Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1008570 | XP_024626129.1 | 68.539 | 89 | 28 | 0 | 2 | 90 | 174 | 262 | 1.24e-30 | 121 |
| Msa1008570 | XP_024626129.1 | 76.842 | 95 | 22 | 0 | 12 | 106 | 98 | 192 | 3.26e-38 | 140 |
| Msa1008570 | XP_024626129.1 | 78.302 | 106 | 23 | 0 | 1 | 106 | 1 | 106 | 1.27e-42 | 152 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1008570 | A0A396GZV2 | 68.539 | 89 | 28 | 0 | 2 | 90 | 174 | 262 | 5.93e-31 | 121 |
| Msa1008570 | A0A396GZV2 | 76.842 | 95 | 22 | 0 | 12 | 106 | 98 | 192 | 1.56e-38 | 140 |
| Msa1008570 | A0A396GZV2 | 78.302 | 106 | 23 | 0 | 1 | 106 | 1 | 106 | 6.04e-43 | 152 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1008570 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1008570 | MtrunA17_Chr7g0218891 | 78.302 | 106 | 23 | 0 | 1 | 106 | 1 | 106 | 1.16e-46 | 152 |
| Msa1008570 | MtrunA17_Chr7g0218891 | 76.842 | 95 | 22 | 0 | 12 | 106 | 98 | 192 | 3.00e-42 | 140 |
| Msa1008570 | MtrunA17_Chr7g0218891 | 68.539 | 89 | 28 | 0 | 2 | 90 | 174 | 262 | 1.14e-34 | 121 |
| Msa1008570 | MtrunA17_Chr1g0205801 | 44.444 | 81 | 42 | 2 | 11 | 90 | 10 | 88 | 2.09e-12 | 59.7 |
| Msa1008570 | MtrunA17_Chr8g0364231 | 46.154 | 65 | 35 | 0 | 29 | 93 | 56 | 120 | 9.77e-12 | 61.2 |
| Msa1008570 | MtrunA17_Chr5g0415031 | 46.774 | 62 | 33 | 0 | 29 | 90 | 57 | 118 | 4.75e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1008570 | AT1G24190.2 | 38.636 | 88 | 52 | 1 | 3 | 90 | 4 | 89 | 2.16e-11 | 60.8 |
| Msa1008570 | AT1G24190.3 | 38.636 | 88 | 52 | 1 | 3 | 90 | 4 | 89 | 2.20e-11 | 60.8 |
| Msa1008570 | AT1G24190.1 | 38.636 | 88 | 52 | 1 | 3 | 90 | 4 | 89 | 2.22e-11 | 60.8 |
| Msa1008570 | AT1G70060.2 | 37.500 | 88 | 53 | 1 | 3 | 90 | 4 | 89 | 4.71e-11 | 59.7 |
| Msa1008570 | AT1G70060.1 | 37.500 | 88 | 53 | 1 | 3 | 90 | 4 | 89 | 4.71e-11 | 59.7 |
Find 31 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGATTTATTCAAGTTAAC+AGG | 0.306329 | 7_1:-9034962 | Msa1008570:CDS |
| AGAACATTGTGACGTCAAAA+AGG | 0.380889 | 7_1:-9035012 | Msa1008570:CDS |
| ATCTGAGGAGGAACAATCTC+TGG | 0.416325 | 7_1:-9034669 | Msa1008570:CDS |
| GCTAACTTCAATTGTCTACT+TGG | 0.423205 | 7_1:+9033969 | None:intergenic |
| AAGGGATTATTTGAAGGTCA+TGG | 0.456386 | 7_1:-9034749 | Msa1008570:CDS |
| ATCCTTTGATGCATTGATGA+AGG | 0.461664 | 7_1:-9034023 | Msa1008570:CDS |
| TGCATCAAAGGATTGCCATC+TGG | 0.478971 | 7_1:+9034033 | None:intergenic |
| ACTTCAATTGTCTACTTGGA+AGG | 0.486961 | 7_1:+9033973 | None:intergenic |
| AGCTTGATTTCAAATCCATC+AGG | 0.489510 | 7_1:+9034695 | None:intergenic |
| AAATCTCAGTAAATTCTTGA+AGG | 0.490603 | 7_1:-9034768 | Msa1008570:CDS |
