-7335744 | None:intergenic | 25.0% |
| !! | GATTTTCTTCATATAGAAAC+TGG | - | chr7_1:7335775-7335794 | Msa1007690:intron | 25.0% |
| AGATTATCTTTGCAAAGTAG+AGG | + | chr7_1:7334180-7334199 | None:intergenic | 30.0% | |
| TTCTGTAACAGTAAACGTAT+AGG | - | chr7_1:7334211-7334230 | Msa1007690:CDS | 30.0% | |
| ! | AGAAGAGTATGAATCATAAG+AGG | + | chr7_1:7334443-7334462 | None:intergenic | 30.0% |
| !!! | TTCATACTCTTCTTTTTTGC+AGG | - | chr7_1:7334450-7334469 | Msa1007690:intron | 30.0% |
| AACAGACGAATTATGATGAT+TGG | + | chr7_1:7334661-7334680 | None:intergenic | 30.0% | |
| ! | TACTTTTGTTAAGGCACAAA+AGG | - | chr7_1:7334899-7334918 | Msa1007690:intron | 30.0% |
| ! | AATCTGGAAAATCACGATTT+TGG | + | chr7_1:7334947-7334966 | None:intergenic | 30.0% |
| ! | GTGATTTTCCAGATTGATAA+AGG | - | chr7_1:7334952-7334971 | Msa1007690:intron | 30.0% |
| TAATAGAACTCCATAGAGAA+GGG | - | chr7_1:7335019-7335038 | Msa1007690:intron | 30.0% | |
| ! | GGTATCTAAAGTGAAAATGA+AGG | + | chr7_1:7335065-7335084 | None:intergenic | 30.0% |
| ATAACATACAGTAGCAATCT+GGG | + | chr7_1:7335094-7335113 | None:intergenic | 30.0% | |
| AATAACATACAGTAGCAATC+TGG | + | chr7_1:7335095-7335114 | None:intergenic | 30.0% | |
| CACATGGGAATACAATTTAA+AGG | + | chr7_1:7335313-7335332 | None:intergenic | 30.0% | |
| ! | TAGAAAACCCACATTTTCAA+TGG | + | chr7_1:7335453-7335472 | None:intergenic | 30.0% |
| ! | GGTTTTCTATTCTTGATACT+AGG | - | chr7_1:7335464-7335483 | Msa1007690:CDS | 30.0% |
| CACATGATTATTCAATGAGA+AGG | + | chr7_1:7335657-7335676 | None:intergenic | 30.0% | |
| CATGTATGTTGGAAAAGAAT+TGG | - | chr7_1:7335955-7335974 | Msa1007690:CDS | 30.0% | |
| AGATTATCTTTGCAAAGTAG+AGG | + | chr7_1:7334180-7334199 | None:intergenic | 30.0% | |
| TTCTGTAACAGTAAACGTAT+AGG | - | chr7_1:7334211-7334230 | Msa1007690:CDS | 30.0% | |
| ! | AGAAGAGTATGAATCATAAG+AGG | + | chr7_1:7334443-7334462 | None:intergenic | 30.0% |
| !!! | TTCATACTCTTCTTTTTTGC+AGG | - | chr7_1:7334450-7334469 | Msa1007690:intron | 30.0% |
| AACAGACGAATTATGATGAT+TGG | + | chr7_1:7334661-7334680 | None:intergenic | 30.0% | |
| ! | TACTTTTGTTAAGGCACAAA+AGG | - | chr7_1:7334899-7334918 | Msa1007690:intron | 30.0% |
| ! | AATCTGGAAAATCACGATTT+TGG | + | chr7_1:7334947-7334966 | None:intergenic | 30.0% |
| ! | GTGATTTTCCAGATTGATAA+AGG | - | chr7_1:7334952-7334971 | Msa1007690:intron | 30.0% |
| TAATAGAACTCCATAGAGAA+GGG | - | chr7_1:7335019-7335038 | Msa1007690:intron | 30.0% | |
| ! | GGTATCTAAAGTGAAAATGA+AGG | + | chr7_1:7335065-7335084 | None:intergenic | 30.0% |
