AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1011730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1011730 MtrunA17_Chr7g0223311 91.512 377 25 4 1 374 1 373 0.0 625
Msa1011730 MtrunA17_Chr4g0010151 38.827 358 184 11 1 347 1 334 1.32e-52 178
Msa1011730 MtrunA17_Chr7g0237921 36.216 370 189 12 1 362 1 331 4.99e-47 163
Msa1011730 MtrunA17_Chr4g0031411 40.850 306 130 12 1 291 1 270 7.43e-47 162
Msa1011730 MtrunA17_Chr2g0328021 39.928 278 96 12 1 274 1 211 1.17e-43 152
Msa1011730 MtrunA17_Chr8g0374251 77.778 63 14 0 78 140 69 131 1.43e-31 122
Msa1011730 MtrunA17_Chr8g0367161 56.044 91 30 1 51 141 16 96 3.64e-30 118
Msa1011730 MtrunA17_Chr8g0374111 59.551 89 29 2 79 161 31 118 4.10e-30 115
Msa1011730 MtrunA17_Chr4g0047001 74.194 62 16 0 78 139 56 117 1.13e-29 117
Msa1011730 MtrunA17_Chr8g0341671 66.667 75 24 1 59 132 1 75 8.26e-29 111
Msa1011730 MtrunA17_Chr3g0117601 58.889 90 32 2 38 127 27 111 9.08e-29 114
Msa1011730 MtrunA17_Chr3g0127201 62.353 85 27 1 47 131 2 81 1.07e-28 113
Msa1011730 MtrunA17_Chr2g0282441 56.311 103 37 2 62 157 11 112 1.11e-28 114
Msa1011730 MtrunA17_Chr3g0126201 47.414 116 50 2 76 191 50 154 1.77e-28 113
Msa1011730 MtrunA17_Chr5g0411951 88.000 50 6 0 78 127 44 93 1.80e-28 113
Msa1011730 MtrunA17_Chr4g0061761 86.538 52 7 0 76 127 39 90 1.82e-28 113
Msa1011730 MtrunA17_Chr4g0030051 83.333 54 9 0 76 129 40 93 5.68e-28 111
Msa1011730 MtrunA17_Chr8g0346551 72.464 69 14 1 79 142 26 94 1.91e-27 109
Msa1011730 MtrunA17_Chr1g0188851 54.217 83 38 0 51 133 17 99 2.79e-27 109
Msa1011730 MtrunA17_Chr2g0326001 78.571 56 12 0 76 131 39 94 5.66e-27 108
Msa1011730 MtrunA17_Chr2g0308011 88.000 50 6 0 76 125 36 85 8.51e-27 105
Msa1011730 MtrunA17_Chr2g0282511 86.000 50 7 0 76 125 44 93 1.94e-26 107
Msa1011730 MtrunA17_Chr1g0177251 79.245 53 11 0 79 131 14 66 4.57e-26 105
Msa1011730 MtrunA17_Chr2g0282051 69.697 66 18 1 69 134 38 101 6.59e-26 105
Msa1011730 MtrunA17_Chr4g0047761 73.770 61 14 1 74 134 69 127 4.93e-25 103
Msa1011730 MtrunA17_Chr6g0453321 76.471 51 12 0 79 129 138 188 1.69e-23 101
Msa1011730 MtrunA17_Chr2g0283811 76.000 50 12 0 79 128 49 98 1.94e-23 95.5
Msa1011730 MtrunA17_Chr4g0042481 56.962 79 23 2 79 157 124 191 8.63e-23 99.4
Msa1011730 MtrunA17_Chr8g0355261 69.811 53 16 0 79 131 120 172 1.17e-22 99.0
Msa1011730 MtrunA17_Chr7g0217581 74.510 51 13 0 79 129 234 284 1.24e-22 99.4
Msa1011730 MtrunA17_Chr3g0092111 67.213 61 16 1 79 139 138 194 1.88e-22 98.6
Msa1011730 MtrunA17_Chr6g0460721 71.154 52 15 0 78 129 90 141 5.85e-22 95.5
Msa1011730 MtrunA17_Chr5g0417571 70.588 51 15 0 79 129 140 190 7.06e-22 95.1
Msa1011730 MtrunA17_Chr7g0254161 67.241 58 18 1 78 135 102 158 1.02e-21 95.9
Msa1011730 MtrunA17_Chr5g0417601 68.966 58 17 1 79 136 142 198 1.32e-21 95.1
Msa1011730 MtrunA17_Chr6g0460731 67.308 52 17 0 78 129 97 148 3.31e-21 94.0
Msa1011730 MtrunA17_Chr5g0417551 45.000 120 51 4 79 192 129 239 3.62e-21 93.6
Msa1011730 MtrunA17_Chr5g0417561 43.548 124 47 4 79 192 121 231 1.28e-20 92.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1011730 AT3G55370.2 37.644 348 147 17 1 325 1 301 6.94e-44 155
Msa1011730 AT3G55370.1 40.138 289 120 13 1 283 1 242 1.47e-42 151
Msa1011730 AT3G55370.3 39.552 268 114 11 17 283 67 287 3.95e-38 140
Msa1011730 AT2G37590.1 49.660 147 58 3 1 133 1 145 2.33e-36 135
Msa1011730 AT1G07640.2 71.951 82 21 1 53 134 55 134 1.88e-34 130
Msa1011730 AT1G07640.1 74.026 77 18 1 58 134 4 78 2.42e-34 128
Msa1011730 AT1G07640.3 71.951 82 21 1 53 134 63 142 2.53e-34 130
Msa1011730 AT2G28810.1 32.642 386 163 12 1 350 1 325 9.47e-33 125
Msa1011730 AT5G02460.1 71.429 77 20 1 55 131 75 149 1.13e-32 126
Msa1011730 AT2G28810.2 35.099 302 129 8 61 350 62 308 1.18e-31 122
Msa1011730 AT1G51700.1 79.032 62 13 0 78 139 34 95 8.48e-31 116
Msa1011730 AT5G60200.1 58.889 90 31 2 76 161 54 141 3.49e-30 116
Msa1011730 AT5G65590.1 80.328 61 12 0 78 138 42 102 4.44e-30 117
Msa1011730 AT5G60850.1 56.250 96 35 2 64 152 35 130 6.26e-30 117
Msa1011730 AT2G28510.1 77.273 66 13 1 73 138 44 107 7.03e-30 116
Msa1011730 AT5G66940.1 52.294 109 45 2 79 180 34 142 1.03e-29 114
Msa1011730 AT1G21340.1 56.322 87 37 1 49 134 9 95 1.45e-29 115
Msa1011730 AT3G21270.1 83.929 56 9 0 78 133 30 85 3.20e-29 112
Msa1011730 AT3G45610.1 51.456 103 39 2 39 141 10 101 1.64e-28 112
