AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1012580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1012580 MtrunA17_Chr7g0224051 90.553 1175 78 4 46 1217 1 1145 0.0 2177
Msa1012580 MtrunA17_Chr3g0114161 75.856 1226 236 14 20 1188 25 1247 0.0 1820
Msa1012580 MtrunA17_Chr1g0191141 69.397 879 245 11 322 1189 238 1103 0.0 1194
Msa1012580 MtrunA17_Chr1g0191141 57.031 256 98 5 20 268 8 258 2.94e-75 271
Msa1012580 MtrunA17_Chr5g0437621 63.213 859 281 13 355 1187 453 1302 0.0 1063
Msa1012580 MtrunA17_Chr5g0437621 44.954 327 150 8 4 313 3 316 8.66e-68 250
Msa1012580 MtrunA17_Chr7g0233021 36.630 718 388 22 478 1169 537 1213 3.40e-113 383
Msa1012580 MtrunA17_Chr7g0233031 33.826 745 417 19 460 1175 535 1232 1.28e-112 382
Msa1012580 MtrunA17_Chr7g0224031 81.279 219 39 2 751 968 25 242 8.17e-112 349
Msa1012580 MtrunA17_Chr7g0225791 33.511 752 439 17 460 1188 577 1290 9.83e-112 380
Msa1012580 MtrunA17_Chr7g0232971 33.506 773 440 21 445 1188 571 1298 1.10e-107 369
Msa1012580 MtrunA17_Chr4g0047081 33.836 730 427 15 478 1188 548 1240 1.17e-107 367
Msa1012580 MtrunA17_Chr7g0232991 33.122 631 356 15 595 1188 61 662 1.86e-93 315
Msa1012580 MtrunA17_Chr2g0296421 31.330 699 387 20 457 1144 385 1001 1.35e-88 310
Msa1012580 MtrunA17_Chr8g0352361 30.835 707 414 18 443 1144 216 852 2.01e-88 306
Msa1012580 MtrunA17_Chr7g0233001 32.907 547 328 12 657 1188 3 525 6.38e-76 261
Msa1012580 MtrunA17_Chr7g0224021 76.991 113 24 1 576 688 1 111 6.32e-54 184
Msa1012580 MtrunA17_Chr2g0320781 33.745 243 154 4 896 1137 4 240 2.28e-37 140
Msa1012580 MtrunA17_Chr5g0393461 23.284 670 380 24 569 1196 163 740 1.27e-31 134
Msa1012580 MtrunA17_Chr5g0403921 26.884 584 336 20 641 1209 206 713 2.14e-30 129
Msa1012580 MtrunA17_Chr8g0384531 24.957 581 326 22 594 1136 372 880 1.03e-29 128
Msa1012580 MtrunA17_Chr5g0394201 24.472 568 324 18 641 1196 385 859 1.04e-23 108
Msa1012580 MtrunA17_Chr4g0052341 25.000 540 317 20 637 1160 763 1230 5.33e-23 107
Msa1012580 MtrunA17_Chr1g0190391 29.289 239 139 9 600 833 576 789 4.08e-22 103
Msa1012580 MtrunA17_Chr3g0137091 24.395 496 303 16 641 1127 311 743 2.90e-21 101
Msa1012580 MtrunA17_Chr1g0205891 25.251 499 283 15 641 1127 398 818 3.80e-21 100
Msa1012580 MtrunA17_Chr4g0040301 26.174 596 292 27 647 1158 18 549 7.90e-21 99.0
Msa1012580 MtrunA17_Chr4g0066741 24.078 515 298 17 641 1146 210 640 4.94e-20 97.1
Msa1012580 MtrunA17_Chr2g0286291 23.930 514 300 17 641 1146 213 643 7.92e-19 92.8
Msa1012580 MtrunA17_Chr1g0190381 34.969 163 94 4 996 1149 196 355 1.71e-18 90.9
Msa1012580 MtrunA17_Chr4g0066651 21.869 567 367 14 647 1206 1017 1514 1.42e-16 85.9
Msa1012580 MtrunA17_Chr3g0114111 64.815 54 19 0 1142 1195 1 54 4.76e-14 68.6
Msa1012580 MtrunA17_Chr7g0257101 31.250 176 113 5 971 1145 1173 1341 1.35e-12 72.8
Msa1012580 MtrunA17_Chr3g0095091 29.670 182 117 4 957 1136 856 1028 1.44e-12 72.8
Msa1012580 MtrunA17_Chr5g0442141 30.168 179 114 4 957 1133 902 1071 2.25e-12 72.0
Msa1012580 MtrunA17_Chr1g0183681 30.714 140 91 3 1005 1144 750 883 4.58e-12 70.9
Msa1012580 MtrunA17_Chr2g0320751 35.000 120 72 3 1008 1127 868 981 2.73e-11 68.2
Msa1012580 MtrunA17_Chr1g0168031 29.932 147 95 4 983 1127 978 1118 7.43e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1012580 AT3G42670.2 60.714 784 280 11 422 1187 480 1253 0.0 944
Msa1012580 AT3G42670.2 35.110 319 190 7 4 319 3 307 1.62e-48 189
Msa1012580 AT3G42670.3 60.714 784 280 11 422 1187 480 1253 0.0 944
Msa1012580 AT3G42670.3 35.110 319 190 7 4 319 3 307 1.62e-48 189
Msa1012580 AT3G42670.1 60.714 784 280 11 422 1187 480 1253 0.0 944
Msa1012580 AT3G42670.1 35.110 319 190 7 4 319 3 307 1.62e-48 189
Msa1012580 AT3G42670.4 60.560 786 280 11 422 1187 480 1255 0.0 944
Msa1012580 AT3G42670.4 35.110 319 190 7 4 319 3 307 1.67e-48 189
Msa1012580 AT5G20420.1 60.614 782 283 12 423 1187 486 1259 0.0 939
Msa1012580 AT5G20420.1 35.843 332 172 11 4 317 2 310 8.52e-45 177
Msa1012580 AT3G24340.1 33.062 738 421 16 447 1177 443 1114 1.96e-107 365
Msa1012580 AT1G05490.1 32.102 785 436 25 462 1209 685 1409 3.33e-105 363
Msa1012580 AT2G16390.2 31.701 735 407 23 428 1144 193 850 1.88e-89 310
Msa1012580 AT2G16390.1 31.701 735 407 23 428 1144 190 847 2.28e-89 309
Msa1012580 AT2G21450.3 32.214 655 362 20 508 1144 92 682 9.87e-85 292
Msa1012580 AT2G21450.1 32.214 655 362 20 508 1144 183 773 1.68e-84 294
Msa1012580 AT2G21450.2 32.214 655 362 20 508 1144 190 780 2.35e-84 293
Msa1012580 AT3G19210.2 25.199 627 358 23 606 1197 180 730 3.30e-31 133
Msa1012580 AT3G19210.1 24.483 629 362 22 606 1197 180 732 1.12e-30 131
Msa1012580 AT3G19210.3 24.483 629 362 22 606 1197 180 732 1.57e-30 130
Msa1012580 AT5G63950.1 25.357 560 325 19 606 1136 377 872 2.16e-29 127
Msa1012580 AT5G63950.2 25.540 556 312 20 606 1136 377 855 4.51e-28 123
Msa1012580 AT1G08600.4 28.807 243 131 8 602 833 715 926 6.14e-23 107
Msa1012580 AT1G08600.4 33.735 166 92 4 996 1149 1123 1282 1.37e-17 89.7
Msa1012580 AT1G08600.3 28.807 243 131 8 602 833 715 926 6.14e-23 107
Msa1012580 AT1G08600.3 33.735 166 92 4 996 1149 1123 1282 1.37e-17 89.7
Msa1012580 AT1G08600.2 28.807 243 131 8 602 833 715 926 6.14e-23 107
Msa1012580 AT1G08600.2 33.735 166 92 4 996 1149 1123 1282 1.37e-17 89.7
Msa1012580 AT3G06010.1 25.874 572 312 23 641 1196 425 900 7.83e-22 103
Msa1012580 AT1G03750.1 24.712 607 302 25 639 1158 159 697 2.39e-21 101
Msa1012580 AT4G31900.1 23.732 552 292 20 596 1127 214 656 3.91e-21 100
Msa1012580 AT4G31900.2 23.732 552 292 20 596 1127 173 615 3.94e-21 100
Msa1012580 AT4G31900.3 23.732 552 292 20 596 1127 214 656 4.95e-21 100
Msa1012580 AT2G25170.1 24.803 508 288 20 640 1127 294 727 6.64e-19 94.0
Msa1012580 AT2G25170.4 24.803 508 288 20 640 1127 294 727 6.64e-19 94.0
Msa1012580 AT2G25170.2 24.803 508 288 20 640 1127 311 744 8.04e-19 93.6
Msa1012580 AT2G25170.3 24.803 508 288 20 640 1127 320 753 8.77e-19 93.6
Msa1012580 AT3G06400.2 23.002 513 306 15 641 1146 211 641 3.37e-18 91.3
Msa1012580 AT3G06400.3 23.002 513 306 15 641 1146 211 641 3.61e-18 91.3
Msa1012580 AT3G06400.1 23.002 513 306 15 641 1146 211 641 3.70e-18 91.3
Msa1012580 AT1G08600.1 33.735 166 92 4 996 1149 1102 1261 1.36e-17 89.7
Msa1012580 AT5G66750.1 31.731 208 126 6 1006 1212 540 732 4.73e-17 87.4
Msa1012580 AT2G44980.1 25.714 525 288 22 647 1150 80 523 2.87e-14 78.6
Msa1012580 AT3G57300.1 34.483 145 89 3 1006 1150 1222 1360 1.81e-13 76.3
Msa1012580 AT3G57300.4 34.483 145 89 3 1006 1150 1222 1360 1.81e-13 76.3
Msa1012580 AT3G57300.2 34.483 145 89 3 1006 1150 1255 1393 2.16e-13 75.9
Msa1012580 AT2G44980.3 24.908 546 299 23 640 1150 72 541 3.04e-13 75.1
Msa1012580 AT2G44980.2 25.046 539 293 23 647 1150 80 542 5.20e-13 74.3
Msa1012580 AT2G13370.1 30.978 184 110 6 957 1136 910 1080 9.25e-13 73.9
Msa1012580 AT2G13370.2 30.978 184 110 6 957 1136 910 1080 9.25e-13 73.9
Msa1012580 AT2G13370.3 30.978 184 110 6 957 1136 910 1080 9.25e-13 73.9
Msa1012580 AT5G19310.2 29.843 191 121 4 987 1176 427 605 1.38e-12 72.8
Msa1012580 AT5G19310.1 29.843 191 121 4 987 1176 691 869 1.44e-12 73.2
Msa1012580 AT5G43530.1 31.410 156 97 5 975 1127 1094 1242 2.61e-12 72.4
Msa1012580 AT2G28290.1 32.298 161 101 4 1015 1173 1094 1248 3.52e-12 72.0