| ATAACATACAGTAGCAATCT+GGG | + | chr7_1:7335094-7335113 | None:intergenic | 30.0% | |
| AATAACATACAGTAGCAATC+TGG | + | chr7_1:7335095-7335114 | None:intergenic | 30.0% | |
| CACATGGGAATACAATTTAA+AGG | + | chr7_1:7335313-7335332 | None:intergenic | 30.0% | |
| ! | TAGAAAACCCACATTTTCAA+TGG | + | chr7_1:7335453-7335472 | None:intergenic | 30.0% |
| ! | GGTTTTCTATTCTTGATACT+AGG | - | chr7_1:7335464-7335483 | Msa1007690:CDS | 30.0% |
| CACATGATTATTCAATGAGA+AGG | + | chr7_1:7335657-7335676 | None:intergenic | 30.0% | |
| CATGTATGTTGGAAAAGAAT+TGG | - | chr7_1:7335955-7335974 | Msa1007690:CDS | 30.0% | |
| !! | AATGTGAAGCTAGCTGATTT+TGG | - | chr7_1:7334280-7334299 | Msa1007690:CDS | 35.0% |
| CTTTACTAGTTCGATGATCT+CGG | + | chr7_1:7334590-7334609 | None:intergenic | 35.0% | |
| CTTCCTAGTTATCTATCTTC+TGG | - | chr7_1:7334717-7334736 | Msa1007690:intron | 35.0% | |
| GTGCCAAAGAATTGATAAGT+GGG | - | chr7_1:7334739-7334758 | Msa1007690:intron | 35.0% | |
| CATCCCACTTATCAATTCTT+TGG | + | chr7_1:7334745-7334764 | None:intergenic | 35.0% | |
| ATTGATAAGTGGGATGCTTA+CGG | - | chr7_1:7334749-7334768 | Msa1007690:intron | 35.0% | |
| TCAGAATCCCTTTATCAATC+TGG | + | chr7_1:7334963-7334982 | None:intergenic | 35.0% | |
| CTAATAGAACTCCATAGAGA+AGG | - | chr7_1:7335018-7335037 | Msa1007690:intron | 35.0% | |
| TCTTGAAGCTGAGTTTCAAA+AGG | - | chr7_1:7335155-7335174 | Msa1007690:intron | 35.0% | |
| CAAAGCAAGATTTACTCATC+CGG | + | chr7_1:7335384-7335403 | None:intergenic | 35.0% | |
| ! | CTAGGCAAAGCTCATAATTT+TGG | - | chr7_1:7335482-7335501 | Msa1007690:CDS | 35.0% |
| TTTGAAAAGCAACTTGACCA+GGG | + | chr7_1:7335550-7335569 | None:intergenic | 35.0% | |
| !!! | CAAGTTGCTTTTCAAAGAGT+AGG | - | chr7_1:7335554-7335573 | Msa1007690:intron | 35.0% |
| TCATATAGAAACTGGATTCC+TGG | - | chr7_1:7335783-7335802 | Msa1007690:intron | 35.0% | |
| AAAGAATTGGTACCTACAAC+TGG | - | chr7_1:7335968-7335987 | Msa1007690:CDS | 35.0% | |
| TGTACTCAAGTTTGAACTTC+AGG | - | chr7_1:7336038-7336057 | Msa1007690:CDS | 35.0% | |
| !! | AATGTGAAGCTAGCTGATTT+TGG | - | chr7_1:7334280-7334299 | Msa1007690:CDS | 35.0% |
| CTTTACTAGTTCGATGATCT+CGG | + | chr7_1:7334590-7334609 | None:intergenic | 35.0% | |
| CTTCCTAGTTATCTATCTTC+TGG | - | chr7_1:7334717-7334736 | Msa1007690:intron | 35.0% | |
| GTGCCAAAGAATTGATAAGT+GGG | - | chr7_1:7334739-7334758 | Msa1007690:intron | 35.0% | |
| CATCCCACTTATCAATTCTT+TGG | + | chr7_1:7334745-7334764 | None:intergenic | 35.0% | |
| ATTGATAAGTGGGATGCTTA+CGG | - | chr7_1:7334749-7334768 | Msa1007690:intron | 35.0% | |
