AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1012680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1012680 MtrunA17_Chr7g0224271 98.516 674 10 0 1 674 1 674 0.0 1383
Msa1012680 MtrunA17_Chr4g0057891 41.604 399 211 6 288 674 133 521 5.57e-97 308
Msa1012680 MtrunA17_Chr8g0376381 41.646 401 192 10 284 673 153 522 1.93e-93 299
Msa1012680 MtrunA17_Chr7g0245601 42.175 377 185 6 304 673 442 792 1.94e-93 306
Msa1012680 MtrunA17_Chr2g0306641 42.000 400 191 10 290 674 115 488 3.45e-92 295
Msa1012680 MtrunA17_Chr3g0110971 35.687 524 269 13 184 673 98 587 4.02e-92 297
Msa1012680 MtrunA17_Chr8g0357601 40.863 394 206 6 292 673 174 552 1.85e-88 287
Msa1012680 MtrunA17_Chr5g0447691 40.204 393 205 5 293 673 170 544 2.51e-88 286
Msa1012680 MtrunA17_Chr4g0057291 38.046 389 218 7 294 672 286 661 6.03e-81 270
Msa1012680 MtrunA17_Chr1g0159461 39.332 389 202 6 299 673 224 592 1.12e-79 265
Msa1012680 MtrunA17_Chr3g0101141 32.734 556 296 10 162 673 21 542 1.12e-78 260
Msa1012680 MtrunA17_Chr4g0038761 38.710 372 209 6 304 673 88 442 1.54e-78 257
Msa1012680 MtrunA17_Chr5g0445331 33.406 461 267 7 233 673 92 532 3.65e-78 259
Msa1012680 MtrunA17_Chr2g0319091 36.259 433 240 5 258 672 164 578 7.95e-78 259
Msa1012680 MtrunA17_Chr3g0125811 37.629 388 210 5 299 673 202 570 3.84e-75 252
Msa1012680 MtrunA17_Chr4g0076091 36.456 395 216 7 295 674 170 544 1.39e-71 241
Msa1012680 MtrunA17_Chr2g0290241 33.081 396 228 6 295 674 52 426 1.59e-69 233
Msa1012680 MtrunA17_Chr4g0031721 34.000 400 234 6 286 672 301 683 1.44e-65 229
Msa1012680 MtrunA17_Chr5g0424131 36.930 417 210 17 288 674 107 500 1.05e-64 222
Msa1012680 MtrunA17_Chr1g0200401 34.383 413 219 14 290 673 70 459 3.23e-64 219
Msa1012680 MtrunA17_Chr1g0183641 34.872 390 225 10 290 674 113 478 7.16e-64 219
Msa1012680 MtrunA17_Chr3g0114841 37.101 407 219 14 290 674 110 501 1.54e-63 219
Msa1012680 MtrunA17_Chr3g0085681 30.140 428 227 5 301 673 26 436 3.50e-62 213
Msa1012680 MtrunA17_Chr7g0238891 32.398 392 234 5 295 673 367 740 2.35e-59 213
Msa1012680 MtrunA17_Chr4g0031701 31.910 398 234 5 291 670 245 623 4.11e-59 210
Msa1012680 MtrunA17_Chr4g0031731 31.910 398 234 5 291 670 245 623 7.16e-58 206
Msa1012680 MtrunA17_Chr2g0328391 31.807 393 237 6 294 672 293 668 5.00e-57 205
Msa1012680 MtrunA17_Chr4g0031741 31.714 391 234 7 295 672 279 649 8.44e-57 204
Msa1012680 MtrunA17_Chr2g0328341 30.848 389 240 6 295 672 267 637 1.10e-56 203
Msa1012680 MtrunA17_Chr4g0031711 31.671 401 237 7 290 672 351 732 2.26e-55 201