Msa1012580 AT2G28290.2 32.298 161 101 4 1015 1173 1094 1248 3.55e-12 72.0
Msa1012580 AT2G28290.6 32.298 161 101 4 1015 1173 1095 1249 3.67e-12 72.0
Msa1012580 AT2G28290.5 32.298 161 101 4 1015 1173 1095 1249 3.73e-12 72.0
Msa1012580 AT2G28290.3 32.298 161 101 4 1015 1173 1094 1248 3.76e-12 72.0
Msa1012580 AT2G28290.4 32.298 161 101 4 1015 1173 1094 1248 3.76e-12 72.0
Msa1012580 AT5G05130.1 34.959 123 74 3 1006 1127 725 842 4.93e-12 71.2
Msa1012580 AT2G18760.3 37.500 96 59 1 1049 1144 840 934 1.09e-11 70.1
Msa1012580 AT2G18760.4 37.500 96 59 1 1049 1144 781 875 1.18e-11 70.1
Msa1012580 AT2G18760.1 37.500 96 59 1 1049 1144 781 875 1.18e-11 70.1
Msa1012580 AT2G18760.2 37.500 96 59 1 1049 1144 781 875 1.18e-11 70.1
Msa1012580 AT2G18760.7 37.500 96 59 1 1049 1144 781 875 1.18e-11 70.1
Msa1012580 AT2G18760.5 37.500 96 59 1 1049 1144 781 875 1.18e-11 70.1
Msa1012580 AT2G18760.6 37.500 96 59 1 1049 1144 781 875 1.18e-11 70.1

Find 197 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACACTTACATGAAGAATT+TGG 0.169887 7_1:-17758435 Msa1012580:CDS
GCTCAGAACAAATCTTATTT+TGG 0.176054 7_1:+17756403 None:intergenic
AGCACTTCGTGAACAAATTT+TGG 0.230747 7_1:+17756887 None:intergenic
CTGAAGTGGTTAAGCCTTAT+AGG 0.238613 7_1:-17759228 Msa1012580:CDS
AGGGCTTTCTCTCAAAGTTT+TGG 0.255357 7_1:+17757069 None:intergenic
GAATGAAACCTTCTTTAAAA+AGG 0.258801 7_1:+17759114 None:intergenic
AACCTTGATTTAGTGCTTCT+AGG 0.271299 7_1:+17757016 None:intergenic
TTTGTTTCTTCATTTATAAT+TGG 0.272218 7_1:+17758389 None:intergenic
TATACGTTCAATGAAGAAAT+TGG 0.272322 7_1:-17758041 Msa1012580:CDS
CCTGGAGTTCCAAGACCTTC+TGG 0.279541 7_1:-17757229 Msa1012580:CDS
GAGATTAAACTTACTGGAAT+AGG 0.282799 7_1:+17759589 None:intergenic
AATTCATGGTTCGGATGATA+TGG 0.288963 7_1:-17758591 Msa1012580:CDS
CCATGAATTCGCCTCCTTGC+AGG 0.300379 7_1:+17758605 None:intergenic
GTCCAACCCGATTTGACATT+TGG 0.313761 7_1:+17759611 None:intergenic
AAACAGCATTTGAAGCAATA+AGG 0.314787 7_1:-17759813 Msa1012580:intron
TGATGACTTGTCTGCCATTT+GGG 0.322544 7_1:-17758318 Msa1012580:CDS
CCAGGAAGAACCGTAGGTTT+TGG 0.328085 7_1:+17757247 None:intergenic
TTCCAATGGCCCCTAGAAAA+AGG 0.328596 7_1:-17762128 None:intergenic
TGGTGATGTAAAACATGTTT+TGG 0.329183 7_1:-17757209 Msa1012580:CDS
AGGCCTTCAATCTGATTTGA+TGG 0.332666 7_1:+17758908 None:intergenic
CAGCGGTTCAAAGATACTTC+TGG 0.337244 7_1:-17756192 Msa1012580:CDS
ACAGAAACTGCAGAAGAAAA+TGG 0.339883 7_1:-17756588 Msa1012580:CDS
AAATACTTTCAATGGCAAAA+TGG 0.340921 7_1:-17756293 Msa1012580:CDS
AACTATTATATTGAAGCCTT+TGG 0.344481 7_1:+17759281 None:intergenic
CTGATGACTTGTCTGCCATT+TGG 0.349617 7_1:-17758319 Msa1012580:CDS
CTCTACCTCGAGAGGGTAAC+TGG 0.351257 7_1:+17756553 None:intergenic
CCAAAACCTACGGTTCTTCC+TGG 0.354433 7_1:-17757247 Msa1012580:CDS
CAGCTTCGTGAGGTTGTCTC+TGG 0.354705 7_1:+17759422 None:intergenic
ATCAAATTTGATTTAAGAAA+AGG 0.357435 7_1:-17756428 Msa1012580:CDS
TTGTGGAAGATCCTTCTAAA+TGG 0.362063 7_1:-17755932 Msa1012580:CDS
TCAGATGAATCCCACCTATA+AGG 0.365181 7_1:+17759214 None:intergenic
AAAGAGGTTCTGCTACTTAC+TGG 0.365932 7_1:-17756269 Msa1012580:CDS
TTCATCAACGTTTATGAAAG+TGG 0.366193 7_1:-17756689 Msa1012580:CDS
GTTGATGATAATGTTACTTT+GGG 0.371974 7_1:-17758656 Msa1012580:CDS
TGTTACAATATCAAGTGATT+TGG 0.373273 7_1:-17758681 Msa1012580:CDS
CCTTCTAGAAGGATCAGATT+TGG 0.373446 7_1:-17755775 Msa1012580:CDS
AGAAGAACCTATGTAACGTT+TGG 0.381332 7_1:+17758856 None:intergenic
AATTCCTCTGATACACTTCC+TGG 0.382519 7_1:-17756665 Msa1012580:CDS
AAACGAAATGGGAAGGGATT+CGG 0.382759 7_1:-17758562 Msa1012580:CDS
CTATGCTCCAAATGTCAAAT+CGG 0.384080 7_1:-17759618 Msa1012580:CDS
GCAGCAAGTTGTCTTCTTGA+TGG 0.386624 7_1:-17758275 Msa1012580:CDS
TCATCAAGTATCAAGATTCC+AGG 0.388586 7_1:+17757049 None:intergenic
AAGGTTGAGGAAATGCTTAA+TGG 0.392142 7_1:-17756999 Msa1012580:CDS
GTCTGCCATTTGGGAAGAAA+TGG 0.392168 7_1:-17758309 Msa1012580:CDS
GAAGAATTTGGATAGTCTTC+CGG 0.394022 7_1:-17758423 Msa1012580:CDS
AGTTACTTGAAGTTATTTCC+TGG 0.397468 7_1:-17757397 Msa1012580:CDS
TTGACAAACAGAAGTAATAA+AGG 0.397493 7_1:-17758497 Msa1012580:CDS
GCAGCATTTGCTTGAGGCGC+GGG 0.398158 7_1:-17756813 Msa1012580:CDS
CGAACGAGGCCATACAAGAT+AGG 0.400717 7_1:-17758806 Msa1012580:CDS
GTCATGTTCACAAATTTCAT+TGG 0.407210 7_1:+17758064 None:intergenic
CCTGCAAGGAGGCGAATTCA+TGG 0.412723 7_1:-17758605 Msa1012580:CDS
TATTTGAGAAATACTTTCAA+TGG 0.412834 7_1:-17756301 Msa1012580:CDS
ATCACAGTCAAGATTAGTCT+TGG 0.426980 7_1:-17759176 Msa1012580:CDS
TCACAGTCAAGATTAGTCTT+GGG 0.431530 7_1:-17759175 Msa1012580:CDS
GGATGGTAAGAGTGGTGAAA+AGG 0.434748 7_1:-17758768 Msa1012580:CDS
ATCTGATTTGATGGCATTGG+CGG 0.437082 7_1:+17758917 None:intergenic
GATCTAGATTTGTTTGAAAG+AGG 0.437409 7_1:-17756245 Msa1012580:CDS
GAAGAACCTATGTAACGTTT+GGG 0.437927 7_1:+17758857 None:intergenic
AGTTGATGATAATGTTACTT+TGG 0.438485 7_1:-17758657 Msa1012580:CDS
TCAATCTGATTTGATGGCAT+TGG 0.439902 7_1:+17758914 None:intergenic
TGTGAACTTCAAATCGGAAA+AGG 0.444435 7_1:-17759008 Msa1012580:CDS
GTTACTTGAAGTTATTTCCT+GGG 0.446436 7_1:-17757396 Msa1012580:CDS
CTCTCTGTGTTCGACGGCCA+TGG 0.448149 7_1:+17757281 None:intergenic
AAATAAGCTCCTATCTTGTA+TGG 0.448197 7_1:+17758797 None:intergenic
CATGTGTAAAGTGTGGATTT+TGG 0.450682 7_1:+17757352 None:intergenic
AGGTTCTTCTGTTGAGAAGT+TGG 0.452731 7_1:-17758843 Msa1012580:CDS
CCAAATCTGATCCTTCTAGA+AGG 0.453881 7_1:+17755775 None:intergenic
TGTTTGTCAAACAAATTGAA+TGG 0.453921 7_1:+17758510 None:intergenic
GTAAATTTCTACGAGGATCA+AGG 0.454603 7_1:-17759376 Msa1012580:CDS
TTGCATGAGGGATGGTTCCA+TGG 0.456415 7_1:+17757504 None:intergenic
AAATGTTGTGAACTTCAAAT+CGG 0.456729 7_1:-17759014 Msa1012580:CDS
TAGCCTCTTCAATTCATCTT+CGG 0.456753 7_1:+17756457 None:intergenic
GGACAGCAAGGCCTTCTAGA+AGG 0.458099 7_1:-17755786 Msa1012580:CDS
ATATCACATGCTCCTGGAGC+TGG 0.460717 7_1:-17757451 Msa1012580:CDS
GATAGGAGCTTATTTGATAG+AGG 0.460980 7_1:-17758789 Msa1012580:CDS
TGCAAGAGCCACAGTCTGTT+AGG 0.460999 7_1:-17755749 Msa1012580:CDS
TGCGAATATCAGATGACAAA+GGG 0.468200 7_1:+17759704 None:intergenic
TATGATTATGAAGAATGAAA+AGG 0.468297 7_1:-17755841 Msa1012580:CDS
CGCAGCATTTGCTTGAGGCG+CGG 0.471984 7_1:-17756814 Msa1012580:CDS
TATTATATTGAAGCCTTTGG+AGG 0.472756 7_1:+17759284 None:intergenic
GTGTATCAGTTATTGACGAC+CGG 0.474170 7_1:-17756029 Msa1012580:CDS
TATAAATGAAGAAACAAAGT+TGG 0.475973 7_1:-17758384 Msa1012580:CDS
AGATTGAAGATGAAATACTT+AGG 0.478427 7_1:-17755899 Msa1012580:CDS
TTTCCGATCTTTCTTGCATG+AGG 0.479980 7_1:+17757491 None:intergenic
ATGCCATCAAATCAGATTGA+AGG 0.481650 7_1:-17758911 Msa1012580:CDS
AAGAAGAATGGTGCTGCTGC+TGG 0.481843 7_1:-17758704 Msa1012580:CDS
AATAAAGAGGTTTATGCGAC+TGG 0.484157 7_1:-17759325 Msa1012580:CDS
TGGAACTTCCTACAGAATTG+AGG 0.485813 7_1:-17756979 Msa1012580:CDS
AGTATCCATTTCTTCCCAAA+TGG 0.486016 7_1:+17758304 None:intergenic
AAATATCTTTCAAAGAAGAA+TGG 0.486991 7_1:-17758716 Msa1012580:CDS
TCAATGGCAAAATGGAAAAG+AGG 0.487364 7_1:-17756285 Msa1012580:CDS
GATTGAAGATGAAATACTTA+GGG 0.488087 7_1:-17755898 Msa1012580:CDS
TTGAGTATCCATGAAATGTA+AGG 0.489930 7_1:+17759738 None:intergenic
ATTTGCTTGAGGCGCGGGCG+AGG 0.490931 7_1:-17756808 Msa1012580:CDS
TTTACATCACCAGAAGGTCT+TGG 0.492630 7_1:+17757220 None:intergenic