| TCAGAATCCCTTTATCAATC+TGG | + | chr7_1:7334963-7334982 | None:intergenic | 35.0% | |
| CTAATAGAACTCCATAGAGA+AGG | - | chr7_1:7335018-7335037 | Msa1007690:intron | 35.0% | |
| TCTTGAAGCTGAGTTTCAAA+AGG | - | chr7_1:7335155-7335174 | Msa1007690:intron | 35.0% | |
| CAAAGCAAGATTTACTCATC+CGG | + | chr7_1:7335384-7335403 | None:intergenic | 35.0% | |
| ! | CTAGGCAAAGCTCATAATTT+TGG | - | chr7_1:7335482-7335501 | Msa1007690:CDS | 35.0% |
| TTTGAAAAGCAACTTGACCA+GGG | + | chr7_1:7335550-7335569 | None:intergenic | 35.0% | |
| !!! | CAAGTTGCTTTTCAAAGAGT+AGG | - | chr7_1:7335554-7335573 | Msa1007690:intron | 35.0% |
| TCATATAGAAACTGGATTCC+TGG | - | chr7_1:7335783-7335802 | Msa1007690:intron | 35.0% | |
| AAAGAATTGGTACCTACAAC+TGG | - | chr7_1:7335968-7335987 | Msa1007690:CDS | 35.0% | |
| TGTACTCAAGTTTGAACTTC+AGG | - | chr7_1:7336038-7336057 | Msa1007690:CDS | 35.0% | |
| TGCAAAGATAATCTCTGCTG+TGG | - | chr7_1:7334186-7334205 | Msa1007690:CDS | 40.0% | |
| CAGTAAACGTATAGGACATC+TGG | - | chr7_1:7334219-7334238 | Msa1007690:CDS | 40.0% | |
| GCGTCCAACAATATATTCTC+AGG | + | chr7_1:7334253-7334272 | None:intergenic | 40.0% | |
| ATGTACGCATGATTTCGCAT+AGG | + | chr7_1:7334306-7334325 | None:intergenic | 40.0% | |
| !!! | TCTTTTTTGCAGGTTGTCAC+AGG | - | chr7_1:7334460-7334479 | Msa1007690:intron | 40.0% |
| ! | CTATGTCAACAAGCTCCTTT+TGG | - | chr7_1:7334544-7334563 | Msa1007690:intron | 40.0% |
| TAGTTCGATGATCTCGGAAA+CGG | + | chr7_1:7334584-7334603 | None:intergenic | 40.0% | |
| CGAGATCATCGAACTAGTAA+AGG | - | chr7_1:7334588-7334607 | Msa1007690:intron | 40.0% | |
| GCACCAGAAGATAGATAACT+AGG | + | chr7_1:7334723-7334742 | None:intergenic | 40.0% | |
| GGTGCCAAAGAATTGATAAG+TGG | - | chr7_1:7334738-7334757 | Msa1007690:intron | 40.0% | |
| !! | CGGACATTAAAAAGCATCCT+TGG | - | chr7_1:7334799-7334818 | Msa1007690:intron | 40.0% |
| !! | AAAGCATCCTTGGTTTGCTA+CGG | - | chr7_1:7334809-7334828 | Msa1007690:intron | 40.0% |
| TTCAACAACCACTTTCCTCT+TGG | - | chr7_1:7335123-7335142 | Msa1007690:intron | 40.0% | |
| GACTGCTGCATATTTCACAT+GGG | + | chr7_1:7335328-7335347 | None:intergenic | 40.0% | |
| AGACTGCTGCATATTTCACA+TGG | + | chr7_1:7335329-7335348 | None:intergenic | 40.0% | |
| ! | GTTTTACGATATGACTGCTC+AGG | - | chr7_1:7335504-7335523 | Msa1007690:CDS | 40.0% |
| TTGAAAAGCAACTTGACCAG+GGG | + | chr7_1:7335549-7335568 | None:intergenic | 40.0% | |
| ! | CTTTGAAAAGCAACTTGACC+AGG | + | chr7_1:7335551-7335570 | None:intergenic | 40.0% |
| AAAACTGTACCTGAATCGCA+AGG | + | chr7_1:7335616-7335635 | None:intergenic | 40.0% | |
