Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011910 | XP_024626123.1 | 89.435 | 407 | 26 | 2 | 1 | 391 | 1 | 406 | 0.0 | 729 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011910 | sp|Q6X7J4|WOX9_ARATH | 64.800 | 125 | 32 | 2 | 1 | 115 | 1 | 123 | 1.05e-46 | 167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011910 | U5LKY5 | 89.435 | 407 | 26 | 2 | 1 | 391 | 1 | 406 | 0.0 | 729 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1011910 | TF | HB-WOX |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011910 | MtrunA17_Chr7g0223471 | 89.435 | 407 | 26 | 2 | 1 | 391 | 1 | 406 | 0.0 | 729 |
| Msa1011910 | MtrunA17_Chr4g0046231 | 56.609 | 348 | 106 | 6 | 66 | 390 | 1 | 326 | 1.51e-110 | 327 |
| Msa1011910 | MtrunA17_Chr2g0283141 | 41.355 | 428 | 191 | 14 | 1 | 390 | 1 | 406 | 1.49e-78 | 249 |
| Msa1011910 | MtrunA17_Chr4g0046241 | 63.291 | 158 | 49 | 1 | 163 | 320 | 1 | 149 | 1.70e-60 | 193 |
| Msa1011910 | MtrunA17_Chr4g0046251 | 65.672 | 67 | 23 | 0 | 324 | 390 | 19 | 85 | 2.78e-25 | 98.2 |
| Msa1011910 | MtrunA17_Chr6g0460691 | 65.000 | 60 | 21 | 0 | 39 | 98 | 24 | 83 | 7.30e-23 | 97.8 |
| Msa1011910 | MtrunA17_Chr7g0254251 | 68.333 | 60 | 19 | 0 | 37 | 96 | 18 | 77 | 7.99e-23 | 97.1 |
| Msa1011910 | MtrunA17_Chr4g0043891 | 45.714 | 70 | 38 | 0 | 42 | 111 | 3 | 72 | 2.91e-17 | 80.9 |
| Msa1011910 | MtrunA17_Chr5g0436661 | 41.250 | 80 | 47 | 0 | 29 | 108 | 15 | 94 | 4.47e-16 | 75.9 |
| Msa1011910 | MtrunA17_Chr8g0392991 | 50.000 | 62 | 31 | 0 | 47 | 108 | 96 | 157 | 5.59e-16 | 78.6 |
| Msa1011910 | MtrunA17_Chr5g0405351 | 48.438 | 64 | 32 | 1 | 47 | 109 | 30 | 93 | 5.48e-15 | 75.1 |
| Msa1011910 | MtrunA17_Chr1g0212511 | 42.857 | 77 | 40 | 1 | 30 | 106 | 72 | 144 | 2.45e-14 | 72.4 |
| Msa1011910 | MtrunA17_Chr4g0031341 | 45.161 | 62 | 34 | 0 | 47 | 108 | 25 | 86 | 1.97e-13 | 69.7 |
| Msa1011910 | MtrunA17_Chr1g0153171 | 46.774 | 62 | 33 | 0 | 47 | 108 | 90 | 151 | 2.88e-13 | 68.9 |
| Msa1011910 | MtrunA17_Chr3g0144021 | 44.444 | 63 | 35 | 0 | 45 | 107 | 80 | 142 | 4.47e-13 | 68.2 |
| Msa1011910 | MtrunA17_Chr7g0238431 | 41.096 | 73 | 43 | 0 | 41 | 113 | 2 | 74 | 1.01e-12 | 66.6 |
| Msa1011910 | MtrunA17_Chr7g0222981 | 40.625 | 64 | 38 | 0 | 45 | 108 | 66 | 129 | 6.24e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011910 | AT2G33880.1 | 64.800 | 125 | 32 | 2 | 1 | 115 | 1 | 123 | 1.06e-47 | 167 |
| Msa1011910 | AT2G33880.2 | 64.800 | 125 | 32 | 2 | 1 | 115 | 1 | 123 | 1.31e-47 | 167 |
| Msa1011910 | AT5G45980.1 | 53.125 | 128 | 52 | 1 | 1 | 120 | 1 | 128 | 9.25e-41 | 147 |
| Msa1011910 | AT3G03660.1 | 70.370 | 54 | 16 | 0 | 45 | 98 | 31 | 84 | 3.48e-22 | 95.5 |
| Msa1011910 | AT3G03660.2 | 70.370 | 54 | 16 | 0 | 45 | 98 | 31 | 84 | 6.25e-22 | 95.5 |
| Msa1011910 | AT3G03660.4 | 67.797 | 59 | 18 | 1 | 41 | 98 | 26 | 84 | 7.83e-22 | 95.1 |
| Msa1011910 | AT3G03660.3 | 67.797 | 59 | 18 | 1 | 41 | 98 | 26 | 84 | 1.33e-21 | 95.1 |
| Msa1011910 | AT5G17810.3 | 68.519 | 54 | 17 | 0 | 45 | 98 | 19 | 72 | 3.04e-21 | 92.8 |
| Msa1011910 | AT5G17810.1 | 68.519 | 54 | 17 | 0 | 45 | 98 | 19 | 72 | 3.16e-21 | 92.8 |
| Msa1011910 | AT5G17810.2 | 68.519 | 54 | 17 | 0 | 45 | 98 | 19 | 72 | 3.16e-21 | 92.8 |
| Msa1011910 | AT5G05770.1 | 40.000 | 75 | 45 | 0 | 47 | 121 | 29 | 103 | 3.56e-15 | 72.0 |
| Msa1011910 | AT3G18010.1 | 38.384 | 99 | 52 | 2 | 47 | 145 | 76 | 165 | 3.76e-15 | 76.6 |
| Msa1011910 | AT3G11260.1 | 45.312 | 64 | 35 | 0 | 47 | 110 | 24 | 87 | 1.66e-14 | 71.6 |
| Msa1011910 | AT2G17950.1 | 48.438 | 64 | 32 | 1 | 47 | 109 | 38 | 101 | 2.97e-14 | 73.2 |
| Msa1011910 | AT4G35550.1 | 46.032 | 63 | 34 | 0 | 45 | 107 | 97 | 159 | 3.24e-14 | 72.8 |
| Msa1011910 | AT1G46480.2 | 46.774 | 62 | 33 | 0 | 47 | 108 | 90 | 151 | 8.06e-14 | 70.1 |
| Msa1011910 | AT1G20700.2 | 44.444 | 63 | 35 | 0 | 45 | 107 | 31 | 93 | 1.46e-13 | 68.2 |
| Msa1011910 | AT1G20700.1 | 44.444 | 63 | 35 | 0 | 45 | 107 | 93 | 155 | 2.79e-13 | 68.9 |
| Msa1011910 | AT1G20700.3 | 44.444 | 63 | 35 | 0 | 45 | 107 | 93 | 155 | 3.04e-13 | 68.6 |
| Msa1011910 | AT1G46480.1 | 46.774 | 62 | 33 | 0 | 47 | 108 | 90 | 151 | 3.64e-13 | 69.3 |
| Msa1011910 | AT2G28610.1 | 42.647 | 68 | 39 | 0 | 41 | 108 | 2 | 69 | 1.55e-12 | 67.4 |
| Msa1011910 | AT5G59340.1 | 41.935 | 62 | 36 | 0 | 47 | 108 | 14 | 75 | 1.88e-12 | 67.4 |
| Msa1011910 | AT2G01500.1 | 40.506 | 79 | 39 | 1 | 31 | 101 | 37 | 115 | 3.59e-12 | 66.6 |
| Msa1011910 | AT5G46010.1 | 46.154 | 65 | 34 | 1 | 43 | 106 | 50 | 114 | 1.25e-11 | 61.6 |
