Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012490 | AES78253.1 | 86.364 | 374 | 42 | 2 | 1 | 366 | 69 | 441 | 0.0 | 608 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012490 | sp|Q9ZWJ9|ARR2_ARATH | 37.989 | 179 | 83 | 5 | 1 | 157 | 106 | 278 | 1.14e-25 | 112 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012490 | G7L033 | 86.364 | 374 | 42 | 2 | 1 | 366 | 69 | 441 | 0.0 | 608 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1012490 | TF | GARP-G2-like |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012490 | MtrunA17_Chr7g0223971 | 79.115 | 407 | 43 | 3 | 1 | 366 | 1 | 406 | 0.0 | 589 |
| Msa1012490 | MtrunA17_Chr7g0223991 | 70.233 | 215 | 35 | 5 | 156 | 360 | 24 | 219 | 1.51e-90 | 272 |
| Msa1012490 | MtrunA17_Chr6g0473731 | 45.430 | 372 | 145 | 10 | 1 | 357 | 12 | 340 | 1.33e-79 | 251 |
| Msa1012490 | MtrunA17_Chr4g0067981 | 36.478 | 159 | 87 | 1 | 1 | 145 | 113 | 271 | 7.91e-26 | 109 |
| Msa1012490 | MtrunA17_Chr2g0294911 | 38.750 | 160 | 86 | 4 | 1 | 148 | 111 | 270 | 5.91e-25 | 106 |
| Msa1012490 | MtrunA17_Chr4g0009981 | 28.862 | 246 | 129 | 7 | 1 | 229 | 39 | 255 | 1.21e-24 | 101 |
| Msa1012490 | MtrunA17_Chr1g0161431 | 31.771 | 192 | 106 | 5 | 1 | 168 | 93 | 283 | 3.79e-24 | 104 |
| Msa1012490 | MtrunA17_Chr4g0009851 | 31.799 | 239 | 131 | 9 | 1 | 229 | 92 | 308 | 6.16e-24 | 100 |
| Msa1012490 | MtrunA17_Chr1g0149841 | 34.118 | 170 | 82 | 3 | 2 | 148 | 88 | 250 | 5.46e-23 | 100 |
| Msa1012490 | MtrunA17_Chr8g0376881 | 33.690 | 187 | 106 | 5 | 1 | 169 | 107 | 293 | 6.05e-23 | 100 |
| Msa1012490 | MtrunA17_Chr3g0137101 | 37.654 | 162 | 77 | 4 | 9 | 148 | 98 | 257 | 3.79e-22 | 98.2 |
| Msa1012490 | MtrunA17_Chr3g0123131 | 33.155 | 187 | 99 | 5 | 1 | 164 | 95 | 278 | 1.66e-21 | 96.3 |
| Msa1012490 | MtrunA17_Chr2g0304841 | 33.146 | 178 | 88 | 4 | 8 | 156 | 107 | 282 | 2.09e-21 | 96.3 |
| Msa1012490 | MtrunA17_Chr4g0009901 | 34.810 | 158 | 84 | 2 | 1 | 154 | 91 | 233 | 2.82e-21 | 92.4 |
| Msa1012490 | MtrunA17_Chr4g0074411 | 34.395 | 157 | 90 | 2 | 10 | 153 | 109 | 265 | 2.53e-19 | 89.7 |
| Msa1012490 | MtrunA17_Chr7g0275401 | 35.185 | 162 | 86 | 3 | 2 | 145 | 88 | 248 | 5.13e-19 | 86.7 |
| Msa1012490 | MtrunA17_Chr7g0275891 | 31.034 | 203 | 91 | 6 | 2 | 167 | 89 | 279 | 5.31e-19 | 87.4 |
| Msa1012490 | MtrunA17_Chr1g0149831 | 33.529 | 170 | 80 | 4 | 2 | 148 | 25 | 184 | 7.71e-19 | 84.7 |
| Msa1012490 | MtrunA17_Chr6g0471041 | 32.500 | 160 | 78 | 2 | 1 | 151 | 96 | 234 | 1.45e-18 | 86.7 |
| Msa1012490 | MtrunA17_Chr4g0031961 | 51.562 | 64 | 31 | 0 | 82 | 145 | 124 | 187 | 4.49e-18 | 84.0 |
| Msa1012490 | MtrunA17_Chr7g0255711 | 51.515 | 66 | 32 | 0 | 80 | 145 | 82 | 147 | 6.60e-18 | 83.6 |
| Msa1012490 | MtrunA17_Chr4g0074401 | 32.099 | 162 | 94 | 3 | 10 | 155 | 108 | 269 | 4.12e-17 | 83.2 |
| Msa1012490 | MtrunA17_Chr4g0009991 | 34.848 | 132 | 64 | 3 | 12 | 138 | 2 | 116 | 1.01e-16 | 75.9 |
| Msa1012490 | MtrunA17_Chr4g0074421 | 33.103 | 145 | 86 | 2 | 10 | 143 | 43 | 187 | 1.85e-16 | 77.0 |
| Msa1012490 | MtrunA17_Chr1g0149851 | 31.250 | 192 | 87 | 4 | 2 | 155 | 88 | 272 | 2.57e-16 | 80.5 |
| Msa1012490 | MtrunA17_Chr3g0134461 | 31.884 | 138 | 58 | 2 | 1 | 138 | 91 | 192 | 2.81e-16 | 76.6 |
| Msa1012490 | MtrunA17_Chr4g0040481 | 59.259 | 54 | 22 | 0 | 88 | 141 | 157 | 210 | 4.65e-15 | 76.3 |
| Msa1012490 | MtrunA17_Chr2g0324891 | 59.259 | 54 | 22 | 0 | 88 | 141 | 160 | 213 | 1.19e-14 | 75.1 |
| Msa1012490 | MtrunA17_Chr4g0054981 | 49.206 | 63 | 32 | 0 | 88 | 150 | 309 | 371 | 2.29e-14 | 74.7 |
| Msa1012490 | MtrunA17_Chr5g0400241 | 51.667 | 60 | 29 | 0 | 88 | 147 | 310 | 369 | 3.31e-14 | 73.9 |
| Msa1012490 | MtrunA17_Chr3g0134481 | 28.571 | 140 | 54 | 2 | 1 | 140 | 90 | 183 | 3.81e-14 | 70.5 |
| Msa1012490 | MtrunA17_Chr6g0469321 | 56.818 | 44 | 19 | 0 | 105 | 148 | 70 | 113 | 2.79e-11 | 62.0 |
| Msa1012490 | MtrunA17_Chr6g0461641 | 50.909 | 55 | 26 | 1 | 89 | 142 | 42 | 96 | 8.72e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012490 | AT3G16857.3 | 32.218 | 239 | 112 | 6 | 1 | 195 | 45 | 277 | 1.59e-26 | 111 |
| Msa1012490 | AT3G16857.1 | 35.079 | 191 | 84 | 4 | 1 | 157 | 115 | 299 | 3.26e-26 | 110 |