ATAAGTATCGAAGAACTACT+TGG 0.498443 7_1:-17755992 Msa1012580:CDS
TTCACAACATTTATAAGAGA+AGG 0.504109 7_1:+17759025 None:intergenic
CAAATGGCAGACAAGTCATC+AGG 0.504596 7_1:+17758320 None:intergenic
TATGCTCCAAATGTCAAATC+GGG 0.504825 7_1:-17759617 Msa1012580:CDS
AACCTATGTAACGTTTGGGT+TGG 0.506431 7_1:+17758861 None:intergenic
TCAATCAACGCTTGTGCTGA+AGG 0.506468 7_1:-17756167 Msa1012580:CDS
GTGAACTTCAAATCGGAAAA+GGG 0.506922 7_1:-17759007 Msa1012580:CDS
TACGAGGATCAAGGTTCCCT+TGG 0.507335 7_1:-17759367 Msa1012580:CDS
ACACCCAAGTGTTCTTGTCA+TGG 0.509409 7_1:-17757155 Msa1012580:CDS
AAGAAACGAAATGACGAGAA+AGG 0.509910 7_1:+17757423 None:intergenic
TCTGTTGAGAAGTTGGAAGT+TGG 0.511537 7_1:-17758836 Msa1012580:CDS
CACCCAAGTGTTCTTGTCAT+GGG 0.512599 7_1:-17757154 Msa1012580:CDS
ACCATGGATGTATCGATCCA+AGG 0.517448 7_1:+17756519 None:intergenic
ATCAAAAGCTCTACCTCGAG+AGG 0.518482 7_1:+17756545 None:intergenic
GTGCCTGTGTATCTTATCCA+TGG 0.520986 7_1:-17757298 Msa1012580:CDS
GGAGCTTATTTGATAGAGGA+TGG 0.523316 7_1:-17758785 Msa1012580:CDS
GTTATTGACGACCGGGTCGA+TGG 0.524989 7_1:-17756021 Msa1012580:CDS
TTACGGTAAGCATCATCAAA+TGG 0.529322 7_1:+17762087 None:intergenic
ATAATTGGCTCTTCTTCAGC+CGG 0.534892 7_1:+17758404 None:intergenic
AGATGAAATACTTAGGGAGA+TGG 0.537029 7_1:-17755892 Msa1012580:CDS
TAAGATTGTGTATCATGTCA+TGG 0.538779 7_1:-17759071 Msa1012580:CDS
CCAGAAGGTCTTGGAACTCC+AGG 0.539229 7_1:+17757229 None:intergenic
GATCTTTCTTGCATGAGGGA+TGG 0.540113 7_1:+17757496 None:intergenic
CTTCAATATAATAGTTGCGA+AGG 0.540115 7_1:-17759274 Msa1012580:CDS
AGTAAAATCCTCAATTCTGT+AGG 0.540703 7_1:+17756971 None:intergenic
AAGGAGGCGAATTCATGGTT+CGG 0.541286 7_1:-17758600 Msa1012580:CDS
CACAGTCAAGATTAGTCTTG+GGG 0.541514 7_1:-17759174 Msa1012580:CDS
ATCCTAGAAGCACTAAATCA+AGG 0.543534 7_1:-17757018 Msa1012580:CDS
TATAATCTCAAGCTGTTCAT+CGG 0.543979 7_1:+17756610 None:intergenic
TTGATAGAGGATGGTAAGAG+TGG 0.544017 7_1:-17758776 Msa1012580:CDS
GAAAGCGCAGCATTTGCTTG+AGG 0.546756 7_1:-17756819 Msa1012580:CDS
TTCCGATCTTTCTTGCATGA+GGG 0.548848 7_1:+17757492 None:intergenic
ATCCCTCATGCAAGAAAGAT+CGG 0.551602 7_1:-17757494 Msa1012580:CDS
TGTGTCATATCACATGCTCC+TGG 0.551693 7_1:-17757457 Msa1012580:CDS
GGAATCTTGATACTTGATGA+AGG 0.552776 7_1:-17757046 Msa1012580:CDS
TCTGCAAAGAGAAGCCTGCA+AGG 0.554610 7_1:-17758619 Msa1012580:CDS
GGAAGAAATGGATACTGCTA+TGG 0.554695 7_1:-17758297 Msa1012580:CDS
AAATGAAGAAACAAAGTTGG+AGG 0.554893 7_1:-17758381 Msa1012580:CDS
ATCACGAGGCATATTCGTTA+CGG 0.555592 7_1:+17755815 None:intergenic
ATCGAATATTTATCCTCCAA+AGG 0.556747 7_1:-17759297 Msa1012580:CDS
CCATGGATGTATCGATCCAA+GGG 0.557758 7_1:+17756520 None:intergenic
CTCCAAATGTCAAATCGGGT+TGG 0.559335 7_1:-17759613 Msa1012580:CDS
AGTTAGATTCTAAATACTTG+AGG 0.561826 7_1:-17756859 Msa1012580:CDS
AAATAGTGATAGTTCTGAAG+TGG 0.562045 7_1:-17759242 Msa1012580:CDS
GTTAAATGTTGATGCACAGA+AGG 0.562995 7_1:-17758465 Msa1012580:CDS
AAGAACTACTTGGAAAGAGT+GGG 0.567137 7_1:-17755982 Msa1012580:CDS
TAGCCCATGACAAGAACACT+TGG 0.567881 7_1:+17757151 None:intergenic
TGGATAAGATACACAGGCAC+GGG 0.569069 7_1:+17757301 None:intergenic
GGTAAGAGTGGTGAAAAGGT+AGG 0.572115 7_1:-17758764 Msa1012580:CDS
TTGCCGAAGATGAATTGAAG+AGG 0.577257 7_1:-17756460 Msa1012580:CDS
CATCAAGTATCAAGATTCCA+GGG 0.577717 7_1:+17757050 None:intergenic
GAAGAACTACTTGGAAAGAG+TGG 0.579673 7_1:-17755983 Msa1012580:CDS
CCCTTGGATCGATACATCCA+TGG 0.580673 7_1:-17756520 Msa1012580:CDS
ACTTAGGGAGATGGTTGAAG+AGG 0.582988 7_1:-17755883 Msa1012580:CDS
GTCCAACCCAAACGTTACAT+AGG 0.585169 7_1:-17758863 Msa1012580:CDS
TTGTCTTCTTGATGGAACTG+AGG 0.585263 7_1:-17758267 Msa1012580:intron
AAGCAATAAGGAATGACTCA+TGG 0.585302 7_1:-17759801 Msa1012580:CDS
GTTGCAGGGTTCAAATGTAG+AGG 0.586141 7_1:-17758099 Msa1012580:intron
AGTGTCGAAAAGCGATGATG+AGG 0.586488 7_1:-17758351 Msa1012580:CDS
GAAGCACTAAATCAAGGTTG+AGG 0.587727 7_1:-17757012 Msa1012580:CDS
GGAATATTCTGTACTAGCTG+TGG 0.590871 7_1:-17758020 Msa1012580:CDS
ATTGACGACCGGGTCGATGG+AGG 0.593637 7_1:-17756018 Msa1012580:CDS
GATGAATTGAAGAGGCTAGA+CGG 0.597436 7_1:-17756452 Msa1012580:CDS
GAAAAGGTAGGCGATGCTGC+TGG 0.601604 7_1:-17758752 Msa1012580:CDS
AGTGTATATATTTGTAAACC+AGG 0.603594 7_1:+17756647 None:intergenic
ATGTTGTAACGAACCACGAA+AGG 0.610210 7_1:+17759137 None:intergenic
CTTATCTTCCTCCATCGACC+CGG 0.610407 7_1:+17756010 None:intergenic
AGTGGTTAAGCCTTATAGGT+GGG 0.611188 7_1:-17759224 Msa1012580:CDS
ATTTGCACACAGAAAGTACA+TGG 0.612438 7_1:-17757092 Msa1012580:CDS
GGAACTCCAGGAAGAACCGT+AGG 0.613738 7_1:+17757241 None:intergenic
AAGTGGTTAAGCCTTATAGG+TGG 0.618090 7_1:-17759225 Msa1012580:CDS
AAAACTTTGAGAGAAAGCCC+TGG 0.619123 7_1:-17757067 Msa1012580:CDS
TTGAATCTCTCTGTGTTCGA+CGG 0.624793 7_1:+17757275 None:intergenic
ATGCGAATATCAGATGACAA+AGG 0.625364 7_1:+17759703 None:intergenic
CAAAATCCACACTTTACACA+TGG 0.625539 7_1:-17757351 Msa1012580:CDS
GATTCTAAATACTTGAGGAG+AGG 0.628538 7_1:-17756854 Msa1012580:CDS
ATATCAAATAGAGAAACTAC+AGG 0.628876 7_1:+17758974 None:intergenic
TAAACCAGGAAGTGTATCAG+AGG 0.630562 7_1:+17756661 None:intergenic
TGTATCAGTTATTGACGACC+GGG 0.631867 7_1:-17756028 Msa1012580:CDS
TCGAACACAGAGAGATTCAA+CGG 0.634741 7_1:-17757272 Msa1012580:CDS
GAATGACTCATGGCAACCTG+TGG 0.635530 7_1:-17759791 Msa1012580:CDS
TGCTGTCCTTCTGTATCACG+AGG 0.637077 7_1:+17755801 None:intergenic
CAAGAAAGATCGGAAACAAG+TGG 0.645212 7_1:-17757484 Msa1012580:CDS
TTCAACGGCTCCAAAACCTA+CGG 0.645818 7_1:-17757257 Msa1012580:CDS
AAAGAGGAGAAACAATACAG+TGG 0.648975 7_1:-17757730 Msa1012580:CDS
ATGGATAAGATACACAGGCA+CGG 0.650745 7_1:+17757300 None:intergenic
ACAAACAGAAGTAATAAAGG+TGG 0.652555 7_1:-17758494 Msa1012580:CDS
TCAAAAGCTCTACCTCGAGA+GGG 0.652702 7_1:+17756546 None:intergenic
GAGCATTGATCAGCTTCGTG+AGG 0.658839 7_1:+17759412 None:intergenic
CGGCCATGGATAAGATACAC+AGG 0.663444 7_1:+17757295 None:intergenic
CGTGATACAGAAGGACAGCA+AGG 0.667482 7_1:-17755798 Msa1012580:CDS
TACCACCAGTTACCCTCTCG+AGG 0.667880 7_1:-17756558 Msa1012580:CDS
GAAAGATCGGAAACAAGTGG+TGG 0.673137 7_1:-17757481 Msa1012580:CDS
GCGAATATCAGATGACAAAG+GGG 0.675109 7_1:+17759705 None:intergenic
TTTGCACCATGTGTAAAGTG+TGG 0.681578 7_1:+17757345 None:intergenic
AGCCCATGACAAGAACACTT+GGG 0.690203 7_1:+17757152 None:intergenic
AATCAACTCAGATAACGATG+AGG 0.714220 7_1:-17756756 Msa1012580:CDS
AATATGCCTCGTGATACAGA+AGG 0.715485 7_1:-17755807 Msa1012580:CDS
AAGTTTGAAGATCCTCGCAG+CGG 0.715513 7_1:-17756209 Msa1012580:CDS
GCCTAAGACGATCAAAACGT+AGG 0.727623 7_1:-17758889 Msa1012580:CDS
GCAAAGAGAAGCCTGCAAGG+AGG 0.740126 7_1:-17758616 Msa1012580:CDS
TACCTCGAGAGGGTAACTGG+TGG 0.749946 7_1:+17756556 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATTTAAAATAATTTAT+CGG + chr7_1:17760089-17760108 None:intergenic 0.0%
!!! AGTTGTTTTTTTATTAAAAT+TGG + chr7_1:17756447-17756466 None:intergenic 10.0%
!! AAAACAAATCATATATATAT+AGG + chr7_1:17759644-17759663 None:intergenic 10.0%
!!! TATATATATATGATTTGTTT+TGG - chr7_1:17759643-17759662 Msa1012580:CDS 10.0%
!!! TTTAAATTTAGTTTCTTATT+TGG - chr7_1:17759944-17759963 Msa1012580:intron 10.0%
!! ATTTATTAATACATTGATCA+TGG + chr7_1:17755933-17755952 None:intergenic 15.0%
!! AATTCTATTGTAAATCTTAT+TGG + chr7_1:17756217-17756236 None:intergenic 15.0%