Msa1011730 AT5G62940.1 88.235 51 6 0 77 127 73 123 4.34e-28 113
Msa1011730 AT4G38000.1 71.212 66 19 0 78 143 42 107 2.17e-27 108
Msa1011730 AT3G50410.1 75.439 57 14 0 79 135 32 88 3.34e-27 108
Msa1011730 AT1G28310.1 75.439 57 14 0 78 134 28 84 5.27e-27 109
Msa1011730 AT1G28310.2 75.439 57 14 0 78 134 52 108 7.50e-27 109
Msa1011730 AT3G52440.1 57.143 91 32 2 72 162 20 103 8.73e-27 107
Msa1011730 AT3G52440.2 64.474 76 24 2 73 146 40 114 1.28e-26 107
Msa1011730 AT4G21050.1 64.706 68 23 1 76 143 23 89 2.46e-25 102
Msa1011730 AT4G00940.1 58.904 73 30 0 59 131 50 122 2.83e-25 104
Msa1011730 AT4G00940.3 58.904 73 30 0 59 131 50 122 2.83e-25 104
Msa1011730 AT4G00940.2 58.904 73 30 0 59 131 50 122 2.83e-25 104
Msa1011730 AT3G61850.1 62.857 70 26 0 79 148 76 145 2.88e-25 104
Msa1011730 AT3G61850.2 62.857 70 26 0 79 148 64 133 2.94e-25 103
Msa1011730 AT3G61850.3 62.857 70 26 0 79 148 64 133 2.94e-25 103
Msa1011730 AT3G61850.5 62.857 70 26 0 79 148 64 133 3.88e-25 104
Msa1011730 AT3G61850.4 62.857 70 26 0 79 148 76 145 4.07e-25 104
Msa1011730 AT4G24060.1 75.000 56 14 0 76 131 52 107 5.54e-25 104
Msa1011730 AT1G47655.1 75.000 52 13 0 74 125 26 77 3.47e-23 96.7
Msa1011730 AT2G46590.1 84.783 46 7 0 79 124 70 115 4.83e-23 99.4
Msa1011730 AT2G46590.2 84.783 46 7 0 79 124 82 127 5.11e-23 99.4
Msa1011730 AT3G47500.1 74.510 51 13 0 79 129 112 162 6.80e-23 100
Msa1011730 AT1G29160.1 75.472 53 12 1 79 131 64 115 6.85e-23 94.7
Msa1011730 AT2G34140.1 75.472 53 12 1 79 131 60 111 7.40e-23 94.4
Msa1011730 AT1G64620.1 57.895 76 29 1 51 126 26 98 7.61e-23 98.6
Msa1011730 AT1G69570.1 74.510 51 13 0 79 129 134 184 1.88e-22 98.2
Msa1011730 AT5G39660.3 55.000 80 25 2 79 158 140 208 2.85e-22 98.2
Msa1011730 AT5G39660.1 55.000 80 25 2 79 158 140 208 2.85e-22 98.2
Msa1011730 AT5G39660.2 55.000 80 25 2 79 158 140 208 2.85e-22 98.2
Msa1011730 AT5G62430.1 54.167 72 32 1 58 129 36 106 5.06e-22 95.5
Msa1011730 AT4G21040.1 63.077 65 22 1 79 143 27 89 1.22e-21 92.8
Msa1011730 AT1G26790.1 70.588 51 15 0 79 129 113 163 1.63e-21 95.1
Msa1011730 AT4G21080.1 61.538 65 23 1 79 143 27 89 1.25e-20 90.5
Msa1011730 AT4G21030.1 57.692 52 22 0 79 130 23 74 3.24e-14 71.2

Find 103 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAACTTGTCGTCGTTAT+TGG 0.174969 7_1:+16507983 Msa1011730:CDS
GAAATAGTAATGATCTATTT+TGG 0.191335 7_1:+16508688 Msa1011730:CDS
CTAAACTTTGTATTTCTAAA+TGG 0.208729 7_1:+16508976 Msa1011730:three_prime_UTR
CAAAGTGGATTATTTCAATT+TGG 0.211059 7_1:+16508504 Msa1011730:CDS
ATCCTCAAATCTAGTGCTTT+TGG 0.236518 7_1:+16508784 Msa1011730:exon
GCAAATTCTTCTTCTAATAA+TGG 0.247534 7_1:+16508168 Msa1011730:CDS
GTGCTGCTGCAGCATCATTC+TGG 0.303371 7_1:-16507879 None:intergenic
ATTAGTTCACTTGCTAACTA+TGG 0.312768 7_1:+16508884 Msa1011730:three_prime_UTR
CTTGATATTGCGGTAAAATC+AGG 0.337125 7_1:+16509072 Msa1011730:three_prime_UTR
GACCGAAACAAATTTCTTTG+TGG 0.341322 7_1:-16508546 None:intergenic
TGAGGGCATTGGTTCTTTGT+TGG 0.348674 7_1:+16508290 Msa1011730:CDS
CAATTTGGTGGAGAAAATAA+TGG 0.350809 7_1:+16508519 Msa1011730:CDS
TGGAGATGATCGTTATGATT+AGG 0.351307 7_1:-16508105 None:intergenic
CTTGGTAGTGGTTCTTCAAT+TGG 0.353175 7_1:+16508357 Msa1011730:CDS
CAAGGTATAATTAGAGTGTT+AGG 0.368380 7_1:+16508858 Msa1011730:three_prime_UTR
TTTAATCAGCAAGTAGGAAT+TGG 0.368947 7_1:+16507718 Msa1011730:intron
TGATGAACTTGTAGCGAATT+CGG 0.372887 7_1:-16508438 None:intergenic
CAGGTCGGTGCCGGTGCTGC+TGG 0.390469 7_1:+16508126 Msa1011730:CDS
CTGTTGGAGGTGGTTGTAGA+AGG 0.393447 7_1:+16508034 Msa1011730:CDS
AATTGAAATAATCCACTTTG+TGG 0.401490 7_1:-16508501 None:intergenic
AGCCACAAAGAAATTTGTTT+CGG 0.401716 7_1:+16508544 Msa1011730:CDS
CATTGTTCACCAATGCCATT+TGG 0.402281 7_1:-16508408 None:intergenic
GTGTTTGTTGATTCACATCT+TGG 0.421696 7_1:-16507910 None:intergenic
AAGAAATTTGTTTCGGTCGA+AGG 0.427281 7_1:+16508551 Msa1011730:CDS
TTGGGTGGATCTAGATAGAT+TGG 0.437111 7_1:-16507366 None:intergenic
TCTATCTAGATCCACCCAAC+TGG 0.440222 7_1:+16507370 Msa1011730:CDS
TATTCTTCAAGTGTTAGTAT+TGG 0.447776 7_1:+16508579 Msa1011730:CDS
TAACACACACATATAGCTAA+TGG 0.455892 7_1:-16508924 None:intergenic
CAGCAGCACCGGCACCGACC+TGG 0.456075 7_1:-16508125 None:intergenic
AACCAAAAGCACTAGATTTG+AGG 0.456139 7_1:-16508786 None:intergenic
TCAAGTTAATACAGTTAAAG+TGG 0.456282 7_1:+16508611 Msa1011730:CDS
AGTGGATTATTTCAATTTGG+TGG 0.456457 7_1:+16508507 Msa1011730:CDS