Find 101 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCATCTTGGCTTTGGTTC+TGG | 0.191744 | 7_1:-16725368 | None:intergenic |
| CAAGACCCACAACTTAATTT+TGG | 0.218741 | 7_1:+16726121 | Msa1011910:CDS |
| ATGAACTATGGAAGTGTTAA+TGG | 0.219154 | 7_1:+16725929 | Msa1011910:CDS |
| CATAGGTTTAATCACTTATC+TGG | 0.257497 | 7_1:+16725902 | Msa1011910:CDS |
| CACCATCCCTGAGTTGAAAA+TGG | 0.259677 | 7_1:-16725423 | None:intergenic |
| AAAGGATGCACGAACGTTAA+AGG | 0.277456 | 7_1:-16726730 | None:intergenic |
| AATAAGCATCAACTTGGTTT+TGG | 0.278040 | 7_1:-16725769 | None:intergenic |
| TTATCTGGTTTCATGAACTA+TGG | 0.293987 | 7_1:+16725917 | Msa1011910:CDS |
| ATTGCAATTTCTAACAATAT+CGG | 0.309550 | 7_1:+16725686 | Msa1011910:CDS |
| AATTAAGTTGTGGGTCTTGC+TGG | 0.313309 | 7_1:-16726117 | None:intergenic |
| GGGTGTAGGTTGTTGTAAAT+TGG | 0.318996 | 7_1:-16725810 | None:intergenic |
| TTTGGGTTCCATCTTGGCTT+TGG | 0.323964 | 7_1:-16725374 | None:intergenic |
| TGCGAATTTGTTGTGGCTTT+GGG | 0.325891 | 7_1:-16725391 | None:intergenic |
| ATGCGAATTTGTTGTGGCTT+TGG | 0.336580 | 7_1:-16725392 | None:intergenic |
| TGTGGCTTTGGGTTCCATCT+TGG | 0.346409 | 7_1:-16725380 | None:intergenic |
| CTCAACTCGTCTCTCTTAAC+TGG | 0.358193 | 7_1:+16724412 | Msa1011910:CDS |
| TTTAACGTTCGTGCATCCTT+TGG | 0.359074 | 7_1:+16726732 | Msa1011910:CDS |
| CGTGAACAATTACAAGAGTT+TGG | 0.359135 | 7_1:+16725476 | Msa1011910:CDS |
| ATCTTCGTAATTTCCTCCCT+TGG | 0.380246 | 7_1:-16725452 | None:intergenic |
| TACTAAGGACGCCTCATTCA+TGG | 0.386072 | 7_1:+16726695 | Msa1011910:CDS |
| TCATCATCGTCATCTTCTTC+CGG | 0.409764 | 7_1:+16725638 | Msa1011910:CDS |
| TCCAGTTCTAACCGATGAAT+GGG | 0.412999 | 7_1:+16726788 | Msa1011910:CDS |
| TGTGGTGTTGTCATGGCATT+AGG | 0.415749 | 7_1:-16725881 | None:intergenic |
| GGATTCTCCAATGCTAATGA+TGG | 0.428470 | 7_1:+16725707 | Msa1011910:CDS |
| TCAGGATTTGGCGTGGAAGA+TGG | 0.430982 | 7_1:+16726651 | Msa1011910:intron |
| CCCCATTCATCGGTTAGAAC+TGG | 0.431005 | 7_1:-16726789 | None:intergenic |
| TTAGAAATTGCAATTTCATC+GGG | 0.433675 | 7_1:-16725677 | None:intergenic |
| GCCTTGAGAATTCCGTTGGT+TGG | 0.439358 | 7_1:-16724389 | None:intergenic |
| TTCGTAATTTCCTCCCTTGG+TGG | 0.441626 | 7_1:-16725449 | None:intergenic |
| GTTGTAAATTGGTTTCAGTC+GGG | 0.445592 | 7_1:-16725799 | None:intergenic |
| CCATGGTGCTACTTATTACC+TGG | 0.446959 | 7_1:+16726833 | Msa1011910:CDS |
| AAGGATGCACGAACGTTAAA+GGG | 0.448612 | 7_1:-16726729 | None:intergenic |
| TTCTAATTCACCCGCAGTCT+CGG | 0.450061 | 7_1:+16725742 | Msa1011910:CDS |
| CTCCAGTTCTAACCGATGAA+TGG | 0.457716 | 7_1:+16726787 | Msa1011910:CDS |
| CGCCTCATTCATGGTTGATG+TGG | 0.462527 | 7_1:+16726704 | Msa1011910:CDS |
| GCAGTTCTCTTTGACTCCTC+TGG | 0.463999 | 7_1:+16726762 | Msa1011910:CDS |
| GCCTCATTCATGGTTGATGT+GGG | 0.464076 | 7_1:+16726705 | Msa1011910:CDS |
| CCTCTTCCTCCGACTACCAT+TGG | 0.468440 | 7_1:+16726190 | Msa1011910:CDS |
| TGTTGTAAATTGGTTTCAGT+CGG | 0.471150 | 7_1:-16725800 | None:intergenic |
| TCGTAATTTCCTCCCTTGGT+GGG | 0.478421 | 7_1:-16725448 | None:intergenic |
| GAATCTTCTCTTGATCATAT+CGG | 0.481992 | 7_1:-16726063 | None:intergenic |
| GTTAGAAATTGCAATTTCAT+CGG | 0.486033 | 7_1:-16725678 | None:intergenic |
| CTCCAGAACCAAAGCCAAGA+TGG | 0.487752 | 7_1:+16725366 | Msa1011910:CDS |
| GTGTTTCTCGTTTCTTGTTG+TGG | 0.496273 | 7_1:-16725574 | None:intergenic |
| TCATTAATATGATTGTCCAC+AGG | 0.502055 | 7_1:-16725848 | None:intergenic |
| CCAATGGTAGTCGGAGGAAG+AGG | 0.504535 | 7_1:-16726190 | None:intergenic |
| ATTCCGTTGGTTGGACGCAT+TGG | 0.507387 | 7_1:-16724380 | None:intergenic |
| CAACACCAAAATTAAGTTGT+GGG | 0.508001 | 7_1:-16726126 | None:intergenic |
| AATTGCAATTTCATCGGGAG+AGG | 0.513925 | 7_1:-16725672 | None:intergenic |
| AAATATTGTTTAGGTGGAGA+TGG | 0.518896 | 7_1:+16725332 | Msa1011910:intron |
| CACCATCCCATCATTAGCAT+TGG | 0.520729 | 7_1:-16725714 | None:intergenic |
| ATCATATCGGTCATCAATTG+AGG | 0.527269 | 7_1:-16726050 | None:intergenic |
| TTGAAACCAGTAAAAGACAT+TGG | 0.529718 | 7_1:-16725513 | None:intergenic |
| GAAGATGACGATGATGAGTT+GGG | 0.532960 | 7_1:-16725632 | None:intergenic |
| TGAGGCCTTGAGAATTCCGT+TGG | 0.536803 | 7_1:-16724393 | None:intergenic |
| AGGTAAGGGTTGAACCATTG+AGG | 0.538283 | 7_1:-16725957 | None:intergenic |
| TCGAGAATGCGAATTTGTTG+TGG | 0.542611 | 7_1:-16725398 | None:intergenic |
| AGAAGATGACGATGATGAGT+TGG | 0.545042 | 7_1:-16725633 | None:intergenic |
| CATTAATATGATTGTCCACA+GGG | 0.550563 | 7_1:-16725847 | None:intergenic |
| GCTAGGCCAATGTTTGTTCG+AGG | 0.550853 | 7_1:-16724341 | None:intergenic |