!! TACAATTATCAAAATTAAAG+AGG - chr7_1:17756514-17756533 Msa1012580:CDS 15.0%
!! TATAAAAACACTTAATAAAG+AGG - chr7_1:17758528-17758547 Msa1012580:CDS 15.0%
!!! TTTGTTTCTTCATTTATAAT+TGG + chr7_1:17759480-17759499 None:intergenic 15.0%
!! TTAAATGTATATTCTTGTTA+AGG + chr7_1:17759929-17759948 None:intergenic 15.0%
!!! TTTAAAATAATTTATCGGTT+AGG + chr7_1:17760084-17760103 None:intergenic 15.0%
!!! ATTTTAAATATAATGATAGG+TGG - chr7_1:17760096-17760115 Msa1012580:intron 15.0%
!!! ATCAAATTTGATTTAAGAAA+AGG - chr7_1:17761438-17761457 Msa1012580:intron 15.0%
!! AACATATGAAAAACTACAAA+TGG - chr7_1:17755857-17755876 Msa1012580:CDS 20.0%
!!! AGCATGTTATATTTTCTTAT+AGG + chr7_1:17756324-17756343 None:intergenic 20.0%
!! TATCAAAATTAAAGAGGATA+AGG - chr7_1:17756520-17756539 Msa1012580:CDS 20.0%
!! ATCAAAATTAAAGAGGATAA+GGG - chr7_1:17756521-17756540 Msa1012580:CDS 20.0%
!! AAAAGTGAGTATATATAGAA+TGG - chr7_1:17757034-17757053 Msa1012580:CDS 20.0%
!! ATCGAATGTTTACATAATTT+AGG + chr7_1:17757757-17757776 None:intergenic 20.0%
!! AAAAATAACACAAATGTTGA+GGG + chr7_1:17757823-17757842 None:intergenic 20.0%
!!! CTTTAATATATTTTTTGGGA+TGG - chr7_1:17757856-17757875 Msa1012580:intron 20.0%
!! ATTTAAGAGATTAAACTTAC+TGG + chr7_1:17758286-17758305 None:intergenic 20.0%
!!! TGTTTTTATATTTCTACCAA+GGG + chr7_1:17758518-17758537 None:intergenic 20.0%
!!! CAATCTTATTTTGAATAGAT+CGG + chr7_1:17758783-17758802 None:intergenic 20.0%
!!! TTCTTTGAAAGATATTTTGA+AGG + chr7_1:17759147-17759166 None:intergenic 20.0%
!! AAATATCTTTCAAAGAAGAA+TGG - chr7_1:17759150-17759169 Msa1012580:CDS 20.0%
!! TATAAATGAAGAAACAAAGT+TGG - chr7_1:17759482-17759501 Msa1012580:intron 20.0%
!!! CTACTGTAATTTTTAAATAG+AGG - chr7_1:17759980-17759999 Msa1012580:intron 20.0%
!! TATTTGAGAAATACTTTCAA+TGG - chr7_1:17761565-17761584 Msa1012580:intron 20.0%
!! TATGATTATGAAGAATGAAA+AGG - chr7_1:17762025-17762044 Msa1012580:intron 20.0%
! AAACTACAAATGGATATTAC+AGG - chr7_1:17755867-17755886 Msa1012580:CDS 25.0%
! TAAATATGACATAGAGACTT+TGG - chr7_1:17755948-17755967 Msa1012580:CDS 25.0%
! ATTTGATTGCACCATAAATT+TGG - chr7_1:17756013-17756032 Msa1012580:CDS 25.0%
! ATCCTTTATAGCCAAATTTA+TGG + chr7_1:17756027-17756046 None:intergenic 25.0%
! ATAGCGGTTTGAAAAATTTA+CGG - chr7_1:17756101-17756120 Msa1012580:CDS 25.0%
! TGTATATGCAATTGATGAAT+TGG - chr7_1:17756361-17756380 Msa1012580:CDS 25.0%
!! TAGGTTTTCACTATTTTACT+TGG + chr7_1:17756409-17756428 None:intergenic 25.0%
! AATAGTGAAAACCTAATTCA+AGG - chr7_1:17756414-17756433 Msa1012580:CDS 25.0%
! AAAACCTAATTCAAGGAATT+AGG - chr7_1:17756421-17756440 Msa1012580:CDS 25.0%
! TTCAACATTGTTACTATTAG+TGG + chr7_1:17756648-17756667 None:intergenic 25.0%
! TAATTGTTCTTGTGTTCAAA+GGG + chr7_1:17756858-17756877 None:intergenic 25.0%
!! TTCTTTCAAGTAAATTGGTT+GGG + chr7_1:17756948-17756967 None:intergenic 25.0%
!! AAGTTTTCATGATTAGATTG+AGG - chr7_1:17757259-17757278 Msa1012580:CDS 25.0%
! TTAAAGCTAAACATTATGCT+AGG - chr7_1:17757503-17757522 Msa1012580:CDS 25.0%
!!! TTGATGATGATGTTTTAATG+TGG + chr7_1:17757538-17757557 None:intergenic 25.0%
!!! AGCTTATCTTTTTTTGTCAA+AGG + chr7_1:17757566-17757585 None:intergenic 25.0%
! AAAATAACACAAATGTTGAG+GGG + chr7_1:17757822-17757841 None:intergenic 25.0%
! GAAAAATAACACAAATGTTG+AGG + chr7_1:17757824-17757843 None:intergenic 25.0%
! TGTTGATATCTCAATTATGT+TGG + chr7_1:17757910-17757929 None:intergenic 25.0%
!! ATTTAGCTTAACATATATCG+TGG + chr7_1:17757967-17757986 None:intergenic 25.0%
! GAGCTTATAAAAATTGAGTT+TGG - chr7_1:17758097-17758116 Msa1012580:intron 25.0%
! AAAAACAACCTTACATTTCA+TGG - chr7_1:17758120-17758139 Msa1012580:intron 25.0%
!! GTTTTATGTAAATTTCTACG+AGG - chr7_1:17758483-17758502 Msa1012580:CDS 25.0%
!!! GTGTTTTTATATTTCTACCA+AGG + chr7_1:17758519-17758538 None:intergenic 25.0%
! AACTATTATATTGAAGCCTT+TGG + chr7_1:17758588-17758607 None:intergenic 25.0%
!!! TACAACATCCTTTTTAAAGA+AGG - chr7_1:17758744-17758763 Msa1012580:CDS 25.0%
!! GAATGAAACCTTCTTTAAAA+AGG + chr7_1:17758755-17758774 None:intergenic 25.0%
! TTCACAACATTTATAAGAGA+AGG + chr7_1:17758844-17758863 None:intergenic 25.0%
! AAATGTTGTGAACTTCAAAT+CGG - chr7_1:17758852-17758871 Msa1012580:CDS 25.0%
! ATATCAAATAGAGAAACTAC+AGG + chr7_1:17758895-17758914 None:intergenic 25.0%
!! GATATGTTTTGTGATTATGA+TGG - chr7_1:17758910-17758929 Msa1012580:CDS 25.0%
! TGTTACAATATCAAGTGATT+TGG - chr7_1:17759185-17759204 Msa1012580:CDS 25.0%
!!! AGTTGATGATAATGTTACTT+TGG - chr7_1:17759209-17759228 Msa1012580:CDS 25.0%
!!! GTTGATGATAATGTTACTTT+GGG - chr7_1:17759210-17759229 Msa1012580:CDS 25.0%
!!! ATATGGATTTTGAAACGAAA+TGG - chr7_1:17759292-17759311 Msa1012580:CDS 25.0%
!!! TATGGATTTTGAAACGAAAT+GGG - chr7_1:17759293-17759312 Msa1012580:CDS 25.0%
! TGTTTGTCAAACAAATTGAA+TGG + chr7_1:17759359-17759378 None:intergenic 25.0%
! TTGACAAACAGAAGTAATAA+AGG - chr7_1:17759369-17759388 Msa1012580:CDS 25.0%
!!! GTTTAATTTTATTACGCTGT+CGG - chr7_1:17759667-17759686 Msa1012580:CDS 25.0%
!! TATGATAGGTTGTAATTTGT+TGG + chr7_1:17759712-17759731 None:intergenic 25.0%
! TATACGTTCAATGAAGAAAT+TGG - chr7_1:17759825-17759844 Msa1012580:intron 25.0%
!! TTGTACGAAATAACTTTTCA+CGG + chr7_1:17760043-17760062 None:intergenic 25.0%
! TAATGATGAACAAAAATCAG+AGG - chr7_1:17760165-17760184 Msa1012580:intron 25.0%
!!! AAAAAGCTTTTGAGTTTCTT+TGG - chr7_1:17760323-17760342 Msa1012580:intron 25.0%
! GTCTTGGAAAAATAAAAAAG+TGG - chr7_1:17760683-17760702 Msa1012580:intron 25.0%
!! TTTTGTATCTTGTCTCATTA+AGG + chr7_1:17760755-17760774 None:intergenic 25.0%
! AGTTAGATTCTAAATACTTG+AGG - chr7_1:17761007-17761026 Msa1012580:intron 25.0%
! AGTGTATATATTTGTAAACC+AGG + chr7_1:17761222-17761241 None:intergenic 25.0%
! AAATACTTTCAATGGCAAAA+TGG - chr7_1:17761573-17761592 Msa1012580:intron 25.0%
!!! TGATATTTTTGGATTCTGAA+TGG - chr7_1:17761748-17761767 Msa1012580:intron 25.0%
! AGATTGAAGATGAAATACTT+AGG - chr7_1:17761967-17761986 Msa1012580:intron 25.0%
! GATTGAAGATGAAATACTTA+GGG - chr7_1:17761968-17761987 Msa1012580:intron 25.0%
CAAAGAAGATAGAAGACTTA+CGG + chr7_1:17755799-17755818 None:intergenic 30.0%
CACCATAAATTTGGCTATAA+AGG - chr7_1:17756022-17756041 Msa1012580:CDS 30.0%
GCTATAAAGGATCTATTTGT+TGG - chr7_1:17756035-17756054 Msa1012580:CDS 30.0%
! GATCTATTTGTTGGTCTATA+TGG - chr7_1:17756044-17756063 Msa1012580:CDS 30.0%
ATGCAATTGATGAATTGGTT+AGG - chr7_1:17756366-17756385 Msa1012580:CDS 30.0%
GTGAACTACTACAAAAATCT+CGG + chr7_1:17756561-17756580 None:intergenic 30.0%
GAAGAACTATGATAGTTTCA+AGG + chr7_1:17756693-17756712 None:intergenic 30.0%
!! TCAAAGGGTATTTGAAGTTT+GGG + chr7_1:17756739-17756758 None:intergenic 30.0%
!! TTCAAAGGGTATTTGAAGTT+TGG + chr7_1:17756740-17756759 None:intergenic 30.0%
CTTCAAATACCCTTTGAATT+TGG - chr7_1:17756742-17756761 Msa1012580:CDS 30.0%
CTAATTGTTCTTGTGTTCAA+AGG + chr7_1:17756859-17756878 None:intergenic 30.0%
! GTTCTTTCAAGTAAATTGGT+TGG + chr7_1:17756949-17756968 None:intergenic 30.0%
! GTTGGTTCTTTCAAGTAAAT+TGG + chr7_1:17756953-17756972 None:intergenic 30.0%
!! TTGAGTCATATGATTTGGTA+GGG + chr7_1:17756994-17757013 None:intergenic 30.0%
!! TTTGAGTCATATGATTTGGT+AGG + chr7_1:17756995-17757014 None:intergenic 30.0%
!!! TCGATTCACTATGTTGTTTT+TGG + chr7_1:17757082-17757101 None:intergenic 30.0%