Msa1012680 MtrunA17_Chr2g0328381 30.334 389 242 6 295 672 270 640 5.70e-55 199
Msa1012680 MtrunA17_Chr2g0328411 29.771 393 242 5 293 672 282 653 1.96e-54 198
Msa1012680 MtrunA17_Chr2g0328431 29.975 397 236 7 293 672 282 653 1.16e-51 189
Msa1012680 MtrunA17_Chr4g0039661 33.962 371 208 8 316 673 209 555 7.30e-51 185
Msa1012680 MtrunA17_Chr3g0085361 30.747 348 181 5 381 673 8 350 1.14e-48 174
Msa1012680 MtrunA17_Chr2g0294461 31.514 403 248 9 286 673 196 585 1.33e-48 179
Msa1012680 MtrunA17_Chr5g0401131 30.923 401 240 11 293 673 107 490 3.24e-48 176
Msa1012680 MtrunA17_Chr2g0294471 29.703 404 251 11 286 673 190 576 7.78e-46 172
Msa1012680 MtrunA17_Chr2g0328401 27.933 358 226 5 295 640 285 622 3.13e-45 171
Msa1012680 MtrunA17_Chr2g0328361 28.093 388 227 7 295 672 269 614 1.06e-44 169
Msa1012680 MtrunA17_Chr7g0270031 29.723 397 253 9 286 673 175 554 1.37e-44 167
Msa1012680 MtrunA17_Chr8g0383981 32.426 404 221 15 287 672 126 495 5.24e-42 159
Msa1012680 MtrunA17_Chr2g0328371 34.286 245 150 4 387 620 1 245 1.86e-41 151
Msa1012680 MtrunA17_Chr1g0194621 28.571 406 265 11 283 673 123 518 2.73e-41 157
Msa1012680 MtrunA17_Chr5g0396491 37.229 231 123 2 289 516 45 256 8.34e-41 155
Msa1012680 MtrunA17_Chr5g0396491 43.624 149 84 0 525 673 330 478 6.31e-39 150
Msa1012680 MtrunA17_Chr4g0038851 44.595 148 82 0 526 673 322 469 1.89e-39 151
Msa1012680 MtrunA17_Chr4g0038851 35.526 228 131 2 289 516 37 248 1.43e-35 140
Msa1012680 MtrunA17_Chr7g0236851 34.007 297 175 8 392 672 365 656 1.20e-38 152
Msa1012680 MtrunA17_Chr7g0230771 29.124 388 238 11 297 674 372 732 4.75e-36 144
Msa1012680 MtrunA17_Chr7g0230731 29.124 388 238 11 297 674 369 729 3.27e-35 142
Msa1012680 MtrunA17_Chr2g0329591 26.329 395 253 10 300 673 74 451 2.39e-33 133
Msa1012680 MtrunA17_Chr6g0468561 29.383 405 216 13 301 673 296 662 2.55e-33 136
Msa1012680 MtrunA17_Chr4g0053901 25.714 420 254 9 300 672 59 467 5.04e-32 130
Msa1012680 MtrunA17_Chr4g0012071 28.238 386 235 12 301 674 197 552 1.23e-31 130
Msa1012680 MtrunA17_Chr5g0401421 24.882 422 257 11 300 672 35 445 3.34e-31 127
Msa1012680 MtrunA17_Chr8g0373561 27.226 393 242 14 297 674 179 542 6.18e-29 121
Msa1012680 MtrunA17_Chr8g0344101 23.587 407 251 12 299 673 222 600 1.50e-19 93.2
Msa1012680 MtrunA17_Chr2g0323111 26.286 175 120 3 505 672 133 305 5.12e-14 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1012680 AT1G66350.1 43.846 390 185 11 291 674 146 507 1.01e-96 307
Msa1012680 AT3G03450.1 41.837 392 199 8 291 673 174 545 6.02e-94 301