| TTCTTGAAGGGATTATTTGA+AGG | 0.491097 | 7_1:-9034755 | Msa1008570:CDS |
| ATTGTCTACTTGGAAGGGAA+TGG | 0.494288 | 7_1:+9033979 | None:intergenic |
| AACTTCATTGACGAACTCCT+TGG | 0.507296 | 7_1:+9034989 | None:intergenic |
| TTGAACTACTTCATGCCTGA+TGG | 0.515459 | 7_1:-9034710 | Msa1008570:CDS |
| AATCTCAGTAAATTCTTGAA+GGG | 0.520509 | 7_1:-9034767 | Msa1008570:CDS |
| AAGGGACAATATCTACCCTA+TGG | 0.523510 | 7_1:-9034004 | Msa1008570:CDS |
| TTGGAAGGGAATGGATCCAT+AGG | 0.524135 | 7_1:+9033988 | None:intergenic |
| CTTCAATTGTCTACTTGGAA+GGG | 0.537149 | 7_1:+9033974 | None:intergenic |
| ATTGCCATCTGGAGAGAGGA+TGG | 0.548537 | 7_1:+9034044 | None:intergenic |
| TCCTTTGATGCATTGATGAA+GGG | 0.554862 | 7_1:-9034022 | Msa1008570:CDS |
| TCCCTTCATCAATGCATCAA+AGG | 0.562349 | 7_1:+9034021 | None:intergenic |
| TGATGCATTACAAGAAACAA+AGG | 0.583155 | 7_1:-9034908 | Msa1008570:intron |
| TGAAATCAAGCTTCTATCTG+AGG | 0.589635 | 7_1:-9034684 | Msa1008570:CDS |
| GATTTATTCAAGTTAACAGG+AGG | 0.594070 | 7_1:-9034959 | Msa1008570:CDS |
| TGGAAGGGAATGGATCCATA+GGG | 0.599599 | 7_1:+9033989 | None:intergenic |
| TAAACCATCCTCTCTCCAGA+TGG | 0.604721 | 7_1:-9034048 | Msa1008570:CDS |
| GGGCAACCCGTGATAATGGA+AGG | 0.616033 | 7_1:-9035044 | None:intergenic |
| ATTTATTCAAGTTAACAGGA+GGG | 0.617938 | 7_1:-9034958 | Msa1008570:CDS |
| AAGGATTGCCATCTGGAGAG+AGG | 0.624231 | 7_1:+9034040 | None:intergenic |
| AATCAAGCTTCTATCTGAGG+AGG | 0.631110 | 7_1:-9034681 | Msa1008570:CDS |
| TGGTTTAGTCGAAAACGTTG+AGG | 0.659672 | 7_1:+9034064 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATTACAATAAAAAAAATAG+TGG | + | chr7_1:9034138-9034157 | None:intergenic | 15.0% |
| !! | CATTACAATAAAAAAAATAG+TGG | + | chr7_1:9034138-9034157 | None:intergenic | 15.0% |
| !!! | ATAGATTTATTCAAGTTAAC+AGG | - | chr7_1:9034043-9034062 | Msa1008570:CDS | 20.0% |
| !!! | AACTAATTTATCTATCCTTT+TGG | - | chr7_1:9034190-9034209 | Msa1008570:intron | 20.0% |
| !!! | ACATAGATACATTTATCTTT+TGG | - | chr7_1:9034721-9034740 | Msa1008570:CDS | 20.0% |
| !!! | CATAGATACATTTATCTTTT+GGG | - | chr7_1:9034722-9034741 | Msa1008570:CDS | 20.0% |
| !!! | ATAGATTTATTCAAGTTAAC+AGG | - | chr7_1:9034043-9034062 | Msa1008570:CDS | 20.0% |
| !!! | AACTAATTTATCTATCCTTT+TGG | - | chr7_1:9034190-9034209 | Msa1008570:intron | 20.0% |
| !!! | ACATAGATACATTTATCTTT+TGG | - | chr7_1:9034721-9034740 | Msa1008570:CDS | 20.0% |
| !!! | CATAGATACATTTATCTTTT+GGG | - | chr7_1:9034722-9034741 | Msa1008570:CDS | 20.0% |
| !! | ATTTATTCAAGTTAACAGGA+GGG | - | chr7_1:9034047-9034066 | Msa1008570:CDS | 25.0% |
| !! | ATCCTTTTGGTATATTTTGT+AGG | - | chr7_1:9034203-9034222 | Msa1008570:intron | 25.0% |