| Msa1012490 | AT3G16857.2 | 35.079 | 191 | 84 | 4 | 1 | 157 | 115 | 299 | 3.90e-26 | 110 |
| Msa1012490 | AT5G07210.2 | 60.465 | 86 | 34 | 0 | 80 | 165 | 213 | 298 | 2.12e-25 | 108 |
| Msa1012490 | AT5G07210.1 | 60.465 | 86 | 34 | 0 | 80 | 165 | 221 | 306 | 2.14e-25 | 108 |
| Msa1012490 | AT4G31920.1 | 34.211 | 152 | 100 | 0 | 1 | 152 | 95 | 246 | 1.81e-22 | 99.4 |
| Msa1012490 | AT2G01760.3 | 31.214 | 173 | 91 | 3 | 1 | 148 | 25 | 194 | 9.88e-22 | 95.1 |
| Msa1012490 | AT2G25180.1 | 35.625 | 160 | 91 | 2 | 1 | 148 | 95 | 254 | 1.48e-21 | 97.1 |
| Msa1012490 | AT2G27070.1 | 43.609 | 133 | 71 | 2 | 37 | 165 | 169 | 301 | 4.41e-21 | 95.5 |
| Msa1012490 | AT2G01760.1 | 31.214 | 173 | 91 | 3 | 1 | 148 | 90 | 259 | 4.64e-21 | 94.0 |
| Msa1012490 | AT2G01760.2 | 31.214 | 173 | 91 | 3 | 1 | 148 | 118 | 287 | 8.93e-21 | 93.6 |
| Msa1012490 | AT5G58080.1 | 31.383 | 188 | 103 | 4 | 10 | 179 | 104 | 283 | 2.96e-20 | 93.2 |
| Msa1012490 | AT5G49240.1 | 33.758 | 157 | 81 | 4 | 1 | 138 | 120 | 272 | 1.39e-18 | 85.5 |
| Msa1012490 | AT3G10760.1 | 48.529 | 68 | 35 | 0 | 78 | 145 | 94 | 161 | 4.66e-18 | 84.7 |
| Msa1012490 | AT5G05090.1 | 47.826 | 69 | 36 | 0 | 77 | 145 | 69 | 137 | 6.92e-18 | 83.2 |
| Msa1012490 | AT5G59570.2 | 37.500 | 112 | 59 | 2 | 47 | 147 | 88 | 199 | 1.03e-17 | 83.2 |
| Msa1012490 | AT5G59570.1 | 37.500 | 112 | 59 | 2 | 47 | 147 | 88 | 199 | 1.03e-17 | 83.2 |
| Msa1012490 | AT1G67710.2 | 36.310 | 168 | 89 | 5 | 1 | 151 | 24 | 190 | 1.07e-17 | 84.7 |
| Msa1012490 | AT3G46640.2 | 50.000 | 68 | 32 | 1 | 80 | 145 | 133 | 200 | 1.07e-17 | 83.6 |
| Msa1012490 | AT3G46640.1 | 50.000 | 68 | 32 | 1 | 80 | 145 | 133 | 200 | 1.07e-17 | 83.6 |
| Msa1012490 | AT1G67710.3 | 35.714 | 168 | 90 | 5 | 1 | 151 | 15 | 181 | 1.32e-17 | 84.3 |
| Msa1012490 | AT2G40970.1 | 51.515 | 66 | 32 | 0 | 80 | 145 | 96 | 161 | 1.38e-17 | 82.0 |
| Msa1012490 | AT1G67710.1 | 35.714 | 168 | 90 | 5 | 1 | 151 | 89 | 255 | 1.62e-17 | 84.3 |
| Msa1012490 | AT3G46640.3 | 50.000 | 68 | 32 | 1 | 80 | 145 | 133 | 200 | 1.83e-17 | 82.8 |
| Msa1012490 | AT5G44190.1 | 60.656 | 61 | 22 | 1 | 81 | 141 | 141 | 199 | 1.63e-16 | 80.9 |
| Msa1012490 | AT5G44190.2 | 60.656 | 61 | 22 | 1 | 81 | 141 | 141 | 199 | 1.86e-16 | 80.1 |
| Msa1012490 | AT2G20570.1 | 57.407 | 54 | 23 | 0 | 88 | 141 | 152 | 205 | 2.98e-14 | 74.3 |
| Msa1012490 | AT4G18020.8 | 43.421 | 76 | 40 | 1 | 89 | 164 | 296 | 368 | 3.64e-14 | 74.3 |
| Msa1012490 | AT4G18020.11 | 43.421 | 76 | 40 | 1 | 89 | 164 | 296 | 368 | 3.64e-14 | 74.3 |
| Msa1012490 | AT4G18020.4 | 43.421 | 76 | 40 | 1 | 89 | 164 | 296 | 368 | 3.64e-14 | 74.3 |
| Msa1012490 | AT4G18020.5 | 43.421 | 76 | 40 | 1 | 89 | 164 | 296 | 368 | 3.64e-14 | 74.3 |
| Msa1012490 | AT4G18020.10 | 43.421 | 76 | 40 | 1 | 89 | 164 | 296 | 368 | 3.64e-14 | 74.3 |
| Msa1012490 | AT4G18020.7 | 43.421 | 76 | 40 | 1 | 89 | 164 | 296 | 368 | 3.64e-14 | 74.3 |
| Msa1012490 | AT4G18020.3 | 43.421 | 76 | 40 | 1 | 89 | 164 | 296 | 368 | 4.05e-14 | 74.3 |
| Msa1012490 | AT4G18020.2 | 43.421 | 76 | 40 | 1 | 89 | 164 | 296 | 368 | 4.05e-14 | 74.3 |
| Msa1012490 | AT4G18020.1 | 43.421 | 76 | 40 | 1 | 89 | 164 | 296 | 368 | 4.05e-14 | 74.3 |
| Msa1012490 | AT4G18020.6 | 43.421 | 76 | 40 | 1 | 89 | 164 | 296 | 368 | 4.05e-14 | 74.3 |
| Msa1012490 | AT4G18020.9 | 43.421 | 76 | 40 | 1 | 89 | 164 | 296 | 368 | 4.05e-14 | 74.3 |
| Msa1012490 | AT2G20570.2 | 58.824 | 51 | 21 | 0 | 91 | 141 | 171 | 221 | 1.38e-13 | 72.4 |
Find 61 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCCCGTTTCATTGTTATT+TGG | 0.195688 | 7_1:+17589998 | None:intergenic |
| CAATTTCCTTATATACAAAA+AGG | 0.233477 | 7_1:-17590427 | Msa1012490:CDS |
| GAACTATGAACAATGGATTA+AGG | 0.243060 | 7_1:-17590030 | Msa1012490:CDS |
| GCTGAAGACTTCAAACATAT+TGG | 0.250357 | 7_1:-17591843 | Msa1012490:CDS |
| TATGCCAGTGTTTGCAAATA+TGG | 0.272397 | 7_1:+17590514 | None:intergenic |
| AAATGTAGCAAGTCACTTAC+AGG | 0.277878 | 7_1:-17590856 | Msa1012490:intron |
| CAACATGATGTGTTGGAAAT+TGG | 0.289454 | 7_1:+17590452 | None:intergenic |
| CTGCTTGCTATTGACCAAAT+TGG | 0.292299 | 7_1:-17591618 | Msa1012490:CDS |