| ACCTCTTCCATCATGTCTAA+CGG | + | chr7_1:7335913-7335932 | None:intergenic | 40.0% | |
| TGGGAGAATTGCATGTATGT+TGG | - | chr7_1:7335944-7335963 | Msa1007690:CDS | 40.0% | |
| TGCAAAGATAATCTCTGCTG+TGG | - | chr7_1:7334186-7334205 | Msa1007690:CDS | 40.0% | |
| CAGTAAACGTATAGGACATC+TGG | - | chr7_1:7334219-7334238 | Msa1007690:CDS | 40.0% | |
| GCGTCCAACAATATATTCTC+AGG | + | chr7_1:7334253-7334272 | None:intergenic | 40.0% | |
| ATGTACGCATGATTTCGCAT+AGG | + | chr7_1:7334306-7334325 | None:intergenic | 40.0% | |
| !!! | TCTTTTTTGCAGGTTGTCAC+AGG | - | chr7_1:7334460-7334479 | Msa1007690:intron | 40.0% |
| ! | CTATGTCAACAAGCTCCTTT+TGG | - | chr7_1:7334544-7334563 | Msa1007690:intron | 40.0% |
| TAGTTCGATGATCTCGGAAA+CGG | + | chr7_1:7334584-7334603 | None:intergenic | 40.0% | |
| CGAGATCATCGAACTAGTAA+AGG | - | chr7_1:7334588-7334607 | Msa1007690:intron | 40.0% | |
| GCACCAGAAGATAGATAACT+AGG | + | chr7_1:7334723-7334742 | None:intergenic | 40.0% | |
| GGTGCCAAAGAATTGATAAG+TGG | - | chr7_1:7334738-7334757 | Msa1007690:intron | 40.0% | |
| !! | CGGACATTAAAAAGCATCCT+TGG | - | chr7_1:7334799-7334818 | Msa1007690:intron | 40.0% |
| !! | AAAGCATCCTTGGTTTGCTA+CGG | - | chr7_1:7334809-7334828 | Msa1007690:intron | 40.0% |
| TTCAACAACCACTTTCCTCT+TGG | - | chr7_1:7335123-7335142 | Msa1007690:intron | 40.0% | |
| GACTGCTGCATATTTCACAT+GGG | + | chr7_1:7335328-7335347 | None:intergenic | 40.0% | |
| AGACTGCTGCATATTTCACA+TGG | + | chr7_1:7335329-7335348 | None:intergenic | 40.0% | |
| ! | GTTTTACGATATGACTGCTC+AGG | - | chr7_1:7335504-7335523 | Msa1007690:CDS | 40.0% |
| TTGAAAAGCAACTTGACCAG+GGG | + | chr7_1:7335549-7335568 | None:intergenic | 40.0% | |
| ! | CTTTGAAAAGCAACTTGACC+AGG | + | chr7_1:7335551-7335570 | None:intergenic | 40.0% |
| AAAACTGTACCTGAATCGCA+AGG | + | chr7_1:7335616-7335635 | None:intergenic | 40.0% | |
| ACCTCTTCCATCATGTCTAA+CGG | + | chr7_1:7335913-7335932 | None:intergenic | 40.0% | |
| TGGGAGAATTGCATGTATGT+TGG | - | chr7_1:7335944-7335963 | Msa1007690:CDS | 40.0% | |
| GTCACAGGAAAACTGTATGC+CGG | - | chr7_1:7334475-7334494 | Msa1007690:intron | 45.0% | |
| CTAAACACCTACTTCAGGTC+CGG | + | chr7_1:7334497-7334516 | None:intergenic | 45.0% | |
| !! | CAGCTCTAAACACCTACTTC+AGG | + | chr7_1:7334502-7334521 | None:intergenic | 45.0% |
| ! | GAAGTAGGTGTTTAGAGCTG+TGG | - | chr7_1:7334502-7334521 | Msa1007690:intron | 45.0% |
| ACAGCCAAATAGACTTCGAC+AGG | - | chr7_1:7334859-7334878 | Msa1007690:intron | 45.0% | |
| CAGCCAAATAGACTTCGACA+GGG | - | chr7_1:7334860-7334879 | Msa1007690:intron | 45.0% | |