| TGTTAATGGAAGCTCCTCAA+TGG | 0.556181 | 7_1:+16725943 | Msa1011910:CDS |
| TTACAAGAGTTTGGTCAAGT+TGG | 0.556243 | 7_1:+16725485 | Msa1011910:CDS |
| CCCCACATCAACCATGAATG+AGG | 0.565657 | 7_1:-16726706 | None:intergenic |
| ACCATGGTGGAGCGAATCGA+GGG | 0.568055 | 7_1:-16726817 | None:intergenic |
| GTAGACTTCTTGAACATGCT+AGG | 0.571860 | 7_1:-16724358 | None:intergenic |
| TTGTAAATTGGTTTCAGTCG+GGG | 0.572771 | 7_1:-16725798 | None:intergenic |
| TGGCTTCCTCGAACAAACAT+TGG | 0.573120 | 7_1:+16724335 | Msa1011910:CDS |
| CGAGAAACACAACAAAACTC+TGG | 0.574956 | 7_1:+16725587 | Msa1011910:CDS |
| GCAACACCAAAATTAAGTTG+TGG | 0.576573 | 7_1:-16726127 | None:intergenic |
| TTTGTTTGCTTCTAGACTTG+CGG | 0.582777 | 7_1:-16725538 | None:intergenic |
| AAACCTATGTGGTGTTGTCA+TGG | 0.586615 | 7_1:-16725888 | None:intergenic |
| GATTCTCCAATGCTAATGAT+GGG | 0.589822 | 7_1:+16725708 | Msa1011910:CDS |
| CACCATGGTGGAGCGAATCG+AGG | 0.590019 | 7_1:-16726818 | None:intergenic |
| AAAATGTACTGTGATTACTA+AGG | 0.592453 | 7_1:+16726680 | Msa1011910:CDS |
| CTCCAATGCTAATGATGGGA+TGG | 0.594670 | 7_1:+16725712 | Msa1011910:CDS |
| AATATGATTGTCCACAGGGA+AGG | 0.596021 | 7_1:-16725843 | None:intergenic |
| TCCAACCAACGGAATTCTCA+AGG | 0.602756 | 7_1:+16724388 | Msa1011910:CDS |
| GAGAACTGCTCGATCTCCAA+AGG | 0.604797 | 7_1:-16726748 | None:intergenic |
| CTACCAATGCGTCCAACCAA+CGG | 0.608541 | 7_1:+16724377 | Msa1011910:CDS |
| GATAAGTGATTAAACCTATG+TGG | 0.608582 | 7_1:-16725899 | None:intergenic |
| TGTGAAAATAAGCATCAACT+TGG | 0.611249 | 7_1:-16725775 | None:intergenic |
| GAGGGTAATACCCCATTCAT+CGG | 0.616236 | 7_1:-16726799 | None:intergenic |
| TGATCAAGAGAAGATTCAAG+AGG | 0.626315 | 7_1:+16726069 | Msa1011910:CDS |
| CAGTTAAGAGAGACGAGTTG+AGG | 0.631435 | 7_1:-16724411 | None:intergenic |
| GATGGTGAACCCACCAAGGG+AGG | 0.632998 | 7_1:+16725439 | Msa1011910:CDS |
| ACAGCTGCACCAATGGTAGT+CGG | 0.640634 | 7_1:-16726199 | None:intergenic |
| ATGCCATGACAACACCACAT+AGG | 0.641572 | 7_1:+16725885 | Msa1011910:CDS |
| ATTTGGCGTGGAAGATGGAG+CGG | 0.645210 | 7_1:+16726656 | Msa1011910:CDS |
| CAGGGATGGTGAACCCACCA+AGG | 0.647061 | 7_1:+16725435 | Msa1011910:CDS |
| GGTAATAAGTAGCACCATGG+TGG | 0.650858 | 7_1:-16726830 | None:intergenic |
| CAATGCTAATGATGGGATGG+TGG | 0.652306 | 7_1:+16725715 | Msa1011910:CDS |
| CCTCATTCATGGTTGATGTG+GGG | 0.657797 | 7_1:+16726706 | Msa1011910:CDS |
| ATGAGCTCATGATTAACTAG+AGG | 0.665512 | 7_1:-16725998 | None:intergenic |
| AGGGATGGTGAACCCACCAA+GGG | 0.665906 | 7_1:+16725436 | Msa1011910:CDS |
| ACCCTCGATTCGCTCCACCA+TGG | 0.678106 | 7_1:+16726816 | Msa1011910:CDS |
| CCAGTTCTAACCGATGAATG+GGG | 0.690715 | 7_1:+16726789 | Msa1011910:CDS |
| GCTGCACCAATGGTAGTCGG+AGG | 0.691529 | 7_1:-16726196 | None:intergenic |
| GGTTAGAACTGGAGTACCAG+AGG | 0.692890 | 7_1:-16726778 | None:intergenic |
| GTGTTTGTCAGGATTTGGCG+TGG | 0.696978 | 7_1:+16726644 | Msa1011910:intron |
| CCAGGTAATAAGTAGCACCA+TGG | 0.700447 | 7_1:-16726833 | None:intergenic |
| GATGACGATGATGAGTTGGG+TGG | 0.712576 | 7_1:-16725629 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATAATAATAAGTAGA+GGG | - | chr7_1:16724451-16724470 | None:intergenic | 10.0% |
| !! | TAAATAATAATAATAAGTAG+AGG | - | chr7_1:16724452-16724471 | None:intergenic | 10.0% |
| !!! | TACATAATATTTTTTTTTTG+TGG | - | chr7_1:16724925-16724944 | None:intergenic | 10.0% |
| !!! | TAATATTTCTATAAAACAAT+TGG | - | chr7_1:16725055-16725074 | None:intergenic | 10.0% |
| !!! | ATTTGAAAGTTTAGATTTTT+AGG | + | chr7_1:16724682-16724701 | Msa1011910:intron | 15.0% |
| !!! | TTTGAAAGTTTAGATTTTTA+GGG | + | chr7_1:16724683-16724702 | Msa1011910:intron | 15.0% |
| !!! | TATTTTGTTTTTTCTTTTTC+AGG | + | chr7_1:16728021-16728040 | Msa1011910:intron | 15.0% |
| !!! | AATTTTAAATCGATTCGTTT+AGG | - | chr7_1:16724665-16724684 | None:intergenic | 20.0% |
| !!! | TTGTTTTAATGTATACACTA+CGG | + | chr7_1:16724993-16725012 | Msa1011910:intron | 20.0% |
| !! | GAAATATTATAATACACCAT+AGG | + | chr7_1:16725066-16725085 | Msa1011910:intron | 20.0% |
| !!! | TATAGAAGTATCATAATACT+CGG | + | chr7_1:16725233-16725252 | Msa1011910:intron | 20.0% |
| !!! | GCTTTTAACAAATATTGTTT+AGG | + | chr7_1:16725323-16725342 | Msa1011910:intron | 20.0% |
| !! | TTTAACAAATATTGTTTAGG+TGG | + | chr7_1:16725326-16725345 | Msa1011910:intron | 20.0% |
| !! | ATTGCAATTTCTAACAATAT+CGG | + | chr7_1:16725686-16725705 | Msa1011910:CDS | 20.0% |
| !! | ATGAACTATGTAAGTAAAAA+TGG | + | chr7_1:16726022-16726041 | Msa1011910:CDS | 20.0% |