Msa1012680 AT3G54220.1 41.709 398 196 6 285 672 278 649 3.08e-93 302
Msa1012680 AT1G14920.1 40.458 393 198 9 291 673 163 529 3.49e-89 288
Msa1012680 AT5G17490.1 42.711 391 191 10 291 673 151 516 2.65e-88 286
Msa1012680 AT5G41920.1 40.759 395 202 9 287 673 30 400 1.27e-86 277
Msa1012680 AT2G01570.1 40.204 393 199 10 291 673 215 581 4.14e-86 282
Msa1012680 AT2G04890.1 39.949 393 209 5 287 673 42 413 2.56e-84 271
Msa1012680 AT5G48150.1 39.481 385 204 5 301 673 123 490 3.19e-83 271
Msa1012680 AT5G48150.4 39.481 385 204 5 301 673 123 490 3.19e-83 271
Msa1012680 AT5G48150.2 39.481 385 204 5 301 673 123 490 3.19e-83 271
Msa1012680 AT5G48150.3 39.481 385 204 5 301 673 123 490 3.19e-83 271
Msa1012680 AT1G50600.3 38.817 389 208 6 297 673 156 526 2.31e-74 249
Msa1012680 AT1G50600.1 39.332 389 206 7 297 673 227 597 5.72e-74 250
Msa1012680 AT1G50600.2 39.332 389 206 7 297 673 231 601 8.18e-74 249
Msa1012680 AT1G21450.1 36.434 387 217 4 299 673 224 593 2.30e-72 245
Msa1012680 AT1G55580.1 37.438 406 226 8 296 673 40 445 1.62e-71 239
Msa1012680 AT4G17230.1 36.061 391 220 4 295 673 153 525 3.87e-68 232
Msa1012680 AT4G17230.2 36.061 391 220 4 295 673 153 525 3.87e-68 232
Msa1012680 AT1G63100.1 34.343 396 228 7 295 672 247 628 4.28e-66 229
Msa1012680 AT1G63100.2 34.343 396 228 7 295 672 272 653 6.51e-66 229
Msa1012680 AT1G07520.2 31.762 403 245 8 286 672 140 528 2.23e-59 209
Msa1012680 AT1G07520.4 31.762 403 245 8 286 672 140 528 2.23e-59 209
Msa1012680 AT1G07520.1 31.592 402 247 7 286 672 304 692 9.68e-59 210
Msa1012680 AT1G07520.3 31.592 402 247 7 286 672 305 693 1.03e-58 210
Msa1012680 AT5G59450.1 29.442 394 246 6 295 673 222 598 1.86e-57 205
Msa1012680 AT3G46600.1 30.326 399 246 5 288 673 200 579 1.93e-57 204
Msa1012680 AT3G46600.3 30.326 399 246 5 288 673 168 547 4.67e-57 203
Msa1012680 AT3G46600.2 30.670 388 237 5 299 673 3 371 1.95e-56 196
Msa1012680 AT1G07530.1 31.538 390 235 6 297 672 393 764 1.14e-55 203
Msa1012680 AT2G29065.1 29.820 389 244 7 300 672 252 627 5.26e-55 199
Msa1012680 AT5G66770.1 35.038 391 217 10 297 673 217 584 1.06e-53 194
Msa1012680 AT2G29060.2 30.612 392 238 7 297 672 281 654 4.70e-53 194
Msa1012680 AT2G29060.1 30.612 392 238 7 297 672 318 691 6.23e-53 194
Msa1012680 AT2G37650.1 29.923 391 243 5 295 673 342 713 9.78e-53 194
Msa1012680 AT2G37650.2 29.923 391 243 5 295 673 330 701 1.09e-52 194
Msa1012680 AT4G08250.1 32.432 407 228 14 288 672 95 476 2.01e-49 180
Msa1012680 AT3G50650.1 33.962 371 205 9 320 673 195 542 3.92e-46 172