| TCAAGATCGTCTTTGCCAAG+AGG | + | chr7_1:7335141-7335160 | None:intergenic | 45.0% | |
| AGCTGAGTTTCAAAAGGCAG+TGG | - | chr7_1:7335161-7335180 | Msa1007690:intron | 45.0% | |
| TGAGTTTCAAAAGGCAGTGG+TGG | - | chr7_1:7335164-7335183 | Msa1007690:intron | 45.0% | |
| GAGTTTCAAAAGGCAGTGGT+GGG | - | chr7_1:7335165-7335184 | Msa1007690:intron | 45.0% | |
| GATATGACTGCTCAGGATTC+TGG | - | chr7_1:7335511-7335530 | Msa1007690:intron | 45.0% | |
| ! | CTTTTCAAAGAGTAGGACCG+AGG | - | chr7_1:7335561-7335580 | Msa1007690:intron | 45.0% |
| TCAACTGTGAAACGTTGCCT+CGG | + | chr7_1:7335581-7335600 | None:intergenic | 45.0% | |
| AGGCAACGTTTCACAGTTGA+GGG | - | chr7_1:7335581-7335600 | Msa1007690:intron | 45.0% | |
| GTTTCACAGTTGAGGGAAAG+TGG | - | chr7_1:7335588-7335607 | Msa1007690:intron | 45.0% | |
| AAAGTGGTTCCTTGCGATTC+AGG | - | chr7_1:7335604-7335623 | Msa1007690:intron | 45.0% | |
| ATAAGCTTGGTCACCAAGAC+AGG | + | chr7_1:7335696-7335715 | None:intergenic | 45.0% | |
| ! | GTCTTGGTGACCAAGCTTAT+TGG | - | chr7_1:7335696-7335715 | Msa1007690:intron | 45.0% |
| ! | AGCTTGGTAGCCAATAAGCT+TGG | + | chr7_1:7335709-7335728 | None:intergenic | 45.0% |
| CGATTATGTCATCAACAGCC+AGG | + | chr7_1:7335804-7335823 | None:intergenic | 45.0% | |
| TCTTCCATCATGTCTAACGG+AGG | + | chr7_1:7335910-7335929 | None:intergenic | 45.0% | |
| ! | TCCGTTAGACATGATGGAAG+AGG | - | chr7_1:7335909-7335928 | Msa1007690:CDS | 45.0% |
| AGACAGGAGGTTAGCAATCT+TGG | - | chr7_1:7335997-7336016 | Msa1007690:CDS | 45.0% | |
| ! | GTTAGCAATCTTGGTGACCA+CGG | - | chr7_1:7336006-7336025 | Msa1007690:CDS | 45.0% |
| GTCACAGGAAAACTGTATGC+CGG | - | chr7_1:7334475-7334494 | Msa1007690:intron | 45.0% | |
| CTAAACACCTACTTCAGGTC+CGG | + | chr7_1:7334497-7334516 | None:intergenic | 45.0% | |
| !! | CAGCTCTAAACACCTACTTC+AGG | + | chr7_1:7334502-7334521 | None:intergenic | 45.0% |
| ! | GAAGTAGGTGTTTAGAGCTG+TGG | - | chr7_1:7334502-7334521 | Msa1007690:intron | 45.0% |
| ACAGCCAAATAGACTTCGAC+AGG | - | chr7_1:7334859-7334878 | Msa1007690:intron | 45.0% | |
| CAGCCAAATAGACTTCGACA+GGG | - | chr7_1:7334860-7334879 | Msa1007690:intron | 45.0% | |
| TCAAGATCGTCTTTGCCAAG+AGG | + | chr7_1:7335141-7335160 | None:intergenic | 45.0% | |
| AGCTGAGTTTCAAAAGGCAG+TGG | - | chr7_1:7335161-7335180 | Msa1007690:intron | 45.0% | |
| TGAGTTTCAAAAGGCAGTGG+TGG | - | chr7_1:7335164-7335183 | Msa1007690:intron | 45.0% | |
| GAGTTTCAAAAGGCAGTGGT+GGG | - | chr7_1:7335165-7335184 | Msa1007690:intron | 45.0% | |
| GATATGACTGCTCAGGATTC+TGG | - | chr7_1:7335511-7335530 | Msa1007690:intron | 45.0% | |
