Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1010920 | XP_003621793.1 | 64.808 | 287 | 43 | 7 | 1 | 233 | 1 | 283 | 3.78e-99 | 311 |
| Msa1010920 | XP_003621793.1 | 80.069 | 291 | 44 | 3 | 227 | 513 | 8 | 288 | 9.26e-147 | 432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1010920 | G7KVP4 | 64.808 | 287 | 43 | 7 | 1 | 233 | 1 | 283 | 1.80e-99 | 311 |
| Msa1010920 | G7KVP4 | 80.069 | 291 | 44 | 3 | 227 | 513 | 8 | 288 | 4.42e-147 | 432 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1010920 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1010920 | MtrunA17_Chr7g0222661 | 80.069 | 291 | 44 | 3 | 227 | 513 | 8 | 288 | 8.52e-151 | 432 |
| Msa1010920 | MtrunA17_Chr7g0222661 | 64.808 | 287 | 43 | 7 | 1 | 233 | 1 | 283 | 3.47e-103 | 311 |
| Msa1010920 | MtrunA17_Chr3g0081141 | 55.627 | 311 | 105 | 10 | 225 | 513 | 6 | 305 | 1.92e-94 | 289 |
| Msa1010920 | MtrunA17_Chr3g0081141 | 47.619 | 294 | 85 | 12 | 1 | 226 | 1 | 293 | 1.47e-59 | 199 |
| Msa1010920 | MtrunA17_Chr7g0222671 | 75.000 | 184 | 23 | 4 | 227 | 409 | 8 | 169 | 4.86e-88 | 268 |
| Msa1010920 | MtrunA17_Chr7g0222671 | 62.712 | 177 | 26 | 3 | 1 | 145 | 1 | 169 | 3.68e-61 | 198 |
| Msa1010920 | MtrunA17_Chr3g0081131 | 53.333 | 300 | 106 | 10 | 232 | 513 | 13 | 296 | 1.71e-85 | 266 |
| Msa1010920 | MtrunA17_Chr3g0081131 | 44.643 | 280 | 95 | 8 | 13 | 233 | 13 | 291 | 1.19e-54 | 185 |
| Msa1010920 | MtrunA17_Chr3g0081121 | 55.000 | 300 | 108 | 8 | 232 | 513 | 13 | 303 | 5.31e-80 | 252 |
| Msa1010920 | MtrunA17_Chr3g0081121 | 45.105 | 286 | 90 | 9 | 1 | 220 | 1 | 285 | 2.96e-48 | 169 |
| Msa1010920 | MtrunA17_Chr3g0079671 | 52.459 | 305 | 110 | 12 | 233 | 513 | 14 | 307 | 9.40e-75 | 238 |
| Msa1010920 | MtrunA17_Chr3g0079671 | 40.559 | 286 | 94 | 10 | 14 | 226 | 14 | 296 | 8.53e-40 | 146 |
| Msa1010920 | MtrunA17_Chr7g0224221 | 44.444 | 342 | 105 | 11 | 225 | 497 | 6 | 331 | 9.68e-70 | 227 |
| Msa1010920 | MtrunA17_Chr7g0224221 | 43.367 | 196 | 70 | 7 | 65 | 222 | 139 | 331 | 2.12e-33 | 130 |
| Msa1010920 | MtrunA17_Chr5g0396031 | 43.939 | 264 | 73 | 12 | 272 | 475 | 14 | 262 | 1.66e-41 | 153 |
| Msa1010920 | MtrunA17_Chr5g0396031 | 43.077 | 130 | 43 | 4 | 60 | 158 | 31 | 160 | 1.81e-19 | 90.5 |
| Msa1010920 | MtrunA17_Chr5g0396031 | 55.039 | 129 | 48 | 7 | 392 | 513 | 262 | 387 | 4.98e-19 | 89.0 |
| Msa1010920 | MtrunA17_Chr7g0224071 | 45.513 | 156 | 69 | 6 | 370 | 513 | 9 | 160 | 6.86e-23 | 95.5 |
| Msa1010920 | MtrunA17_Chr7g0224071 | 40.625 | 128 | 61 | 4 | 113 | 227 | 22 | 147 | 6.88e-14 | 69.7 |
| Msa1010920 | MtrunA17_Chr7g0224061 | 42.857 | 154 | 77 | 4 | 370 | 513 | 9 | 161 | 8.99e-21 | 89.7 |
| Msa1010920 | MtrunA17_Chr7g0224061 | 40.157 | 127 | 64 | 4 | 113 | 227 | 22 | 148 | 5.75e-13 | 67.4 |
| Msa1010920 | MtrunA17_Chr2g0310101 | 41.026 | 78 | 39 | 1 | 292 | 369 | 50 | 120 | 3.42e-12 | 65.9 |
| Msa1010920 | MtrunA17_Chr1g0149811 | 32.787 | 122 | 73 | 3 | 271 | 391 | 71 | 184 | 2.37e-11 | 64.3 |
| Msa1010920 | MtrunA17_Chr7g0255491 | 42.683 | 82 | 33 | 4 | 301 | 376 | 67 | 140 | 7.36e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1010920 | AT5G25160.1 | 43.373 | 83 | 34 | 4 | 299 | 380 | 57 | 127 | 1.70e-11 | 64.7 |
Find 107 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATGCACGTTCTGCTTTA+TGG | 0.134628 | 7_1:+14521285 | None:intergenic |
| TAACTTGAGAAATAATATTA+TGG | 0.179541 | 7_1:-14516779 | Msa1010920:CDS |
| TTACACCTTATAATAATTAT+AGG | 0.207101 | 7_1:-14516930 | Msa1010920:CDS |
| GATGGTGGTGCTTTAGGTTT+AGG | 0.209180 | 7_1:-14516997 | Msa1010920:CDS |
| CCAATGCACGTTCTGCCTTA+TGG | 0.226140 | 7_1:+14517061 | None:intergenic |
| TACACCTTATAATAATTATA+GGG | 0.236520 | 7_1:-14516929 | Msa1010920:CDS |
| CCTTCTGATATTGACTCTTC+TGG | 0.254620 | 7_1:-14516538 | Msa1010920:CDS |
| GTTGGTACAAATAATAAAAT+TGG | 0.276990 | 7_1:-14520966 | Msa1010920:CDS |
| CAATGCACGTTCTGCTTTAT+GGG | 0.289491 | 7_1:+14521286 | None:intergenic |
| GTACTAGAATAATTGAAATA+AGG | 0.289972 | 7_1:+14516958 | None:intergenic |
| ATGGTGGTGCTTTAGGTTTA+GGG | 0.298224 | 7_1:-14516996 | Msa1010920:CDS |
| CAATGCACGTTCTGCCTTAT+GGG | 0.298620 | 7_1:+14517062 | None:intergenic |
| TTCCCTTCATTGCTGTTATT+AGG | 0.299034 | 7_1:+14517180 | None:intergenic |
| GTTGGTACAAATAATCAAAT+TGG | 0.317948 | 7_1:-14516697 | Msa1010920:CDS |
| AGGTATGATGGTGGTGCTTT+AGG | 0.318345 | 7_1:-14517003 | Msa1010920:CDS |
| ACCCCAAATGGTTCTAGATA+TGG | 0.320359 | 7_1:-14521116 | Msa1010920:CDS |
| ATCCCAAATGGTTCTAGATA+TGG | 0.324554 | 7_1:-14516847 | Msa1010920:CDS |
| GATGTTGAACCAACTTGAAT+AGG | 0.324751 | 7_1:+14517210 | None:intergenic |
| AACCATATCTAGAACCATTT+GGG | 0.325250 | 7_1:+14521114 | None:intergenic |
| TAATTATTATAAGGTGTAAA+AGG | 0.335943 | 7_1:+14516934 | None:intergenic |
| TTCCAAAGCGACAGACTTGC+TGG | 0.340733 | 7_1:+14517260 | None:intergenic |
| GGAAGAGATGCTGAAGGATT+TGG | 0.356934 | 7_1:+14521600 | None:intergenic |
| TATAATAATTATAGGGGCCT+TGG | 0.364440 | 7_1:-14516922 | Msa1010920:CDS |
| TCTACTTTACAAGGATTAAG+AGG | 0.366481 | 7_1:-14521320 | Msa1010920:CDS |
| AACTTGAGAAATAATATTAT+GGG | 0.376401 | 7_1:-14516778 | Msa1010920:CDS |
| TTCCAGCAAGTCTGTCGCTT+TGG | 0.380740 | 7_1:-14517262 | Msa1010920:CDS |
| TAACCATATCTAGAACCATT+TGG | 0.384631 | 7_1:+14521113 | None:intergenic |