| ! | ATCCTACAAAATATACCAAA+AGG | + | chr7_1:9034208-9034227 | None:intergenic | 25.0% |
| ! | AAATCTCAGTAAATTCTTGA+AGG | - | chr7_1:9034237-9034256 | Msa1008570:intron | 25.0% |
| ! | AATCTCAGTAAATTCTTGAA+GGG | - | chr7_1:9034238-9034257 | Msa1008570:intron | 25.0% |
| ! | TGGATATATTGAGTAAAACA+TGG | - | chr7_1:9034550-9034569 | Msa1008570:intron | 25.0% |
| ! | CAGAATCTATTTAATTGTTG+TGG | + | chr7_1:9034625-9034644 | None:intergenic | 25.0% |
| !! | CTTTGGCTTATTAAAAAACA+AGG | + | chr7_1:9034648-9034667 | None:intergenic | 25.0% |
| !!! | GTTTTTTAATAAGCCAAAGA+TGG | - | chr7_1:9034649-9034668 | Msa1008570:CDS | 25.0% |
| !! | ATTTATTCAAGTTAACAGGA+GGG | - | chr7_1:9034047-9034066 | Msa1008570:CDS | 25.0% |
| !! | ATCCTTTTGGTATATTTTGT+AGG | - | chr7_1:9034203-9034222 | Msa1008570:intron | 25.0% |
| ! | ATCCTACAAAATATACCAAA+AGG | + | chr7_1:9034208-9034227 | None:intergenic | 25.0% |
| ! | AAATCTCAGTAAATTCTTGA+AGG | - | chr7_1:9034237-9034256 | Msa1008570:intron | 25.0% |
| ! | AATCTCAGTAAATTCTTGAA+GGG | - | chr7_1:9034238-9034257 | Msa1008570:intron | 25.0% |
| ! | TGGATATATTGAGTAAAACA+TGG | - | chr7_1:9034550-9034569 | Msa1008570:intron | 25.0% |
| ! | CAGAATCTATTTAATTGTTG+TGG | + | chr7_1:9034625-9034644 | None:intergenic | 25.0% |
| !! | CTTTGGCTTATTAAAAAACA+AGG | + | chr7_1:9034648-9034667 | None:intergenic | 25.0% |
| !!! | GTTTTTTAATAAGCCAAAGA+TGG | - | chr7_1:9034649-9034668 | Msa1008570:CDS | 25.0% |
| ! | GATTTATTCAAGTTAACAGG+AGG | - | chr7_1:9034046-9034065 | Msa1008570:CDS | 30.0% |
| TGATGCATTACAAGAAACAA+AGG | - | chr7_1:9034097-9034116 | Msa1008570:intron | 30.0% | |
| TTCTTGAAGGGATTATTTGA+AGG | - | chr7_1:9034250-9034269 | Msa1008570:intron | 30.0% | |
| ! | GACAAATTCTTTCGCATTTT+TGG | + | chr7_1:9034374-9034393 | None:intergenic | 30.0% |
| CTATGTTATAGTGAACAAAG+TGG | + | chr7_1:9034707-9034726 | None:intergenic | 30.0% | |
| !!! | ACATTTATCTTTTGGGATCT+AGG | - | chr7_1:9034729-9034748 | Msa1008570:CDS | 30.0% |
| !! | TCATATGCTTTTGAAGAATC+TGG | + | chr7_1:9034842-9034861 | None:intergenic | 30.0% |
| ! | GATTTATTCAAGTTAACAGG+AGG | - | chr7_1:9034046-9034065 | Msa1008570:CDS | 30.0% |
| TGATGCATTACAAGAAACAA+AGG | - | chr7_1:9034097-9034116 | Msa1008570:intron | 30.0% | |
| TTCTTGAAGGGATTATTTGA+AGG | - | chr7_1:9034250-9034269 | Msa1008570:intron | 30.0% | |
| ! | GACAAATTCTTTCGCATTTT+TGG | + | chr7_1:9034374-9034393 | None:intergenic | 30.0% |
| CTATGTTATAGTGAACAAAG+TGG | + | chr7_1:9034707-9034726 | None:intergenic | 30.0% | |
| !!! | ACATTTATCTTTTGGGATCT+AGG | - | chr7_1:9034729-9034748 | Msa1008570:CDS | 30.0% |
| !! | TCATATGCTTTTGAAGAATC+TGG | + | chr7_1:9034842-9034861 | None:intergenic | 30.0% |