! AGCTACATGAACTATGATTT+TGG + chr7_1:17757703-17757722 None:intergenic 30.0%
!! ACATTTGTTTGTTTTCCTTG+CGG - chr7_1:17757784-17757803 Msa1012580:intron 30.0%
!! AGAATATCGTTGTTTTGTTG+AGG - chr7_1:17757882-17757901 Msa1012580:intron 30.0%
! AAACAGCATTTGAAGCAATA+AGG - chr7_1:17758053-17758072 Msa1012580:CDS 30.0%
! TCAATTTTTATAAGCTCCAC+AGG + chr7_1:17758094-17758113 None:intergenic 30.0%
TTGAGTATCCATGAAATGTA+AGG + chr7_1:17758131-17758150 None:intergenic 30.0%
GAGATTAAACTTACTGGAAT+AGG + chr7_1:17758280-17758299 None:intergenic 30.0%
ATCGAATATTTATCCTCCAA+AGG - chr7_1:17758569-17758588 Msa1012580:CDS 30.0%
TATTATATTGAAGCCTTTGG+AGG + chr7_1:17758585-17758604 None:intergenic 30.0%
CTTCAATATAATAGTTGCGA+AGG - chr7_1:17758592-17758611 Msa1012580:CDS 30.0%
!! AAATAGTGATAGTTCTGAAG+TGG - chr7_1:17758624-17758643 Msa1012580:CDS 30.0%
TAAGATTGTGTATCATGTCA+TGG - chr7_1:17758795-17758814 Msa1012580:CDS 30.0%
AAATAAGCTCCTATCTTGTA+TGG + chr7_1:17759072-17759091 None:intergenic 30.0%
!!! ATTTTGAAACGAAATGGGAA+GGG - chr7_1:17759298-17759317 Msa1012580:CDS 30.0%
ACAAACAGAAGTAATAAAGG+TGG - chr7_1:17759372-17759391 Msa1012580:CDS 30.0%
TGACACTTACATGAAGAATT+TGG - chr7_1:17759431-17759450 Msa1012580:CDS 30.0%
AAATGAAGAAACAAAGTTGG+AGG - chr7_1:17759485-17759504 Msa1012580:intron 30.0%
TATATGAATTATACCGTTGC+AGG - chr7_1:17759752-17759771 Msa1012580:CDS 30.0%
ATATGAATTATACCGTTGCA+GGG - chr7_1:17759753-17759772 Msa1012580:CDS 30.0%
GTCATGTTCACAAATTTCAT+TGG + chr7_1:17759805-17759824 None:intergenic 30.0%
CGTACAAAATGTTACACAAT+AGG - chr7_1:17760056-17760075 Msa1012580:intron 30.0%
TGCAGAAAAAGACAATGTTT+GGG - chr7_1:17760258-17760277 Msa1012580:intron 30.0%
! TTTCTTTGGAAAAACATTGC+TGG - chr7_1:17760337-17760356 Msa1012580:intron 30.0%
! AGTTACTTGAAGTTATTTCC+TGG - chr7_1:17760469-17760488 Msa1012580:intron 30.0%
! GTTACTTGAAGTTATTTCCT+GGG - chr7_1:17760470-17760489 Msa1012580:intron 30.0%
!! TGGTGATGTAAAACATGTTT+TGG - chr7_1:17760657-17760676 Msa1012580:intron 30.0%
!! AAACATGTTTTGGATTGTCT+TGG - chr7_1:17760667-17760686 Msa1012580:intron 30.0%
AGTAAAATCCTCAATTCTGT+AGG + chr7_1:17760898-17760917 None:intergenic 30.0%
! GAATTGAGGATTTTACTTTC+TGG - chr7_1:17760901-17760920 Msa1012580:intron 30.0%
TTCATCAACGTTTATGAAAG+TGG - chr7_1:17761177-17761196 Msa1012580:intron 30.0%
TATAATCTCAAGCTGTTCAT+CGG + chr7_1:17761259-17761278 None:intergenic 30.0%
!! GCTCAGAACAAATCTTATTT+TGG + chr7_1:17761466-17761485 None:intergenic 30.0%
ACGTGTAGTGAAAAATGAAA+AGG - chr7_1:17761494-17761513 Msa1012580:intron 30.0%
AACTCTATGAAAAATCTCAG+AGG + chr7_1:17761546-17761565 None:intergenic 30.0%
! GATCTAGATTTGTTTGAAAG+AGG - chr7_1:17761621-17761640 Msa1012580:intron 30.0%
!!! TGCTTCTAGAGTGATATTTT+TGG - chr7_1:17761737-17761756 Msa1012580:intron 30.0%
!!! ATAGCTTGCTTTGTTTTTGA+AGG + chr7_1:17761777-17761796 None:intergenic 30.0%
!! ATAAGTATCGAAGAACTACT+TGG - chr7_1:17761874-17761893 Msa1012580:intron 30.0%
!!! TTCTTGCATGATTTTTAGTG+AGG - chr7_1:17761908-17761927 Msa1012580:intron 30.0%
! TTGCAAATGCCTTTTTCTAG+GGG + chr7_1:17755750-17755769 None:intergenic 35.0%
! GTTGCAAATGCCTTTTTCTA+GGG + chr7_1:17755751-17755770 None:intergenic 35.0%
! TGTTGCAAATGCCTTTTTCT+AGG + chr7_1:17755752-17755771 None:intergenic 35.0%
TTACGGTAAGCATCATCAAA+TGG + chr7_1:17755782-17755801 None:intergenic 35.0%
TCCTCATGCATAATAGACTA+GGG + chr7_1:17755822-17755841 None:intergenic 35.0%
TTCCTCATGCATAATAGACT+AGG + chr7_1:17755823-17755842 None:intergenic 35.0%
TTGGCCTAATTCCTTGAATT+AGG + chr7_1:17756428-17756447 None:intergenic 35.0%
TTACTATTAGTGGAAGTCCT+TGG + chr7_1:17756638-17756657 None:intergenic 35.0%
!! CAAAGGGTATTTGAAGTTTG+GGG + chr7_1:17756738-17756757 None:intergenic 35.0%
!! CAAGAAGCACCAAATTCAAA+GGG + chr7_1:17756754-17756773 None:intergenic 35.0%
!! TCAAGAAGCACCAAATTCAA+AGG + chr7_1:17756755-17756774 None:intergenic 35.0%
AAATTGGTTGGGCTTAATCA+AGG + chr7_1:17756937-17756956 None:intergenic 35.0%
GCACTTTGAGTCATATGATT+TGG + chr7_1:17756999-17757018 None:intergenic 35.0%
! TGAATCGATTCAAAATGTCC+AGG - chr7_1:17757184-17757203 Msa1012580:CDS 35.0%
AATCGTTTGAATCTTCATCC+TGG + chr7_1:17757205-17757224 None:intergenic 35.0%
TACTTAACCCACAAGATATC+AGG - chr7_1:17757422-17757441 Msa1012580:CDS 35.0%
TGTTGTTCCTGATATCTTGT+GGG + chr7_1:17757432-17757451 None:intergenic 35.0%
! TTGTTGTTCCTGATATCTTG+TGG + chr7_1:17757433-17757452 None:intergenic 35.0%
AGGAACAACAAGAAATCACA+CGG - chr7_1:17757442-17757461 Msa1012580:CDS 35.0%
GCTAAAGACACATATTGCTA+AGG - chr7_1:17757466-17757485 Msa1012580:CDS 35.0%
!! CATTTGTTTGTTTTCCTTGC+GGG - chr7_1:17757785-17757804 Msa1012580:intron 35.0%
TGAGTTTAACAGTATCACGA+TGG + chr7_1:17757999-17758018 None:intergenic 35.0%
AAGCAATAAGGAATGACTCA+TGG - chr7_1:17758065-17758084 Msa1012580:CDS 35.0%
TGCGAATATCAGATGACAAA+GGG + chr7_1:17758165-17758184 None:intergenic 35.0%
ATGCGAATATCAGATGACAA+AGG + chr7_1:17758166-17758185 None:intergenic 35.0%
CTATGCTCCAAATGTCAAAT+CGG - chr7_1:17758248-17758267 Msa1012580:intron 35.0%
TATGCTCCAAATGTCAAATC+GGG - chr7_1:17758249-17758268 Msa1012580:intron 35.0%
GTAAATTTCTACGAGGATCA+AGG - chr7_1:17758490-17758509 Msa1012580:CDS 35.0%
AATAAAGAGGTTTATGCGAC+TGG - chr7_1:17758541-17758560 Msa1012580:CDS 35.0%
!! ATCACAGTCAAGATTAGTCT+TGG - chr7_1:17758690-17758709 Msa1012580:CDS 35.0%
!! TCACAGTCAAGATTAGTCTT+GGG - chr7_1:17758691-17758710 Msa1012580:CDS 35.0%
! GATTTTTATCTGACCTTTCG+TGG - chr7_1:17758716-17758735 Msa1012580:CDS 35.0%
TGTGAACTTCAAATCGGAAA+AGG - chr7_1:17758858-17758877 Msa1012580:CDS 35.0%
GTGAACTTCAAATCGGAAAA+GGG - chr7_1:17758859-17758878 Msa1012580:CDS 35.0%
! TCAATCTGATTTGATGGCAT+TGG + chr7_1:17758955-17758974 None:intergenic 35.0%
ATGCCATCAAATCAGATTGA+AGG - chr7_1:17758955-17758974 Msa1012580:CDS 35.0%
GAAGAACCTATGTAACGTTT+GGG + chr7_1:17759012-17759031 None:intergenic 35.0%
AGAAGAACCTATGTAACGTT+TGG + chr7_1:17759013-17759032 None:intergenic 35.0%
GATAGGAGCTTATTTGATAG+AGG - chr7_1:17759077-17759096 Msa1012580:CDS 35.0%
! AATTCATGGTTCGGATGATA+TGG - chr7_1:17759275-17759294 Msa1012580:CDS 35.0%
!!! GATTTTGAAACGAAATGGGA+AGG - chr7_1:17759297-17759316 Msa1012580:CDS 35.0%
GTTAAATGTTGATGCACAGA+AGG - chr7_1:17759401-17759420 Msa1012580:CDS 35.0%
GAAGAATTTGGATAGTCTTC+CGG - chr7_1:17759443-17759462 Msa1012580:CDS 35.0%
AGTATCCATTTCTTCCCAAA+TGG + chr7_1:17759565-17759584 None:intergenic 35.0%
GATAGGTGGAAAGACAAAAA+TGG - chr7_1:17760110-17760129 Msa1012580:intron 35.0%
AAGACAAAAATGGCAGAAAG+AGG - chr7_1:17760120-17760139 Msa1012580:intron 35.0%
AAAGAGGAGAAACAATACAG+TGG - chr7_1:17760136-17760155 Msa1012580:intron 35.0%
! TTGTCTTTTTCTGCAGGTAT+TGG + chr7_1:17760253-17760272 None:intergenic 35.0%
! CAAACATTGTCTTTTTCTGC+AGG + chr7_1:17760259-17760278 None:intergenic 35.0%
CTGCAGAAAAAGACAATGTT+TGG - chr7_1:17760257-17760276 Msa1012580:intron 35.0%
!! TGCATCTTTTCTTTGAGTTC+TGG + chr7_1:17760292-17760311 None:intergenic 35.0%
! GAAACTCAAAAGCTTTTTGC+TGG + chr7_1:17760321-17760340 None:intergenic 35.0%
AAGAAACGAAATGACGAGAA+AGG + chr7_1:17760446-17760465 None:intergenic 35.0%
! CATGTGTAAAGTGTGGATTT+TGG + chr7_1:17760517-17760536 None:intergenic 35.0%
CAAAATCCACACTTTACACA+TGG - chr7_1:17760515-17760534 Msa1012580:intron 35.0%