| TTTGGAATTCAGCTGAATAA+TGG | 0.295030 | 7_1:-17590073 | Msa1012490:CDS |
| GTAAGAAATAACAATCCTTT+TGG | 0.299725 | 7_1:-17590091 | Msa1012490:CDS |
| ACTTACTTTCCAATCCAATT+TGG | 0.301438 | 7_1:+17591604 | None:intergenic |
| TTAAGAAACAAAAGCTTGTT+TGG | 0.309580 | 7_1:-17591665 | Msa1012490:CDS |
| GATATTAGAAACCAAAATTA+TGG | 0.315005 | 7_1:-17590157 | Msa1012490:CDS |
| AGGGCTGGCTCTTCAAGATT+TGG | 0.319081 | 7_1:-17590407 | Msa1012490:CDS |
| ATCTCGAAGACACTAGAAAA+TGG | 0.329147 | 7_1:-17591897 | Msa1012490:CDS |
| TTCAAGATTTGGAACAAGTT+AGG | 0.330501 | 7_1:-17590396 | Msa1012490:CDS |
| TTGAAGTCTTCAGCACAAAA+AGG | 0.338736 | 7_1:+17591852 | None:intergenic |
| GGCTGTGCCAAAGAAAATTC+TGG | 0.364480 | 7_1:-17590910 | Msa1012490:CDS |
| AACTATGAACAATGGATTAA+GGG | 0.373260 | 7_1:-17590029 | Msa1012490:CDS |
| CTGAAGACTTCAAACATATT+GGG | 0.380229 | 7_1:-17591842 | Msa1012490:CDS |
| ACATATTGGGAAATATGTTA+TGG | 0.400575 | 7_1:-17591829 | Msa1012490:CDS |
| AGTCCAAATAACAATGAAAC+GGG | 0.405599 | 7_1:-17590001 | Msa1012490:CDS |
| AGCTATGATCAAAACAGGTT+TGG | 0.409010 | 7_1:-17590328 | Msa1012490:CDS |
| GGAGCAGGAATGGTTGGAAT+TGG | 0.414917 | 7_1:-17590052 | Msa1012490:CDS |
| TAGAGCTGAACAAGGATTGA+TGG | 0.418771 | 7_1:-17590227 | Msa1012490:CDS |
| CTGCGAGATGTTGCAGAGAA+AGG | 0.423104 | 7_1:-17590655 | Msa1012490:CDS |
| GTGTTGGAAATTGGTTGAAA+TGG | 0.423793 | 7_1:+17590461 | None:intergenic |
| ATAACAGCTATGATCAAAAC+AGG | 0.431496 | 7_1:-17590333 | Msa1012490:CDS |
| TGCTATTGACCAAATTGGAT+TGG | 0.439605 | 7_1:-17591613 | Msa1012490:CDS |
| CAGTTATGTCTGAAGACAAT+AGG | 0.449275 | 7_1:-17591929 | None:intergenic |
| ACATCAGAAGTAAATTTATG+AGG | 0.469959 | 7_1:+17590112 | None:intergenic |
| CTTCTTCAAGTTTCTTAACA+AGG | 0.470322 | 7_1:-17590195 | Msa1012490:CDS |
| TAGTCCAAATAACAATGAAA+CGG | 0.476245 | 7_1:-17590002 | Msa1012490:CDS |
| GATTTGGAACAAGTTAGGCT+TGG | 0.484973 | 7_1:-17590391 | Msa1012490:CDS |
| AGTGTCTTCGAGATTAAACT+TGG | 0.495636 | 7_1:+17591906 | None:intergenic |
| CTTGAATATCTCTCTCTCCT+TGG | 0.495918 | 7_1:+17591691 | None:intergenic |
| GTTGCAGAGAAAGGAATGGT+TGG | 0.508048 | 7_1:-17590646 | Msa1012490:CDS |
| TAGGCTTGGAAAATCAAAGT+TGG | 0.508790 | 7_1:-17590377 | Msa1012490:CDS |
| CTCACAGAGCTCTAAGATCA+AGG | 0.512314 | 7_1:-17590615 | Msa1012490:CDS |
| ACAATGAAACGGGGAGGGAG+TGG | 0.514140 | 7_1:-17589991 | Msa1012490:CDS |
| AATAATGGAGCAGGAATGGT+TGG | 0.529804 | 7_1:-17590058 | Msa1012490:CDS |
| TTCTTCAAGTTTCTTAACAA+GGG | 0.536372 | 7_1:-17590194 | Msa1012490:CDS |
| GCTGAATAATGGAGCAGGAA+TGG | 0.538668 | 7_1:-17590062 | Msa1012490:CDS |
| ATTCAGCTGAATAATGGAGC+AGG | 0.542016 | 7_1:-17590067 | Msa1012490:CDS |
| TTATTCAGCTGAATTCCAAA+AGG | 0.546390 | 7_1:+17590076 | None:intergenic |
| AGTGGAAGAGAGTTTCTAGC+AGG | 0.567708 | 7_1:-17589973 | Msa1012490:CDS |
| AATTGGTCAACATGATGTGT+TGG | 0.569003 | 7_1:+17590445 | None:intergenic |
| GCAGAGAAAGGAATGGTTGG+AGG | 0.578705 | 7_1:-17590643 | Msa1012490:CDS |
| ACTTCCATATTTGCAAACAC+TGG | 0.582579 | 7_1:-17590518 | Msa1012490:CDS |
| GGAATTGGAACTATGAACAA+TGG | 0.591999 | 7_1:-17590037 | Msa1012490:CDS |
| GTTATTCTCTGCAACAACAT+CGG | 0.600928 | 7_1:+17590351 | None:intergenic |
| TCTATATGATGAAAAGCTAG+TGG | 0.601942 | 7_1:+17590246 | None:intergenic |
| AGAAAGAATAAAGAATGCCA+AGG | 0.602025 | 7_1:-17591708 | Msa1012490:CDS |
| TCATCATATAGAGCTGAACA+AGG | 0.608032 | 7_1:-17590235 | Msa1012490:CDS |
| ATTTCTCTTATCATAGACAT+CGG | 0.611317 | 7_1:+17590577 | None:intergenic |
| GTTTGCAAATATGGAAGTGT+TGG | 0.612895 | 7_1:+17590523 | None:intergenic |
| AAATAACAATGAAACGGGGA+GGG | 0.644017 | 7_1:-17589996 | Msa1012490:CDS |
| ACACTGGCATATCAAACAAG+AGG | 0.654807 | 7_1:-17590502 | Msa1012490:CDS |
| CAAATAACAATGAAACGGGG+AGG | 0.655615 | 7_1:-17589997 | Msa1012490:CDS |
| AGATGTTGCAGAGAAAGGAA+TGG | 0.689031 | 7_1:-17590650 | Msa1012490:CDS |
| GTCCAAATAACAATGAAACG+GGG | 0.742493 | 7_1:-17590000 | Msa1012490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCTTTTAAAAATATTTGAA+AGG | - | chr7_1:17590308-17590327 | Msa1012490:CDS | 10.0% |
| !! | TGTGTATTAATATTAAAATT+TGG | + | chr7_1:17590853-17590872 | None:intergenic | 10.0% |