Msa1012680 AT4G37650.1 29.397 398 243 10 300 673 146 529 1.15e-43 165
Msa1012680 AT5G52510.1 30.250 400 224 9 301 673 269 640 3.37e-40 157
Msa1012680 AT1G50420.1 45.333 150 82 0 525 674 331 480 7.59e-39 150
Msa1012680 AT1G50420.1 38.496 226 125 2 291 516 48 259 2.89e-38 149
Msa1012680 AT3G49950.1 28.678 401 237 10 299 672 29 407 3.48e-33 132
Msa1012680 AT4G36710.1 27.136 398 255 11 287 673 112 485 9.58e-29 120
Msa1012680 AT4G00150.1 27.612 402 236 14 282 674 200 555 1.39e-28 121
Msa1012680 AT2G45160.1 27.829 327 204 9 367 674 327 640 1.51e-28 121
Msa1012680 AT3G60630.1 28.852 305 191 10 388 674 327 623 2.77e-27 117
Msa1012680 AT3G13840.1 24.557 395 245 14 300 673 148 510 1.99e-14 77.0

Find 156 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTCCAATATCAACAATTT+TGG 0.134391 7_1:-18028618 Msa1012680:CDS
TGTTGCATATATTGATTATT+TGG 0.203768 7_1:+18028749 None:intergenic
GTAGAAGCTTGTGGTGAATT+AGG 0.209436 7_1:+18028929 None:intergenic
CTATCCAAAATTGTTGATAT+TGG 0.238972 7_1:+18028614 None:intergenic
GACTCAATCAAGGATATTAT+TGG 0.253341 7_1:-18026915 Msa1012680:CDS
TGTATTCATGTGATGGTTAC+AGG 0.259318 7_1:-18026889 Msa1012680:CDS
AATAGTAATAACCAACAAAA+AGG 0.261319 7_1:-18028809 Msa1012680:CDS
TGCCTCAAACGCCTCGAAAA+TGG 0.275785 7_1:+18027582 None:intergenic
TTAGGGTTAATGTTTCTAAT+TGG 0.288688 7_1:+18028947 None:intergenic
GATGGTAAGTTTAGGCTTTG+TGG 0.292426 7_1:+18029076 None:intergenic
TAGAAGCTTGTGGTGAATTA+GGG 0.297220 7_1:+18028930 None:intergenic
GACATGAGAGGTTGGAGAAA+TGG 0.307042 7_1:-18026994 Msa1012680:CDS
CTTGATTGAGTCACTGCATT+AGG 0.311878 7_1:+18026926 None:intergenic
GCCAGCTATTGAAGAGTTCT+TGG 0.313450 7_1:-18028708 Msa1012680:CDS
GTATCATCAAATGGGATCTA+TGG 0.314373 7_1:-18028486 Msa1012680:CDS
TCTCTCAAATTTGACTTAGA+TGG 0.323118 7_1:-18029055 Msa1012680:CDS
AACCGTCTCCACCGTGTTCC+TGG 0.336032 7_1:-18027277 Msa1012680:CDS
TTGATGATGACTTGGTTGTT+AGG 0.342078 7_1:+18027758 None:intergenic
GGTCTCTTATCATGGATAAC+AGG 0.350431 7_1:+18027239 None:intergenic
ACTCAATCAAGGATATTATT+GGG 0.352700 7_1:-18026914 Msa1012680:CDS
ATTTGTTTGATTTGAAGAAT+TGG 0.357982 7_1:+18029162 None:intergenic
TCCTCAAGTTGTTCTCCAAC+AGG 0.371000 7_1:+18027358 None:intergenic
TGGTGCTTGGTCTCTTATCA+TGG 0.378979 7_1:+18027231 None:intergenic
ATAAAGGTTGTTTGTTGCTT+GGG 0.381702 7_1:-18026856 Msa1012680:CDS
GTCACTGCATTAGGACTTAG+AGG 0.385725 7_1:+18026935 None:intergenic
CTAACAGTTCCTATTCCAAT+TGG 0.386725 7_1:-18028383 Msa1012680:CDS
GATAAAGGTTGTTTGTTGCT+TGG 0.388205 7_1:-18026857 Msa1012680:CDS