| AGAACATTGTGACGTCAAAA+AGG | - | chr7_1:9033993-9034012 | Msa1008570:CDS | 35.0% | |
| AAGGGATTATTTGAAGGTCA+TGG | - | chr7_1:9034256-9034275 | Msa1008570:intron | 35.0% | |
| AGCTTGATTTCAAATCCATC+AGG | + | chr7_1:9034313-9034332 | None:intergenic | 35.0% | |
| TGAAATCAAGCTTCTATCTG+AGG | - | chr7_1:9034321-9034340 | Msa1008570:intron | 35.0% | |
| GATTTAGTCGATATCGTTCT+TGG | - | chr7_1:9034530-9034549 | Msa1008570:intron | 35.0% | |
| TCATGAGTTCTTATGGGAAA+TGG | + | chr7_1:9034777-9034796 | None:intergenic | 35.0% | |
| TCCTAGTCATGAGTTCTTAT+GGG | + | chr7_1:9034783-9034802 | None:intergenic | 35.0% | |
| ATCCTAGTCATGAGTTCTTA+TGG | + | chr7_1:9034784-9034803 | None:intergenic | 35.0% | |
| ATAAGAACTCATGACTAGGA+TGG | - | chr7_1:9034783-9034802 | Msa1008570:CDS | 35.0% | |
| ACCAGAAACATGTTTATGTG+AGG | + | chr7_1:9034811-9034830 | None:intergenic | 35.0% | |
| !! | TCACATAAACATGTTTCTGG+TGG | - | chr7_1:9034810-9034829 | Msa1008570:intron | 35.0% |
| !! | CACATAAACATGTTTCTGGT+GGG | - | chr7_1:9034811-9034830 | Msa1008570:intron | 35.0% |
| AAAGTCCTTCGACAAGAATT+TGG | + | chr7_1:9034876-9034895 | None:intergenic | 35.0% | |
| ! | ATTCTTGTCGAAGGACTTTT+TGG | - | chr7_1:9034877-9034896 | Msa1008570:intron | 35.0% |
| ! | TCAGCCATATGAAGTATCTT+TGG | - | chr7_1:9034914-9034933 | Msa1008570:CDS | 35.0% |
| CTGACCAAAGATACTTCATA+TGG | + | chr7_1:9034921-9034940 | None:intergenic | 35.0% | |
| ! | ATCCTTTGATGCATTGATGA+AGG | - | chr7_1:9034982-9035001 | Msa1008570:CDS | 35.0% |
| ! | TCCTTTGATGCATTGATGAA+GGG | - | chr7_1:9034983-9035002 | Msa1008570:CDS | 35.0% |
| AGAACATTGTGACGTCAAAA+AGG | - | chr7_1:9033993-9034012 | Msa1008570:CDS | 35.0% | |
| AAGGGATTATTTGAAGGTCA+TGG | - | chr7_1:9034256-9034275 | Msa1008570:intron | 35.0% | |
| AGCTTGATTTCAAATCCATC+AGG | + | chr7_1:9034313-9034332 | None:intergenic | 35.0% | |
| TGAAATCAAGCTTCTATCTG+AGG | - | chr7_1:9034321-9034340 | Msa1008570:intron | 35.0% | |
| GATTTAGTCGATATCGTTCT+TGG | - | chr7_1:9034530-9034549 | Msa1008570:intron | 35.0% | |
| TCATGAGTTCTTATGGGAAA+TGG | + | chr7_1:9034777-9034796 | None:intergenic | 35.0% | |
| TCCTAGTCATGAGTTCTTAT+GGG | + | chr7_1:9034783-9034802 | None:intergenic | 35.0% | |
| ATCCTAGTCATGAGTTCTTA+TGG | + | chr7_1:9034784-9034803 | None:intergenic | 35.0% | |
| ATAAGAACTCATGACTAGGA+TGG | - | chr7_1:9034783-9034802 | Msa1008570:CDS | 35.0% | |
| ACCAGAAACATGTTTATGTG+AGG | + | chr7_1:9034811-9034830 | None:intergenic | 35.0% | |
| !! | TCACATAAACATGTTTCTGG+TGG | - | chr7_1:9034810-9034829 | Msa1008570:intron | 35.0% |
| !! | CACATAAACATGTTTCTGGT+GGG | - | chr7_1:9034811-9034830 | Msa1008570:intron | 35.0% |