| !! | ATGATGATATTATAATATTA+TGG | + | chr7_1:17591087-17591106 | None:intergenic | 10.0% |
| !!! | ATCTTTTAAAAATATTTGAA+AGG | - | chr7_1:17590308-17590327 | Msa1012490:CDS | 10.0% |
| !! | TGTGTATTAATATTAAAATT+TGG | + | chr7_1:17590853-17590872 | None:intergenic | 10.0% |
| !! | ATGATGATATTATAATATTA+TGG | + | chr7_1:17591087-17591106 | None:intergenic | 10.0% |
| !!! | ATTTTACAGTGATATTATAA+TGG | - | chr7_1:17590532-17590551 | Msa1012490:CDS | 15.0% |
| !! | TGTTATTAGTATATTTACTT+AGG | + | chr7_1:17590673-17590692 | None:intergenic | 15.0% |
| !!! | AACAATTTAGTAATTTTCAT+AGG | - | chr7_1:17590689-17590708 | Msa1012490:intron | 15.0% |
| !! | AATATTAAAATTTGGATGAT+AGG | + | chr7_1:17590845-17590864 | None:intergenic | 15.0% |
| !! | AATTTCCTTATATACAAAAA+GGG | - | chr7_1:17591462-17591481 | Msa1012490:intron | 15.0% |
| !!! | ATTTTACAGTGATATTATAA+TGG | - | chr7_1:17590532-17590551 | Msa1012490:CDS | 15.0% |
| !! | TGTTATTAGTATATTTACTT+AGG | + | chr7_1:17590673-17590692 | None:intergenic | 15.0% |
| !!! | AACAATTTAGTAATTTTCAT+AGG | - | chr7_1:17590689-17590708 | Msa1012490:intron | 15.0% |
| !! | AATATTAAAATTTGGATGAT+AGG | + | chr7_1:17590845-17590864 | None:intergenic | 15.0% |
| !! | AATTTCCTTATATACAAAAA+GGG | - | chr7_1:17591462-17591481 | Msa1012490:intron | 15.0% |
| !! | ATATCACTGTAAAATAATAG+CGG | + | chr7_1:17590527-17590546 | None:intergenic | 20.0% |
| !!! | CTTTTTGTATATAAGGAAAT+TGG | + | chr7_1:17591463-17591482 | None:intergenic | 20.0% |
| !! | CAATTTCCTTATATACAAAA+AGG | - | chr7_1:17591461-17591480 | Msa1012490:intron | 20.0% |
| !!! | TTAACAAGGGATTTTAAATT+TGG | - | chr7_1:17591707-17591726 | Msa1012490:CDS | 20.0% |
| !! | GATATTAGAAACCAAAATTA+TGG | - | chr7_1:17591731-17591750 | Msa1012490:CDS | 20.0% |
| !! | ATATCACTGTAAAATAATAG+CGG | + | chr7_1:17590527-17590546 | None:intergenic | 20.0% |
| !!! | CTTTTTGTATATAAGGAAAT+TGG | + | chr7_1:17591463-17591482 | None:intergenic | 20.0% |
| !! | CAATTTCCTTATATACAAAA+AGG | - | chr7_1:17591461-17591480 | Msa1012490:intron | 20.0% |
| !!! | TTAACAAGGGATTTTAAATT+TGG | - | chr7_1:17591707-17591726 | Msa1012490:CDS | 20.0% |
| !! | GATATTAGAAACCAAAATTA+TGG | - | chr7_1:17591731-17591750 | Msa1012490:CDS | 20.0% |
| ! | ACATATTGGGAAATATGTTA+TGG | - | chr7_1:17590059-17590078 | Msa1012490:CDS | 25.0% |
| !! | TTAAGAAACAAAAGCTTGTT+TGG | - | chr7_1:17590223-17590242 | Msa1012490:CDS | 25.0% |
| ! | ATTTGACAACCATATCATAT+GGG | - | chr7_1:17590557-17590576 | Msa1012490:CDS | 25.0% |
| ! | AGTTAAAATCCCATATGATA+TGG | + | chr7_1:17590569-17590588 | None:intergenic | 25.0% |
| !! | TTATCTTTTCCCTAATTTAG+AGG | - | chr7_1:17590957-17590976 | Msa1012490:intron | 25.0% |
| ! | ATTTCTCTTATCATAGACAT+CGG | + | chr7_1:17591314-17591333 | None:intergenic | 25.0% |
| !! | TTCTTCAAGTTTCTTAACAA+GGG | - | chr7_1:17591694-17591713 | Msa1012490:CDS | 25.0% |
| !! | TGCTTTTAACACCATAATTT+TGG | + | chr7_1:17591745-17591764 | None:intergenic | 25.0% |
| ! | ACATCAGAAGTAAATTTATG+AGG | + | chr7_1:17591779-17591798 | None:intergenic | 25.0% |
| !! | GTAAGAAATAACAATCCTTT+TGG | - | chr7_1:17591797-17591816 | Msa1012490:CDS | 25.0% |
| !!! | AACTATGAACAATGGATTAA+GGG | - | chr7_1:17591859-17591878 | Msa1012490:CDS | 25.0% |
| ! | TAGTCCAAATAACAATGAAA+CGG | - | chr7_1:17591886-17591905 | Msa1012490:CDS | 25.0% |
| ! | ACATATTGGGAAATATGTTA+TGG | - | chr7_1:17590059-17590078 | Msa1012490:CDS | 25.0% |
| !! | TTAAGAAACAAAAGCTTGTT+TGG | - | chr7_1:17590223-17590242 | Msa1012490:CDS | 25.0% |
| ! | ATTTGACAACCATATCATAT+GGG | - | chr7_1:17590557-17590576 | Msa1012490:CDS | 25.0% |
| ! | AGTTAAAATCCCATATGATA+TGG | + | chr7_1:17590569-17590588 | None:intergenic | 25.0% |
| !! | TTATCTTTTCCCTAATTTAG+AGG | - | chr7_1:17590957-17590976 | Msa1012490:intron | 25.0% |
| ! | ATTTCTCTTATCATAGACAT+CGG | + | chr7_1:17591314-17591333 | None:intergenic | 25.0% |
| !! | TTCTTCAAGTTTCTTAACAA+GGG | - | chr7_1:17591694-17591713 | Msa1012490:CDS | 25.0% |
| !! | TGCTTTTAACACCATAATTT+TGG | + | chr7_1:17591745-17591764 | None:intergenic | 25.0% |
| ! | ACATCAGAAGTAAATTTATG+AGG | + | chr7_1:17591779-17591798 | None:intergenic | 25.0% |
| !! | GTAAGAAATAACAATCCTTT+TGG | - | chr7_1:17591797-17591816 | Msa1012490:CDS | 25.0% |