| ! | CTTTTCAAAGAGTAGGACCG+AGG | - | chr7_1:7335561-7335580 | Msa1007690:intron | 45.0% |
| TCAACTGTGAAACGTTGCCT+CGG | + | chr7_1:7335581-7335600 | None:intergenic | 45.0% | |
| AGGCAACGTTTCACAGTTGA+GGG | - | chr7_1:7335581-7335600 | Msa1007690:intron | 45.0% | |
| GTTTCACAGTTGAGGGAAAG+TGG | - | chr7_1:7335588-7335607 | Msa1007690:intron | 45.0% | |
| AAAGTGGTTCCTTGCGATTC+AGG | - | chr7_1:7335604-7335623 | Msa1007690:intron | 45.0% | |
| ATAAGCTTGGTCACCAAGAC+AGG | + | chr7_1:7335696-7335715 | None:intergenic | 45.0% | |
| ! | GTCTTGGTGACCAAGCTTAT+TGG | - | chr7_1:7335696-7335715 | Msa1007690:intron | 45.0% |
| ! | AGCTTGGTAGCCAATAAGCT+TGG | + | chr7_1:7335709-7335728 | None:intergenic | 45.0% |
| CGATTATGTCATCAACAGCC+AGG | + | chr7_1:7335804-7335823 | None:intergenic | 45.0% | |
| TCTTCCATCATGTCTAACGG+AGG | + | chr7_1:7335910-7335929 | None:intergenic | 45.0% | |
| ! | TCCGTTAGACATGATGGAAG+AGG | - | chr7_1:7335909-7335928 | Msa1007690:CDS | 45.0% |
| AGACAGGAGGTTAGCAATCT+TGG | - | chr7_1:7335997-7336016 | Msa1007690:CDS | 45.0% | |
| ! | GTTAGCAATCTTGGTGACCA+CGG | - | chr7_1:7336006-7336025 | Msa1007690:CDS | 45.0% |
| !! | GCTCCTTTTGGAGATCACGA+TGG | - | chr7_1:7334556-7334575 | Msa1007690:intron | 50.0% |
| GTGCCATCGTGATCTCCAAA+AGG | + | chr7_1:7334562-7334581 | None:intergenic | 50.0% | |
| GATAAGTGGGATGCTTACGG+TGG | - | chr7_1:7334752-7334771 | Msa1007690:intron | 50.0% | |
| TACGGACCTTCCTCGTTACT+TGG | - | chr7_1:7334827-7334846 | Msa1007690:intron | 50.0% | |
| GACCTTCCTCGTTACTTGGT+GGG | - | chr7_1:7334831-7334850 | Msa1007690:intron | 50.0% | |
| TACTTGCCCACCAAGTAACG+AGG | + | chr7_1:7334840-7334859 | None:intergenic | 50.0% | |
| CGTCTTGTCTCCCTTCTCTA+TGG | + | chr7_1:7335032-7335051 | None:intergenic | 50.0% | |
| TAGAGAAGGGAGACAAGACG+AGG | - | chr7_1:7335032-7335051 | Msa1007690:intron | 50.0% | |
| CATACAGTAGCAATCTGGGC+AGG | + | chr7_1:7335090-7335109 | None:intergenic | 50.0% | |
| CGTCTTTGCCAAGAGGAAAG+TGG | + | chr7_1:7335134-7335153 | None:intergenic | 50.0% | |
| AGCAACTTGACCAGGGGATA+CGG | + | chr7_1:7335543-7335562 | None:intergenic | 50.0% | |
| GAGGCAACGTTTCACAGTTG+AGG | - | chr7_1:7335580-7335599 | Msa1007690:intron | 50.0% | |
| TGCTCCTCCGTTAGACATGA+TGG | - | chr7_1:7335903-7335922 | Msa1007690:CDS | 50.0% | |
| GAAGAGGTCTTCAGAGCTCT+GGG | - | chr7_1:7335925-7335944 | Msa1007690:CDS | 50.0% | |
| !! | CTGTCTAGCTCTCCAGTTGT+AGG | + | chr7_1:7335983-7336002 | None:intergenic | 50.0% |
| CTACAACTGGAGAGCTAGAC+AGG | - | chr7_1:7335981-7336000 | Msa1007690:CDS | 50.0% | |