GGTTGCAAATTACTCAAGAA+AGG 0.462145 7_1:-16508480 None:intergenic
GTTACAAATGGAAATTGTGT+TGG 0.468460 7_1:-16508231 None:intergenic
CTTCTACAACCACCTCCAAC+AGG 0.475660 7_1:-16508033 None:intergenic
CGAAACGTTCCTGTTGGAGG+TGG 0.475928 7_1:+16508024 Msa1011730:CDS
TCTTCAATTGGTAATGGTAA+TGG 0.476358 7_1:+16508369 Msa1011730:CDS
TCCACCCAACTGGACACAAC+AGG 0.479085 7_1:+16507380 Msa1011730:CDS
CGATGTAAAGAGGTTACAAA+TGG 0.480214 7_1:-16508243 None:intergenic
AGTGGTTCTTCAATTGGTAA+TGG 0.485640 7_1:+16508363 Msa1011730:CDS
GCTCGATCGGTCATTGATAC+TGG 0.489149 7_1:-16507838 None:intergenic
CTTCGAAACGTTCCTGTTGG+AGG 0.496892 7_1:+16508021 Msa1011730:CDS
AGCTATATGTGTGTGTTATG+AGG 0.506294 7_1:+16508929 Msa1011730:three_prime_UTR
CTAGATAGATTGGAAGGGAG+GGG 0.506776 7_1:-16507356 None:intergenic
GTTGAGTTTCAACTTGGTAG+TGG 0.507591 7_1:+16508345 Msa1011730:CDS
ATACTGGTCTTCTAGACCCT+TGG 0.510341 7_1:-16507822 None:intergenic
AGTTATGTTTCTGAGGGCAT+TGG 0.510514 7_1:+16508279 Msa1011730:CDS
GTTGCAAATTACTCAAGAAA+GGG 0.514735 7_1:-16508479 None:intergenic
GGAAATTGTGTTGGAAAATG+AGG 0.514769 7_1:-16508222 None:intergenic
CACTGCGAACCTTGATATTG+CGG 0.516181 7_1:+16509062 Msa1011730:three_prime_UTR
GATCATCTCCAGGTCGGTGC+CGG 0.519214 7_1:+16508117 Msa1011730:CDS
GGCTCTTTGTTGATACCAAA+TGG 0.520108 7_1:+16508393 Msa1011730:CDS
CGACAATAGTTATGTTTCTG+AGG 0.521037 7_1:+16508272 Msa1011730:CDS
GACAATAGTTATGTTTCTGA+GGG 0.522293 7_1:+16508273 Msa1011730:CDS
TATCAATGACCGATCGAGCT+AGG 0.522837 7_1:+16507842 Msa1011730:CDS
ATATTCATCATTCAAAGTTG+TGG 0.522945 7_1:+16509011 Msa1011730:three_prime_UTR
CTGGTGGTTCTAGCTCAGCA+AGG 0.527734 7_1:+16508145 Msa1011730:CDS
TCTAGATAGATTGGAAGGGA+GGG 0.529881 7_1:-16507357 None:intergenic
GAAGCTGATGGCAGCTACCA+AGG 0.530104 7_1:+16507805 Msa1011730:CDS
CAGCAAGTAGGAATTGGTAT+TGG 0.533611 7_1:+16507724 Msa1011730:intron
GCTAGAACCACCAGCAGCAC+CGG 0.537679 7_1:-16508136 None:intergenic
AGTAATTTGCAACCACAAAG+TGG 0.539039 7_1:+16508489 Msa1011730:CDS
CTAACACTCTAATTATACCT+TGG 0.540245 7_1:-16508857 None:intergenic
AATACCTGTTGTGTCCAGTT+GGG 0.542054 7_1:-16507384 None:intergenic
ATCTAGATAGATTGGAAGGG+AGG 0.542287 7_1:-16507358 None:intergenic
GCACTTCGAAACGTTCCTGT+TGG 0.543248 7_1:+16508018 Msa1011730:CDS
ACTTTAACTGTATTAACTTG+AGG 0.543542 7_1:-16508609 None:intergenic
ACCTGTTGTGTCCAGTTGGG+TGG 0.544400 7_1:-16507381 None:intergenic
ACTAATTCTAATGTGAATGT+TGG 0.552195 7_1:+16508195 Msa1011730:CDS
CAAGGTGGTGAAGTGAAACT+AGG 0.554007 7_1:-16508759 None:intergenic
CACTAGATTTGAGGATCACA+AGG 0.554201 7_1:-16508777 None:intergenic
GCTATATGTGTGTGTTATGA+GGG 0.556952 7_1:+16508930 Msa1011730:three_prime_UTR
AAATAATTTAATCAGCAAGT+AGG 0.559549 7_1:+16507712 Msa1011730:intron
GTGGAAGAAAACAATCATCA+AGG 0.560168 7_1:+16508630 Msa1011730:CDS
GTCGCTATGACGATGTAAAG+AGG 0.562338 7_1:-16508253 None:intergenic
GTGGATCTAGATAGATTGGA+AGG 0.563359 7_1:-16507362 None:intergenic
TAATCATAACGATCATCTCC+AGG 0.573464 7_1:+16508107 Msa1011730:CDS
TAAAAGAGAAAGCTTAGCCA+TGG 0.573718 7_1:+16507329 Msa1011730:exon
TGTGTTATGAGGGAAGATAA+AGG 0.574143 7_1:+16508940 Msa1011730:three_prime_UTR
GTCGGTGCCGGTGCTGCTGG+TGG 0.577708 7_1:+16508129 Msa1011730:CDS
GTAGCTGCCATCAGCTTCAA+CGG 0.578179 7_1:-16507800 None:intergenic
TCAATTGGTAATGGTAATGG+TGG 0.579040 7_1:+16508372 Msa1011730:CDS
TAATACCTGTTGTGTCCAGT+TGG 0.582298 7_1:-16507385 None:intergenic
TCGTTATGATTAGGTTTCAG+AGG 0.584218 7_1:-16508096 None:intergenic
CGTCGTTATTGGACTAGAGG+TGG 0.585783 7_1:+16507994 Msa1011730:CDS
TCTGTCACCGTTGAAGCTGA+TGG 0.588932 7_1:+16507793 Msa1011730:CDS
ACTAATGTTGAGTTTCAACT+TGG 0.589155 7_1:+16508339 Msa1011730:CDS
AAGCTGATGGCAGCTACCAA+GGG 0.593247 7_1:+16507806 Msa1011730:CDS
CAAATGGCATTGGTGAACAA+TGG 0.594140 7_1:+16508409 Msa1011730:CDS
TGTCGTCGTTATTGGACTAG+AGG 0.602398 7_1:+16507991 Msa1011730:CDS
CTTTGACATCCTAGCTCGAT+CGG 0.607460 7_1:-16507851 None:intergenic
ATGGCATTGGTGAACAATGG+AGG 0.607659 7_1:+16508412 Msa1011730:CDS
AATGGAAATGGAAATGGAAG+TGG 0.608244 7_1:+16508711 Msa1011730:CDS
GAAGTGGTAATGAAAATGCA+TGG 0.613061 7_1:+16508727 Msa1011730:CDS
TTGTTGATACCAAATGGCAT+TGG 0.626903 7_1:+16508399 Msa1011730:CDS
GATAGCGGTTGCAAAGCTGA+TGG 0.634025 7_1:-16507757 None:intergenic
TGGAAGGGAGGGGAAGACCA+TGG 0.634957 7_1:-16507346 None:intergenic
TGGTGGTTCTAGCTCAGCAA+GGG 0.640666 7_1:+16508146 Msa1011730:CDS
TGGATCTAGATAGATTGGAA+GGG 0.667798 7_1:-16507361 None:intergenic