CCATGCAGAAGCAGCGATAA+TGG 0.390323 7_1:+18026820 None:intergenic
GCTTCCCACATTGAACTATC+TGG 0.392042 7_1:+18029013 None:intergenic
TTTGTTTGATTTGAAGAATT+GGG 0.395359 7_1:+18029163 None:intergenic
CCGGCGGTGCTCCGTTCCTT+AGG 0.397678 7_1:-18027477 Msa1012680:CDS
AGGACTTCCATAGGGTTTGA+TGG 0.398057 7_1:+18027673 None:intergenic
CACAAGCTTTACAGCAAGAA+AGG 0.398985 7_1:-18028448 Msa1012680:CDS
AATGCAAAGCCTCGAGAAAT+CGG 0.401833 7_1:+18027152 None:intergenic
GCCAATGCCTGCATGAATGC+AGG 0.402364 7_1:+18027508 None:intergenic
ATGCAAATTCAAAGCCTATC+AGG 0.406320 7_1:-18028872 Msa1012680:CDS
CAGGCCATTGGTAGCCTTGA+AGG 0.407502 7_1:+18027527 None:intergenic
TACAGGTTAACTGAGGATAA+AGG 0.412392 7_1:-18026872 Msa1012680:CDS
CAGGCATTGGCTGCACGGCC+CGG 0.413918 7_1:-18027496 Msa1012680:CDS
ATTTGAGAGATGGTAAGTTT+AGG 0.417615 7_1:+18029068 None:intergenic
TGATGATGACTTGGTTGTTA+GGG 0.418899 7_1:+18027759 None:intergenic
ATCGACCTTGATATCCTTCA+AGG 0.423493 7_1:-18027541 Msa1012680:CDS
GAGTGATATGTATCATCAAA+TGG 0.430639 7_1:-18028495 Msa1012680:CDS
TCCACAAGTGTCACTATGTT+TGG 0.431028 7_1:+18027211 None:intergenic
ATATATTTGCACCGGAGATT+CGG 0.433485 7_1:-18027054 Msa1012680:CDS
CCTAAGGAACGGAGCACCGC+CGG 0.433800 7_1:+18027477 None:intergenic
TCCTTAGGATCACTGGAGTT+GGG 0.435193 7_1:-18027462 Msa1012680:CDS
CTCGAAAATGGCTTGGTTAG+CGG 0.435294 7_1:+18027594 None:intergenic
ATCGAATCGGTTAGGGAAAC+CGG 0.437086 7_1:-18027433 Msa1012680:CDS
TCATGCAGGCATTGGCTGCA+CGG 0.438295 7_1:-18027501 Msa1012680:CDS
GGCCGTGCATCGAATCGGTT+AGG 0.440216 7_1:-18027441 Msa1012680:CDS
GGAGAAATGGAGGAAGATAA+TGG 0.442415 7_1:-18026981 Msa1012680:CDS
TAAATCACCACAAGAATTTG+TGG 0.443098 7_1:+18029120 None:intergenic
AAAATGATGAATTCACTTTG+TGG 0.443783 7_1:-18029220 Msa1012680:CDS
ATTACCTGCTCAATTCCAAT+TGG 0.449064 7_1:+18028368 None:intergenic
TTCCTTAGGATCACTGGAGT+TGG 0.451123 7_1:-18027463 Msa1012680:CDS
GTGTTCCTGGCAATCATCTC+GGG 0.453444 7_1:-18027264 Msa1012680:CDS
GATAGAGAGACATGAGAGGT+TGG 0.454325 7_1:-18027002 Msa1012680:CDS
CAAAATTCTTCAAGCTATTG+TGG 0.454394 7_1:-18028581 Msa1012680:CDS
TGCTCAATTCCAATTGGAAT+AGG 0.456239 7_1:+18028374 None:intergenic
TACTGCTCTACCTTAGCCCT+TGG 0.456368 7_1:+18027076 None:intergenic
AGCAAGAAGCAAGCCATAAC+GGG 0.462121 7_1:-18027189 Msa1012680:CDS
GCCACGATGTTCCGAATCTC+CGG 0.464344 7_1:+18027043 None:intergenic
CCGTGTAGGCGAGGCTTTGG+CGG 0.466492 7_1:-18027311 Msa1012680:CDS
CGTGTTCCTGGCAATCATCT+CGG 0.467483 7_1:-18027265 Msa1012680:CDS
CGAGGCTTTGCATTACTACT+CGG 0.469216 7_1:-18027143 Msa1012680:CDS