| !! | GCTCCTTTTGGAGATCACGA+TGG | - | chr7_1:7334556-7334575 | Msa1007690:intron | 50.0% |
| GTGCCATCGTGATCTCCAAA+AGG | + | chr7_1:7334562-7334581 | None:intergenic | 50.0% | |
| GATAAGTGGGATGCTTACGG+TGG | - | chr7_1:7334752-7334771 | Msa1007690:intron | 50.0% | |
| TACGGACCTTCCTCGTTACT+TGG | - | chr7_1:7334827-7334846 | Msa1007690:intron | 50.0% | |
| GACCTTCCTCGTTACTTGGT+GGG | - | chr7_1:7334831-7334850 | Msa1007690:intron | 50.0% | |
| TACTTGCCCACCAAGTAACG+AGG | + | chr7_1:7334840-7334859 | None:intergenic | 50.0% | |
| CGTCTTGTCTCCCTTCTCTA+TGG | + | chr7_1:7335032-7335051 | None:intergenic | 50.0% | |
| TAGAGAAGGGAGACAAGACG+AGG | - | chr7_1:7335032-7335051 | Msa1007690:intron | 50.0% | |
| CATACAGTAGCAATCTGGGC+AGG | + | chr7_1:7335090-7335109 | None:intergenic | 50.0% | |
| CGTCTTTGCCAAGAGGAAAG+TGG | + | chr7_1:7335134-7335153 | None:intergenic | 50.0% | |
| AGCAACTTGACCAGGGGATA+CGG | + | chr7_1:7335543-7335562 | None:intergenic | 50.0% | |
| GAGGCAACGTTTCACAGTTG+AGG | - | chr7_1:7335580-7335599 | Msa1007690:intron | 50.0% | |
| TGCTCCTCCGTTAGACATGA+TGG | - | chr7_1:7335903-7335922 | Msa1007690:CDS | 50.0% | |
| GAAGAGGTCTTCAGAGCTCT+GGG | - | chr7_1:7335925-7335944 | Msa1007690:CDS | 50.0% | |
| !! | CTGTCTAGCTCTCCAGTTGT+AGG | + | chr7_1:7335983-7336002 | None:intergenic | 50.0% |
| CTACAACTGGAGAGCTAGAC+AGG | - | chr7_1:7335981-7336000 | Msa1007690:CDS | 50.0% | |
| CTGTATGCCGGACCTGAAGT+AGG | - | chr7_1:7334487-7334506 | Msa1007690:intron | 55.0% | |
| GGAAGGTCCGTAGCAAACCA+AGG | + | chr7_1:7334819-7334838 | None:intergenic | 55.0% | |
| GGACCTTCCTCGTTACTTGG+TGG | - | chr7_1:7334830-7334849 | Msa1007690:intron | 55.0% | |
| TGCCCACCAAGTAACGAGGA+AGG | + | chr7_1:7334836-7334855 | None:intergenic | 55.0% | |
| CGGCCCTGTCGAAGTCTATT+TGG | + | chr7_1:7334866-7334885 | None:intergenic | 55.0% | |
| ! | TTCGACAGGGCCGTGAGTTT+TGG | - | chr7_1:7334873-7334892 | Msa1007690:intron | 55.0% |
| ! | CTGGTTTGAACCGTATCCCC+TGG | - | chr7_1:7335530-7335549 | Msa1007690:intron | 55.0% |
| GGAAGAGGTCTTCAGAGCTC+TGG | - | chr7_1:7335924-7335943 | Msa1007690:CDS | 55.0% | |
| CAACTGGAGAGCTAGACAGG+AGG | - | chr7_1:7335984-7336003 | Msa1007690:CDS | 55.0% | |
| ! | AGCAATCTTGGTGACCACGG+CGG | - | chr7_1:7336009-7336028 | Msa1007690:CDS | 55.0% |
| TGAGTACAACCATTCCGCCG+TGG | + | chr7_1:7336026-7336045 | None:intergenic | 55.0% | |
| CTGTATGCCGGACCTGAAGT+AGG | - | chr7_1:7334487-7334506 | Msa1007690:intron | 55.0% | |