| TAACCATATCTAGAACCATT+TGG | 0.390792 | 7_1:+14516844 | None:intergenic |
| AGGCCCCTATAATTATTATA+AGG | 0.391284 | 7_1:+14516925 | None:intergenic |
| TTTCCTAATAACAGCAATGA+AGG | 0.394049 | 7_1:-14517183 | Msa1010920:CDS |
| TTTCCTAATAACAGCAATGA+AGG | 0.394049 | 7_1:-14521416 | Msa1010920:intron |
| AATATTATGGGTAGTAATAC+AGG | 0.396083 | 7_1:-14516766 | Msa1010920:CDS |
| AATGTTGAACCAACATCAAC+AGG | 0.401018 | 7_1:+14521443 | None:intergenic |
| TGATATTGACTCTTCTGGAT+TGG | 0.414212 | 7_1:-14516533 | Msa1010920:CDS |
| AACCATATCTAGAACCATTT+GGG | 0.417831 | 7_1:+14516845 | None:intergenic |
| TATAATAGTTATAGGGGCCT+TGG | 0.427649 | 7_1:-14521191 | Msa1010920:intron |
| ATAAACCTAGGGTTAGTATA+AGG | 0.431036 | 7_1:+14516868 | None:intergenic |
| AACCCTAGGGTTACCCCAAA+TGG | 0.442364 | 7_1:-14521128 | Msa1010920:CDS |
| AACCCTAGGTTTATCCCAAA+TGG | 0.444045 | 7_1:-14516859 | Msa1010920:CDS |
| TAGGGGCCTTGGTGTTAGAA+TGG | 0.459014 | 7_1:-14521180 | Msa1010920:CDS |
| GTAACCCTAGGGTTAGTATA+AGG | 0.460616 | 7_1:+14521137 | None:intergenic |
| ATTGGTGCTATTCTAAAACT+TGG | 0.462470 | 7_1:-14516679 | Msa1010920:CDS |
| TAGGGGCCTTGGTGTTAGAA+TGG | 0.466450 | 7_1:-14516911 | Msa1010920:CDS |
| TTTGATGCCCTCCTAAGCCT+TGG | 0.469569 | 7_1:+14517088 | None:intergenic |
| AATGGTTCTAGATATGGTTA+TGG | 0.471531 | 7_1:-14516841 | Msa1010920:CDS |
| AATGGTTCTAGATATGGTTA+TGG | 0.471531 | 7_1:-14521110 | Msa1010920:CDS |
| TCTACTCTCCAAGGCTTAGG+AGG | 0.479090 | 7_1:-14517096 | Msa1010920:CDS |
| GATTCTTCCCACACAAAAGA+AGG | 0.481537 | 7_1:-14521559 | Msa1010920:CDS |
| GAACCATTTGGGGTAACCCT+AGG | 0.482271 | 7_1:+14521125 | None:intergenic |
| GATTCTACCCACACAAAAGA+AGG | 0.483840 | 7_1:-14517327 | Msa1010920:CDS |
| ATGTTGAACCAACTTGAATA+GGG | 0.488992 | 7_1:+14517211 | None:intergenic |
| GGGCAATATTCTACTTTACA+AGG | 0.493513 | 7_1:-14521329 | Msa1010920:CDS |
| GATGGTGGTGCAAGGTATGA+TGG | 0.493913 | 7_1:-14517015 | Msa1010920:CDS |
| AATACAGGAGTTGGAACTCT+AGG | 0.496306 | 7_1:-14516751 | Msa1010920:CDS |
| TTCCAACGAGTCTGTCGGTT+CGG | 0.497329 | 7_1:-14521494 | Msa1010920:CDS |
| ATGGGTAGTAATACAGGAGT+TGG | 0.502250 | 7_1:-14516760 | Msa1010920:CDS |
| TAATTTGAGAAATAATATTG+TGG | 0.503589 | 7_1:-14521048 | Msa1010920:CDS |
| AAACACCTTATACTAACCCT+AGG | 0.508729 | 7_1:-14521142 | Msa1010920:CDS |
| CTACTTTACAAGGATTAAGA+GGG | 0.513161 | 7_1:-14521319 | Msa1010920:CDS |
| AATTTGAGAAATAATATTGT+GGG | 0.513997 | 7_1:-14521047 | Msa1010920:CDS |
| GTTGTTAGCCCTATTCAAGT+TGG | 0.516320 | 7_1:-14517219 | Msa1010920:CDS |
| TAGATTCATCTGCTGCTACA+AGG | 0.517516 | 7_1:-14520926 | Msa1010920:CDS |
| AGGGCATCAAAATGCCCATA+AGG | 0.520640 | 7_1:-14517076 | Msa1010920:CDS |
| TCTTCCACTTCAAAAGATGA+AGG | 0.527679 | 7_1:-14521583 | Msa1010920:CDS |
| GAACCATTTGGGATAAACCT+AGG | 0.527743 | 7_1:+14516856 | None:intergenic |
| CAACGTAAAGAAAGGTATGA+TGG | 0.529751 | 7_1:-14517033 | Msa1010920:CDS |
| AACCATTTGGGGTAACCCTA+GGG | 0.535246 | 7_1:+14521126 | None:intergenic |
| AGTACTTCAAGAATTGAAGT+TGG | 0.539526 | 7_1:-14516715 | Msa1010920:CDS |
| AGTACTTCAAGAATTGAAGT+TGG | 0.539526 | 7_1:-14520984 | Msa1010920:CDS |
| ACACCTTATAATAATTATAG+GGG | 0.545626 | 7_1:-14516928 | Msa1010920:CDS |
| AACCATTTGGGATAAACCTA+GGG | 0.548903 | 7_1:+14516857 | None:intergenic |
| GTTGGAACTCTAGGTATTGG+TGG | 0.551369 | 7_1:-14521011 | Msa1010920:intron |
| TTTACATGTTCGTATTGCAA+GGG | 0.553334 | 7_1:-14517126 | Msa1010920:CDS |
| CTACTCTCCAAGGCTTAGGA+GGG | 0.554995 | 7_1:-14517095 | Msa1010920:CDS |
| TGAAGTGGAAGAGATGCTGA+AGG | 0.559048 | 7_1:+14521594 | None:intergenic |
| CCATAAAGCAGAACGTGCAT+TGG | 0.559919 | 7_1:-14521285 | Msa1010920:CDS |
| AACCACCTTATACTAACCCT+AGG | 0.567577 | 7_1:-14516873 | Msa1010920:CDS |
| CCATAAGGCAGAACGTGCAT+TGG | 0.569036 | 7_1:-14517061 | Msa1010920:CDS |
| TTCCTAATAACAGCAATGAA+GGG | 0.573815 | 7_1:-14517182 | Msa1010920:CDS |
| TTCCTAATAACAGCAATGAA+GGG | 0.573815 | 7_1:-14521415 | Msa1010920:intron |
| TTTGCATGCTCGTATTGCAA+GGG | 0.579641 | 7_1:-14521350 | Msa1010920:CDS |
| ATCACCTTCATCTTGTGAAG+TGG | 0.582439 | 7_1:+14517347 | None:intergenic |
| AAAGGTATGATGGTGGTGCA+AGG | 0.582968 | 7_1:-14517023 | Msa1010920:CDS |
| AAAAGAAGGGGTGAACATGA+AGG | 0.593081 | 7_1:-14521545 | Msa1010920:CDS |
| TTACATGTTCGTATTGCAAG+GGG | 0.594960 | 7_1:-14517125 | Msa1010920:CDS |
| AAAAGAAGGGCTGAGCATGA+AGG | 0.595472 | 7_1:-14517313 | Msa1010920:CDS |
| ATTCTTCCCACACAAAAGAA+GGG | 0.597895 | 7_1:-14521558 | Msa1010920:CDS |
| GCTACAACATCATCTTTCGA+TGG | 0.600779 | 7_1:+14521466 | None:intergenic |
| TTGCATGCTCGTATTGCAAG+GGG | 0.601952 | 7_1:-14521349 | Msa1010920:CDS |
| ACTGCCACTTCACAAGATGA+AGG | 0.602040 | 7_1:-14517351 | Msa1010920:CDS |
| GCTGAAGGATTTGGATGCCA+TGG | 0.606269 | 7_1:+14521609 | None:intergenic |
| AACACCTTATACTAACCCTA+GGG | 0.606933 | 7_1:-14521141 | Msa1010920:CDS |
| AACCTAGGGTTAGTATAAGG+TGG | 0.606964 | 7_1:+14516871 | None:intergenic |
| CTGGATTGGACTTAACACTC+AGG | 0.608707 | 7_1:-14516519 | Msa1010920:CDS |
| CCAGAAGAGTCAATATCAGA+AGG | 0.609590 | 7_1:+14516538 | None:intergenic |
| TGTGGCTACTACTTCTACAA+CGG | 0.618902 | 7_1:-14516605 | Msa1010920:CDS |
| TCAAATTCCAACGAGTCTGT+CGG | 0.628270 | 7_1:-14521499 | Msa1010920:CDS |
| CCAGAAGAGTCAAACTCGGA+GGG | 0.629968 | 7_1:+14520816 | None:intergenic |