GACATCGTTGAAGCTGATAG+CGG 0.680206 7_1:-16507772 None:intergenic
CATAACGATCATCTCCAGGT+CGG 0.682152 7_1:+16508111 Msa1011730:CDS
TCATATATAGAAATGATCCA+AGG 0.682468 7_1:+16508840 Msa1011730:three_prime_UTR
TAGATTTGAGGATCACAAGG+TGG 0.736101 7_1:-16508774 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAGTTTTGATGAATTTTT+TGG - chr7_1:16507308-16507327 None:intergenic 15.0%
!!! TATTTTATAACAAAAGTGTA+AGG - chr7_1:16507697-16507716 None:intergenic 15.0%
!!! AAAAGTTTTGATGAATTTTT+TGG - chr7_1:16507308-16507327 None:intergenic 15.0%
!!! TATTTTATAACAAAAGTGTA+AGG - chr7_1:16507697-16507716 None:intergenic 15.0%
!! AGAAAGAAAAAGTGAAAAAA+AGG - chr7_1:16507485-16507504 None:intergenic 20.0%
!! AAATAATTTAATCAGCAAGT+AGG + chr7_1:16507712-16507731 Msa1011730:intron 20.0%
!!! GAAATAGTAATGATCTATTT+TGG + chr7_1:16508688-16508707 Msa1011730:CDS 20.0%
!!! CTAAACTTTGTATTTCTAAA+TGG + chr7_1:16508976-16508995 Msa1011730:three_prime_UTR 20.0%
!! AGAAAGAAAAAGTGAAAAAA+AGG - chr7_1:16507485-16507504 None:intergenic 20.0%
!! AAATAATTTAATCAGCAAGT+AGG + chr7_1:16507712-16507731 Msa1011730:intron 20.0%
!!! GAAATAGTAATGATCTATTT+TGG + chr7_1:16508688-16508707 Msa1011730:CDS 20.0%
!!! CTAAACTTTGTATTTCTAAA+TGG + chr7_1:16508976-16508995 Msa1011730:three_prime_UTR 20.0%
! CAAAGATGGAAAAAAGATAA+AGG - chr7_1:16507217-16507236 None:intergenic 25.0%
! AGAAAAAGTGATAACAAAGA+TGG - chr7_1:16507231-16507250 None:intergenic 25.0%
! GCAAATTCTTCTTCTAATAA+TGG + chr7_1:16508168-16508187 Msa1011730:CDS 25.0%
! ACTAATTCTAATGTGAATGT+TGG + chr7_1:16508195-16508214 Msa1011730:CDS 25.0%
!! AGTACTATTGCTCATATTTT+TGG - chr7_1:16508316-16508335 None:intergenic 25.0%
! AATTGAAATAATCCACTTTG+TGG - chr7_1:16508504-16508523 None:intergenic 25.0%
!!! CAAAGTGGATTATTTCAATT+TGG + chr7_1:16508504-16508523 Msa1011730:CDS 25.0%
! TATTCTTCAAGTGTTAGTAT+TGG + chr7_1:16508579-16508598 Msa1011730:CDS 25.0%
!! ACTTTAACTGTATTAACTTG+AGG - chr7_1:16508612-16508631 None:intergenic 25.0%
! TCAAGTTAATACAGTTAAAG+TGG + chr7_1:16508611-16508630 Msa1011730:CDS 25.0%
!!! AGTAATGATCTATTTTGGAA+TGG + chr7_1:16508693-16508712 Msa1011730:CDS 25.0%
!!! GCTTTTGGTTTCTTAATTAA+TGG + chr7_1:16508799-16508818 Msa1011730:three_prime_UTR 25.0%
! TCATATATAGAAATGATCCA+AGG + chr7_1:16508840-16508859 Msa1011730:three_prime_UTR 25.0%
! ATATTCATCATTCAAAGTTG+TGG + chr7_1:16509011-16509030 Msa1011730:three_prime_UTR 25.0%
! CAAAGATGGAAAAAAGATAA+AGG - chr7_1:16507217-16507236 None:intergenic 25.0%
! AGAAAAAGTGATAACAAAGA+TGG - chr7_1:16507231-16507250 None:intergenic 25.0%
! GCAAATTCTTCTTCTAATAA+TGG + chr7_1:16508168-16508187 Msa1011730:CDS 25.0%
! ACTAATTCTAATGTGAATGT+TGG + chr7_1:16508195-16508214 Msa1011730:CDS 25.0%
!! AGTACTATTGCTCATATTTT+TGG - chr7_1:16508316-16508335 None:intergenic 25.0%
! AATTGAAATAATCCACTTTG+TGG - chr7_1:16508504-16508523 None:intergenic 25.0%
!!! CAAAGTGGATTATTTCAATT+TGG + chr7_1:16508504-16508523 Msa1011730:CDS 25.0%
! TATTCTTCAAGTGTTAGTAT+TGG + chr7_1:16508579-16508598 Msa1011730:CDS 25.0%
!! ACTTTAACTGTATTAACTTG+AGG - chr7_1:16508612-16508631 None:intergenic 25.0%
! TCAAGTTAATACAGTTAAAG+TGG + chr7_1:16508611-16508630 Msa1011730:CDS 25.0%
!!! AGTAATGATCTATTTTGGAA+TGG + chr7_1:16508693-16508712 Msa1011730:CDS 25.0%
!!! GCTTTTGGTTTCTTAATTAA+TGG + chr7_1:16508799-16508818 Msa1011730:three_prime_UTR 25.0%
! TCATATATAGAAATGATCCA+AGG + chr7_1:16508840-16508859 Msa1011730:three_prime_UTR 25.0%
! ATATTCATCATTCAAAGTTG+TGG + chr7_1:16509011-16509030 Msa1011730:three_prime_UTR 25.0%
AGATTGATTATAGTGTGTGT+AGG - chr7_1:16507563-16507582 None:intergenic 30.0%
TTTAATCAGCAAGTAGGAAT+TGG + chr7_1:16507718-16507737 Msa1011730:intron 30.0%
GTTACAAATGGAAATTGTGT+TGG - chr7_1:16508234-16508253 None:intergenic 30.0%
! GACAATAGTTATGTTTCTGA+GGG + chr7_1:16508273-16508292 Msa1011730:CDS 30.0%
ACTAATGTTGAGTTTCAACT+TGG + chr7_1:16508339-16508358 Msa1011730:CDS 30.0%
!! TCTTCAATTGGTAATGGTAA+TGG + chr7_1:16508369-16508388 Msa1011730:CDS 30.0%
GTTGCAAATTACTCAAGAAA+GGG - chr7_1:16508482-16508501 None:intergenic 30.0%
!! AGTGGATTATTTCAATTTGG+TGG + chr7_1:16508507-16508526 Msa1011730:CDS 30.0%
! CAATTTGGTGGAGAAAATAA+TGG + chr7_1:16508519-16508538 Msa1011730:CDS 30.0%
! AGCCACAAAGAAATTTGTTT+CGG + chr7_1:16508544-16508563 Msa1011730:CDS 30.0%
TTGCCAAAAAATCTCTTGAA+TGG + chr7_1:16508660-16508679 Msa1011730:CDS 30.0%