| GGAAGGTCCGTAGCAAACCA+AGG | + | chr7_1:7334819-7334838 | None:intergenic | 55.0% | |
| GGACCTTCCTCGTTACTTGG+TGG | - | chr7_1:7334830-7334849 | Msa1007690:intron | 55.0% | |
| TGCCCACCAAGTAACGAGGA+AGG | + | chr7_1:7334836-7334855 | None:intergenic | 55.0% | |
| CGGCCCTGTCGAAGTCTATT+TGG | + | chr7_1:7334866-7334885 | None:intergenic | 55.0% | |
| ! | TTCGACAGGGCCGTGAGTTT+TGG | - | chr7_1:7334873-7334892 | Msa1007690:intron | 55.0% |
| ! | CTGGTTTGAACCGTATCCCC+TGG | - | chr7_1:7335530-7335549 | Msa1007690:intron | 55.0% |
| GGAAGAGGTCTTCAGAGCTC+TGG | - | chr7_1:7335924-7335943 | Msa1007690:CDS | 55.0% | |
| CAACTGGAGAGCTAGACAGG+AGG | - | chr7_1:7335984-7336003 | Msa1007690:CDS | 55.0% | |
| ! | AGCAATCTTGGTGACCACGG+CGG | - | chr7_1:7336009-7336028 | Msa1007690:CDS | 55.0% |
| TGAGTACAACCATTCCGCCG+TGG | + | chr7_1:7336026-7336045 | None:intergenic | 55.0% | |
| CAGTAGCAATCTGGGCAGGC+AGG | + | chr7_1:7335086-7335105 | None:intergenic | 60.0% | |
| ! | TCTTGGTGACCACGGCGGAA+TGG | - | chr7_1:7336014-7336033 | Msa1007690:CDS | 60.0% |
| CAGTAGCAATCTGGGCAGGC+AGG | + | chr7_1:7335086-7335105 | None:intergenic | 60.0% | |
| ! | TCTTGGTGACCACGGCGGAA+TGG | - | chr7_1:7336014-7336033 | Msa1007690:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 7334142 | 7336089 | 7334142 | ID=Msa1007690;Name=Msa1007690 |
| chr7_1 | mRNA | 7334142 | 7336089 | 7334142 | ID=Msa1007690-mRNA-1;Parent=Msa1007690;Name=Msa1007690-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|1|1|5|0|228 |
| chr7_1 | exon | 7335901 | 7336089 | 7335901 | ID=Msa1007690-mRNA-1:exon:2226;Parent=Msa1007690-mRNA-1 |
| chr7_1 | exon | 7335727 | 7335759 | 7335727 | ID=Msa1007690-mRNA-1:exon:2225;Parent=Msa1007690-mRNA-1 |
| chr7_1 | exon | 7335347 | 7335529 | 7335347 | ID=Msa1007690-mRNA-1:exon:2224;Parent=Msa1007690-mRNA-1 |
| chr7_1 | exon | 7335178 | 7335267 | 7335178 | ID=Msa1007690-mRNA-1:exon:2223;Parent=Msa1007690-mRNA-1 |
| chr7_1 | exon | 7334142 | 7334333 | 7334142 | ID=Msa1007690-mRNA-1:exon:2222;Parent=Msa1007690-mRNA-1 |
| chr7_1 | CDS | 7335901 | 7336089 | 7335901 | ID=Msa1007690-mRNA-1:cds;Parent=Msa1007690-mRNA-1 |
| chr7_1 | CDS | 7335727 | 7335759 | 7335727 | ID=Msa1007690-mRNA-1:cds;Parent=Msa1007690-mRNA-1 |
| chr7_1 | CDS | 7335347 | 7335529 | 7335347 | ID=Msa1007690-mRNA-1:cds;Parent=Msa1007690-mRNA-1 |
| chr7_1 | CDS | 7335178 | 7335267 | 7335178 | ID=Msa1007690-mRNA-1:cds;Parent=Msa1007690-mRNA-1 |
| chr7_1 | CDS | 7334142 | 7334333 | 7334142 | ID=Msa1007690-mRNA-1:cds;Parent=Msa1007690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