| GAAGAACGAAGAGAAGAACT+CGG | 0.630413 | 7_1:-14521381 | Msa1010920:CDS |
| TTCTTCCCACACAAAAGAAG+GGG | 0.645372 | 7_1:-14521557 | Msa1010920:CDS |
| ACCATATCTAGAACCATTTG+GGG | 0.662106 | 7_1:+14521115 | None:intergenic |
| ATTCTACCCACACAAAAGAA+GGG | 0.662744 | 7_1:-14517326 | Msa1010920:CDS |
| TTGACTCCATTCTAACACCA+AGG | 0.669121 | 7_1:+14521174 | None:intergenic |
| TTAACTCCATTCTAACACCA+AGG | 0.686015 | 7_1:+14516905 | None:intergenic |
| ATGTTGAACCAACATCAACA+GGG | 0.686328 | 7_1:+14521444 | None:intergenic |
| GGTGGTGCAAGGTATGATGG+TGG | 0.697168 | 7_1:-14517012 | Msa1010920:CDS |
| CGTAAAGAAAGGTATGATGG+TGG | 0.699993 | 7_1:-14517030 | Msa1010920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAAAAAAAAAATT+GGG | + | chr7_1:14519751-14519770 | None:intergenic | 0.0% |
| !! | AATAAAAAAAAAAAAAAAAT+TGG | + | chr7_1:14519752-14519771 | None:intergenic | 0.0% |
| !!! | ATTTATTTGTTTATTTTGTT+TGG | - | chr7_1:14517903-14517922 | Msa1010920:intron | 10.0% |
| !!! | AATGAACTTTAAAATTTATT+TGG | - | chr7_1:14518002-14518021 | Msa1010920:intron | 10.0% |
| !!! | TTGAATTTATTTTGAATTAA+TGG | + | chr7_1:14518108-14518127 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAATTGG+GGG | + | chr7_1:14519749-14519768 | None:intergenic | 10.0% |
| !!! | TTTTAAAAGTTTGTATAATA+TGG | - | chr7_1:14519901-14519920 | Msa1010920:intron | 10.0% |
| !!! | GTATAATATTTTTTTTTTGA+AGG | - | chr7_1:14520067-14520086 | Msa1010920:intron | 10.0% |
| !! | ATTTAAAAAAACAATTACTT+TGG | + | chr7_1:14520395-14520414 | None:intergenic | 10.0% |
| !!! | AGTAATTGTTTTTTTAAATT+AGG | - | chr7_1:14520396-14520415 | Msa1010920:intron | 10.0% |
| !!! | AATATCTTTTTTTTTTCTTA+AGG | + | chr7_1:14520619-14520638 | None:intergenic | 10.0% |
| !! | TAATTTGAGAAATAATATTG+TGG | - | chr7_1:14517072-14517091 | Msa1010920:CDS | 15.0% |
| !! | AATTTGAGAAATAATATTGT+GGG | - | chr7_1:14517073-14517092 | Msa1010920:CDS | 15.0% |
| !! | ATATTCTTCTAATAATATAG+AGG | + | chr7_1:14517869-14517888 | None:intergenic | 15.0% |
| !! | GCAGATTTATAAATTAATAT+AGG | - | chr7_1:14517939-14517958 | Msa1010920:intron | 15.0% |
| !! | GTTTAAAAGACAAAATATAT+GGG | + | chr7_1:14518230-14518249 | None:intergenic | 15.0% |
| !!! | TGATAATATAAAAAGTTTTG+AGG | - | chr7_1:14518933-14518952 | Msa1010920:intron | 15.0% |
| !!! | GATAATATAAAAAGTTTTGA+GGG | - | chr7_1:14518934-14518953 | Msa1010920:intron | 15.0% |
| !!! | TTTTTTTTTATTGTTTGAGA+AGG | - | chr7_1:14519760-14519779 | Msa1010920:intron | 15.0% |
| !!! | TTCAATTTTTTTAGACAAAT+CGG | + | chr7_1:14519877-14519896 | None:intergenic | 15.0% |
| !! | AATTGTTTATCTTACTAATA+TGG | - | chr7_1:14519925-14519944 | Msa1010920:intron | 15.0% |
| !!! | TGGTAATTGTTTTTTAAATT+TGG | - | chr7_1:14519945-14519964 | Msa1010920:intron | 15.0% |
| !!! | TTTTTTTGAAGGATATAATA+TGG | - | chr7_1:14520078-14520097 | Msa1010920:intron | 15.0% |
| !! | TTATAAAAAGACAATTACTT+TGG | + | chr7_1:14520306-14520325 | None:intergenic | 15.0% |
| !! | ATATAAAAAGACAATTACTT+TGG | + | chr7_1:14520367-14520386 | None:intergenic | 15.0% |
| !!! | TATATCGATTCAATATATTA+AGG | + | chr7_1:14520440-14520459 | None:intergenic | 15.0% |
| !!! | TTTTTTCTTAAGGAATTTAA+TGG | + | chr7_1:14520609-14520628 | None:intergenic | 15.0% |
| !! | TAATTATTATAAGGTGTAAA+AGG | + | chr7_1:14521189-14521208 | None:intergenic | 15.0% |
| !! | TTACACCTTATAATAATTAT+AGG | - | chr7_1:14521190-14521209 | Msa1010920:intron | 15.0% |
| !! | TACACCTTATAATAATTATA+GGG | - | chr7_1:14521191-14521210 | Msa1010920:intron | 15.0% |
| !! | TAACTTGAGAAATAATATTA+TGG | - | chr7_1:14521341-14521360 | Msa1010920:CDS | 15.0% |
| !! | AACTTGAGAAATAATATTAT+GGG | - | chr7_1:14521342-14521361 | Msa1010920:CDS | 15.0% |
| !! | TTACACCTTATAATAGTTAT+AGG | - | chr7_1:14516921-14516940 | Msa1010920:CDS | 20.0% |
| !! | TACACCTTATAATAGTTATA+GGG | - | chr7_1:14516922-14516941 | Msa1010920:CDS | 20.0% |
| !! | TTCTCAAATTAAAAAGTGAA+GGG | + | chr7_1:14517063-14517082 | None:intergenic | 20.0% |
| !! | TTTCTCAAATTAAAAAGTGA+AGG | + | chr7_1:14517064-14517083 | None:intergenic | 20.0% |
| !! | GTTGGTACAAATAATAAAAT+TGG | - | chr7_1:14517154-14517173 | Msa1010920:CDS | 20.0% |
| !! | ATAAATTATTAGTGTCAATC+TGG | - | chr7_1:14517445-14517464 | Msa1010920:intron | 20.0% |
| !! | CAAAATGAGATTAAAAAACA+GGG | + | chr7_1:14517482-14517501 | None:intergenic | 20.0% |
| !! | TCAAAATGAGATTAAAAAAC+AGG | + | chr7_1:14517483-14517502 | None:intergenic | 20.0% |
| !!! | TAGTGTTTTTTACAAAACTT+GGG | + | chr7_1:14517569-14517588 | None:intergenic | 20.0% |
| !! | TATAATATTTCCTATGTTGT+TGG | + | chr7_1:14517607-14517626 | None:intergenic | 20.0% |
| !! | AACTTAAAACCTTATCTTAA+AGG | - | chr7_1:14517702-14517721 | Msa1010920:intron | 20.0% |
| !!! | ATATATGTACCTTTAAGATA+AGG | + | chr7_1:14517714-14517733 | None:intergenic | 20.0% |
| !! | TTAATAGCATGATTGTTTAA+AGG | - | chr7_1:14517799-14517818 | Msa1010920:intron | 20.0% |
| !! | GGTTTAAAAGACAAAATATA+TGG | + | chr7_1:14518231-14518250 | None:intergenic | 20.0% |
| !!! | AACATAAAATGTTTTCCATA+AGG | + | chr7_1:14518369-14518388 | None:intergenic | 20.0% |
| !!! | ACATAAATTTTGTTTAGTGA+GGG | + | chr7_1:14518502-14518521 | None:intergenic | 20.0% |
| !! | TAGAAAACATAAATCAAACT+AGG | - | chr7_1:14518555-14518574 | Msa1010920:intron | 20.0% |