| !!! | AACTATGAACAATGGATTAA+GGG | - | chr7_1:17591859-17591878 | Msa1012490:CDS | 25.0% |
| ! | TAGTCCAAATAACAATGAAA+CGG | - | chr7_1:17591886-17591905 | Msa1012490:CDS | 25.0% |
| CTGAAGACTTCAAACATATT+GGG | - | chr7_1:17590046-17590065 | Msa1012490:CDS | 30.0% | |
| AGAAAGAATAAAGAATGCCA+AGG | - | chr7_1:17590180-17590199 | Msa1012490:CDS | 30.0% | |
| ! | AGAAACATTTTGTGGAGATA+AGG | + | chr7_1:17590252-17590271 | None:intergenic | 30.0% |
| ACTTACTTTCCAATCCAATT+TGG | + | chr7_1:17590287-17590306 | None:intergenic | 30.0% | |
| TACTTCTTCCAACCATTAAT+CGG | - | chr7_1:17590377-17590396 | Msa1012490:CDS | 30.0% | |
| TTTCATTGTTGGATTGATAG+TGG | + | chr7_1:17590457-17590476 | None:intergenic | 30.0% | |
| CCTCAAGTATATTTCATTGT+TGG | + | chr7_1:17590468-17590487 | None:intergenic | 30.0% | |
| CCAACAATGAAATATACTTG+AGG | - | chr7_1:17590465-17590484 | Msa1012490:CDS | 30.0% | |
| CATTTGACAACCATATCATA+TGG | - | chr7_1:17590556-17590575 | Msa1012490:CDS | 30.0% | |
| ! | GTTTAACTTTGTAACCTCAA+GGG | + | chr7_1:17590596-17590615 | None:intergenic | 30.0% |
| ! | AGTTTAACTTTGTAACCTCA+AGG | + | chr7_1:17590597-17590616 | None:intergenic | 30.0% |
| ACACCACTATCATTGTTTAT+AGG | - | chr7_1:17590647-17590666 | Msa1012490:CDS | 30.0% | |
| !!! | GATGATAGGTAGTTTGTTTT+TGG | + | chr7_1:17590831-17590850 | None:intergenic | 30.0% |
| ! | TACCCCTAAAATTAAGTTGT+TGG | - | chr7_1:17590889-17590908 | Msa1012490:CDS | 30.0% |
| ! | AGCCAACAACTTAATTTTAG+GGG | + | chr7_1:17590894-17590913 | None:intergenic | 30.0% |
| ! | GAGCCAACAACTTAATTTTA+GGG | + | chr7_1:17590895-17590914 | None:intergenic | 30.0% |
| ! | AGAGCCAACAACTTAATTTT+AGG | + | chr7_1:17590896-17590915 | None:intergenic | 30.0% |
| ! | ATGATCTCCAGAATTTTCTT+TGG | + | chr7_1:17590988-17591007 | None:intergenic | 30.0% |
| ! | TTCAAGATTTGGAACAAGTT+AGG | - | chr7_1:17591492-17591511 | Msa1012490:intron | 30.0% |
| ATAACAGCTATGATCAAAAC+AGG | - | chr7_1:17591555-17591574 | Msa1012490:intron | 30.0% | |
| ! | TTTTCGCTTGAAAAATTGGA+AGG | + | chr7_1:17591601-17591620 | None:intergenic | 30.0% |
| ! | GAGTTTTTCGCTTGAAAAAT+TGG | + | chr7_1:17591605-17591624 | None:intergenic | 30.0% |
| TCTATATGATGAAAAGCTAG+TGG | + | chr7_1:17591645-17591664 | None:intergenic | 30.0% | |
| ! | CTTCTTCAAGTTTCTTAACA+AGG | - | chr7_1:17591693-17591712 | Msa1012490:CDS | 30.0% |
| TTATTCAGCTGAATTCCAAA+AGG | + | chr7_1:17591815-17591834 | None:intergenic | 30.0% | |
| ! | TTTGGAATTCAGCTGAATAA+TGG | - | chr7_1:17591815-17591834 | Msa1012490:CDS | 30.0% |
| !! | GAACTATGAACAATGGATTA+AGG | - | chr7_1:17591858-17591877 | Msa1012490:CDS | 30.0% |
| AGTCCAAATAACAATGAAAC+GGG | - | chr7_1:17591887-17591906 | Msa1012490:CDS | 30.0% | |
| CTGAAGACTTCAAACATATT+GGG | - | chr7_1:17590046-17590065 | Msa1012490:CDS | 30.0% | |
| AGAAAGAATAAAGAATGCCA+AGG | - | chr7_1:17590180-17590199 | Msa1012490:CDS | 30.0% | |
| ! | AGAAACATTTTGTGGAGATA+AGG | + | chr7_1:17590252-17590271 | None:intergenic | 30.0% |
| ACTTACTTTCCAATCCAATT+TGG | + | chr7_1:17590287-17590306 | None:intergenic | 30.0% | |
| TACTTCTTCCAACCATTAAT+CGG | - | chr7_1:17590377-17590396 | Msa1012490:CDS | 30.0% | |
| TTTCATTGTTGGATTGATAG+TGG | + | chr7_1:17590457-17590476 | None:intergenic | 30.0% | |
| CCTCAAGTATATTTCATTGT+TGG | + | chr7_1:17590468-17590487 | None:intergenic | 30.0% | |
| CCAACAATGAAATATACTTG+AGG | - | chr7_1:17590465-17590484 | Msa1012490:CDS | 30.0% | |
| CATTTGACAACCATATCATA+TGG | - | chr7_1:17590556-17590575 | Msa1012490:CDS | 30.0% | |
| ! | GTTTAACTTTGTAACCTCAA+GGG | + | chr7_1:17590596-17590615 | None:intergenic | 30.0% |
| ! | AGTTTAACTTTGTAACCTCA+AGG | + | chr7_1:17590597-17590616 | None:intergenic | 30.0% |
| ACACCACTATCATTGTTTAT+AGG | - | chr7_1:17590647-17590666 | Msa1012490:CDS | 30.0% | |
| !!! | GATGATAGGTAGTTTGTTTT+TGG | + | chr7_1:17590831-17590850 | None:intergenic | 30.0% |
| ! | TACCCCTAAAATTAAGTTGT+TGG | - | chr7_1:17590889-17590908 | Msa1012490:CDS | 30.0% |
| ! | AGCCAACAACTTAATTTTAG+GGG | + | chr7_1:17590894-17590913 | None:intergenic | 30.0% |
| ! | GAGCCAACAACTTAATTTTA+GGG | + | chr7_1:17590895-17590914 | None:intergenic | 30.0% |