!!! GAACCATTCAAGAGATTTTT+TGG - chr7_1:16508666-16508685 None:intergenic 30.0%
AAAAATCTCTTGAATGGTTC+AGG + chr7_1:16508666-16508685 Msa1011730:CDS 30.0%
!!! GATCTATTTTGGAATGGAAA+TGG + chr7_1:16508699-16508718 Msa1011730:CDS 30.0%
!!! TTTTGGAATGGAAATGGAAA+TGG + chr7_1:16508705-16508724 Msa1011730:CDS 30.0%
CTAACACTCTAATTATACCT+TGG - chr7_1:16508860-16508879 None:intergenic 30.0%
! CAAGGTATAATTAGAGTGTT+AGG + chr7_1:16508858-16508877 Msa1011730:three_prime_UTR 30.0%
! ATTAGTTCACTTGCTAACTA+TGG + chr7_1:16508884-16508903 Msa1011730:three_prime_UTR 30.0%
TAACACACACATATAGCTAA+TGG - chr7_1:16508927-16508946 None:intergenic 30.0%
AGATTGATTATAGTGTGTGT+AGG - chr7_1:16507563-16507582 None:intergenic 30.0%
TTTAATCAGCAAGTAGGAAT+TGG + chr7_1:16507718-16507737 Msa1011730:intron 30.0%
GTTACAAATGGAAATTGTGT+TGG - chr7_1:16508234-16508253 None:intergenic 30.0%
! GACAATAGTTATGTTTCTGA+GGG + chr7_1:16508273-16508292 Msa1011730:CDS 30.0%
ACTAATGTTGAGTTTCAACT+TGG + chr7_1:16508339-16508358 Msa1011730:CDS 30.0%
!! TCTTCAATTGGTAATGGTAA+TGG + chr7_1:16508369-16508388 Msa1011730:CDS 30.0%
GTTGCAAATTACTCAAGAAA+GGG - chr7_1:16508482-16508501 None:intergenic 30.0%
!! AGTGGATTATTTCAATTTGG+TGG + chr7_1:16508507-16508526 Msa1011730:CDS 30.0%
! CAATTTGGTGGAGAAAATAA+TGG + chr7_1:16508519-16508538 Msa1011730:CDS 30.0%
! AGCCACAAAGAAATTTGTTT+CGG + chr7_1:16508544-16508563 Msa1011730:CDS 30.0%
TTGCCAAAAAATCTCTTGAA+TGG + chr7_1:16508660-16508679 Msa1011730:CDS 30.0%
!!! GAACCATTCAAGAGATTTTT+TGG - chr7_1:16508666-16508685 None:intergenic 30.0%
AAAAATCTCTTGAATGGTTC+AGG + chr7_1:16508666-16508685 Msa1011730:CDS 30.0%
!!! GATCTATTTTGGAATGGAAA+TGG + chr7_1:16508699-16508718 Msa1011730:CDS 30.0%
!!! TTTTGGAATGGAAATGGAAA+TGG + chr7_1:16508705-16508724 Msa1011730:CDS 30.0%
CTAACACTCTAATTATACCT+TGG - chr7_1:16508860-16508879 None:intergenic 30.0%
! CAAGGTATAATTAGAGTGTT+AGG + chr7_1:16508858-16508877 Msa1011730:three_prime_UTR 30.0%
! ATTAGTTCACTTGCTAACTA+TGG + chr7_1:16508884-16508903 Msa1011730:three_prime_UTR 30.0%
TAACACACACATATAGCTAA+TGG - chr7_1:16508927-16508946 None:intergenic 30.0%
TAAAAGAGAAAGCTTAGCCA+TGG + chr7_1:16507329-16507348 Msa1011730:exon 35.0%
TGGATCTAGATAGATTGGAA+GGG - chr7_1:16507364-16507383 None:intergenic 35.0%
!! GTGTTTGTTGATTCACATCT+TGG - chr7_1:16507913-16507932 None:intergenic 35.0%
! GACGACAAGTTTTGCAAAAA+TGG - chr7_1:16507978-16507997 None:intergenic 35.0%
TCGTTATGATTAGGTTTCAG+AGG - chr7_1:16508099-16508118 None:intergenic 35.0%
TGGAGATGATCGTTATGATT+AGG - chr7_1:16508108-16508127 None:intergenic 35.0%
TAATCATAACGATCATCTCC+AGG + chr7_1:16508107-16508126 Msa1011730:CDS 35.0%
GGAAATTGTGTTGGAAAATG+AGG - chr7_1:16508225-16508244 None:intergenic 35.0%
CGATGTAAAGAGGTTACAAA+TGG - chr7_1:16508246-16508265 None:intergenic 35.0%
! CGACAATAGTTATGTTTCTG+AGG + chr7_1:16508272-16508291 Msa1011730:CDS 35.0%
AGTGGTTCTTCAATTGGTAA+TGG + chr7_1:16508363-16508382 Msa1011730:CDS 35.0%
!! TCAATTGGTAATGGTAATGG+TGG + chr7_1:16508372-16508391 Msa1011730:CDS 35.0%
TTGTTGATACCAAATGGCAT+TGG + chr7_1:16508399-16508418 Msa1011730:CDS 35.0%
TGATGAACTTGTAGCGAATT+CGG - chr7_1:16508441-16508460 None:intergenic 35.0%
GGTTGCAAATTACTCAAGAA+AGG - chr7_1:16508483-16508502 None:intergenic 35.0%
! AGTAATTTGCAACCACAAAG+TGG + chr7_1:16508489-16508508 Msa1011730:CDS 35.0%
GACCGAAACAAATTTCTTTG+TGG - chr7_1:16508549-16508568 None:intergenic 35.0%
! AAGAAATTTGTTTCGGTCGA+AGG + chr7_1:16508551-16508570 Msa1011730:CDS 35.0%
GTGGAAGAAAACAATCATCA+AGG + chr7_1:16508630-16508649 Msa1011730:CDS 35.0%
AATGGAAATGGAAATGGAAG+TGG + chr7_1:16508711-16508730 Msa1011730:CDS 35.0%
! GAAGTGGTAATGAAAATGCA+TGG + chr7_1:16508727-16508746 Msa1011730:CDS 35.0%
! ATCCTCAAATCTAGTGCTTT+TGG + chr7_1:16508784-16508803 Msa1011730:exon 35.0%
!! AACCAAAAGCACTAGATTTG+AGG - chr7_1:16508789-16508808 None:intergenic 35.0%
AGCTATATGTGTGTGTTATG+AGG + chr7_1:16508929-16508948 Msa1011730:three_prime_UTR 35.0%
GCTATATGTGTGTGTTATGA+GGG + chr7_1:16508930-16508949 Msa1011730:three_prime_UTR 35.0%
TGTGTTATGAGGGAAGATAA+AGG + chr7_1:16508940-16508959 Msa1011730:three_prime_UTR 35.0%
! CTGATTTTACCGCAATATCA+AGG - chr7_1:16509074-16509093 None:intergenic 35.0%
CTTGATATTGCGGTAAAATC+AGG + chr7_1:16509072-16509091 Msa1011730:three_prime_UTR 35.0%
TAAAAGAGAAAGCTTAGCCA+TGG + chr7_1:16507329-16507348 Msa1011730:exon 35.0%