GGTGCAAAGAGTTCAAAAAA+TGG - chr7_1:17760536-17760555 Msa1012580:intron 35.0%
! ACATGTTTTACATCACCAGA+AGG + chr7_1:17760655-17760674 None:intergenic 35.0%
! ATTTGCACACAGAAAGTACA+TGG - chr7_1:17760774-17760793 Msa1012580:intron 35.0%
CATCAAGTATCAAGATTCCA+GGG + chr7_1:17760819-17760838 None:intergenic 35.0%
TCATCAAGTATCAAGATTCC+AGG + chr7_1:17760820-17760839 None:intergenic 35.0%
GGAATCTTGATACTTGATGA+AGG - chr7_1:17760820-17760839 Msa1012580:intron 35.0%
!! ATCCTAGAAGCACTAAATCA+AGG - chr7_1:17760848-17760867 Msa1012580:intron 35.0%
AACCTTGATTTAGTGCTTCT+AGG + chr7_1:17760853-17760872 None:intergenic 35.0%
AAGGTTGAGGAAATGCTTAA+TGG - chr7_1:17760867-17760886 Msa1012580:intron 35.0%
! AGCACTTCGTGAACAAATTT+TGG + chr7_1:17760982-17761001 None:intergenic 35.0%
GATTCTAAATACTTGAGGAG+AGG - chr7_1:17761012-17761031 Msa1012580:intron 35.0%
AATCAACTCAGATAACGATG+AGG - chr7_1:17761110-17761129 Msa1012580:intron 35.0%
TAACGATGAGGAAAAAATGC+AGG - chr7_1:17761122-17761141 Msa1012580:intron 35.0%
AACGATGAGGAAAAAATGCA+GGG - chr7_1:17761123-17761142 Msa1012580:intron 35.0%
ACAGAAACTGCAGAAGAAAA+TGG - chr7_1:17761278-17761297 Msa1012580:intron 35.0%
GCAAAAAACTTATCTGCACA+TGG + chr7_1:17761390-17761409 None:intergenic 35.0%
TAGCCTCTTCAATTCATCTT+CGG + chr7_1:17761412-17761431 None:intergenic 35.0%
! TTTTCACTACACGTGAGATT+AGG + chr7_1:17761488-17761507 None:intergenic 35.0%
TCAATGGCAAAATGGAAAAG+AGG - chr7_1:17761581-17761600 Msa1012580:intron 35.0%
!!! TAAACCATTTTTTGCTGACC+AGG + chr7_1:17761816-17761835 None:intergenic 35.0%
AAGAACTACTTGGAAAGAGT+GGG - chr7_1:17761884-17761903 Msa1012580:intron 35.0%
!!! GATTTTTAGTGAGGAGTTTG+TGG - chr7_1:17761917-17761936 Msa1012580:intron 35.0%
TTGTGGAAGATCCTTCTAAA+TGG - chr7_1:17761934-17761953 Msa1012580:intron 35.0%
!! TTTTCTGCTTGCCATTTAGA+AGG + chr7_1:17761948-17761967 None:intergenic 35.0%
AGATGAAATACTTAGGGAGA+TGG - chr7_1:17761974-17761993 Msa1012580:intron 35.0%
AATAAAGATGCACGCTAGGA+GGG - chr7_1:17756069-17756088 Msa1012580:CDS 40.0%
TTGATGCTACGTTTGCCAAA+TGG - chr7_1:17756830-17756849 Msa1012580:CDS 40.0%
TGTGTTCAAAGGGATCCATT+TGG + chr7_1:17756848-17756867 None:intergenic 40.0%
TAATCTCATTCCACCTCCAA+AGG + chr7_1:17756897-17756916 None:intergenic 40.0%
TGCTAATAGGGATTGTAGGT+TGG + chr7_1:17756971-17756990 None:intergenic 40.0%
! GATTTGGTAGGGTGCTAATA+GGG + chr7_1:17756983-17757002 None:intergenic 40.0%
!! TGATTTGGTAGGGTGCTAAT+AGG + chr7_1:17756984-17757003 None:intergenic 40.0%
! CGTTTTCTGCACTTCTGAAT+CGG + chr7_1:17757384-17757403 None:intergenic 40.0%
GCGAATATCAGATGACAAAG+GGG + chr7_1:17758164-17758183 None:intergenic 40.0%
! TGCTCTAACTTTTTACGACG+CGG - chr7_1:17758214-17758233 Msa1012580:intron 40.0%
! CTGAAGTGGTTAAGCCTTAT+AGG - chr7_1:17758638-17758657 Msa1012580:CDS 40.0%
! AAGTGGTTAAGCCTTATAGG+TGG - chr7_1:17758641-17758660 Msa1012580:CDS 40.0%
! AGTGGTTAAGCCTTATAGGT+GGG - chr7_1:17758642-17758661 Msa1012580:CDS 40.0%
TCAGATGAATCCCACCTATA+AGG + chr7_1:17758655-17758674 None:intergenic 40.0%
!! CACAGTCAAGATTAGTCTTG+GGG - chr7_1:17758692-17758711 Msa1012580:CDS 40.0%
ATGTTGTAACGAACCACGAA+AGG + chr7_1:17758732-17758751 None:intergenic 40.0%
! ATCTGATTTGATGGCATTGG+CGG + chr7_1:17758952-17758971 None:intergenic 40.0%
! AGGCCTTCAATCTGATTTGA+TGG + chr7_1:17758961-17758980 None:intergenic 40.0%
!! TCCTACGTTTTGATCGTCTT+AGG + chr7_1:17758981-17759000 None:intergenic 40.0%
AACCTATGTAACGTTTGGGT+TGG + chr7_1:17759008-17759027 None:intergenic 40.0%
AGGTTCTTCTGTTGAGAAGT+TGG - chr7_1:17759023-17759042 Msa1012580:CDS 40.0%
TCTGTTGAGAAGTTGGAAGT+TGG - chr7_1:17759030-17759049 Msa1012580:CDS 40.0%
!!! AAGTTGGTACTTTTCGAACG+AGG - chr7_1:17759046-17759065 Msa1012580:CDS 40.0%
GGAGCTTATTTGATAGAGGA+TGG - chr7_1:17759081-17759100 Msa1012580:CDS 40.0%
TTGATAGAGGATGGTAAGAG+TGG - chr7_1:17759090-17759109 Msa1012580:CDS 40.0%
AAACGAAATGGGAAGGGATT+CGG - chr7_1:17759304-17759323 Msa1012580:CDS 40.0%
! GAAGGGATTCGGTTCAAAAA+AGG - chr7_1:17759315-17759334 Msa1012580:CDS 40.0%
! ATAATTGGCTCTTCTTCAGC+CGG + chr7_1:17759465-17759484 None:intergenic 40.0%
! TGATGACTTGTCTGCCATTT+GGG - chr7_1:17759548-17759567 Msa1012580:intron 40.0%
GGAAGAAATGGATACTGCTA+TGG - chr7_1:17759569-17759588 Msa1012580:intron 40.0%
TTGTCTTCTTGATGGAACTG+AGG - chr7_1:17759599-17759618 Msa1012580:intron 40.0%
TCTACATTTGAACCCTGCAA+CGG + chr7_1:17759768-17759787 None:intergenic 40.0%
GGAATATTCTGTACTAGCTG+TGG - chr7_1:17759846-17759865 Msa1012580:intron 40.0%
ATCCCTCATGCAAGAAAGAT+CGG - chr7_1:17760372-17760391 Msa1012580:intron 40.0%
TTCCGATCTTTCTTGCATGA+GGG + chr7_1:17760377-17760396 None:intergenic 40.0%
TTTCCGATCTTTCTTGCATG+AGG + chr7_1:17760378-17760397 None:intergenic 40.0%
CAAGAAAGATCGGAAACAAG+TGG - chr7_1:17760382-17760401 Msa1012580:intron 40.0%
!! GATTTTGGTGCAAGGACTAA+TGG + chr7_1:17760502-17760521 None:intergenic 40.0%
!! AAAGTGTGGATTTTGGTGCA+AGG + chr7_1:17760510-17760529 None:intergenic 40.0%
TTTGCACCATGTGTAAAGTG+TGG + chr7_1:17760524-17760543 None:intergenic 40.0%
ATGGATAAGATACACAGGCA+CGG + chr7_1:17760569-17760588 None:intergenic 40.0%
TTGAATCTCTCTGTGTTCGA+CGG + chr7_1:17760594-17760613 None:intergenic 40.0%
TCGAACACAGAGAGATTCAA+CGG - chr7_1:17760594-17760613 Msa1012580:intron 40.0%
TTTACATCACCAGAAGGTCT+TGG + chr7_1:17760649-17760668 None:intergenic 40.0%
! AGGGCTTTCTCTCAAAGTTT+TGG + chr7_1:17760800-17760819 None:intergenic 40.0%
! AAAACTTTGAGAGAAAGCCC+TGG - chr7_1:17760799-17760818 Msa1012580:intron 40.0%
! GAAGCACTAAATCAAGGTTG+AGG - chr7_1:17760854-17760873 Msa1012580:intron 40.0%
TGGAACTTCCTACAGAATTG+AGG - chr7_1:17760887-17760906 Msa1012580:intron 40.0%
AATTCCTCTGATACACTTCC+TGG - chr7_1:17761201-17761220 Msa1012580:intron 40.0%
! TAAACCAGGAAGTGTATCAG+AGG + chr7_1:17761208-17761227 None:intergenic 40.0%
!! GTAGAGCTTTTGATAACCCT+TGG - chr7_1:17761330-17761349 Msa1012580:intron 40.0%
!!! GTTGCTGTTTTGATCAACCA+TGG + chr7_1:17761366-17761385 None:intergenic 40.0%
TTGCCGAAGATGAATTGAAG+AGG - chr7_1:17761406-17761425 Msa1012580:intron 40.0%
GATGAATTGAAGAGGCTAGA+CGG - chr7_1:17761414-17761433 Msa1012580:intron 40.0%
! TGAAAAATCTCAGAGGTGCA+AGG + chr7_1:17761539-17761558 None:intergenic 40.0%
! AAAGAGGTTCTGCTACTTAC+TGG - chr7_1:17761597-17761616 Msa1012580:intron 40.0%
GTGTATCAGTTATTGACGAC+CGG - chr7_1:17761837-17761856 Msa1012580:intron 40.0%
TGTATCAGTTATTGACGACC+GGG - chr7_1:17761838-17761857 Msa1012580:intron 40.0%
GAAGAACTACTTGGAAAGAG+TGG - chr7_1:17761883-17761902 Msa1012580:intron 40.0%
ATCACGAGGCATATTCGTTA+CGG + chr7_1:17762054-17762073 None:intergenic 40.0%
AATATGCCTCGTGATACAGA+AGG - chr7_1:17762059-17762078 Msa1012580:intron 40.0%
CCAAATCTGATCCTTCTAGA+AGG + chr7_1:17762094-17762113 None:intergenic 40.0%
! CCTTCTAGAAGGATCAGATT+TGG - chr7_1:17762091-17762110 Msa1012580:CDS 40.0%
GCCCTAGTCTATTATGCATG+AGG - chr7_1:17755818-17755837 Msa1012580:CDS 45.0%
CTCCTAGCGTGCATCTTTAT+TGG + chr7_1:17756070-17756089 None:intergenic 45.0%
CAATAAAGATGCACGCTAGG+AGG - chr7_1:17756068-17756087 Msa1012580:CDS 45.0%
ATAAAGATGCACGCTAGGAG+GGG - chr7_1:17756070-17756089 Msa1012580:CDS 45.0%
CTATTAGTGGAAGTCCTTGG+TGG + chr7_1:17756635-17756654 None:intergenic 45.0%
! TTTGAAGTTTGGGGAGTGGT+TGG + chr7_1:17756729-17756748 None:intergenic 45.0%