| !! | AGAAAACATAAATCAAACTA+GGG | - | chr7_1:14518556-14518575 | Msa1010920:intron | 20.0% |
| !! | ATAACGTTTATTACAATGTA+GGG | - | chr7_1:14518608-14518627 | Msa1010920:intron | 20.0% |
| !!! | TTGGAAATTATGATGTTTTT+TGG | - | chr7_1:14519128-14519147 | Msa1010920:intron | 20.0% |
| !!! | TTTTAAGGATGCAAAATTAT+TGG | + | chr7_1:14519304-14519323 | None:intergenic | 20.0% |
| !!! | GCAAGATCATTTTTTTTTTA+AGG | + | chr7_1:14519319-14519338 | None:intergenic | 20.0% |
| !! | AAAAAAAATGATCTTGCTAA+CGG | - | chr7_1:14519322-14519341 | Msa1010920:intron | 20.0% |
| !!! | TCCTATTTTTTGTTTAAAGT+TGG | - | chr7_1:14519409-14519428 | Msa1010920:intron | 20.0% |
| !! | TCCAACTTTAAACAAAAAAT+AGG | + | chr7_1:14519413-14519432 | None:intergenic | 20.0% |
| !! | CTTAAAAAACTAGAATAGTA+AGG | + | chr7_1:14519568-14519587 | None:intergenic | 20.0% |
| !!! | CTATTCTAGTTTTTTAAGTT+CGG | - | chr7_1:14519570-14519589 | Msa1010920:intron | 20.0% |
| !!! | TATTCTAGTTTTTTAAGTTC+GGG | - | chr7_1:14519571-14519590 | Msa1010920:intron | 20.0% |
| !! | TGTCTATATTTACTTTAACA+CGG | + | chr7_1:14520477-14520496 | None:intergenic | 20.0% |
| !! | ATATTCATGCACAAATTAAA+CGG | - | chr7_1:14520536-14520555 | Msa1010920:intron | 20.0% |
| !! | GTACTAGAATAATTGAAATA+AGG | + | chr7_1:14521165-14521184 | None:intergenic | 20.0% |
| !! | ACACCTTATAATAATTATAG+GGG | - | chr7_1:14521192-14521211 | Msa1010920:intron | 20.0% |
| ! | ACACCTTATAATAGTTATAG+GGG | - | chr7_1:14516923-14516942 | Msa1010920:CDS | 25.0% |
| ! | TAGGAAAATAATGACAATCA+AGG | + | chr7_1:14517512-14517531 | None:intergenic | 25.0% |
| !!! | GTAGTGTTTTTTACAAAACT+TGG | + | chr7_1:14517570-14517589 | None:intergenic | 25.0% |
| ! | TAACTCAAAAACTATTTCCA+AGG | - | chr7_1:14517676-14517695 | Msa1010920:intron | 25.0% |
| ! | TCTTCTAATAATATAGAGGT+GGG | + | chr7_1:14517865-14517884 | None:intergenic | 25.0% |
| ! | TTCTTCTAATAATATAGAGG+TGG | + | chr7_1:14517866-14517885 | None:intergenic | 25.0% |
| ! | GTTAGTAAAAACAAATTCAG+AGG | + | chr7_1:14518252-14518271 | None:intergenic | 25.0% |
| !!! | GATTTAAAGTTTTGAGTTCT+TGG | + | chr7_1:14518284-14518303 | None:intergenic | 25.0% |
| !!! | CACATAAATTTTGTTTAGTG+AGG | + | chr7_1:14518503-14518522 | None:intergenic | 25.0% |
| ! | GATAACGTTTATTACAATGT+AGG | - | chr7_1:14518607-14518626 | Msa1010920:intron | 25.0% |
| ! | AGTCTCATAATGATTATTGT+TGG | - | chr7_1:14518716-14518735 | Msa1010920:intron | 25.0% |
| ! | GTCTCATAATGATTATTGTT+GGG | - | chr7_1:14518717-14518736 | Msa1010920:intron | 25.0% |
| ! | TGATAATCACTTAAAACTTG+TGG | - | chr7_1:14518771-14518790 | Msa1010920:intron | 25.0% |
| ! | TGAGTATTATTAGATTCTAC+TGG | + | chr7_1:14518886-14518905 | None:intergenic | 25.0% |
| ! | AGTAGAATCTAATAATACTC+AGG | - | chr7_1:14518885-14518904 | Msa1010920:intron | 25.0% |
| !!! | ATCAATTTTTTCGTGATTGA+AGG | + | chr7_1:14518973-14518992 | None:intergenic | 25.0% |
| ! | AAATTGATACCATCTATATG+TGG | - | chr7_1:14518985-14519004 | Msa1010920:intron | 25.0% |
| ! | GATAACATTTGCATATAATG+AGG | + | chr7_1:14519102-14519121 | None:intergenic | 25.0% |
| ! | TTTCTTTCTCTTAGATTTAG+AGG | + | chr7_1:14519231-14519250 | None:intergenic | 25.0% |
| ! | CTAAATCTAAGAGAAAGAAA+CGG | - | chr7_1:14519231-14519250 | Msa1010920:intron | 25.0% |
| ! | TAAATCTAAGAGAAAGAAAC+GGG | - | chr7_1:14519232-14519251 | Msa1010920:intron | 25.0% |
| !! | AACGGTTATTAGATATTTTG+TGG | - | chr7_1:14519340-14519359 | Msa1010920:intron | 25.0% |
| !!! | TTGTTCCTTTTATTTTTCTC+TGG | - | chr7_1:14519471-14519490 | Msa1010920:intron | 25.0% |
| !!! | TGTTCCTTTTATTTTTCTCT+GGG | - | chr7_1:14519472-14519491 | Msa1010920:intron | 25.0% |
| ! | TAAACCCAGAGAAAAATAAA+AGG | + | chr7_1:14519479-14519498 | None:intergenic | 25.0% |
| !!! | TTTATTTTCTTGTTCCATCT+GGG | - | chr7_1:14519711-14519730 | Msa1010920:intron | 25.0% |
| !! | TTTATTGTTTGAGAAGGTTT+TGG | - | chr7_1:14519766-14519785 | Msa1010920:intron | 25.0% |
| ! | AAACAAGAACATAAAGAGAA+GGG | + | chr7_1:14519801-14519820 | None:intergenic | 25.0% |
| ! | CTATATTTATATATCCAGCT+AGG | - | chr7_1:14519825-14519844 | Msa1010920:intron | 25.0% |
| ! | GTCTATATTTACTTTAACAC+GGG | + | chr7_1:14520476-14520495 | None:intergenic | 25.0% |
| !! | ATTGTCTTTCCTTATTTCAA+AGG | - | chr7_1:14520577-14520596 | Msa1010920:intron | 25.0% |
| !!! | TGGAAATATCCTTTGAAATA+AGG | + | chr7_1:14520589-14520608 | None:intergenic | 25.0% |
| ! | GAAAAAATTATTTGAGTGAG+TGG | + | chr7_1:14520643-14520662 | None:intergenic | 25.0% |
| ! | TTCTCAAGTTAAAAAGTGAA+GGG | + | chr7_1:14521332-14521351 | None:intergenic | 25.0% |
| ! | TTTCTCAAGTTAAAAAGTGA+AGG | + | chr7_1:14521333-14521352 | None:intergenic | 25.0% |
| ! | AATATTATGGGTAGTAATAC+AGG | - | chr7_1:14521354-14521373 | Msa1010920:CDS | 25.0% |
| ! | GTTGGTACAAATAATCAAAT+TGG | - | chr7_1:14521423-14521442 | Msa1010920:intron | 25.0% |
| !! | TCGTTGGAATTTGATTTTGA+GGG | + | chr7_1:14516615-14516634 | None:intergenic | 30.0% |
| TTTCCTAATAACAGCAATGA+AGG | - | chr7_1:14516704-14516723 | Msa1010920:CDS | 30.0% | |
| TTCCTAATAACAGCAATGAA+GGG | - | chr7_1:14516705-14516724 | Msa1010920:CDS | 30.0% | |
| TCTACTTTACAAGGATTAAG+AGG | - | chr7_1:14516800-14516819 | Msa1010920:CDS | 30.0% | |
| CTACTTTACAAGGATTAAGA+GGG | - | chr7_1:14516801-14516820 | Msa1010920:CDS | 30.0% | |