| ! | AGAGCCAACAACTTAATTTT+AGG | + | chr7_1:17590896-17590915 | None:intergenic | 30.0% |
| ! | ATGATCTCCAGAATTTTCTT+TGG | + | chr7_1:17590988-17591007 | None:intergenic | 30.0% |
| ! | TTCAAGATTTGGAACAAGTT+AGG | - | chr7_1:17591492-17591511 | Msa1012490:intron | 30.0% |
| ATAACAGCTATGATCAAAAC+AGG | - | chr7_1:17591555-17591574 | Msa1012490:intron | 30.0% | |
| ! | TTTTCGCTTGAAAAATTGGA+AGG | + | chr7_1:17591601-17591620 | None:intergenic | 30.0% |
| ! | GAGTTTTTCGCTTGAAAAAT+TGG | + | chr7_1:17591605-17591624 | None:intergenic | 30.0% |
| TCTATATGATGAAAAGCTAG+TGG | + | chr7_1:17591645-17591664 | None:intergenic | 30.0% | |
| ! | CTTCTTCAAGTTTCTTAACA+AGG | - | chr7_1:17591693-17591712 | Msa1012490:CDS | 30.0% |
| TTATTCAGCTGAATTCCAAA+AGG | + | chr7_1:17591815-17591834 | None:intergenic | 30.0% | |
| ! | TTTGGAATTCAGCTGAATAA+TGG | - | chr7_1:17591815-17591834 | Msa1012490:CDS | 30.0% |
| !! | GAACTATGAACAATGGATTA+AGG | - | chr7_1:17591858-17591877 | Msa1012490:CDS | 30.0% |
| AGTCCAAATAACAATGAAAC+GGG | - | chr7_1:17591887-17591906 | Msa1012490:CDS | 30.0% | |
| AGTGTCTTCGAGATTAAACT+TGG | + | chr7_1:17589985-17590004 | None:intergenic | 35.0% | |
| ATCTCGAAGACACTAGAAAA+TGG | - | chr7_1:17589991-17590010 | Msa1012490:CDS | 35.0% | |
| TTGAAGTCTTCAGCACAAAA+AGG | + | chr7_1:17590039-17590058 | None:intergenic | 35.0% | |
| GCTGAAGACTTCAAACATAT+TGG | - | chr7_1:17590045-17590064 | Msa1012490:CDS | 35.0% | |
| ! | CAATGCTTCTTTTCGTTCTT+AGG | + | chr7_1:17590156-17590175 | None:intergenic | 35.0% |
| ! | TAGCAAGCAGAAACATTTTG+TGG | + | chr7_1:17590260-17590279 | None:intergenic | 35.0% |
| TGCTATTGACCAAATTGGAT+TGG | - | chr7_1:17590275-17590294 | Msa1012490:CDS | 35.0% | |
| AAAATGGCTCAACCGATTAA+TGG | + | chr7_1:17590392-17590411 | None:intergenic | 35.0% | |
| CAGACAATACCTCAGAAAAA+TGG | + | chr7_1:17590408-17590427 | None:intergenic | 35.0% | |
| TTAAACTCTTACCACTAAGC+TGG | - | chr7_1:17590610-17590629 | Msa1012490:CDS | 35.0% | |
| AGGCCTATAAACAATGATAG+TGG | + | chr7_1:17590653-17590672 | None:intergenic | 35.0% | |
| AAATGTAGCAAGTCACTTAC+AGG | - | chr7_1:17591032-17591051 | Msa1012490:intron | 35.0% | |
| ! | GTTTGCAAATATGGAAGTGT+TGG | + | chr7_1:17591368-17591387 | None:intergenic | 35.0% |
| ACTTCCATATTTGCAAACAC+TGG | - | chr7_1:17591370-17591389 | Msa1012490:intron | 35.0% | |
| TATGCCAGTGTTTGCAAATA+TGG | + | chr7_1:17591377-17591396 | None:intergenic | 35.0% | |
| GTGTTGGAAATTGGTTGAAA+TGG | + | chr7_1:17591430-17591449 | None:intergenic | 35.0% | |
| CAACATGATGTGTTGGAAAT+TGG | + | chr7_1:17591439-17591458 | None:intergenic | 35.0% | |
| AATTGGTCAACATGATGTGT+TGG | + | chr7_1:17591446-17591465 | None:intergenic | 35.0% | |
| TCCTTATATACAAAAAGGGC+TGG | - | chr7_1:17591466-17591485 | Msa1012490:intron | 35.0% | |
| TAGGCTTGGAAAATCAAAGT+TGG | - | chr7_1:17591511-17591530 | Msa1012490:intron | 35.0% | |
| GTTATTCTCTGCAACAACAT+CGG | + | chr7_1:17591540-17591559 | None:intergenic | 35.0% | |
| AGCTATGATCAAAACAGGTT+TGG | - | chr7_1:17591560-17591579 | Msa1012490:intron | 35.0% | |
| GCGAAAAACTCATTCAATGA+TGG | - | chr7_1:17591614-17591633 | Msa1012490:CDS | 35.0% | |
| TCATCATATAGAGCTGAACA+AGG | - | chr7_1:17591653-17591672 | Msa1012490:CDS | 35.0% | |
| GGAATTGGAACTATGAACAA+TGG | - | chr7_1:17591851-17591870 | Msa1012490:CDS | 35.0% | |
| GTCCAAATAACAATGAAACG+GGG | - | chr7_1:17591888-17591907 | Msa1012490:CDS | 35.0% | |
| AAATAACAATGAAACGGGGA+GGG | - | chr7_1:17591892-17591911 | Msa1012490:CDS | 35.0% | |
| AGTGTCTTCGAGATTAAACT+TGG | + | chr7_1:17589985-17590004 | None:intergenic | 35.0% | |
| ATCTCGAAGACACTAGAAAA+TGG | - | chr7_1:17589991-17590010 | Msa1012490:CDS | 35.0% | |
| TTGAAGTCTTCAGCACAAAA+AGG | + | chr7_1:17590039-17590058 | None:intergenic | 35.0% | |
| GCTGAAGACTTCAAACATAT+TGG | - | chr7_1:17590045-17590064 | Msa1012490:CDS | 35.0% | |
| ! | CAATGCTTCTTTTCGTTCTT+AGG | + | chr7_1:17590156-17590175 | None:intergenic | 35.0% |
| ! | TAGCAAGCAGAAACATTTTG+TGG | + | chr7_1:17590260-17590279 | None:intergenic | 35.0% |
| TGCTATTGACCAAATTGGAT+TGG | - | chr7_1:17590275-17590294 | Msa1012490:CDS | 35.0% | |