| AAAGTCCTTCGACAAGAATT+TGG | + | chr7_1:9034876-9034895 | None:intergenic | 35.0% | |
| ! | ATTCTTGTCGAAGGACTTTT+TGG | - | chr7_1:9034877-9034896 | Msa1008570:intron | 35.0% |
| ! | TCAGCCATATGAAGTATCTT+TGG | - | chr7_1:9034914-9034933 | Msa1008570:CDS | 35.0% |
| CTGACCAAAGATACTTCATA+TGG | + | chr7_1:9034921-9034940 | None:intergenic | 35.0% | |
| ! | ATCCTTTGATGCATTGATGA+AGG | - | chr7_1:9034982-9035001 | Msa1008570:CDS | 35.0% |
| ! | TCCTTTGATGCATTGATGAA+GGG | - | chr7_1:9034983-9035002 | Msa1008570:CDS | 35.0% |
| AACTTCATTGACGAACTCCT+TGG | + | chr7_1:9034019-9034038 | None:intergenic | 40.0% | |
| TTGAACTACTTCATGCCTGA+TGG | - | chr7_1:9034295-9034314 | Msa1008570:intron | 40.0% | |
| AATCAAGCTTCTATCTGAGG+AGG | - | chr7_1:9034324-9034343 | Msa1008570:intron | 40.0% | |
| AAGCCAAAGATGGCATTAAG+AGG | - | chr7_1:9034659-9034678 | Msa1008570:CDS | 40.0% | |
| AGCCAAAGATGGCATTAAGA+GGG | - | chr7_1:9034660-9034679 | Msa1008570:CDS | 40.0% | |
| TCCCATAAGAACTCATGACT+AGG | - | chr7_1:9034779-9034798 | Msa1008570:CDS | 40.0% | |
| GCCTCACATAAACATGTTTC+TGG | - | chr7_1:9034807-9034826 | Msa1008570:intron | 40.0% | |
| ATTCGCCAAATTCTTGTCGA+AGG | - | chr7_1:9034868-9034887 | Msa1008570:intron | 40.0% | |
| !!! | CGAAGGACTTTTTGGTTATG+TGG | - | chr7_1:9034885-9034904 | Msa1008570:intron | 40.0% |
| TGGTTTAGTCGAAAACGTTG+AGG | + | chr7_1:9034944-9034963 | None:intergenic | 40.0% | |
| TCCCTTCATCAATGCATCAA+AGG | + | chr7_1:9034987-9035006 | None:intergenic | 40.0% | |
| AAGGGACAATATCTACCCTA+TGG | - | chr7_1:9035001-9035020 | Msa1008570:CDS | 40.0% | |
| ATTGTCTACTTGGAAGGGAA+TGG | + | chr7_1:9035029-9035048 | None:intergenic | 40.0% | |
| AACTTCATTGACGAACTCCT+TGG | + | chr7_1:9034019-9034038 | None:intergenic | 40.0% | |
| TTGAACTACTTCATGCCTGA+TGG | - | chr7_1:9034295-9034314 | Msa1008570:intron | 40.0% | |
| AATCAAGCTTCTATCTGAGG+AGG | - | chr7_1:9034324-9034343 | Msa1008570:intron | 40.0% | |
| AAGCCAAAGATGGCATTAAG+AGG | - | chr7_1:9034659-9034678 | Msa1008570:CDS | 40.0% | |
| AGCCAAAGATGGCATTAAGA+GGG | - | chr7_1:9034660-9034679 | Msa1008570:CDS | 40.0% | |
| TCCCATAAGAACTCATGACT+AGG | - | chr7_1:9034779-9034798 | Msa1008570:CDS | 40.0% | |
| GCCTCACATAAACATGTTTC+TGG | - | chr7_1:9034807-9034826 | Msa1008570:intron | 40.0% | |
| ATTCGCCAAATTCTTGTCGA+AGG | - | chr7_1:9034868-9034887 | Msa1008570:intron | 40.0% | |
| !!! | CGAAGGACTTTTTGGTTATG+TGG | - | chr7_1:9034885-9034904 | Msa1008570:intron | 40.0% |
| TGGTTTAGTCGAAAACGTTG+AGG | + | chr7_1:9034944-9034963 | None:intergenic | 40.0% | |
| TCCCTTCATCAATGCATCAA+AGG | + | chr7_1:9034987-9035006 | None:intergenic | 40.0% | |