| TGGAAAAACAACGTAGAAAA+AGG | - | chr7_1:14516855-14516874 | Msa1010920:CDS | 30.0% | |
| ! | AACCATATCTAGAACCATTT+GGG | + | chr7_1:14517009-14517028 | None:intergenic | 30.0% |
| ! | TAACCATATCTAGAACCATT+TGG | + | chr7_1:14517010-14517029 | None:intergenic | 30.0% |
| !! | AATGGTTCTAGATATGGTTA+TGG | - | chr7_1:14517010-14517029 | Msa1010920:CDS | 30.0% |
| AGTACTTCAAGAATTGAAGT+TGG | - | chr7_1:14517136-14517155 | Msa1010920:CDS | 30.0% | |
| TTCCTCTTGAAGTTATGTAT+TGG | - | chr7_1:14517382-14517401 | Msa1010920:intron | 30.0% | |
| TACCAATACATAACTTCAAG+AGG | + | chr7_1:14517387-14517406 | None:intergenic | 30.0% | |
| TTTAACATCACCAACAACAT+AGG | - | chr7_1:14517594-14517613 | Msa1010920:intron | 30.0% | |
| !!! | TAAGGTTTTAAGTTAGTCCT+TGG | + | chr7_1:14517696-14517715 | None:intergenic | 30.0% |
| ! | TTTGTTTGGAAGATGTCTTT+TGG | - | chr7_1:14517917-14517936 | Msa1010920:intron | 30.0% |
| CTTACATGCAATTAAACAGT+TGG | + | chr7_1:14518075-14518094 | None:intergenic | 30.0% | |
| ! | AGCTATTATTTTCTGATACC+AGG | - | chr7_1:14518144-14518163 | Msa1010920:intron | 30.0% |
| ! | GCTATTATTTTCTGATACCA+GGG | - | chr7_1:14518145-14518164 | Msa1010920:intron | 30.0% |
| ! | CTATTATTTTCTGATACCAG+GGG | - | chr7_1:14518146-14518165 | Msa1010920:intron | 30.0% |
| !!! | ATATTGCACCTTTTTAAGTC+CGG | + | chr7_1:14518206-14518225 | None:intergenic | 30.0% |
| TAAAACTTGTGGAACTCAAA+TGG | - | chr7_1:14518782-14518801 | Msa1010920:intron | 30.0% | |
| GCTATTGTTGTGATATATGT+TGG | - | chr7_1:14519022-14519041 | Msa1010920:intron | 30.0% | |
| TATATGTTGGATATCGTTGT+AGG | - | chr7_1:14519035-14519054 | Msa1010920:intron | 30.0% | |
| AACATTTGCATATAATGAGG+AGG | + | chr7_1:14519099-14519118 | None:intergenic | 30.0% | |
| ACATCATAATTTCCAAGTCA+TGG | + | chr7_1:14519124-14519143 | None:intergenic | 30.0% | |
| !!! | TATGATGTTTTTTGGAGTAG+TGG | - | chr7_1:14519136-14519155 | Msa1010920:intron | 30.0% |
| !!! | ATGATGTTTTTTGGAGTAGT+GGG | - | chr7_1:14519137-14519156 | Msa1010920:intron | 30.0% |
| CAACGAAAGATGTCAAATTA+GGG | + | chr7_1:14519374-14519393 | None:intergenic | 30.0% | |
| ACAACGAAAGATGTCAAATT+AGG | + | chr7_1:14519375-14519394 | None:intergenic | 30.0% | |
| AAAAAAATGAGAGTAACGTC+CGG | + | chr7_1:14519513-14519532 | None:intergenic | 30.0% | |
| ACACAAAGTAGAAAAGAAGA+AGG | + | chr7_1:14519683-14519702 | None:intergenic | 30.0% | |
| !! | GTTTATTTTCTTGTTCCATC+TGG | - | chr7_1:14519710-14519729 | Msa1010920:intron | 30.0% |
| AACAAGAACATAAAGAGAAG+GGG | + | chr7_1:14519800-14519819 | None:intergenic | 30.0% | |
| GAAACAAGAACATAAAGAGA+AGG | + | chr7_1:14519802-14519821 | None:intergenic | 30.0% | |
| CAAGTTTATGAGATGAGAAT+TGG | - | chr7_1:14520024-14520043 | Msa1010920:intron | 30.0% | |
| ATATTTACTTTAACACGGGT+TGG | + | chr7_1:14520472-14520491 | None:intergenic | 30.0% | |
| GAAAAGAGAAGCTCATATAA+AGG | + | chr7_1:14520676-14520695 | None:intergenic | 30.0% | |
| !! | TCGATAGTTAATTTGTACCA+TGG | - | chr7_1:14520726-14520745 | Msa1010920:intron | 30.0% |
| !! | TTGCTGGAATTTGATTTTGA+GGG | + | chr7_1:14520847-14520866 | None:intergenic | 30.0% |
| ATGTTGAACCAACTTGAATA+GGG | + | chr7_1:14520912-14520931 | None:intergenic | 30.0% | |
| TTTCCTAATAACAGCAATGA+AGG | - | chr7_1:14516704-14516723 | Msa1010920:CDS | 30.0% | |
| TTCCTAATAACAGCAATGAA+GGG | - | chr7_1:14516705-14516724 | Msa1010920:CDS | 30.0% | |
| TGGAAAAACAACGTAAAGAA+AGG | - | chr7_1:14521079-14521098 | Msa1010920:CDS | 30.0% | |
| AGGCCCCTATAATTATTATA+AGG | + | chr7_1:14521198-14521217 | None:intergenic | 30.0% | |
| TATAATAATTATAGGGGCCT+TGG | - | chr7_1:14521198-14521217 | Msa1010920:intron | 30.0% | |
| ! | ATAAACCTAGGGTTAGTATA+AGG | + | chr7_1:14521255-14521274 | None:intergenic | 30.0% |
| ! | AACCATATCTAGAACCATTT+GGG | + | chr7_1:14517009-14517028 | None:intergenic | 30.0% |
| ! | TAACCATATCTAGAACCATT+TGG | + | chr7_1:14517010-14517029 | None:intergenic | 30.0% |
| !! | AATGGTTCTAGATATGGTTA+TGG | - | chr7_1:14517010-14517029 | Msa1010920:CDS | 30.0% |
| AGTACTTCAAGAATTGAAGT+TGG | - | chr7_1:14517136-14517155 | Msa1010920:CDS | 30.0% | |
| !! | ATTGGTGCTATTCTAAAACT+TGG | - | chr7_1:14521441-14521460 | Msa1010920:intron | 30.0% |
| TCTTCCACTTCAAAAGATGA+AGG | - | chr7_1:14516537-14516556 | Msa1010920:CDS | 35.0% | |
| !! | ATCACCTTCATCTTTTGAAG+TGG | + | chr7_1:14516544-14516563 | None:intergenic | 35.0% |
| ATTCTTCCCACACAAAAGAA+GGG | - | chr7_1:14516562-14516581 | Msa1010920:CDS | 35.0% | |
| !! | CTCGTTGGAATTTGATTTTG+AGG | + | chr7_1:14516616-14516635 | None:intergenic | 35.0% |
| ATGTTGAACCAACATCAACA+GGG | + | chr7_1:14516679-14516698 | None:intergenic | 35.0% | |
| AATGTTGAACCAACATCAAC+AGG | + | chr7_1:14516680-14516699 | None:intergenic | 35.0% | |
| ! | TTCCCTTCATTGCTGTTATT+AGG | + | chr7_1:14516710-14516729 | None:intergenic | 35.0% |
| GGGCAATATTCTACTTTACA+AGG | - | chr7_1:14516791-14516810 | Msa1010920:CDS | 35.0% | |
| ! | CAACGTAGAAAAAGGTATGA+TGG | - | chr7_1:14516863-14516882 | Msa1010920:CDS | 35.0% |
| AGGCCCCTATAACTATTATA+AGG | + | chr7_1:14516929-14516948 | None:intergenic | 35.0% | |
| TATAATAGTTATAGGGGCCT+TGG | - | chr7_1:14516929-14516948 | Msa1010920:CDS | 35.0% | |
| AAACACCTTATACTAACCCT+AGG | - | chr7_1:14516978-14516997 | Msa1010920:CDS | 35.0% | |