! GGTATTTGAAGTTTGGGGAG+TGG + chr7_1:17756733-17756752 None:intergenic 45.0%
ATTCCACCTCCAAAGGTCTT+GGG + chr7_1:17756890-17756909 None:intergenic 45.0%
! AGGGTGCTAATAGGGATTGT+AGG + chr7_1:17756975-17756994 None:intergenic 45.0%
! CAGACAGCAAGAGTACAAGT+CGG - chr7_1:17757125-17757144 Msa1012580:CDS 45.0%
!! GTTTGTTTTCCTTGCGGGTT+TGG - chr7_1:17757790-17757809 Msa1012580:intron 45.0%
CTCCAAATGTCAAATCGGGT+TGG - chr7_1:17758253-17758272 Msa1012580:intron 45.0%
! GTCCAACCCGATTTGACATT+TGG + chr7_1:17758258-17758277 None:intergenic 45.0%
GCCTAAGACGATCAAAACGT+AGG - chr7_1:17758977-17758996 Msa1012580:CDS 45.0%
GTCCAACCCAAACGTTACAT+AGG - chr7_1:17759003-17759022 Msa1012580:CDS 45.0%
GGATGGTAAGAGTGGTGAAA+AGG - chr7_1:17759098-17759117 Msa1012580:CDS 45.0%
GGTAAGAGTGGTGAAAAGGT+AGG - chr7_1:17759102-17759121 Msa1012580:CDS 45.0%
AAGGAGGCGAATTCATGGTT+CGG - chr7_1:17759266-17759285 Msa1012580:CDS 45.0%
! AGTGTCGAAAAGCGATGATG+AGG - chr7_1:17759515-17759534 Msa1012580:intron 45.0%
CAAATGGCAGACAAGTCATC+AGG + chr7_1:17759549-17759568 None:intergenic 45.0%
! CTGATGACTTGTCTGCCATT+TGG - chr7_1:17759547-17759566 Msa1012580:intron 45.0%
! GTCTGCCATTTGGGAAGAAA+TGG - chr7_1:17759557-17759576 Msa1012580:intron 45.0%
GCAGCAAGTTGTCTTCTTGA+TGG - chr7_1:17759591-17759610 Msa1012580:intron 45.0%
GTTGCAGGGTTCAAATGTAG+AGG - chr7_1:17759767-17759786 Msa1012580:CDS 45.0%
!! GAAAAACATTGCTGGCTCCA+TGG - chr7_1:17760345-17760364 Msa1012580:intron 45.0%
GATCTTTCTTGCATGAGGGA+TGG + chr7_1:17760373-17760392 None:intergenic 45.0%
GAAAGATCGGAAACAAGTGG+TGG - chr7_1:17760385-17760404 Msa1012580:intron 45.0%
TGTGTCATATCACATGCTCC+TGG - chr7_1:17760409-17760428 Msa1012580:intron 45.0%
! AGAAAGGTTTTTCCAGCTCC+AGG + chr7_1:17760430-17760449 None:intergenic 45.0%
! AGGACTAATGGTCTTTTCCC+AGG + chr7_1:17760490-17760509 None:intergenic 45.0%
TGGATAAGATACACAGGCAC+GGG + chr7_1:17760568-17760587 None:intergenic 45.0%
GTGCCTGTGTATCTTATCCA+TGG - chr7_1:17760568-17760587 Msa1012580:intron 45.0%
TTCAACGGCTCCAAAACCTA+CGG - chr7_1:17760609-17760628 Msa1012580:intron 45.0%
ACACCCAAGTGTTCTTGTCA+TGG - chr7_1:17760711-17760730 Msa1012580:intron 45.0%
CACCCAAGTGTTCTTGTCAT+GGG - chr7_1:17760712-17760731 Msa1012580:intron 45.0%
AGCCCATGACAAGAACACTT+GGG + chr7_1:17760717-17760736 None:intergenic 45.0%
TAGCCCATGACAAGAACACT+TGG + chr7_1:17760718-17760737 None:intergenic 45.0%
TCAAAAGCTCTACCTCGAGA+GGG + chr7_1:17761323-17761342 None:intergenic 45.0%
ATCAAAAGCTCTACCTCGAG+AGG + chr7_1:17761324-17761343 None:intergenic 45.0%
! CCATGGATGTATCGATCCAA+GGG + chr7_1:17761349-17761368 None:intergenic 45.0%
! ACCATGGATGTATCGATCCA+AGG + chr7_1:17761350-17761369 None:intergenic 45.0%
AAGTTTGAAGATCCTCGCAG+CGG - chr7_1:17761657-17761676 Msa1012580:intron 45.0%
CAGCGGTTCAAAGATACTTC+TGG - chr7_1:17761674-17761693 Msa1012580:intron 45.0%
TCAATCAACGCTTGTGCTGA+AGG - chr7_1:17761699-17761718 Msa1012580:intron 45.0%
TCGTCCTGGTCAGCAAAAAA+TGG - chr7_1:17761809-17761828 Msa1012580:intron 45.0%
ACTTAGGGAGATGGTTGAAG+AGG - chr7_1:17761983-17762002 Msa1012580:intron 45.0%
!!! ATTTTCTTTAATATATTTTT+TGG - chr7_1:17757851-17757870 Msa1012580:intron 5.0%
!!! TTTTCTTTAATATATTTTTT+GGG - chr7_1:17757852-17757871 Msa1012580:intron 5.0%
!!! ATTATTTTAAATATAATGAT+AGG - chr7_1:17760093-17760112 Msa1012580:intron 5.0%
GGCCAATAAAGATGCACGCT+AGG - chr7_1:17756065-17756084 Msa1012580:CDS 50.0%
TAAAGATGCACGCTAGGAGG+GGG - chr7_1:17756071-17756090 Msa1012580:CDS 50.0%
GGTGAAAAACGTCTCCACCA+AGG - chr7_1:17756618-17756637 Msa1012580:CDS 50.0%
! GGGAGTGGTTGGTTACATAG+GGG + chr7_1:17756718-17756737 None:intergenic 50.0%
! GGGGAGTGGTTGGTTACATA+GGG + chr7_1:17756719-17756738 None:intergenic 50.0%
! TGGGGAGTGGTTGGTTACAT+AGG + chr7_1:17756720-17756739 None:intergenic 50.0%
!! AAGAGTTCGAAGCGTTGCAC+GGG + chr7_1:17756798-17756817 None:intergenic 50.0%
!! GAAGAGTTCGAAGCGTTGCA+CGG + chr7_1:17756799-17756818 None:intergenic 50.0%
GAAAGAACCCCCAAGACCTT+TGG - chr7_1:17756878-17756897 Msa1012580:CDS 50.0%
TTCCACCTCCAAAGGTCTTG+GGG + chr7_1:17756889-17756908 None:intergenic 50.0%
CATTCCACCTCCAAAGGTCT+TGG + chr7_1:17756891-17756910 None:intergenic 50.0%
! CAGCAAGAGTACAAGTCGGA+TGG - chr7_1:17757129-17757148 Msa1012580:CDS 50.0%
GAATGACTCATGGCAACCTG+TGG - chr7_1:17758075-17758094 Msa1012580:CDS 50.0%
!! GAGCATTGATCAGCTTCGTG+AGG + chr7_1:17758457-17758476 None:intergenic 50.0%
TACGAGGATCAAGGTTCCCT+TGG - chr7_1:17758499-17758518 Msa1012580:CDS 50.0%
CGAACGAGGCCATACAAGAT+AGG - chr7_1:17759060-17759079 Msa1012580:CDS 50.0%
!! AAGAAGAATGGTGCTGCTGC+TGG - chr7_1:17759162-17759181 Msa1012580:CDS 50.0%
TCTGCAAAGAGAAGCCTGCA+AGG - chr7_1:17759247-17759266 Msa1012580:CDS 50.0%
TTGCATGAGGGATGGTTCCA+TGG + chr7_1:17760365-17760384 None:intergenic 50.0%
ATATCACATGCTCCTGGAGC+TGG - chr7_1:17760415-17760434 Msa1012580:intron 50.0%
CGGCCATGGATAAGATACAC+AGG + chr7_1:17760574-17760593 None:intergenic 50.0%
! CCAGGAAGAACCGTAGGTTT+TGG + chr7_1:17760622-17760641 None:intergenic 50.0%
CCAAAACCTACGGTTCTTCC+TGG - chr7_1:17760619-17760638 Msa1012580:intron 50.0%
! GAAAGCGCAGCATTTGCTTG+AGG - chr7_1:17761047-17761066 Msa1012580:intron 50.0%
CCCTTGGATCGATACATCCA+TGG - chr7_1:17761346-17761365 Msa1012580:intron 50.0%
AGTATCTTTGAACCGCTGCG+AGG + chr7_1:17761672-17761691 None:intergenic 50.0%
CTTATCTTCCTCCATCGACC+CGG + chr7_1:17761859-17761878 None:intergenic 50.0%
TGCTGTCCTTCTGTATCACG+AGG + chr7_1:17762068-17762087 None:intergenic 50.0%
CGTGATACAGAAGGACAGCA+AGG - chr7_1:17762068-17762087 Msa1012580:intron 50.0%
TGCAAGAGCCACAGTCTGTT+AGG - chr7_1:17762117-17762136 Msa1012580:CDS 50.0%
TCACCCTTTCGTCCTCGCTT+CGG - chr7_1:17756577-17756596 Msa1012580:CDS 55.0%
CGGGCTACGTCTACTCTTCT+TGG - chr7_1:17756597-17756616 Msa1012580:CDS 55.0%
! AAGCGTTGCACGGGTGATTG+AGG + chr7_1:17756789-17756808 None:intergenic 55.0%
AGAACCCCCAAGACCTTTGG+AGG - chr7_1:17756881-17756900 Msa1012580:CDS 55.0%
TCCACCTCCAAAGGTCTTGG+GGG + chr7_1:17756888-17756907 None:intergenic 55.0%
CAGCTTCGTGAGGTTGTCTC+TGG + chr7_1:17758447-17758466 None:intergenic 55.0%
GAAAAGGTAGGCGATGCTGC+TGG - chr7_1:17759114-17759133 Msa1012580:CDS 55.0%
GCAAAGAGAAGCCTGCAAGG+AGG - chr7_1:17759250-17759269 Msa1012580:CDS 55.0%
CCATGAATTCGCCTCCTTGC+AGG + chr7_1:17759264-17759283 None:intergenic 55.0%
CCTGCAAGGAGGCGAATTCA+TGG - chr7_1:17759261-17759280 Msa1012580:CDS 55.0%
GGAACTCCAGGAAGAACCGT+AGG + chr7_1:17760628-17760647 None:intergenic 55.0%
CCAGAAGGTCTTGGAACTCC+AGG + chr7_1:17760640-17760659 None:intergenic 55.0%
CCTGGAGTTCCAAGACCTTC+TGG - chr7_1:17760637-17760656 Msa1012580:intron 55.0%
TACCACCAGTTACCCTCTCG+AGG - chr7_1:17761308-17761327 Msa1012580:intron 55.0%
TACCTCGAGAGGGTAACTGG+TGG + chr7_1:17761313-17761332 None:intergenic 55.0%
CTCTACCTCGAGAGGGTAAC+TGG + chr7_1:17761316-17761335 None:intergenic 55.0%
! ATTGCACGCGCTTTTCGTCC+TGG - chr7_1:17761795-17761814 Msa1012580:intron 55.0%
GTTATTGACGACCGGGTCGA+TGG - chr7_1:17761845-17761864 Msa1012580:intron 55.0%
GGACAGCAAGGCCTTCTAGA+AGG - chr7_1:17762080-17762099 Msa1012580:intron 55.0%
AGGAGGGGGTGGGTGAATAG+CGG - chr7_1:17756085-17756104 Msa1012580:CDS 60.0%
CACCCTTTCGTCCTCGCTTC+GGG - chr7_1:17756578-17756597 Msa1012580:CDS 60.0%