| AAAATGGCTCAACCGATTAA+TGG | + | chr7_1:17590392-17590411 | None:intergenic | 35.0% | |
| CAGACAATACCTCAGAAAAA+TGG | + | chr7_1:17590408-17590427 | None:intergenic | 35.0% | |
| TTAAACTCTTACCACTAAGC+TGG | - | chr7_1:17590610-17590629 | Msa1012490:CDS | 35.0% | |
| AGGCCTATAAACAATGATAG+TGG | + | chr7_1:17590653-17590672 | None:intergenic | 35.0% | |
| AAATGTAGCAAGTCACTTAC+AGG | - | chr7_1:17591032-17591051 | Msa1012490:intron | 35.0% | |
| ! | GTTTGCAAATATGGAAGTGT+TGG | + | chr7_1:17591368-17591387 | None:intergenic | 35.0% |
| ACTTCCATATTTGCAAACAC+TGG | - | chr7_1:17591370-17591389 | Msa1012490:intron | 35.0% | |
| TATGCCAGTGTTTGCAAATA+TGG | + | chr7_1:17591377-17591396 | None:intergenic | 35.0% | |
| GTGTTGGAAATTGGTTGAAA+TGG | + | chr7_1:17591430-17591449 | None:intergenic | 35.0% | |
| CAACATGATGTGTTGGAAAT+TGG | + | chr7_1:17591439-17591458 | None:intergenic | 35.0% | |
| AATTGGTCAACATGATGTGT+TGG | + | chr7_1:17591446-17591465 | None:intergenic | 35.0% | |
| TCCTTATATACAAAAAGGGC+TGG | - | chr7_1:17591466-17591485 | Msa1012490:intron | 35.0% | |
| TAGGCTTGGAAAATCAAAGT+TGG | - | chr7_1:17591511-17591530 | Msa1012490:intron | 35.0% | |
| GTTATTCTCTGCAACAACAT+CGG | + | chr7_1:17591540-17591559 | None:intergenic | 35.0% | |
| AGCTATGATCAAAACAGGTT+TGG | - | chr7_1:17591560-17591579 | Msa1012490:intron | 35.0% | |
| GCGAAAAACTCATTCAATGA+TGG | - | chr7_1:17591614-17591633 | Msa1012490:CDS | 35.0% | |
| TCATCATATAGAGCTGAACA+AGG | - | chr7_1:17591653-17591672 | Msa1012490:CDS | 35.0% | |
| GGAATTGGAACTATGAACAA+TGG | - | chr7_1:17591851-17591870 | Msa1012490:CDS | 35.0% | |
| GTCCAAATAACAATGAAACG+GGG | - | chr7_1:17591888-17591907 | Msa1012490:CDS | 35.0% | |
| AAATAACAATGAAACGGGGA+GGG | - | chr7_1:17591892-17591911 | Msa1012490:CDS | 35.0% | |
| CTTGAATATCTCTCTCTCCT+TGG | + | chr7_1:17590200-17590219 | None:intergenic | 40.0% | |
| !! | CTGCTTGCTATTGACCAAAT+TGG | - | chr7_1:17590270-17590289 | Msa1012490:CDS | 40.0% |
| !! | TTCTGAGGTATTGTCTGCTT+TGG | - | chr7_1:17590411-17590430 | Msa1012490:CDS | 40.0% |
| !!! | GATTTTAACTTCCTCCCTTG+AGG | - | chr7_1:17590579-17590598 | Msa1012490:CDS | 40.0% |
| TAACTTTGTAACCTCAAGGG+AGG | + | chr7_1:17590593-17590612 | None:intergenic | 40.0% | |
| TTGGCACAGCCTCTAAATTA+GGG | + | chr7_1:17590969-17590988 | None:intergenic | 40.0% | |
| TTTGGCACAGCCTCTAAATT+AGG | + | chr7_1:17590970-17590989 | None:intergenic | 40.0% | |
| ! | ACATTTTCTCTGGTCACGTT+AGG | + | chr7_1:17591018-17591037 | None:intergenic | 40.0% |
| !!! | GTGACTTGCTACATTTTCTC+TGG | + | chr7_1:17591028-17591047 | None:intergenic | 40.0% |
| AGATGTTGCAGAGAAAGGAA+TGG | - | chr7_1:17591238-17591257 | Msa1012490:intron | 40.0% | |
| ACACTGGCATATCAAACAAG+AGG | - | chr7_1:17591386-17591405 | Msa1012490:intron | 40.0% | |
| ! | GCCAGCCCTTTTTGTATATA+AGG | + | chr7_1:17591470-17591489 | None:intergenic | 40.0% |
| ! | GATTTGGAACAAGTTAGGCT+TGG | - | chr7_1:17591497-17591516 | Msa1012490:intron | 40.0% |
| TAGAGCTGAACAAGGATTGA+TGG | - | chr7_1:17591661-17591680 | Msa1012490:CDS | 40.0% | |
| ! | ATTCAGCTGAATAATGGAGC+AGG | - | chr7_1:17591821-17591840 | Msa1012490:CDS | 40.0% |
| ! | AATAATGGAGCAGGAATGGT+TGG | - | chr7_1:17591830-17591849 | Msa1012490:CDS | 40.0% |
| ! | CTCCCCGTTTCATTGTTATT+TGG | + | chr7_1:17591893-17591912 | None:intergenic | 40.0% |
| CAAATAACAATGAAACGGGG+AGG | - | chr7_1:17591891-17591910 | Msa1012490:CDS | 40.0% | |
| CTTGAATATCTCTCTCTCCT+TGG | + | chr7_1:17590200-17590219 | None:intergenic | 40.0% | |
| !! | CTGCTTGCTATTGACCAAAT+TGG | - | chr7_1:17590270-17590289 | Msa1012490:CDS | 40.0% |
| !! | TTCTGAGGTATTGTCTGCTT+TGG | - | chr7_1:17590411-17590430 | Msa1012490:CDS | 40.0% |
| !!! | GATTTTAACTTCCTCCCTTG+AGG | - | chr7_1:17590579-17590598 | Msa1012490:CDS | 40.0% |
| TAACTTTGTAACCTCAAGGG+AGG | + | chr7_1:17590593-17590612 | None:intergenic | 40.0% | |
| TTGGCACAGCCTCTAAATTA+GGG | + | chr7_1:17590969-17590988 | None:intergenic | 40.0% | |
| TTTGGCACAGCCTCTAAATT+AGG | + | chr7_1:17590970-17590989 | None:intergenic | 40.0% | |
| ! | ACATTTTCTCTGGTCACGTT+AGG | + | chr7_1:17591018-17591037 | None:intergenic | 40.0% |
| !!! | GTGACTTGCTACATTTTCTC+TGG | + | chr7_1:17591028-17591047 | None:intergenic | 40.0% |