| AACACCTTATACTAACCCTA+GGG | - | chr7_1:14516979-14516998 | Msa1010920:CDS | 35.0% | |
| ! | ACCATATCTAGAACCATTTG+GGG | + | chr7_1:14517008-14517027 | None:intergenic | 35.0% |
| AATATTGTGGGTAGTAATGC+TGG | - | chr7_1:14517085-14517104 | Msa1010920:CDS | 35.0% | |
| CACAGACAAGAAAAATGTTG+TGG | - | chr7_1:14517228-14517247 | Msa1010920:CDS | 35.0% | |
| GTGTTTGTCTTGATGCTAAT+AGG | + | chr7_1:14517531-14517550 | None:intergenic | 35.0% | |
| !!! | TATTGCACCTTTTTAAGTCC+GGG | + | chr7_1:14518205-14518224 | None:intergenic | 35.0% |
| AGTTGTGCATGAAGAATACT+CGG | + | chr7_1:14518749-14518768 | None:intergenic | 35.0% | |
| !!! | TGTTGTTTTGTTCCCATAGT+TGG | - | chr7_1:14518850-14518869 | Msa1010920:intron | 35.0% |
| ATTAGATTCTACTGGAGCTT+TGG | + | chr7_1:14518878-14518897 | None:intergenic | 35.0% | |
| CAAAAGCTTCCACATATAGA+TGG | + | chr7_1:14518997-14519016 | None:intergenic | 35.0% | |
| TGCAAATGTTATCCATGACT+TGG | - | chr7_1:14519109-14519128 | Msa1010920:intron | 35.0% | |
| AAAAAATGAGAGTAACGTCC+GGG | + | chr7_1:14519512-14519531 | None:intergenic | 35.0% | |
| !!! | GTTTGAGAAGGTTTTGGTTT+AGG | - | chr7_1:14519772-14519791 | Msa1010920:intron | 35.0% |
| ACAAGAACATAAAGAGAAGG+GGG | + | chr7_1:14519799-14519818 | None:intergenic | 35.0% | |
| ! | TTTTAGACAAATCGGATCAG+AGG | + | chr7_1:14519869-14519888 | None:intergenic | 35.0% |
| TTGTGCATGAATATCTCTGT+CGG | + | chr7_1:14520530-14520549 | None:intergenic | 35.0% | |
| CATCAAATCTGAAAACCACA+AGG | - | chr7_1:14520695-14520714 | Msa1010920:intron | 35.0% | |
| CTATCGAAAACAATACCTTG+TGG | + | chr7_1:14520713-14520732 | None:intergenic | 35.0% | |
| ATTCTACCCACACAAAAGAA+GGG | - | chr7_1:14520794-14520813 | Msa1010920:intron | 35.0% | |
| !! | CTTGCTGGAATTTGATTTTG+AGG | + | chr7_1:14520848-14520867 | None:intergenic | 35.0% |
| GATGTTGAACCAACTTGAAT+AGG | + | chr7_1:14520913-14520932 | None:intergenic | 35.0% | |
| ! | TTCCCTTCATTGCTGTTATT+AGG | + | chr7_1:14516710-14516729 | None:intergenic | 35.0% |
| ! | CAACGTAAAGAAAGGTATGA+TGG | - | chr7_1:14521087-14521106 | Msa1010920:CDS | 35.0% |
| TTAACTCCATTCTAACACCA+AGG | + | chr7_1:14521218-14521237 | None:intergenic | 35.0% | |
| ! | AACCATTTGGGATAAACCTA+GGG | + | chr7_1:14521266-14521285 | None:intergenic | 35.0% |
| !! | ATCCCAAATGGTTCTAGATA+TGG | - | chr7_1:14521273-14521292 | Msa1010920:CDS | 35.0% |
| GACAGACAAGAAAAATGTTG+TGG | - | chr7_1:14521497-14521516 | Msa1010920:CDS | 35.0% | |
| !! | TGATATTGACTCTTCTGGAT+TGG | - | chr7_1:14521587-14521606 | Msa1010920:CDS | 35.0% |
| GATTCTTCCCACACAAAAGA+AGG | - | chr7_1:14516561-14516580 | Msa1010920:CDS | 40.0% | |
| TTCTTCCCACACAAAAGAAG+GGG | - | chr7_1:14516563-14516582 | Msa1010920:CDS | 40.0% | |
| AAAAGAAGGGGTGAACATGA+AGG | - | chr7_1:14516575-14516594 | Msa1010920:CDS | 40.0% | |
| TCAAATTCCAACGAGTCTGT+CGG | - | chr7_1:14516621-14516640 | Msa1010920:CDS | 40.0% | |
| GCTACAACATCATCTTTCGA+TGG | + | chr7_1:14516657-14516676 | None:intergenic | 40.0% | |
| GAAGAACGAAGAGAAGAACT+CGG | - | chr7_1:14516739-14516758 | Msa1010920:CDS | 40.0% | |
| ! | TTTTGCATGCTCGTATTGCA+AGG | - | chr7_1:14516769-14516788 | Msa1010920:CDS | 40.0% |
| TTTGCATGCTCGTATTGCAA+GGG | - | chr7_1:14516770-14516789 | Msa1010920:CDS | 40.0% | |
| CAATGCACGTTCTGCTTTAT+GGG | + | chr7_1:14516837-14516856 | None:intergenic | 40.0% | |
| ! | CGTAGAAAAAGGTATGATGG+CGG | - | chr7_1:14516866-14516885 | Msa1010920:CDS | 40.0% |
| TTGACTCCATTCTAACACCA+AGG | + | chr7_1:14516949-14516968 | None:intergenic | 40.0% | |
| ! | GTAACCCTAGGGTTAGTATA+AGG | + | chr7_1:14516986-14517005 | None:intergenic | 40.0% |
| !! | ACCCCAAATGGTTCTAGATA+TGG | - | chr7_1:14517004-14517023 | Msa1010920:CDS | 40.0% |
| TAGATTCATCTGCTGCTACA+AGG | - | chr7_1:14517194-14517213 | Msa1010920:CDS | 40.0% | |
| GAAAAATGTTGTGGCTGCAA+TGG | - | chr7_1:14517237-14517256 | Msa1010920:CDS | 40.0% | |
| ! | TAGAGGTGGGATACACTTTT+TGG | + | chr7_1:14517852-14517871 | None:intergenic | 40.0% |
| ! | TTATTTTCTGATACCAGGGG+AGG | - | chr7_1:14518149-14518168 | Msa1010920:intron | 40.0% |
| !!! | ATTGCACCTTTTTAAGTCCG+GGG | + | chr7_1:14518204-14518223 | None:intergenic | 40.0% |
| GAAGACACACTCTAGTCTAA+GGG | + | chr7_1:14518306-14518325 | None:intergenic | 40.0% | |
| TGAAGACACACTCTAGTCTA+AGG | + | chr7_1:14518307-14518326 | None:intergenic | 40.0% | |
| TTCCATAAGGACACAGAGTA+CGG | + | chr7_1:14518356-14518375 | None:intergenic | 40.0% | |
| GAGTTAAACTTCAGAGACCA+CGG | - | chr7_1:14518389-14518408 | Msa1010920:intron | 40.0% | |
| !! | TGTGTGATTTGTTATCACCG+TGG | + | chr7_1:14518409-14518428 | None:intergenic | 40.0% |
| TTGGATATCGTTGTAGGTCA+TGG | - | chr7_1:14519041-14519060 | Msa1010920:intron | 40.0% | |
| !!! | ATGTTTTTTGGAGTAGTGGG+TGG | - | chr7_1:14519140-14519159 | Msa1010920:intron | 40.0% |
| !!! | TGTTTTTTGGAGTAGTGGGT+GGG | - | chr7_1:14519141-14519160 | Msa1010920:intron | 40.0% |
| ! | AGAGAAAGAAACGGGTTCAA+AGG | - | chr7_1:14519240-14519259 | Msa1010920:intron | 40.0% |
| ! | GAGAAAGAAACGGGTTCAAA+GGG | - | chr7_1:14519241-14519260 | Msa1010920:intron | 40.0% |
| ! | TGGGTTTAATTTATGTCCCC+CGG | - | chr7_1:14519491-14519510 | Msa1010920:intron | 40.0% |
| AAAAATGAGAGTAACGTCCG+GGG | + | chr7_1:14519511-14519530 | None:intergenic | 40.0% | |