| !!! | AACTTAGTTTGAATTTTAGT+TGG | + | chr7_1:16726342-16726361 | Msa1011910:intron | 20.0% |
| !! | GTTCAATATTAATTGTATGT+TGG | - | chr7_1:16727111-16727130 | None:intergenic | 20.0% |
| !! | AAACTAATTTAAGAAAATGC+AGG | - | chr7_1:16727959-16727978 | None:intergenic | 20.0% |
| ! | TTTGATTAGATCTAACACAT+AGG | - | chr7_1:16724487-16724506 | None:intergenic | 25.0% |
| !! | TGAGTTTATAGTCATTGATT+TGG | - | chr7_1:16724533-16724552 | None:intergenic | 25.0% |
| !!! | TTTAGGTTTTTTCTATGTTG+GGG | - | chr7_1:16724648-16724667 | None:intergenic | 25.0% |
| !!! | GTTTAGGTTTTTTCTATGTT+GGG | - | chr7_1:16724649-16724668 | None:intergenic | 25.0% |
| ! | GCTAAAATTTGATCTATACT+CGG | + | chr7_1:16724705-16724724 | Msa1011910:intron | 25.0% |
| ! | TGAAAATATAATTGCTCGAA+CGG | - | chr7_1:16724770-16724789 | None:intergenic | 25.0% |
| !!! | TATTTTTTTTTTGTGGTGAC+CGG | - | chr7_1:16724918-16724937 | None:intergenic | 25.0% |
| ! | TTAGAAATTGCAATTTCATC+GGG | - | chr7_1:16725680-16725699 | None:intergenic | 25.0% |
| ! | GTTAGAAATTGCAATTTCAT+CGG | - | chr7_1:16725681-16725700 | None:intergenic | 25.0% |
| !!! | TTTTTGTTGTTTTATCCATC+TGG | - | chr7_1:16726443-16726462 | None:intergenic | 25.0% |
| !! | TACCTGGAACTTTAAATTTT+GGG | - | chr7_1:16726520-16726539 | None:intergenic | 25.0% |
| !! | ATACCTGGAACTTTAAATTT+TGG | - | chr7_1:16726521-16726540 | None:intergenic | 25.0% |
| ! | TAATAAAACGAAATCATACC+TGG | - | chr7_1:16726536-16726555 | None:intergenic | 25.0% |
| !!! | TTTCGTTTTATTATATCCCA+CGG | + | chr7_1:16726543-16726562 | Msa1011910:intron | 25.0% |
| ! | AAAATGTACTGTGATTACTA+AGG | + | chr7_1:16726680-16726699 | Msa1011910:CDS | 25.0% |
| ! | TAAACAAAGCAGATGTTATA+AGG | - | chr7_1:16726870-16726889 | None:intergenic | 25.0% |
| ! | ACCAGTGTATATGATTATAA+GGG | + | chr7_1:16726902-16726921 | Msa1011910:intron | 25.0% |
| !! | TCACATGACAATAATTTTAC+CGG | - | chr7_1:16726941-16726960 | None:intergenic | 25.0% |
| !! | AAAGAAGTGTGTTAAAAAGT+AGG | + | chr7_1:16727198-16727217 | Msa1011910:intron | 25.0% |
| ! | AATATATTATACACCTAGCT+AGG | + | chr7_1:16727390-16727409 | Msa1011910:intron | 25.0% |
| ! | ATAGTCTCTTACCATAAAAA+TGG | - | chr7_1:16727566-16727585 | None:intergenic | 25.0% |
| !!! | TTTTTAGGATTTCACAGTTT+TGG | + | chr7_1:16727673-16727692 | Msa1011910:intron | 25.0% |
| !!! | CTTCCAAACACAATTTTTTT+TGG | + | chr7_1:16727926-16727945 | Msa1011910:intron | 25.0% |
| !!! | CGTTTAGGTTTTTTCTATGT+TGG | - | chr7_1:16724650-16724669 | None:intergenic | 30.0% |
| !!! | ATTTTTTTTTTGTGGTGACC+GGG | - | chr7_1:16724917-16724936 | None:intergenic | 30.0% |
| TTATCTTCATCTGTTTGCTT+TGG | - | chr7_1:16725027-16725046 | None:intergenic | 30.0% | |
| GTAAACTACAATATGACCTA+TGG | - | chr7_1:16725085-16725104 | None:intergenic | 30.0% | |
| GTAAACTTAGCATGTTTGAT+TGG | + | chr7_1:16725301-16725320 | Msa1011910:intron | 30.0% | |
| AAATATTGTTTAGGTGGAGA+TGG | + | chr7_1:16725332-16725351 | Msa1011910:intron | 30.0% | |
| TTGAAACCAGTAAAAGACAT+TGG | - | chr7_1:16725516-16725535 | None:intergenic | 30.0% | |
| ! | AATAAGCATCAACTTGGTTT+TGG | - | chr7_1:16725772-16725791 | None:intergenic | 30.0% |
| TGTGAAAATAAGCATCAACT+TGG | - | chr7_1:16725778-16725797 | None:intergenic | 30.0% | |
| ! | TGTTGTAAATTGGTTTCAGT+CGG | - | chr7_1:16725803-16725822 | None:intergenic | 30.0% |
| CATTAATATGATTGTCCACA+GGG | - | chr7_1:16725850-16725869 | None:intergenic | 30.0% | |
| TCATTAATATGATTGTCCAC+AGG | - | chr7_1:16725851-16725870 | None:intergenic | 30.0% | |
| GATAAGTGATTAAACCTATG+TGG | - | chr7_1:16725902-16725921 | None:intergenic | 30.0% | |
| CATAGGTTTAATCACTTATC+TGG | + | chr7_1:16725902-16725921 | Msa1011910:CDS | 30.0% | |
| ! | TTATCTGGTTTCATGAACTA+TGG | + | chr7_1:16725917-16725936 | Msa1011910:CDS | 30.0% |
| !! | ATGAACTATGGAAGTGTTAA+TGG | + | chr7_1:16725929-16725948 | Msa1011910:CDS | 30.0% |
| ! | TCAACATTTTGTTGAGGTAA+GGG | - | chr7_1:16725974-16725993 | None:intergenic | 30.0% |
| ! | ATCAACATTTTGTTGAGGTA+AGG | - | chr7_1:16725975-16725994 | None:intergenic | 30.0% |
| GAATCTTCTCTTGATCATAT+CGG | - | chr7_1:16726066-16726085 | None:intergenic | 30.0% | |
| ! | CAACACCAAAATTAAGTTGT+GGG | - | chr7_1:16726129-16726148 | None:intergenic | 30.0% |
| !! | TGACGTTGATGATCAATAAT+GGG | - | chr7_1:16726238-16726257 | None:intergenic | 30.0% |
| !! | TTGACGTTGATGATCAATAA+TGG | - | chr7_1:16726239-16726258 | None:intergenic | 30.0% |
| ATTATTGATCATCAACGTCA+AGG | + | chr7_1:16726238-16726257 | Msa1011910:intron | 30.0% | |
| ! | TTTTCTTTTGTGTGTTTGTC+AGG | + | chr7_1:16726633-16726652 | Msa1011910:intron | 30.0% |