AGCCCGAAGCGAGGACGAAA+GGG + chr7_1:17756583-17756602 None:intergenic 60.0%
TAGCCCGAAGCGAGGACGAA+AGG + chr7_1:17756584-17756603 None:intergenic 60.0%
AGTAGACGTAGCCCGAAGCG+AGG + chr7_1:17756592-17756611 None:intergenic 60.0%
! ACCCCCAAGACCTTTGGAGG+TGG - chr7_1:17756884-17756903 Msa1012580:CDS 60.0%
GGGCATACACCAAACCCGCA+AGG + chr7_1:17757802-17757821 None:intergenic 60.0%
CTCTCTGTGTTCGACGGCCA+TGG + chr7_1:17760588-17760607 None:intergenic 60.0%
CGCAGCATTTGCTTGAGGCG+CGG - chr7_1:17761052-17761071 Msa1012580:intron 60.0%
GCAGCATTTGCTTGAGGCGC+GGG - chr7_1:17761053-17761072 Msa1012580:intron 60.0%
ATTGACGACCGGGTCGATGG+AGG - chr7_1:17761848-17761867 Msa1012580:intron 60.0%
AGATGCACGCTAGGAGGGGG+TGG - chr7_1:17756074-17756093 Msa1012580:CDS 65.0%
GATGCACGCTAGGAGGGGGT+GGG - chr7_1:17756075-17756094 Msa1012580:CDS 65.0%
ATTTGCTTGAGGCGCGGGCG+AGG - chr7_1:17761058-17761077 Msa1012580:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 17755743 17762145 17755743 ID=Msa1012580;Name=Msa1012580
chr7_1 mRNA 17755743 17762145 17755743 ID=Msa1012580-mRNA-1;Parent=Msa1012580;Name=Msa1012580-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|0.8|1|1|5|0|1217
chr7_1 exon 17762091 17762145 17762091 ID=Msa1012580-mRNA-1:exon:4482;Parent=Msa1012580-mRNA-1
chr7_1 exon 17759603 17759829 17759603 ID=Msa1012580-mRNA-1:exon:4481;Parent=Msa1012580-mRNA-1
chr7_1 exon 17758268 17759473 17758268 ID=Msa1012580-mRNA-1:exon:4480;Parent=Msa1012580-mRNA-1
chr7_1 exon 17757980 17758114 17757980 ID=Msa1012580-mRNA-1:exon:4479;Parent=Msa1012580-mRNA-1
chr7_1 exon 17755743 17757773 17755743 ID=Msa1012580-mRNA-1:exon:4478;Parent=Msa1012580-mRNA-1
chr7_1 CDS 17762091 17762145 17762091 ID=Msa1012580-mRNA-1:cds;Parent=Msa1012580-mRNA-1
chr7_1 CDS 17759603 17759829 17759603 ID=Msa1012580-mRNA-1:cds;Parent=Msa1012580-mRNA-1
chr7_1 CDS 17758268 17759473 17758268 ID=Msa1012580-mRNA-1:cds;Parent=Msa1012580-mRNA-1
chr7_1 CDS 17757980 17758114 17757980 ID=Msa1012580-mRNA-1:cds;Parent=Msa1012580-mRNA-1
chr7_1 CDS 17755743 17757773 17755743 ID=Msa1012580-mRNA-1:cds;Parent=Msa1012580-mRNA-1
Gene Sequence

>Msa1012580

ATGGCCCCTAGAAAAAGGCATTTGCAACAATTGAATCCATTTGATGATGCTTACCCATTTGAAGCAATAAGGAATGACTCATGGCAACCTGTGGAGCTTATAAAAATTGAGTTTGGAAAAACAACCTTACATTTCATGGATACTCAACAAATGCAAACCCCTTTGTCATCTGATATTCGCATAAGATCAAGAAAAGCTACTTCATTTGATTGCTCTAACTTTTTACGACGCGGAATTGACATATCTATGCTCCAAATGTCAAATCGGGTTGGACCTATTCCAACGTCAATCGATGCAAGAATAAATTCAATCCAGAGACAACCTCACGAAGCTGATCAATGCTCATGTCAGTTTTATGTAAATTTCTACGAGGATCAAGGTTCCCTTGGTAGAAATATAAAAACACTTAATAAAGAGGTTTATGCGACTGGAATAGATCGAATATTTATCCTCCAAAGGCTTCAATATAATAGTTGCGAAGGCTTAATAAAAAATAGTGATAGTTCTGAAGTGGTTAAGCCTTATAGGTGGGATTCATCTGAAGATTGCTCTTCATTATCACAGTCAAGATTAGTCTTGGGGAGATTTTTATCTGACCTTTCGTGGTTCGTTACAACATCCTTTTTAAAGAAGGTTTCATTCAGTATCCGATCTATTCAAAATAAGATTGTGTATCATGTCATGGAAAACGATACTGATATTATTGATCCTTCTCTTATAAATGTTGTGAACTTCAAATCGGAAAAGGGATCAATAGTACCTGTAGTTTCTCTATTTGATATGTTTTGTGATTATGATGGAGAAGAAGATGAAACGCCGCCAATGCCATCAAATCAGATTGAAGGCCTAAGACGATCAAAACGTAGGAATGTCCAACCCAAACGTTACATAGGTTCTTCTGTTGAGAAGTTGGAAGTTGGTACTTTTCGAACGAGGCCATACAAGATAGGAGCTTATTTGATAGAGGATGGTAAGAGTGGTGAAAAGGTAGGCGATGCTGCTGGCGAAATTCCTTCAAAATATCTTTCAAAGAAGAATGGTGCTGCTGCTGGTGTTACAATATCAAGTGATTTGGAAGTTGATGATAATGTTACTTTGGGACATTATTATAGCTTCTGCAAAGAGAAGCCTGCAAGGAGGCGAATTCATGGTTCGGATGATATGGATTTTGAAACGAAATGGGAAGGGATTCGGTTCAAAAAAGGAGCTCAAACAAAAAGATACCATTCAATTTGTTTGACAAACAGAAGTAATAAAGGTGGCAGAACGTTAAATGTTGATGCACAGAAGGAAATAATTGACACTTACATGAAGAATTTGGATAGTCTTCCGGCTGAAGAAGAGCCAATTATAAATGAAGAAACAAAGTTGGAGGAAGAAAAAGTGTCGAAAAGCGATGATGAGGAAGAAAATCCTGATGACTTGTCTGCCATTTGGGAAGAAATGGATACTGCTATGGCAGCAAGTTGTCTTCTTGATGGAACTGAGGGTTCAAATGTAGAGGTTTTAGCAGACACCAATGAAATTTGTGAACATGACTATACGTTCAATGAAGAAATTGGAATATTCTGTACTAGCTGTGGCTCTGTGAAAACTGAGATACGAGACATTACTGAACTCGTTGTGGAAAGACAAAAATGGCAGAAAGAGGAGAAACAATACAGTGGAGAAGTTAATGATGAACAAAAATCAGAGGCAAAAGTTGATGAAGATGATAATAATGATATGTTCTCGACTCATGCTACTGATCGTGATGAACCAATACCTGCAGAAAAAGACAATGTTTGGGAATTGATTCCAGAACTCAAAGAAAAGATGCATGCGCACCAGCAAAAAGCTTTTGAGTTTCTTTGGAAAAACATTGCTGGCTCCATGGAACCATCCCTCATGCAAGAAAGATCGGAAACAAGTGGTGGATGTGTCATATCACATGCTCCTGGAGCTGGAAAAACCTTTCTCGTCATTTCGTTTCTTGTAAGTTACTTGAAGTTATTTCCTGGGAAAAGACCATTAGTCCTTGCACCAAAATCCACACTTTACACATGGTGCAAAGAGTTCAAAAAATGGAAAGTTCCCGTGCCTGTGTATCTTATCCATGGCCGTCGAACACAGAGAGATTCAACGGCTCCAAAACCTACGGTTCTTCCTGGAGTTCCAAGACCTTCTGGTGATGTAAAACATGTTTTGGATTGTCTTGGAAAAATAAAAAAGTGGCATTCACACCCAAGTGTTCTTGTCATGGGCTATACTTCATTTTTAGCCTTAATGAGACAAGATACAAAATTTGCACACAGAAAGTACATGGCCAAAACTTTGAGAGAAAGCCCTGGAATCTTGATACTTGATGAAGGTCACAATCCTAGAAGCACTAAATCAAGGTTGAGGAAATGCTTAATGGAACTTCCTACAGAATTGAGGATTTTACTTTCTGGCACTTTGTTTCAGAACAATTTCTGCGAATATTTCAACACATTGTGTTTAGCAAGACCAAAATTTGTTCACGAAGTGCTACGAGAGTTAGATTCTAAATACTTGAGGAGAGGTAATAGAGAGAAGAAAGCGCAGCATTTGCTTGAGGCGCGGGCGAGGAAATTCTTCTTGAACAACATTGCTACGAAAATCAACTCAGATAACGATGAGGAAAAAATGCAGGGTCTACATGTGCTGCGAAAGATCACGAGCAGTTTCATCAACGTTTATGAAAGTGGAAATTCCTCTGATACACTTCCTGGTTTACAAATATATACACTGTTCATGAATACGTCCGATGAACAGCTTGAGATTATACAGAAACTGCAGAAGAAAATGGCTGAGTGTACCACCAGTTACCCTCTCGAGGTAGAGCTTTTGATAACCCTTGGATCGATACATCCATGGTTGATCAAAACAGCAACACCATGTGCAGATAAGTTTTTTGCCGAAGATGAATTGAAGAGGCTAGACGGAATCAAATTTGATTTAAGAAAAGGTTCCAAAATAAGATTTGTTCTGAGCCTAATCTCACGTGTAGTGAAAAATGAAAAGGTTCTTATCTTTTGTCACTACCTTGCACCTCTGAGATTTTTCATAGAGTTATTTGAGAAATACTTTCAATGGCAAAATGGAAAAGAGGTTCTGCTACTTACTGGTGATCTAGATTTGTTTGAAAGAGGAAAAATGATTGATAAGTTTGAAGATCCTCGCAGCGGTTCAAAGATACTTCTGGCTTCAATCAACGCTTGTGCTGAAGGTATTAGTTTAACAGCTGCTTCTAGAGTGATATTTTTGGATTCTGAATGGAATCCTTCAAAAACAAAGCAAGCTATTGCACGCGCTTTTCGTCCTGGTCAGCAAAAAATGGTTTATGTGTATCAGTTATTGACGACCGGGTCGATGGAGGAAGATAAGTATCGAAGAACTACTTGGAAAGAGTGGGTTTCTTGCATGATTTTTAGTGAGGAGTTTGTGGAAGATCCTTCTAAATGGCAAGCAGAAAAGATTGAAGATGAAATACTTAGGGAGATGGTTGAAGAGGATAAGTCTAAAGCTATTCATATGATTATGAAGAATGAAAAGGATTCCGTAACGAATATGCCTCGTGATACAGAAGGACAGCAAGGCCTTCTAGAAGGATCAGATTTGGTTATGCAAGAGCCACAGTCTGTTAGGCACTAG
Protein sequence

>Msa1012580

MAPRKRHLQQLNPFDDAYPFEAIRNDSWQPVELIKIEFGKTTLHFMDTQQMQTPLSSDIRIRSRKATSFDCSNFLRRGIDISMLQMSNRVGPIPTSIDARINSIQRQPHEADQCSCQFYVNFYEDQGSLGRNIKTLNKEVYATGIDRIFILQRLQYNSCEGLIKNSDSSEVVKPYRWDSSEDCSSLSQSRLVLGRFLSDLSWFVTTSFLKKVSFSIRSIQNKIVYHVMENDTDIIDPSLINVVNFKSEKGSIVPVVSLFDMFCDYDGEEDETPPMPSNQIEGLRRSKRRNVQPKRYIGSSVEKLEVGTFRTRPYKIGAYLIEDGKSGEKVGDAAGEIPSKYLSKKNGAAAGVTISSDLEVDDNVTLGHYYSFCKEKPARRRIHGSDDMDFETKWEGIRFKKGAQTKRYHSICLTNRSNKGGRTLNVDAQKEIIDTYMKNLDSLPAEEEPIINEETKLEEEKVSKSDDEEENPDDLSAIWEEMDTAMAASCLLDGTEGSNVEVLADTNEICEHDYTFNEEIGIFCTSCGSVKTEIRDITELVVERQKWQKEEKQYSGEVNDEQKSEAKVDEDDNNDMFSTHATDRDEPIPAEKDNVWELIPELKEKMHAHQQKAFEFLWKNIAGSMEPSLMQERSETSGGCVISHAPGAGKTFLVISFLVSYLKLFPGKRPLVLAPKSTLYTWCKEFKKWKVPVPVYLIHGRRTQRDSTAPKPTVLPGVPRPSGDVKHVLDCLGKIKKWHSHPSVLVMGYTSFLALMRQDTKFAHRKYMAKTLRESPGILILDEGHNPRSTKSRLRKCLMELPTELRILLSGTLFQNNFCEYFNTLCLARPKFVHEVLRELDSKYLRRGNREKKAQHLLEARARKFFLNNIATKINSDNDEEKMQGLHVLRKITSSFINVYESGNSSDTLPGLQIYTLFMNTSDEQLEIIQKLQKKMAECTTSYPLEVELLITLGSIHPWLIKTATPCADKFFAEDELKRLDGIKFDLRKGSKIRFVLSLISRVVKNEKVLIFCHYLAPLRFFIELFEKYFQWQNGKEVLLLTGDLDLFERGKMIDKFEDPRSGSKILLASINACAEGISLTAASRVIFLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLTTGSMEEDKYRRTTWKEWVSCMIFSEEFVEDPSKWQAEKIEDEILREMVEEDKSKAIHMIMKNEKDSVTNMPRDTEGQQGLLEGSDLVMQEPQSVRH*