| ! | TGTGACAGTCATTTGGAGTT+TGG | - | chr7_1:14519594-14519613 | Msa1010920:intron | 40.0% |
| !!! | GTTTGGCACTGTTTTTTTGC+TGG | - | chr7_1:14519611-14519630 | Msa1010920:intron | 40.0% |
| !!! | CTGTTTTTTTGCTGGTTGTG+TGG | - | chr7_1:14519619-14519638 | Msa1010920:intron | 40.0% |
| !! | TTTTTGCTGGTTGTGTGGTT+TGG | - | chr7_1:14519624-14519643 | Msa1010920:intron | 40.0% |
| TTTCTTGTTCCATCTGGGTT+TGG | - | chr7_1:14519716-14519735 | Msa1010920:intron | 40.0% | |
| ATCACCTTCATCTTGTGAAG+TGG | + | chr7_1:14520776-14520795 | None:intergenic | 40.0% | |
| GATTCTACCCACACAAAAGA+AGG | - | chr7_1:14520793-14520812 | Msa1010920:intron | 40.0% | |
| GTTGTTAGCCCTATTCAAGT+TGG | - | chr7_1:14520901-14520920 | Msa1010920:CDS | 40.0% | |
| ! | GGGAAATTTTCTACTCTCCA+AGG | - | chr7_1:14521015-14521034 | Msa1010920:intron | 40.0% |
| ! | TTTTCTACTCTCCAAGGCTT+AGG | - | chr7_1:14521021-14521040 | Msa1010920:intron | 40.0% |
| ! | CGTAAAGAAAGGTATGATGG+TGG | - | chr7_1:14521090-14521109 | Msa1010920:CDS | 40.0% |
| ! | ATGGTGGTGCTTTAGGTTTA+GGG | - | chr7_1:14521124-14521143 | Msa1010920:CDS | 40.0% |
| AACCACCTTATACTAACCCT+AGG | - | chr7_1:14521247-14521266 | Msa1010920:intron | 40.0% | |
| ! | AACCTAGGGTTAGTATAAGG+TGG | + | chr7_1:14521252-14521271 | None:intergenic | 40.0% |
| AACCCTAGGTTTATCCCAAA+TGG | - | chr7_1:14521261-14521280 | Msa1010920:intron | 40.0% | |
| ! | GAACCATTTGGGATAAACCT+AGG | + | chr7_1:14521267-14521286 | None:intergenic | 40.0% |
| ATGGGTAGTAATACAGGAGT+TGG | - | chr7_1:14521360-14521379 | Msa1010920:CDS | 40.0% | |
| AATACAGGAGTTGGAACTCT+AGG | - | chr7_1:14521369-14521388 | Msa1010920:CDS | 40.0% | |
| !! | GTTGGAACTCTAGGTTTTGT+TGG | - | chr7_1:14521378-14521397 | Msa1010920:CDS | 40.0% |
| TGTGGCTACTACTTCTACAA+CGG | - | chr7_1:14521515-14521534 | Msa1010920:CDS | 40.0% | |
| CCAGAAGAGTCAATATCAGA+AGG | + | chr7_1:14521585-14521604 | None:intergenic | 40.0% | |
| !! | CCTTCTGATATTGACTCTTC+TGG | - | chr7_1:14521582-14521601 | Msa1010920:CDS | 40.0% |
| GGAAGAGATGCTGAAGGATT+TGG | + | chr7_1:14516523-14516542 | None:intergenic | 45.0% | |
| TGAAGTGGAAGAGATGCTGA+AGG | + | chr7_1:14516529-14516548 | None:intergenic | 45.0% | |
| ! | GTTCACCCCTTCTTTTGTGT+GGG | + | chr7_1:14516571-14516590 | None:intergenic | 45.0% |
| ! | TGTTCACCCCTTCTTTTGTG+TGG | + | chr7_1:14516572-14516591 | None:intergenic | 45.0% |
| TGTTGTAGCCCTGTTGATGT+TGG | - | chr7_1:14516668-14516687 | Msa1010920:CDS | 45.0% | |
| TTGCATGCTCGTATTGCAAG+GGG | - | chr7_1:14516771-14516790 | Msa1010920:CDS | 45.0% | |
| CCAATGCACGTTCTGCTTTA+TGG | + | chr7_1:14516838-14516857 | None:intergenic | 45.0% | |
| CCATAAAGCAGAACGTGCAT+TGG | - | chr7_1:14516835-14516854 | Msa1010920:CDS | 45.0% | |
| ! | AACCATTTGGGGTAACCCTA+GGG | + | chr7_1:14516997-14517016 | None:intergenic | 45.0% |
| AATGCTGGAGTTGGAACTCT+AGG | - | chr7_1:14517100-14517119 | Msa1010920:CDS | 45.0% | |
| GGAGTTGGAACTCTAGGTAT+TGG | - | chr7_1:14517106-14517125 | Msa1010920:CDS | 45.0% | |
| !! | GTTGGAACTCTAGGTATTGG+TGG | - | chr7_1:14517109-14517128 | Msa1010920:CDS | 45.0% |
| AAGCCCAGAAGAGTCAAACT+CGG | + | chr7_1:14517311-14517330 | None:intergenic | 45.0% | |
| !! | GTGGGATACACTTTTTGGTG+TGG | + | chr7_1:14517847-14517866 | None:intergenic | 45.0% |
| TGAACACCCCGGACTTAAAA+AGG | - | chr7_1:14518195-14518214 | Msa1010920:intron | 45.0% | |
| TACGGTGGCACGATTGAATA+CGG | + | chr7_1:14518338-14518357 | None:intergenic | 45.0% | |
| ! | GGAGCTTTGGTTCCAACTAT+GGG | + | chr7_1:14518865-14518884 | None:intergenic | 45.0% |
| ! | TGGAGCTTTGGTTCCAACTA+TGG | + | chr7_1:14518866-14518885 | None:intergenic | 45.0% |
| AAAATGAGAGTAACGTCCGG+GGG | + | chr7_1:14519510-14519529 | None:intergenic | 45.0% | |
| ! | ACTGCCACTTCACAAGATGA+AGG | - | chr7_1:14520769-14520788 | Msa1010920:intron | 45.0% |
| AAAAGAAGGGCTGAGCATGA+AGG | - | chr7_1:14520807-14520826 | Msa1010920:intron | 45.0% | |
| ! | AGGGCATCAAAATGCCCATA+AGG | - | chr7_1:14516820-14516839 | Msa1010920:CDS | 45.0% |
| CAATGCACGTTCTGCCTTAT+GGG | + | chr7_1:14521061-14521080 | None:intergenic | 45.0% | |
| !! | AAAGGTATGATGGTGGTGCA+AGG | - | chr7_1:14521097-14521116 | Msa1010920:CDS | 45.0% |
| !! | AGGTATGATGGTGGTGCTTT+AGG | - | chr7_1:14521117-14521136 | Msa1010920:CDS | 45.0% |
| ! | GATGGTGGTGCTTTAGGTTT+AGG | - | chr7_1:14521123-14521142 | Msa1010920:CDS | 45.0% |
| ! | CTGGATTGGACTTAACACTC+AGG | - | chr7_1:14521601-14521620 | Msa1010920:CDS | 45.0% |
| !! | AAAAAAAAAAAATTATTGAT+TGG | + | chr7_1:14518042-14518061 | None:intergenic | 5.0% |
| !! | TAAAAAAAAAAAAAAAATTG+GGG | + | chr7_1:14519750-14519769 | None:intergenic | 5.0% |
| !!! | GTTTTTTTTTTTTTTAAATT+TGG | - | chr7_1:14520106-14520125 | Msa1010920:intron | 5.0% |
| !! | TTAAAATATTTATACTAATA+TGG | - | chr7_1:14520261-14520280 | Msa1010920:intron | 5.0% |
| !! | TTATAATATTTATACTAATA+TGG | - | chr7_1:14520320-14520339 | Msa1010920:intron | 5.0% |
| ! | TTCCAACGAGTCTGTCGGTT+CGG | - | chr7_1:14516626-14516645 | Msa1010920:CDS | 50.0% |
| !! | TAGGGGCCTTGGTGTTAGAA+TGG | - | chr7_1:14516940-14516959 | Msa1010920:CDS | 50.0% |
| AACCCTAGGGTTACCCCAAA+TGG | - | chr7_1:14516992-14517011 | Msa1010920:CDS | 50.0% | |
| ! | GAACCATTTGGGGTAACCCT+AGG | + | chr7_1:14516998-14517017 | None:intergenic | 50.0% |