TGGATCTAGATAGATTGGAA+GGG - chr7_1:16507364-16507383 None:intergenic 35.0%
!! GTGTTTGTTGATTCACATCT+TGG - chr7_1:16507913-16507932 None:intergenic 35.0%
! GACGACAAGTTTTGCAAAAA+TGG - chr7_1:16507978-16507997 None:intergenic 35.0%
TCGTTATGATTAGGTTTCAG+AGG - chr7_1:16508099-16508118 None:intergenic 35.0%
TGGAGATGATCGTTATGATT+AGG - chr7_1:16508108-16508127 None:intergenic 35.0%
TAATCATAACGATCATCTCC+AGG + chr7_1:16508107-16508126 Msa1011730:CDS 35.0%
GGAAATTGTGTTGGAAAATG+AGG - chr7_1:16508225-16508244 None:intergenic 35.0%
CGATGTAAAGAGGTTACAAA+TGG - chr7_1:16508246-16508265 None:intergenic 35.0%
! CGACAATAGTTATGTTTCTG+AGG + chr7_1:16508272-16508291 Msa1011730:CDS 35.0%
AGTGGTTCTTCAATTGGTAA+TGG + chr7_1:16508363-16508382 Msa1011730:CDS 35.0%
!! TCAATTGGTAATGGTAATGG+TGG + chr7_1:16508372-16508391 Msa1011730:CDS 35.0%
TTGTTGATACCAAATGGCAT+TGG + chr7_1:16508399-16508418 Msa1011730:CDS 35.0%
TGATGAACTTGTAGCGAATT+CGG - chr7_1:16508441-16508460 None:intergenic 35.0%
GGTTGCAAATTACTCAAGAA+AGG - chr7_1:16508483-16508502 None:intergenic 35.0%
! AGTAATTTGCAACCACAAAG+TGG + chr7_1:16508489-16508508 Msa1011730:CDS 35.0%
GACCGAAACAAATTTCTTTG+TGG - chr7_1:16508549-16508568 None:intergenic 35.0%
! AAGAAATTTGTTTCGGTCGA+AGG + chr7_1:16508551-16508570 Msa1011730:CDS 35.0%
GTGGAAGAAAACAATCATCA+AGG + chr7_1:16508630-16508649 Msa1011730:CDS 35.0%
AATGGAAATGGAAATGGAAG+TGG + chr7_1:16508711-16508730 Msa1011730:CDS 35.0%
! GAAGTGGTAATGAAAATGCA+TGG + chr7_1:16508727-16508746 Msa1011730:CDS 35.0%
! ATCCTCAAATCTAGTGCTTT+TGG + chr7_1:16508784-16508803 Msa1011730:exon 35.0%
!! AACCAAAAGCACTAGATTTG+AGG - chr7_1:16508789-16508808 None:intergenic 35.0%
AGCTATATGTGTGTGTTATG+AGG + chr7_1:16508929-16508948 Msa1011730:three_prime_UTR 35.0%
GCTATATGTGTGTGTTATGA+GGG + chr7_1:16508930-16508949 Msa1011730:three_prime_UTR 35.0%
TGTGTTATGAGGGAAGATAA+AGG + chr7_1:16508940-16508959 Msa1011730:three_prime_UTR 35.0%
! CTGATTTTACCGCAATATCA+AGG - chr7_1:16509074-16509093 None:intergenic 35.0%
CTTGATATTGCGGTAAAATC+AGG + chr7_1:16509072-16509091 Msa1011730:three_prime_UTR 35.0%
TCTAGATAGATTGGAAGGGA+GGG - chr7_1:16507360-16507379 None:intergenic 40.0%
ATCTAGATAGATTGGAAGGG+AGG - chr7_1:16507361-16507380 None:intergenic 40.0%
GTGGATCTAGATAGATTGGA+AGG - chr7_1:16507365-16507384 None:intergenic 40.0%
TTGGGTGGATCTAGATAGAT+TGG - chr7_1:16507369-16507388 None:intergenic 40.0%
AATACCTGTTGTGTCCAGTT+GGG - chr7_1:16507387-16507406 None:intergenic 40.0%
TAATACCTGTTGTGTCCAGT+TGG - chr7_1:16507388-16507407 None:intergenic 40.0%
CAGCAAGTAGGAATTGGTAT+TGG + chr7_1:16507724-16507743 Msa1011730:intron 40.0%
! CAAGTTTTGCAAAAATGGCG+TGG - chr7_1:16507973-16507992 None:intergenic 40.0%
GCAAAACTTGTCGTCGTTAT+TGG + chr7_1:16507983-16508002 Msa1011730:CDS 40.0%
! AGTTATGTTTCTGAGGGCAT+TGG + chr7_1:16508279-16508298 Msa1011730:CDS 40.0%
GTTGAGTTTCAACTTGGTAG+TGG + chr7_1:16508345-16508364 Msa1011730:CDS 40.0%
!! CTTGGTAGTGGTTCTTCAAT+TGG + chr7_1:16508357-16508376 Msa1011730:CDS 40.0%
GGCTCTTTGTTGATACCAAA+TGG + chr7_1:16508393-16508412 Msa1011730:CDS 40.0%
CATTGTTCACCAATGCCATT+TGG - chr7_1:16508411-16508430 None:intergenic 40.0%
!! CAAATGGCATTGGTGAACAA+TGG + chr7_1:16508409-16508428 Msa1011730:CDS 40.0%
TAGATTTGAGGATCACAAGG+TGG - chr7_1:16508777-16508796 None:intergenic 40.0%
CACTAGATTTGAGGATCACA+AGG - chr7_1:16508780-16508799 None:intergenic 40.0%
TCTAGATAGATTGGAAGGGA+GGG - chr7_1:16507360-16507379 None:intergenic 40.0%
ATCTAGATAGATTGGAAGGG+AGG - chr7_1:16507361-16507380 None:intergenic 40.0%
GTGGATCTAGATAGATTGGA+AGG - chr7_1:16507365-16507384 None:intergenic 40.0%
TTGGGTGGATCTAGATAGAT+TGG - chr7_1:16507369-16507388 None:intergenic 40.0%
AATACCTGTTGTGTCCAGTT+GGG - chr7_1:16507387-16507406 None:intergenic 40.0%
TAATACCTGTTGTGTCCAGT+TGG - chr7_1:16507388-16507407 None:intergenic 40.0%
CAGCAAGTAGGAATTGGTAT+TGG + chr7_1:16507724-16507743 Msa1011730:intron 40.0%
! CAAGTTTTGCAAAAATGGCG+TGG - chr7_1:16507973-16507992 None:intergenic 40.0%
GCAAAACTTGTCGTCGTTAT+TGG + chr7_1:16507983-16508002 Msa1011730:CDS 40.0%
! AGTTATGTTTCTGAGGGCAT+TGG + chr7_1:16508279-16508298 Msa1011730:CDS 40.0%
GTTGAGTTTCAACTTGGTAG+TGG + chr7_1:16508345-16508364 Msa1011730:CDS 40.0%
!! CTTGGTAGTGGTTCTTCAAT+TGG + chr7_1:16508357-16508376 Msa1011730:CDS 40.0%
GGCTCTTTGTTGATACCAAA+TGG + chr7_1:16508393-16508412 Msa1011730:CDS 40.0%