| CACCAGTGTATATGATTATA+AGG | + | chr7_1:16726901-16726920 | Msa1011910:intron | 30.0% | |
| TCCCTTATAATCATATACAC+TGG | - | chr7_1:16726906-16726925 | None:intergenic | 30.0% | |
| TCATGTGACTAAAAATTCAC+AGG | + | chr7_1:16726953-16726972 | Msa1011910:intron | 30.0% | |
| AAAATTCACAGGTTAGAGTT+CGG | + | chr7_1:16726964-16726983 | Msa1011910:intron | 30.0% | |
| AATGCTTGCAATGAATAAGA+GGG | - | chr7_1:16727291-16727310 | None:intergenic | 30.0% | |
| CATATGGTAAGCTACAATAA+AGG | - | chr7_1:16727429-16727448 | None:intergenic | 30.0% | |
| TAATCATATCACAACTCAAG+TGG | + | chr7_1:16727641-16727660 | Msa1011910:intron | 30.0% | |
| AATCATATCACAACTCAAGT+GGG | + | chr7_1:16727642-16727661 | Msa1011910:intron | 30.0% | |
| ! | AAGTGGGTGTCTATATTTTT+AGG | + | chr7_1:16727658-16727677 | Msa1011910:intron | 30.0% |
| AATGATATCATGAGTGCTTT+AGG | + | chr7_1:16727709-16727728 | Msa1011910:intron | 30.0% | |
| ATGATATCATGAGTGCTTTA+GGG | + | chr7_1:16727710-16727729 | Msa1011910:intron | 30.0% | |
| ACAGGTTATAATTGTATAGC+GGG | - | chr7_1:16727755-16727774 | None:intergenic | 30.0% | |
| GACAGGTTATAATTGTATAG+CGG | - | chr7_1:16727756-16727775 | None:intergenic | 30.0% | |
| TATAACCTGTCTTTGTTCAA+TGG | + | chr7_1:16727765-16727784 | Msa1011910:intron | 30.0% | |
| GTGCCAAAAAAAATTGTGTT+TGG | - | chr7_1:16727932-16727951 | None:intergenic | 30.0% | |
| CAAAACGACTTACATTGATG+TGG | + | chr7_1:16724563-16724582 | Msa1011910:intron | 35.0% | |
| !!! | TGATGTGGTTTTTTCCATGT+CGG | + | chr7_1:16724578-16724597 | Msa1011910:intron | 35.0% |
| GACAACGCATAAAATATGCA+AGG | + | chr7_1:16724877-16724896 | Msa1011910:intron | 35.0% | |
| !!! | TTTTTTTTTTGTGGTGACCG+GGG | - | chr7_1:16724916-16724935 | None:intergenic | 35.0% |
| CGTGAACAATTACAAGAGTT+TGG | + | chr7_1:16725476-16725495 | Msa1011910:CDS | 35.0% | |
| TTACAAGAGTTTGGTCAAGT+TGG | + | chr7_1:16725485-16725504 | Msa1011910:CDS | 35.0% | |
| TTTGTTTGCTTCTAGACTTG+CGG | - | chr7_1:16725541-16725560 | None:intergenic | 35.0% | |
| GATTCTCCAATGCTAATGAT+GGG | + | chr7_1:16725708-16725727 | Msa1011910:CDS | 35.0% | |
| ! | TTGTAAATTGGTTTCAGTCG+GGG | - | chr7_1:16725801-16725820 | None:intergenic | 35.0% |
| ! | GTTGTAAATTGGTTTCAGTC+GGG | - | chr7_1:16725802-16725821 | None:intergenic | 35.0% |
| ! | GGTACATCAACATTTTGTTG+AGG | - | chr7_1:16725980-16725999 | None:intergenic | 35.0% |
| ATGAGCTCATGATTAACTAG+AGG | - | chr7_1:16726001-16726020 | None:intergenic | 35.0% | |
| ATCATATCGGTCATCAATTG+AGG | - | chr7_1:16726053-16726072 | None:intergenic | 35.0% | |
| TGATCAAGAGAAGATTCAAG+AGG | + | chr7_1:16726069-16726088 | Msa1011910:CDS | 35.0% | |
| ! | CAAGACCCACAACTTAATTT+TGG | + | chr7_1:16726121-16726140 | Msa1011910:CDS | 35.0% |
| ! | GCAACACCAAAATTAAGTTG+TGG | - | chr7_1:16726130-16726149 | None:intergenic | 35.0% |
| ! | TGATGATCAATAATGGGGAA+TGG | - | chr7_1:16726232-16726251 | None:intergenic | 35.0% |
| !! | GACGTTGATGATCAATAATG+GGG | - | chr7_1:16726237-16726256 | None:intergenic | 35.0% |
| ! | CACCCAAAATTTAAAGTTCC+AGG | + | chr7_1:16726515-16726534 | Msa1011910:intron | 35.0% |
| TTTGTGTGTTTGTCAGGATT+TGG | + | chr7_1:16726639-16726658 | Msa1011910:intron | 35.0% | |
| TATAAGGAAAAATACGCACC+AGG | - | chr7_1:16726854-16726873 | None:intergenic | 35.0% | |
| ! | ATAATTTTACCGGTGTGTCA+AGG | - | chr7_1:16726931-16726950 | None:intergenic | 35.0% |
| AAATTCACAGGTTAGAGTTC+GGG | + | chr7_1:16726965-16726984 | Msa1011910:intron | 35.0% | |
| ! | ATATAACCTTTTTACCCCAG+AGG | - | chr7_1:16726998-16727017 | None:intergenic | 35.0% |
| TAAAACAAGATGTGCAAAGC+AGG | + | chr7_1:16727078-16727097 | Msa1011910:intron | 35.0% | |
| TATCTCTCTTGTTAGTGTAG+TGG | - | chr7_1:16727144-16727163 | None:intergenic | 35.0% | |
| AGATAATTAGAGCAGTGATG+TGG | - | chr7_1:16727234-16727253 | None:intergenic | 35.0% | |
| CAATGCTTGCAATGAATAAG+AGG | - | chr7_1:16727292-16727311 | None:intergenic | 35.0% | |
| ATTATACACCTAGCTAGGTT+AGG | + | chr7_1:16727395-16727414 | Msa1011910:intron | 35.0% | |
| ! | AATGACTTGTGTCCAATAGT+CGG | - | chr7_1:16727483-16727502 | None:intergenic | 35.0% |
| CATTGTTCACACATAACACA+TGG | + | chr7_1:16727499-16727518 | Msa1011910:intron | 35.0% | |
| TTCACACATAACACATGGAT+TGG | + | chr7_1:16727504-16727523 | Msa1011910:intron | 35.0% | |
| TCACACATAACACATGGATT+GGG | + | chr7_1:16727505-16727524 | Msa1011910:intron | 35.0% | |
| !! | TGCACATGCATCCATTTTTA+TGG | + | chr7_1:16727552-16727571 | Msa1011910:intron | 35.0% |
| CAAAGCGATGTCTAAAAACA+CGG | - | chr7_1:16727621-16727640 | None:intergenic | 35.0% | |