| GTGGGTAGTAATGCTGGAGT+TGG | - | chr7_1:14517091-14517110 | Msa1010920:CDS | 50.0% | |
| CCAGAAGAGTCAAACTCGGA+GGG | + | chr7_1:14517307-14517326 | None:intergenic | 50.0% | |
| CCTCCGAGTTTGACTCTTCT+GGG | - | chr7_1:14517305-14517324 | Msa1010920:CDS | 50.0% | |
| CTGGGCTTGACTTAACACTC+AGG | - | chr7_1:14517323-14517342 | Msa1010920:CDS | 50.0% | |
| ! | TTTTCTGATACCAGGGGAGG+AGG | - | chr7_1:14518152-14518171 | Msa1010920:intron | 50.0% |
| GGTGGTTCAATTGAACACCC+CGG | - | chr7_1:14518184-14518203 | Msa1010920:intron | 50.0% | |
| ACGGTGGCACGATTGAATAC+GGG | + | chr7_1:14518337-14518356 | None:intergenic | 50.0% | |
| CATAAGGACACAGAGTACGG+TGG | + | chr7_1:14518353-14518372 | None:intergenic | 50.0% | |
| CACCGTACTCTGTGTCCTTA+TGG | - | chr7_1:14518351-14518370 | Msa1010920:intron | 50.0% | |
| TGTAGGTCATGGACCACGAT+AGG | - | chr7_1:14519052-14519071 | Msa1010920:intron | 50.0% | |
| GTAGGTCATGGACCACGATA+GGG | - | chr7_1:14519053-14519072 | Msa1010920:intron | 50.0% | |
| GACGCTAAAACACCCTATCG+TGG | + | chr7_1:14519068-14519087 | None:intergenic | 50.0% | |
| GTTCGGGTGTGACAGTCATT+TGG | - | chr7_1:14519587-14519606 | Msa1010920:intron | 50.0% | |
| GGACAAATGCCAAACCCAGA+TGG | + | chr7_1:14519728-14519747 | None:intergenic | 50.0% | |
| TCCAGCTAGGTTGTTGCAGT+TGG | - | chr7_1:14519838-14519857 | Msa1010920:intron | 50.0% | |
| ACCAACTGCAACAACCTAGC+TGG | + | chr7_1:14519842-14519861 | None:intergenic | 50.0% | |
| GCTAACAGGTTTGGATGCCA+TGG | + | chr7_1:14520746-14520765 | None:intergenic | 50.0% | |
| GGCAGTGATGCTAACAGGTT+TGG | + | chr7_1:14520755-14520774 | None:intergenic | 50.0% | |
| GAAGTGGCAGTGATGCTAAC+AGG | + | chr7_1:14520760-14520779 | None:intergenic | 50.0% | |
| ! | GCTCAGCCCTTCTTTTGTGT+GGG | + | chr7_1:14520803-14520822 | None:intergenic | 50.0% |
| ! | TGCTCAGCCCTTCTTTTGTG+TGG | + | chr7_1:14520804-14520823 | None:intergenic | 50.0% |
| ! | TTCCAGCAAGTCTGTCGCTT+TGG | - | chr7_1:14520858-14520877 | Msa1010920:CDS | 50.0% |
| TTCCAAAGCGACAGACTTGC+TGG | + | chr7_1:14520863-14520882 | None:intergenic | 50.0% | |
| TCTACTCTCCAAGGCTTAGG+AGG | - | chr7_1:14521024-14521043 | Msa1010920:intron | 50.0% | |
| CTACTCTCCAAGGCTTAGGA+GGG | - | chr7_1:14521025-14521044 | Msa1010920:intron | 50.0% | |
| TTTGATGCCCTCCTAAGCCT+TGG | + | chr7_1:14521035-14521054 | None:intergenic | 50.0% | |
| CCAATGCACGTTCTGCCTTA+TGG | + | chr7_1:14521062-14521081 | None:intergenic | 50.0% | |
| CCATAAGGCAGAACGTGCAT+TGG | - | chr7_1:14521059-14521078 | Msa1010920:CDS | 50.0% | |
| ! | GATGGTGGTGCAAGGTATGA+TGG | - | chr7_1:14521105-14521124 | Msa1010920:CDS | 50.0% |
| !! | TAGGGGCCTTGGTGTTAGAA+TGG | - | chr7_1:14516940-14516959 | Msa1010920:CDS | 50.0% |
| TACCGAACCGACAGACTCGT+TGG | + | chr7_1:14516631-14516650 | None:intergenic | 55.0% | |
| ! | GATGGCGGTGCTAGTGCTTT+AGG | - | chr7_1:14516881-14516900 | Msa1010920:CDS | 55.0% |
| CCCTCCGAGTTTGACTCTTC+TGG | - | chr7_1:14517304-14517323 | Msa1010920:CDS | 55.0% | |
| CCCAGAAGAGTCAAACTCGG+AGG | + | chr7_1:14517308-14517327 | None:intergenic | 55.0% | |
| GGCACGATTGAATACGGGGA+GGG | + | chr7_1:14518332-14518351 | None:intergenic | 55.0% | |
| TGGCACGATTGAATACGGGG+AGG | + | chr7_1:14518333-14518352 | None:intergenic | 55.0% | |
| CGGTGGCACGATTGAATACG+GGG | + | chr7_1:14518336-14518355 | None:intergenic | 55.0% | |
| GGTGGTGCAAGGTATGATGG+TGG | - | chr7_1:14521108-14521127 | Msa1010920:CDS | 55.0% | |
| TCTGATACCAGGGGAGGAGG+CGG | - | chr7_1:14518155-14518174 | Msa1010920:intron | 60.0% | |
| CTGATACCAGGGGAGGAGGC+GGG | - | chr7_1:14518156-14518175 | Msa1010920:intron | 65.0% | |
| CTTAAACCCGCCTCCTCCCC+TGG | + | chr7_1:14518165-14518184 | None:intergenic | 65.0% | |
| ! | CAGGGGAGGAGGCGGGTTTA+AGG | - | chr7_1:14518163-14518182 | Msa1010920:intron | 65.0% |
| ! | GGGAGGAGGCGGGTTTAAGG+TGG | - | chr7_1:14518166-14518185 | Msa1010920:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 14516513 | 14521629 | 14516513 | ID=Msa1010920;Name=Msa1010920 |
| chr7_1 | mRNA | 14516513 | 14521629 | 14516513 | ID=Msa1010920-mRNA-1;Parent=Msa1010920;Name=Msa1010920-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|0|0|5|0|513 |
| chr7_1 | exon | 14521457 | 14521629 | 14521457 | ID=Msa1010920-mRNA-1:exon:3769;Parent=Msa1010920-mRNA-1 |
| chr7_1 | exon | 14521266 | 14521424 | 14521266 | ID=Msa1010920-mRNA-1:exon:3768;Parent=Msa1010920-mRNA-1 |
| chr7_1 | exon | 14521045 | 14521199 | 14521045 | ID=Msa1010920-mRNA-1:exon:3767;Parent=Msa1010920-mRNA-1 |
| chr7_1 | exon | 14520831 | 14521020 | 14520831 | ID=Msa1010920-mRNA-1:exon:3766;Parent=Msa1010920-mRNA-1 |
| chr7_1 | exon | 14516513 | 14517377 | 14516513 | ID=Msa1010920-mRNA-1:exon:3765;Parent=Msa1010920-mRNA-1 |
| chr7_1 | CDS | 14521457 | 14521629 | 14521457 | ID=Msa1010920-mRNA-1:cds;Parent=Msa1010920-mRNA-1 |
| chr7_1 | CDS | 14521266 | 14521424 | 14521266 | ID=Msa1010920-mRNA-1:cds;Parent=Msa1010920-mRNA-1 |
| chr7_1 | CDS | 14521045 | 14521199 | 14521045 | ID=Msa1010920-mRNA-1:cds;Parent=Msa1010920-mRNA-1 |
| chr7_1 | CDS | 14520831 | 14521020 | 14520831 | ID=Msa1010920-mRNA-1:cds;Parent=Msa1010920-mRNA-1 |
| chr7_1 | CDS | 14516513 | 14517377 | 14516513 | ID=Msa1010920-mRNA-1:cds;Parent=Msa1010920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