CATTGTTCACCAATGCCATT+TGG - chr7_1:16508411-16508430 None:intergenic 40.0%
!! CAAATGGCATTGGTGAACAA+TGG + chr7_1:16508409-16508428 Msa1011730:CDS 40.0%
TAGATTTGAGGATCACAAGG+TGG - chr7_1:16508777-16508796 None:intergenic 40.0%
CACTAGATTTGAGGATCACA+AGG - chr7_1:16508780-16508799 None:intergenic 40.0%
GGATATGTGTGTGTGTGTGT+GGG - chr7_1:16507287-16507306 None:intergenic 45.0%
TGGATATGTGTGTGTGTGTG+TGG - chr7_1:16507288-16507307 None:intergenic 45.0%
CTAGATAGATTGGAAGGGAG+GGG - chr7_1:16507359-16507378 None:intergenic 45.0%
TCTATCTAGATCCACCCAAC+TGG + chr7_1:16507370-16507389 Msa1011730:CDS 45.0%
GACATCGTTGAAGCTGATAG+CGG - chr7_1:16507775-16507794 None:intergenic 45.0%
!! ATACTGGTCTTCTAGACCCT+TGG - chr7_1:16507825-16507844 None:intergenic 45.0%
TATCAATGACCGATCGAGCT+AGG + chr7_1:16507842-16507861 Msa1011730:CDS 45.0%
CTTTGACATCCTAGCTCGAT+CGG - chr7_1:16507854-16507873 None:intergenic 45.0%
! TGTCGTCGTTATTGGACTAG+AGG + chr7_1:16507991-16508010 Msa1011730:CDS 45.0%
CATAACGATCATCTCCAGGT+CGG + chr7_1:16508111-16508130 Msa1011730:CDS 45.0%
GTCGCTATGACGATGTAAAG+AGG - chr7_1:16508256-16508275 None:intergenic 45.0%
!! TGAGGGCATTGGTTCTTTGT+TGG + chr7_1:16508290-16508309 Msa1011730:CDS 45.0%
!! ATGGCATTGGTGAACAATGG+AGG + chr7_1:16508412-16508431 Msa1011730:CDS 45.0%
CAAGGTGGTGAAGTGAAACT+AGG - chr7_1:16508762-16508781 None:intergenic 45.0%
CACTGCGAACCTTGATATTG+CGG + chr7_1:16509062-16509081 Msa1011730:three_prime_UTR 45.0%
GGATATGTGTGTGTGTGTGT+GGG - chr7_1:16507287-16507306 None:intergenic 45.0%
TGGATATGTGTGTGTGTGTG+TGG - chr7_1:16507288-16507307 None:intergenic 45.0%
CTAGATAGATTGGAAGGGAG+GGG - chr7_1:16507359-16507378 None:intergenic 45.0%
TCTATCTAGATCCACCCAAC+TGG + chr7_1:16507370-16507389 Msa1011730:CDS 45.0%
GACATCGTTGAAGCTGATAG+CGG - chr7_1:16507775-16507794 None:intergenic 45.0%
!! ATACTGGTCTTCTAGACCCT+TGG - chr7_1:16507825-16507844 None:intergenic 45.0%
TATCAATGACCGATCGAGCT+AGG + chr7_1:16507842-16507861 Msa1011730:CDS 45.0%
CTTTGACATCCTAGCTCGAT+CGG - chr7_1:16507854-16507873 None:intergenic 45.0%
! TGTCGTCGTTATTGGACTAG+AGG + chr7_1:16507991-16508010 Msa1011730:CDS 45.0%
CATAACGATCATCTCCAGGT+CGG + chr7_1:16508111-16508130 Msa1011730:CDS 45.0%
GTCGCTATGACGATGTAAAG+AGG - chr7_1:16508256-16508275 None:intergenic 45.0%
!! TGAGGGCATTGGTTCTTTGT+TGG + chr7_1:16508290-16508309 Msa1011730:CDS 45.0%
!! ATGGCATTGGTGAACAATGG+AGG + chr7_1:16508412-16508431 Msa1011730:CDS 45.0%
CAAGGTGGTGAAGTGAAACT+AGG - chr7_1:16508762-16508781 None:intergenic 45.0%
CACTGCGAACCTTGATATTG+CGG + chr7_1:16509062-16509081 Msa1011730:three_prime_UTR 45.0%
TATGTGTGTGTGTGTGTGGG+TGG - chr7_1:16507284-16507303 None:intergenic 50.0%
! GATAGCGGTTGCAAAGCTGA+TGG - chr7_1:16507760-16507779 None:intergenic 50.0%
TCTGTCACCGTTGAAGCTGA+TGG + chr7_1:16507793-16507812 Msa1011730:CDS 50.0%
GTAGCTGCCATCAGCTTCAA+CGG - chr7_1:16507803-16507822 None:intergenic 50.0%
AAGCTGATGGCAGCTACCAA+GGG + chr7_1:16507806-16507825 Msa1011730:CDS 50.0%
GCTCGATCGGTCATTGATAC+TGG - chr7_1:16507841-16507860 None:intergenic 50.0%
! CGTCGTTATTGGACTAGAGG+TGG + chr7_1:16507994-16508013 Msa1011730:CDS 50.0%
GCACTTCGAAACGTTCCTGT+TGG + chr7_1:16508018-16508037 Msa1011730:CDS 50.0%
CTTCGAAACGTTCCTGTTGG+AGG + chr7_1:16508021-16508040 Msa1011730:CDS 50.0%
CTTCTACAACCACCTCCAAC+AGG - chr7_1:16508036-16508055 None:intergenic 50.0%
CTGTTGGAGGTGGTTGTAGA+AGG + chr7_1:16508034-16508053 Msa1011730:CDS 50.0%
!! TGGTGGTTCTAGCTCAGCAA+GGG + chr7_1:16508146-16508165 Msa1011730:CDS 50.0%
TATGTGTGTGTGTGTGTGGG+TGG - chr7_1:16507284-16507303 None:intergenic 50.0%
! GATAGCGGTTGCAAAGCTGA+TGG - chr7_1:16507760-16507779 None:intergenic 50.0%
TCTGTCACCGTTGAAGCTGA+TGG + chr7_1:16507793-16507812 Msa1011730:CDS 50.0%
GTAGCTGCCATCAGCTTCAA+CGG - chr7_1:16507803-16507822 None:intergenic 50.0%
AAGCTGATGGCAGCTACCAA+GGG + chr7_1:16507806-16507825 Msa1011730:CDS 50.0%
GCTCGATCGGTCATTGATAC+TGG - chr7_1:16507841-16507860 None:intergenic 50.0%
! CGTCGTTATTGGACTAGAGG+TGG + chr7_1:16507994-16508013 Msa1011730:CDS 50.0%
GCACTTCGAAACGTTCCTGT+TGG + chr7_1:16508018-16508037 Msa1011730:CDS 50.0%
CTTCGAAACGTTCCTGTTGG+AGG + chr7_1:16508021-16508040 Msa1011730:CDS 50.0%
CTTCTACAACCACCTCCAAC+AGG - chr7_1:16508036-16508055 None:intergenic 50.0%
CTGTTGGAGGTGGTTGTAGA+AGG + chr7_1:16508034-16508053 Msa1011730:CDS 50.0%