| TGTATCCATTGAACAAAGAC+AGG | - | chr7_1:16727773-16727792 | None:intergenic | 35.0% | |
| GCTACTACTATACTATCAAG+AGG | + | chr7_1:16727898-16727917 | Msa1011910:intron | 35.0% | |
| GTAGACTTCTTGAACATGCT+AGG | - | chr7_1:16724361-16724380 | None:intergenic | 40.0% | |
| !!! | GATGTGGTTTTTTCCATGTC+GGG | + | chr7_1:16724579-16724598 | Msa1011910:intron | 40.0% |
| !!! | ATGTGGTTTTTTCCATGTCG+GGG | + | chr7_1:16724580-16724599 | Msa1011910:intron | 40.0% |
| TTGTTTATATGACCCCGACA+TGG | - | chr7_1:16724595-16724614 | None:intergenic | 40.0% | |
| ! | TGAGCTTAACTCAGTTGGTA+TGG | + | chr7_1:16724855-16724874 | Msa1011910:intron | 40.0% |
| CATAAAATATGCAAGGTCCG+AGG | + | chr7_1:16724884-16724903 | Msa1011910:intron | 40.0% | |
| !! | TGCGAATTTGTTGTGGCTTT+GGG | - | chr7_1:16725394-16725413 | None:intergenic | 40.0% |
| !! | ATGCGAATTTGTTGTGGCTT+TGG | - | chr7_1:16725395-16725414 | None:intergenic | 40.0% |
| !! | TCGAGAATGCGAATTTGTTG+TGG | - | chr7_1:16725401-16725420 | None:intergenic | 40.0% |
| !! | TCGAAGCCATTTTCAACTCA+GGG | + | chr7_1:16725417-16725436 | Msa1011910:CDS | 40.0% |
| ATCTTCGTAATTTCCTCCCT+TGG | - | chr7_1:16725455-16725474 | None:intergenic | 40.0% | |
| ! | GTGATGCCAATGTCTTTTAC+TGG | + | chr7_1:16725507-16725526 | Msa1011910:CDS | 40.0% |
| GTGTTTCTCGTTTCTTGTTG+TGG | - | chr7_1:16725577-16725596 | None:intergenic | 40.0% | |
| CGAGAAACACAACAAAACTC+TGG | + | chr7_1:16725587-16725606 | Msa1011910:CDS | 40.0% | |
| GAAGATGACGATGATGAGTT+GGG | - | chr7_1:16725635-16725654 | None:intergenic | 40.0% | |
| AGAAGATGACGATGATGAGT+TGG | - | chr7_1:16725636-16725655 | None:intergenic | 40.0% | |
| TCATCATCGTCATCTTCTTC+CGG | + | chr7_1:16725638-16725657 | Msa1011910:CDS | 40.0% | |
| AATTGCAATTTCATCGGGAG+AGG | - | chr7_1:16725675-16725694 | None:intergenic | 40.0% | |
| GGATTCTCCAATGCTAATGA+TGG | + | chr7_1:16725707-16725726 | Msa1011910:CDS | 40.0% | |
| GGGTGTAGGTTGTTGTAAAT+TGG | - | chr7_1:16725813-16725832 | None:intergenic | 40.0% | |
| AATATGATTGTCCACAGGGA+AGG | - | chr7_1:16725846-16725865 | None:intergenic | 40.0% | |
| !! | AAACCTATGTGGTGTTGTCA+TGG | - | chr7_1:16725891-16725910 | None:intergenic | 40.0% |
| TGTTAATGGAAGCTCCTCAA+TGG | + | chr7_1:16725943-16725962 | Msa1011910:CDS | 40.0% | |
| ! | AATTAAGTTGTGGGTCTTGC+TGG | - | chr7_1:16726120-16726139 | None:intergenic | 40.0% |
| !! | TCCATCTGGTTCTCAAAAAG+CGG | - | chr7_1:16726429-16726448 | None:intergenic | 40.0% |
| TTCATCTCTCACATGCAACT+TGG | - | chr7_1:16726613-16726632 | None:intergenic | 40.0% | |
| AAGGATGCACGAACGTTAAA+GGG | - | chr7_1:16726732-16726751 | None:intergenic | 40.0% | |
| AAAGGATGCACGAACGTTAA+AGG | - | chr7_1:16726733-16726752 | None:intergenic | 40.0% | |
| TTTAACGTTCGTGCATCCTT+TGG | + | chr7_1:16726732-16726751 | Msa1011910:CDS | 40.0% | |
| ! | TCCAGTTCTAACCGATGAAT+GGG | + | chr7_1:16726788-16726807 | Msa1011910:CDS | 40.0% |
| !! | AAACAACCTCTGGGGTAAAA+AGG | + | chr7_1:16726989-16727008 | Msa1011910:intron | 40.0% |
| ! | AAGGAGGCATAGCATACATA+TGG | - | chr7_1:16727445-16727464 | None:intergenic | 40.0% |
| GTAGCTAGGTATGTATAAGG+AGG | - | chr7_1:16727461-16727480 | None:intergenic | 40.0% | |
| TCGGTAGCTAGGTATGTATA+AGG | - | chr7_1:16727464-16727483 | None:intergenic | 40.0% | |
| ! | CACACATAACACATGGATTG+GGG | + | chr7_1:16727506-16727525 | Msa1011910:intron | 40.0% |
| !! | ACACATAACACATGGATTGG+GGG | + | chr7_1:16727507-16727526 | Msa1011910:intron | 40.0% |
| AGATCGTTGTATCGAGTAGT+TGG | - | chr7_1:16727592-16727611 | None:intergenic | 40.0% | |
| TAGGATCAGTCAAGTCAAAC+TGG | - | chr7_1:16727849-16727868 | None:intergenic | 40.0% | |
| ATCCAAATGTGCAAATGTCG+TGG | - | chr7_1:16727878-16727897 | None:intergenic | 40.0% | |
| TGGCTTCCTCGAACAAACAT+TGG | + | chr7_1:16724335-16724354 | Msa1011910:CDS | 45.0% | |
| TCCAACCAACGGAATTCTCA+AGG | + | chr7_1:16724388-16724407 | Msa1011910:CDS | 45.0% | |
| CAGTTAAGAGAGACGAGTTG+AGG | - | chr7_1:16724414-16724433 | None:intergenic | 45.0% | |
| CTCAACTCGTCTCTCTTAAC+TGG | + | chr7_1:16724412-16724431 | Msa1011910:CDS | 45.0% | |
| CATCGTGAGCTTAACTCAGT+TGG | + | chr7_1:16724850-16724869 | Msa1011910:intron | 45.0% | |
| !! | TTCCATCTTGGCTTTGGTTC+TGG | - | chr7_1:16725371-16725390 | None:intergenic | 45.0% |
| ! | TTTGGGTTCCATCTTGGCTT+TGG | - | chr7_1:16725377-16725396 | None:intergenic | 45.0% |
| !! | CTCGAAGCCATTTTCAACTC+AGG | + | chr7_1:16725416-16725435 | Msa1011910:CDS | 45.0% |
| !! | AGCCATTTTCAACTCAGGGA+TGG | + | chr7_1:16725421-16725440 | Msa1011910:CDS | 45.0% |