| AAGGGACAATATCTACCCTA+TGG | - | chr7_1:9035001-9035020 | Msa1008570:CDS | 40.0% | |
| ATTGTCTACTTGGAAGGGAA+TGG | + | chr7_1:9035029-9035048 | None:intergenic | 40.0% | |
| TTGTGACGTCAAAAAGGCCA+AGG | - | chr7_1:9033999-9034018 | Msa1008570:CDS | 45.0% | |
| ATCTGAGGAGGAACAATCTC+TGG | - | chr7_1:9034336-9034355 | Msa1008570:intron | 45.0% | |
| CTCCCTCTTAATGCCATCTT+TGG | + | chr7_1:9034665-9034684 | None:intergenic | 45.0% | |
| TAAACCATCCTCTCTCCAGA+TGG | - | chr7_1:9034957-9034976 | Msa1008570:CDS | 45.0% | |
| TGCATCAAAGGATTGCCATC+TGG | + | chr7_1:9034975-9034994 | None:intergenic | 45.0% | |
| TGGAAGGGAATGGATCCATA+GGG | + | chr7_1:9035019-9035038 | None:intergenic | 45.0% | |
| TTGGAAGGGAATGGATCCAT+AGG | + | chr7_1:9035020-9035039 | None:intergenic | 45.0% | |
| TTGTGACGTCAAAAAGGCCA+AGG | - | chr7_1:9033999-9034018 | Msa1008570:CDS | 45.0% | |
| ATCTGAGGAGGAACAATCTC+TGG | - | chr7_1:9034336-9034355 | Msa1008570:intron | 45.0% | |
| CTCCCTCTTAATGCCATCTT+TGG | + | chr7_1:9034665-9034684 | None:intergenic | 45.0% | |
| TAAACCATCCTCTCTCCAGA+TGG | - | chr7_1:9034957-9034976 | Msa1008570:CDS | 45.0% | |
| TGCATCAAAGGATTGCCATC+TGG | + | chr7_1:9034975-9034994 | None:intergenic | 45.0% | |
| TGGAAGGGAATGGATCCATA+GGG | + | chr7_1:9035019-9035038 | None:intergenic | 45.0% | |
| TTGGAAGGGAATGGATCCAT+AGG | + | chr7_1:9035020-9035039 | None:intergenic | 45.0% | |
| ATTGCCATCTGGAGAGAGGA+TGG | + | chr7_1:9034964-9034983 | None:intergenic | 50.0% | |
| AAGGATTGCCATCTGGAGAG+AGG | + | chr7_1:9034968-9034987 | None:intergenic | 50.0% | |
| ATTGCCATCTGGAGAGAGGA+TGG | + | chr7_1:9034964-9034983 | None:intergenic | 50.0% | |
| AAGGATTGCCATCTGGAGAG+AGG | + | chr7_1:9034968-9034987 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 9033976 | 9035051 | 9033976 | ID=Msa1008570;Name=Msa1008570 |
| chr7_1 | mRNA | 9033976 | 9035051 | 9033976 | ID=Msa1008570-mRNA-1;Parent=Msa1008570;Name=Msa1008570-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0|0.66|1|1|3|0|142 |
| chr7_1 | exon | 9034909 | 9035051 | 9034909 | ID=Msa1008570-mRNA-1:exon:2604;Parent=Msa1008570-mRNA-1 |
| chr7_1 | exon | 9034628 | 9034802 | 9034628 | ID=Msa1008570-mRNA-1:exon:2603;Parent=Msa1008570-mRNA-1 |
| chr7_1 | exon | 9033976 | 9034086 | 9033976 | ID=Msa1008570-mRNA-1:exon:2602;Parent=Msa1008570-mRNA-1 |
| chr7_1 | CDS | 9034909 | 9035051 | 9034909 | ID=Msa1008570-mRNA-1:cds;Parent=Msa1008570-mRNA-1 |
| chr7_1 | CDS | 9034628 | 9034802 | 9034628 | ID=Msa1008570-mRNA-1:cds;Parent=Msa1008570-mRNA-1 |
| chr7_1 | CDS | 9033976 | 9034086 | 9033976 | ID=Msa1008570-mRNA-1:cds;Parent=Msa1008570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