| AGATGTTGCAGAGAAAGGAA+TGG | - | chr7_1:17591238-17591257 | Msa1012490:intron | 40.0% | |
| ACACTGGCATATCAAACAAG+AGG | - | chr7_1:17591386-17591405 | Msa1012490:intron | 40.0% | |
| ! | GCCAGCCCTTTTTGTATATA+AGG | + | chr7_1:17591470-17591489 | None:intergenic | 40.0% |
| ! | GATTTGGAACAAGTTAGGCT+TGG | - | chr7_1:17591497-17591516 | Msa1012490:intron | 40.0% |
| TAGAGCTGAACAAGGATTGA+TGG | - | chr7_1:17591661-17591680 | Msa1012490:CDS | 40.0% | |
| ! | ATTCAGCTGAATAATGGAGC+AGG | - | chr7_1:17591821-17591840 | Msa1012490:CDS | 40.0% |
| ! | AATAATGGAGCAGGAATGGT+TGG | - | chr7_1:17591830-17591849 | Msa1012490:CDS | 40.0% |
| ! | CTCCCCGTTTCATTGTTATT+TGG | + | chr7_1:17591893-17591912 | None:intergenic | 40.0% |
| CAAATAACAATGAAACGGGG+AGG | - | chr7_1:17591891-17591910 | Msa1012490:CDS | 40.0% | |
| TGGCTCAACCGATTAATGGT+TGG | + | chr7_1:17590388-17590407 | None:intergenic | 45.0% | |
| !!! | TCGGTTGAGCCATTTTTCTG+AGG | - | chr7_1:17590396-17590415 | Msa1012490:CDS | 45.0% |
| GGCTGTGCCAAAGAAAATTC+TGG | - | chr7_1:17590978-17590997 | Msa1012490:intron | 45.0% | |
| GTTGCAGAGAAAGGAATGGT+TGG | - | chr7_1:17591242-17591261 | Msa1012490:intron | 45.0% | |
| !! | CTCACAGAGCTCTAAGATCA+AGG | - | chr7_1:17591273-17591292 | Msa1012490:intron | 45.0% |
| ! | GCTGAATAATGGAGCAGGAA+TGG | - | chr7_1:17591826-17591845 | Msa1012490:CDS | 45.0% |
| !! | AGTGGAAGAGAGTTTCTAGC+AGG | - | chr7_1:17591915-17591934 | Msa1012490:CDS | 45.0% |
| TGGCTCAACCGATTAATGGT+TGG | + | chr7_1:17590388-17590407 | None:intergenic | 45.0% | |
| !!! | TCGGTTGAGCCATTTTTCTG+AGG | - | chr7_1:17590396-17590415 | Msa1012490:CDS | 45.0% |
| GGCTGTGCCAAAGAAAATTC+TGG | - | chr7_1:17590978-17590997 | Msa1012490:intron | 45.0% | |
| GTTGCAGAGAAAGGAATGGT+TGG | - | chr7_1:17591242-17591261 | Msa1012490:intron | 45.0% | |
| !! | CTCACAGAGCTCTAAGATCA+AGG | - | chr7_1:17591273-17591292 | Msa1012490:intron | 45.0% |
| ! | GCTGAATAATGGAGCAGGAA+TGG | - | chr7_1:17591826-17591845 | Msa1012490:CDS | 45.0% |
| !! | AGTGGAAGAGAGTTTCTAGC+AGG | - | chr7_1:17591915-17591934 | Msa1012490:CDS | 45.0% |
| CTGCGAGATGTTGCAGAGAA+AGG | - | chr7_1:17591233-17591252 | Msa1012490:intron | 50.0% | |
| GCAGAGAAAGGAATGGTTGG+AGG | - | chr7_1:17591245-17591264 | Msa1012490:intron | 50.0% | |
| !! | AGGGCTGGCTCTTCAAGATT+TGG | - | chr7_1:17591481-17591500 | Msa1012490:intron | 50.0% |
| GGAGCAGGAATGGTTGGAAT+TGG | - | chr7_1:17591836-17591855 | Msa1012490:CDS | 50.0% | |
| CTGCGAGATGTTGCAGAGAA+AGG | - | chr7_1:17591233-17591252 | Msa1012490:intron | 50.0% | |
| GCAGAGAAAGGAATGGTTGG+AGG | - | chr7_1:17591245-17591264 | Msa1012490:intron | 50.0% | |
| !! | AGGGCTGGCTCTTCAAGATT+TGG | - | chr7_1:17591481-17591500 | Msa1012490:intron | 50.0% |
| GGAGCAGGAATGGTTGGAAT+TGG | - | chr7_1:17591836-17591855 | Msa1012490:CDS | 50.0% | |
| TGCACTAGCTGCCAGCTTAG+TGG | + | chr7_1:17590624-17590643 | None:intergenic | 55.0% | |
| ACAATGAAACGGGGAGGGAG+TGG | - | chr7_1:17591897-17591916 | Msa1012490:CDS | 55.0% | |
| TGCACTAGCTGCCAGCTTAG+TGG | + | chr7_1:17590624-17590643 | None:intergenic | 55.0% | |
| ACAATGAAACGGGGAGGGAG+TGG | - | chr7_1:17591897-17591916 | Msa1012490:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 17589964 | 17591946 | 17589964 | ID=Msa1012490;Name=Msa1012490 |
| chr7_1 | mRNA | 17589964 | 17591946 | 17589964 | ID=Msa1012490-mRNA-1;Parent=Msa1012490;Name=Msa1012490-mRNA-1;_AED=0.12;_eAED=0.16;_QI=0|0|0|1|1|1|3|0|380 |
| chr7_1 | exon | 17591610 | 17591946 | 17591610 | ID=Msa1012490-mRNA-1:exon:4472;Parent=Msa1012490-mRNA-1 |
| chr7_1 | exon | 17590857 | 17590933 | 17590857 | ID=Msa1012490-mRNA-1:exon:4471;Parent=Msa1012490-mRNA-1 |
| chr7_1 | exon | 17589964 | 17590692 | 17589964 | ID=Msa1012490-mRNA-1:exon:4470;Parent=Msa1012490-mRNA-1 |
| chr7_1 | CDS | 17591610 | 17591946 | 17591610 | ID=Msa1012490-mRNA-1:cds;Parent=Msa1012490-mRNA-1 |
| chr7_1 | CDS | 17590857 | 17590933 | 17590857 | ID=Msa1012490-mRNA-1:cds;Parent=Msa1012490-mRNA-1 |
| chr7_1 | CDS | 17589964 | 17590692 | 17589964 | ID=Msa1012490-mRNA-1:cds;Parent=Msa1012490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