| ! | CACCATCCCTGAGTTGAAAA+TGG | - | chr7_1:16725426-16725445 | None:intergenic | 45.0% |
| TCGTAATTTCCTCCCTTGGT+GGG | - | chr7_1:16725451-16725470 | None:intergenic | 45.0% | |
| TTCGTAATTTCCTCCCTTGG+TGG | - | chr7_1:16725452-16725471 | None:intergenic | 45.0% | |
| ! | CTCCAATGCTAATGATGGGA+TGG | + | chr7_1:16725712-16725731 | Msa1011910:CDS | 45.0% |
| CACCATCCCATCATTAGCAT+TGG | - | chr7_1:16725717-16725736 | None:intergenic | 45.0% | |
| ! | CAATGCTAATGATGGGATGG+TGG | + | chr7_1:16725715-16725734 | Msa1011910:CDS | 45.0% |
| TTCTAATTCACCCGCAGTCT+CGG | + | chr7_1:16725742-16725761 | Msa1011910:CDS | 45.0% | |
| ! | AAGGAGAAAAATGGGGGTGT+AGG | - | chr7_1:16725827-16725846 | None:intergenic | 45.0% |
| ACAGGGAAGGAGAAAAATGG+GGG | - | chr7_1:16725833-16725852 | None:intergenic | 45.0% | |
| CACAGGGAAGGAGAAAAATG+GGG | - | chr7_1:16725834-16725853 | None:intergenic | 45.0% | |
| CCACAGGGAAGGAGAAAAAT+GGG | - | chr7_1:16725835-16725854 | None:intergenic | 45.0% | |
| TCCACAGGGAAGGAGAAAAA+TGG | - | chr7_1:16725836-16725855 | None:intergenic | 45.0% | |
| !! | TGTGGTGTTGTCATGGCATT+AGG | - | chr7_1:16725884-16725903 | None:intergenic | 45.0% |
| ATGCCATGACAACACCACAT+AGG | + | chr7_1:16725885-16725904 | Msa1011910:CDS | 45.0% | |
| AGGTAAGGGTTGAACCATTG+AGG | - | chr7_1:16725960-16725979 | None:intergenic | 45.0% | |
| ! | TCGCGTTTGGCTTAATCAGA+AGG | - | chr7_1:16726396-16726415 | None:intergenic | 45.0% |
| TACTAAGGACGCCTCATTCA+TGG | + | chr7_1:16726695-16726714 | Msa1011910:CDS | 45.0% | |
| ! | GCCTCATTCATGGTTGATGT+GGG | + | chr7_1:16726705-16726724 | Msa1011910:CDS | 45.0% |
| ! | CCTCATTCATGGTTGATGTG+GGG | + | chr7_1:16726706-16726725 | Msa1011910:CDS | 45.0% |
| ! | CTCCAGTTCTAACCGATGAA+TGG | + | chr7_1:16726787-16726806 | Msa1011910:CDS | 45.0% |
| ! | CCAGTTCTAACCGATGAATG+GGG | + | chr7_1:16726789-16726808 | Msa1011910:CDS | 45.0% |
| GAGGGTAATACCCCATTCAT+CGG | - | chr7_1:16726802-16726821 | None:intergenic | 45.0% | |
| GGTAATAAGTAGCACCATGG+TGG | - | chr7_1:16726833-16726852 | None:intergenic | 45.0% | |
| CCAGGTAATAAGTAGCACCA+TGG | - | chr7_1:16726836-16726855 | None:intergenic | 45.0% | |
| !! | CCATGGTGCTACTTATTACC+TGG | + | chr7_1:16726833-16726852 | Msa1011910:CDS | 45.0% |
| TAAGGGAAACCTTGACACAC+CGG | + | chr7_1:16726919-16726938 | Msa1011910:intron | 45.0% | |
| AGTTCGGGAAAACAACCTCT+GGG | + | chr7_1:16726980-16726999 | Msa1011910:intron | 45.0% | |
| TCAAAGAGCCTAACCTAGCT+AGG | - | chr7_1:16727406-16727425 | None:intergenic | 45.0% | |
| ! | CATACCTAGCTACCGACTAT+TGG | + | chr7_1:16727468-16727487 | Msa1011910:intron | 45.0% |
| !! | CACATAACACATGGATTGGG+GGG | + | chr7_1:16727508-16727527 | Msa1011910:intron | 45.0% |
| TTGGGGGGATTTCTCATAGT+TGG | + | chr7_1:16727523-16727542 | Msa1011910:intron | 45.0% | |
| AATAACCACGCTTTAGCACC+TGG | + | chr7_1:16727794-16727813 | Msa1011910:intron | 45.0% | |
| AAATGTGCAAATGTCGTGGC+AGG | - | chr7_1:16727874-16727893 | None:intergenic | 45.0% | |
| TGCCACGACATTTGCACATT+TGG | + | chr7_1:16727873-16727892 | Msa1011910:intron | 45.0% | |
| !!! | TATATTTGTAATTTTTTTAA+GGG | - | chr7_1:16726491-16726510 | None:intergenic | 5.0% |
| !!! | ATATATTTGTAATTTTTTTA+AGG | - | chr7_1:16726492-16726511 | None:intergenic | 5.0% |
| !! | TATATAACTATTTATTTAAT+TGG | + | chr7_1:16727013-16727032 | Msa1011910:intron | 5.0% |
| GCTAGGCCAATGTTTGTTCG+AGG | - | chr7_1:16724344-16724363 | None:intergenic | 50.0% | |
| CTACCAATGCGTCCAACCAA+CGG | + | chr7_1:16724377-16724396 | Msa1011910:CDS | 50.0% | |
| ! | ATTCCGTTGGTTGGACGCAT+TGG | - | chr7_1:16724383-16724402 | None:intergenic | 50.0% |
| GCCTTGAGAATTCCGTTGGT+TGG | - | chr7_1:16724392-16724411 | None:intergenic | 50.0% | |
| TGAGGCCTTGAGAATTCCGT+TGG | - | chr7_1:16724396-16724415 | None:intergenic | 50.0% | |
| CTCCAGAACCAAAGCCAAGA+TGG | + | chr7_1:16725366-16725385 | Msa1011910:CDS | 50.0% | |
| !! | TGTGGCTTTGGGTTCCATCT+TGG | - | chr7_1:16725383-16725402 | None:intergenic | 50.0% |
| ! | GATGACGATGATGAGTTGGG+TGG | - | chr7_1:16725632-16725651 | None:intergenic | 50.0% |
| !! | GGGAGAGGCTTTTTGATGAC+CGG | - | chr7_1:16725660-16725679 | None:intergenic | 50.0% |
| !!! | TTTTGGTTCACCGAGACTGC+GGG | - | chr7_1:16725755-16725774 | None:intergenic | 50.0% |
| !!! | GTTTTGGTTCACCGAGACTG+CGG | - | chr7_1:16725756-16725775 | None:intergenic | 50.0% |
| !! | CCCATTTTTCTCCTTCCCTG+TGG | + | chr7_1:16725832-16725851 | Msa1011910:CDS | 50.0% |
| ACAGCTGCACCAATGGTAGT+CGG | - | chr7_1:16726202-16726221 | None:intergenic | 50.0% | |