!! TGGTGGTTCTAGCTCAGCAA+GGG + chr7_1:16508146-16508165 Msa1011730:CDS 50.0%
TCCACCCAACTGGACACAAC+AGG + chr7_1:16507380-16507399 Msa1011730:CDS 55.0%
ACCTGTTGTGTCCAGTTGGG+TGG - chr7_1:16507384-16507403 None:intergenic 55.0%
GAAGCTGATGGCAGCTACCA+AGG + chr7_1:16507805-16507824 Msa1011730:CDS 55.0%
! GTGCTGCTGCAGCATCATTC+TGG - chr7_1:16507882-16507901 None:intergenic 55.0%
CGAAACGTTCCTGTTGGAGG+TGG + chr7_1:16508024-16508043 Msa1011730:CDS 55.0%
!! CTGGTGGTTCTAGCTCAGCA+AGG + chr7_1:16508145-16508164 Msa1011730:CDS 55.0%
TCCACCCAACTGGACACAAC+AGG + chr7_1:16507380-16507399 Msa1011730:CDS 55.0%
ACCTGTTGTGTCCAGTTGGG+TGG - chr7_1:16507384-16507403 None:intergenic 55.0%
GAAGCTGATGGCAGCTACCA+AGG + chr7_1:16507805-16507824 Msa1011730:CDS 55.0%
! GTGCTGCTGCAGCATCATTC+TGG - chr7_1:16507882-16507901 None:intergenic 55.0%
CGAAACGTTCCTGTTGGAGG+TGG + chr7_1:16508024-16508043 Msa1011730:CDS 55.0%
!! CTGGTGGTTCTAGCTCAGCA+AGG + chr7_1:16508145-16508164 Msa1011730:CDS 55.0%
TGGAAGGGAGGGGAAGACCA+TGG - chr7_1:16507349-16507368 None:intergenic 60.0%
GATCATCTCCAGGTCGGTGC+CGG + chr7_1:16508117-16508136 Msa1011730:CDS 60.0%
GCTAGAACCACCAGCAGCAC+CGG - chr7_1:16508139-16508158 None:intergenic 60.0%
TGGAAGGGAGGGGAAGACCA+TGG - chr7_1:16507349-16507368 None:intergenic 60.0%
GATCATCTCCAGGTCGGTGC+CGG + chr7_1:16508117-16508136 Msa1011730:CDS 60.0%
GCTAGAACCACCAGCAGCAC+CGG - chr7_1:16508139-16508158 None:intergenic 60.0%
!! CAGCAGCACCGGCACCGACC+TGG - chr7_1:16508128-16508147 None:intergenic 75.0%
!! CAGGTCGGTGCCGGTGCTGC+TGG + chr7_1:16508126-16508145 Msa1011730:CDS 75.0%
!! GTCGGTGCCGGTGCTGCTGG+TGG + chr7_1:16508129-16508148 Msa1011730:CDS 75.0%
!! CAGCAGCACCGGCACCGACC+TGG - chr7_1:16508128-16508147 None:intergenic 75.0%
!! CAGGTCGGTGCCGGTGCTGC+TGG + chr7_1:16508126-16508145 Msa1011730:CDS 75.0%
!! GTCGGTGCCGGTGCTGCTGG+TGG + chr7_1:16508129-16508148 Msa1011730:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 16507214 16509100 16507214 ID=Msa1011730;Name=Msa1011730
chr7_1 mRNA 16507214 16509100 16507214 ID=Msa1011730-mRNA-1;Parent=Msa1011730;Name=Msa1011730-mRNA-1;_AED=0.00;_eAED=0.00;_QI=134|1|1|1|1|1|2|303|374
chr7_1 exon 16507214 16507401 16507214 ID=Msa1011730-mRNA-1:exon:4202;Parent=Msa1011730-mRNA-1
chr7_1 exon 16507727 16509100 16507727 ID=Msa1011730-mRNA-1:exon:4203;Parent=Msa1011730-mRNA-1
chr7_1 five_prime_UTR 16507214 16507347 16507214 ID=Msa1011730-mRNA-1:five_prime_utr;Parent=Msa1011730-mRNA-1
chr7_1 CDS 16507348 16507401 16507348 ID=Msa1011730-mRNA-1:cds;Parent=Msa1011730-mRNA-1
chr7_1 CDS 16507727 16508797 16507727 ID=Msa1011730-mRNA-1:cds;Parent=Msa1011730-mRNA-1
chr7_1 three_prime_UTR 16508798 16509100 16508798 ID=Msa1011730-mRNA-1:three_prime_utr;Parent=Msa1011730-mRNA-1
Gene Sequence

>Msa1011730

ATGGTCTTCCCCTCCCTTCCAATCTATCTAGATCCACCCAACTGGACACAACAGCAAGTAGGAATTGGTATTGGTGATCAAAATCCATCAGCTTTGCAACCGCTATCAGCTTCAACGATGTCTGTCACCGTTGAAGCTGATGGCAGCTACCAAGGGTCTAGAAGACCAGTATCAATGACCGATCGAGCTAGGATGTCAAAGATACACCAGAATGATGCTGCAGCAGCACAGAAATGTCCAAGATGTGAATCAACAAACACAAAGTTCTGTTACTACAACAACTACAATCTTTCACAACCACGCCATTTTTGCAAAACTTGTCGTCGTTATTGGACTAGAGGTGGTGCACTTCGAAACGTTCCTGTTGGAGGTGGTTGTAGAAGGAACAACAAAAGAAGAAAAAGTAATTCAGCATCAAAATCACCTCTGAAACCTAATCATAACGATCATCTCCAGGTCGGTGCCGGTGCTGCTGGTGGTTCTAGCTCAGCAAGGGCAAATTCTTCTTCTAATAATGGTTGCACTAATTCTAATGTGAATGTTGGAATGCCTCATTTTCCAACACAATTTCCATTTGTAACCTCTTTACATCGTCATAGCGACAATAGTTATGTTTCTGAGGGCATTGGTTCTTTGTTGGCCAAAAATATGAGCAATAGTACTACAACTAATGTTGAGTTTCAACTTGGTAGTGGTTCTTCAATTGGTAATGGTAATGGTGGCTCTTTGTTGATACCAAATGGCATTGGTGAACAATGGAGGTTTCCGAATTCGCTACAAGTTCATCAACAACAATATCAACAATTCCCTTTCTTGAGTAATTTGCAACCACAAAGTGGATTATTTCAATTTGGTGGAGAAAATAATGGAGAGCCACAAAGAAATTTGTTTCGGTCGAAGGAAACATATTCTTCAAGTGTTAGTATTGGAATGATGCCTCAAGTTAATACAGTTAAAGTGGAAGAAAACAATCATCAAGGTTTGAGTTTGCCAAAAAATCTCTTGAATGGTTCAGGAAATAGTAATGATCTATTTTGGAATGGAAATGGAAATGGAAGTGGTAATGAAAATGCATGGAATGAAGTTCCTAGTTTCACTTCACCACCTTGTGATCCTCAAATCTAG
Protein sequence

>Msa1011730

MVFPSLPIYLDPPNWTQQQVGIGIGDQNPSALQPLSASTMSVTVEADGSYQGSRRPVSMTDRARMSKIHQNDAAAAQKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNNKRRKSNSASKSPLKPNHNDHLQVGAGAAGGSSSARANSSSNNGCTNSNVNVGMPHFPTQFPFVTSLHRHSDNSYVSEGIGSLLAKNMSNSTTTNVEFQLGSGSSIGNGNGGSLLIPNGIGEQWRFPNSLQVHQQQYQQFPFLSNLQPQSGLFQFGGENNGEPQRNLFRSKETYSSSVSIGMMPQVNTVKVEENNHQGLSLPKNLLNGSGNSNDLFWNGNGNGSGNENAWNEVPSFTSPPCDPQI*