| AACAGCAACAGCTGCACCAA+TGG | - | chr7_1:16726209-16726228 | None:intergenic | 50.0% | |
| !! | CGGCTTGGTAATTTCGCGTT+TGG | - | chr7_1:16726409-16726428 | None:intergenic | 50.0% |
| ! | CTGGTTCTCAAAAAGCGGCT+TGG | - | chr7_1:16726424-16726443 | None:intergenic | 50.0% |
| !!! | GCCGCTTTTTGAGAACCAGA+TGG | + | chr7_1:16726425-16726444 | Msa1011910:intron | 50.0% |
| GTGTTTGTCAGGATTTGGCG+TGG | + | chr7_1:16726644-16726663 | Msa1011910:intron | 50.0% | |
| TCAGGATTTGGCGTGGAAGA+TGG | + | chr7_1:16726651-16726670 | Msa1011910:intron | 50.0% | |
| ATTTGGCGTGGAAGATGGAG+CGG | + | chr7_1:16726656-16726675 | Msa1011910:CDS | 50.0% | |
| ! | CGCCTCATTCATGGTTGATG+TGG | + | chr7_1:16726704-16726723 | Msa1011910:CDS | 50.0% |
| CCCCACATCAACCATGAATG+AGG | - | chr7_1:16726709-16726728 | None:intergenic | 50.0% | |
| GAGAACTGCTCGATCTCCAA+AGG | - | chr7_1:16726751-16726770 | None:intergenic | 50.0% | |
| GCAGTTCTCTTTGACTCCTC+TGG | + | chr7_1:16726762-16726781 | Msa1011910:CDS | 50.0% | |
| ! | GGTTAGAACTGGAGTACCAG+AGG | - | chr7_1:16726781-16726800 | None:intergenic | 50.0% |
| ! | CCCCATTCATCGGTTAGAAC+TGG | - | chr7_1:16726792-16726811 | None:intergenic | 50.0% |
| GAGTTCGGGAAAACAACCTC+TGG | + | chr7_1:16726979-16726998 | Msa1011910:intron | 50.0% | |
| GTTCGGGAAAACAACCTCTG+GGG | + | chr7_1:16726981-16727000 | Msa1011910:intron | 50.0% | |
| GTGTCCAATAGTCGGTAGCT+AGG | - | chr7_1:16727475-16727494 | None:intergenic | 50.0% | |
| TTGTACCAGGTGCTAAAGCG+TGG | - | chr7_1:16727802-16727821 | None:intergenic | 50.0% | |
| CGCTTTAGCACCTGGTACAA+CGG | + | chr7_1:16727802-16727821 | Msa1011910:intron | 50.0% | |
| AAGGTCCGAGGTTCAAACCC+CGG | + | chr7_1:16724896-16724915 | Msa1011910:intron | 55.0% | |
| AGGGATGGTGAACCCACCAA+GGG | + | chr7_1:16725436-16725455 | Msa1011910:CDS | 55.0% | |
| CCAATGGTAGTCGGAGGAAG+AGG | - | chr7_1:16726193-16726212 | None:intergenic | 55.0% | |
| CCTCTTCCTCCGACTACCAT+TGG | + | chr7_1:16726190-16726209 | Msa1011910:CDS | 55.0% | |
| ! | ACCATGGTGGAGCGAATCGA+GGG | - | chr7_1:16726820-16726839 | None:intergenic | 55.0% |
| !! | TGGTGCTTGCTGTTGCACCA+GGG | - | chr7_1:16727829-16727848 | None:intergenic | 55.0% |
| GCAAATGTCGTGGCAGGAGT+AGG | - | chr7_1:16727868-16727887 | None:intergenic | 55.0% | |
| GGTGACCGGGGTTTGAACCT+CGG | - | chr7_1:16724904-16724923 | None:intergenic | 60.0% | |
| CAGGGATGGTGAACCCACCA+AGG | + | chr7_1:16725435-16725454 | Msa1011910:CDS | 60.0% | |
| GATGGTGAACCCACCAAGGG+AGG | + | chr7_1:16725439-16725458 | Msa1011910:CDS | 60.0% | |
| GCTGCACCAATGGTAGTCGG+AGG | - | chr7_1:16726199-16726218 | None:intergenic | 60.0% | |
| ! | ACCCTCGATTCGCTCCACCA+TGG | + | chr7_1:16726816-16726835 | Msa1011910:CDS | 60.0% |
| ! | CACCATGGTGGAGCGAATCG+AGG | - | chr7_1:16726821-16726840 | None:intergenic | 60.0% |
| !! | GGTGCTTGCTGTTGCACCAG+GGG | - | chr7_1:16727828-16727847 | None:intergenic | 60.0% |
| !! | CTGGTGCTTGCTGTTGCACC+AGG | - | chr7_1:16727830-16727849 | None:intergenic | 60.0% |
| TGCGCATTGCACGCGTCCGT+GGG | - | chr7_1:16726562-16726581 | None:intergenic | 65.0% | |
| TTGCGCATTGCACGCGTCCG+TGG | - | chr7_1:16726563-16726582 | None:intergenic | 65.0% | |
| GCACCTGGTACAACGGCCCC+TGG | + | chr7_1:16727809-16727828 | Msa1011910:intron | 70.0% | |
| GCACCAGGGGCCGTTGTACC+AGG | - | chr7_1:16727815-16727834 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 16724334 | 16728051 | 16724334 | ID=Msa1011910;Name=Msa1011910 |
| chr7_1 | mRNA | 16724334 | 16728051 | 16724334 | ID=Msa1011910-mRNA-1;Parent=Msa1011910;Name=Msa1011910-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|0.75|1|1|4|0|391 |
| chr7_1 | exon | 16724334 | 16724433 | 16724334 | ID=Msa1011910-mRNA-1:exon:4238;Parent=Msa1011910-mRNA-1 |
| chr7_1 | exon | 16725345 | 16726211 | 16725345 | ID=Msa1011910-mRNA-1:exon:4239;Parent=Msa1011910-mRNA-1 |
| chr7_1 | exon | 16726655 | 16726854 | 16726655 | ID=Msa1011910-mRNA-1:exon:4240;Parent=Msa1011910-mRNA-1 |
| chr7_1 | exon | 16728043 | 16728051 | 16728043 | ID=Msa1011910-mRNA-1:exon:4241;Parent=Msa1011910-mRNA-1 |
| chr7_1 | CDS | 16724334 | 16724433 | 16724334 | ID=Msa1011910-mRNA-1:cds;Parent=Msa1011910-mRNA-1 |
| chr7_1 | CDS | 16725345 | 16726211 | 16725345 | ID=Msa1011910-mRNA-1:cds;Parent=Msa1011910-mRNA-1 |
| chr7_1 | CDS | 16726655 | 16726854 | 16726655 | ID=Msa1011910-mRNA-1:cds;Parent=Msa1011910-mRNA-1 |
| chr7_1 | CDS | 16728043 | 16728051 | 16728043 | ID=Msa1011910-mRNA-1:cds;Parent=Msa1011910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