ACATTGAACTATCTGGTGAT+TGG 0.469373 7_1:+18029020 None:intergenic
ATGAGAGGTTGGAGAAATGG+AGG 0.478165 7_1:-18026991 Msa1012680:CDS
TCCAAGAACTCTTCAATAGC+TGG 0.478205 7_1:+18028707 None:intergenic
AACACGGTGGAGACGGTTAA+CGG 0.479130 7_1:+18027282 None:intergenic
GCTCCGTTCCTTAGGATCAC+TGG 0.483442 7_1:-18027469 Msa1012680:CDS
TATTCCAATTGGAATTGAGC+AGG 0.485481 7_1:-18028372 Msa1012680:intron
TTCCATAGGGTTTGATGGGA+AGG 0.488537 7_1:+18027678 None:intergenic
GCCTGCATTCATGCAGGCAT+TGG 0.492416 7_1:-18027509 Msa1012680:CDS
TCCCTAACCGATTCGATGCA+CGG 0.492832 7_1:+18027439 None:intergenic
TCATGAAATCATTATCTGAA+TGG 0.494347 7_1:+18028978 None:intergenic
CCCTTCGAGTTCCACCCTGT+TGG 0.500773 7_1:-18027373 Msa1012680:CDS
GTGTCACTATGTTTGGTGCT+TGG 0.501545 7_1:+18027218 None:intergenic
CCGCCAAAGCCTCGCCTACA+CGG 0.501971 7_1:+18027311 None:intergenic
TAACTCTGTTAAGCATCGTC+CGG 0.502256 7_1:+18027414 None:intergenic
AGTGATATGTATCATCAAAT+GGG 0.505152 7_1:-18028494 Msa1012680:CDS
TACCTTCCCATCAAACCCTA+TGG 0.506323 7_1:-18027680 Msa1012680:CDS
TCCTGTGGAGTCAGCACCAA+GGG 0.507337 7_1:-18027092 Msa1012680:CDS
GGAAGATAATGGAAGGGAAA+GGG 0.523029 7_1:-18026970 Msa1012680:CDS
AGTTGGGCCGTGCATCGAAT+CGG 0.524300 7_1:-18027446 Msa1012680:CDS
GCCCTTGGTGCTGACTCCAC+AGG 0.524463 7_1:+18027091 None:intergenic
GCATTGGCTGCACGGCCCGG+CGG 0.530002 7_1:-18027493 Msa1012680:CDS
CCAATGGCCTGCATTCATGC+AGG 0.532300 7_1:-18027515 Msa1012680:CDS
TGCCAGGAACACGGTGGAGA+CGG 0.538538 7_1:+18027275 None:intergenic
AGAATCTCTAAGTGCAAGAC+TGG 0.538771 7_1:-18027788 Msa1012680:CDS
AGACAATTTGATAGATCTTG+AGG 0.539414 7_1:+18027653 None:intergenic
GGTAGATAAACATGATGAAG+AGG 0.540118 7_1:+18027699 None:intergenic
GGACTTCCATAGGGTTTGAT+GGG 0.540263 7_1:+18027674 None:intergenic
TAGATCTTGAGGACTTCCAT+AGG 0.542142 7_1:+18027664 None:intergenic
CTAATGCAGTGACTCAATCA+AGG 0.544135 7_1:-18026925 Msa1012680:CDS
TTGGGTTTGTATTCATGTGA+TGG 0.544918 7_1:-18026896 Msa1012680:CDS
CGGAACATCGTGGCATGTGA+AGG 0.545048 7_1:-18027034 Msa1012680:CDS
AAGGTTGTTTGTTGCTTGGG+TGG 0.550029 7_1:-18026853 Msa1012680:CDS
CAAACGCCTCGAAAATGGCT+TGG 0.554574 7_1:+18027587 None:intergenic
GAGCAAGAAGCAAGCCATAA+CGG 0.555779 7_1:-18027190 Msa1012680:CDS
GGAGTCAGCACCAAGGGCTA+AGG 0.557086 7_1:-18027086 Msa1012680:CDS
TCTAAGTCAAATTTGAGAGA+TGG 0.557349 7_1:+18029058 None:intergenic
GCCCAACTCCAGTGATCCTA+AGG 0.558573 7_1:+18027461 None:intergenic
AGATCTTGAGGACTTCCATA+GGG 0.558587 7_1:+18027665 None:intergenic
TGTAACTATAACTATGCTCA+AGG 0.559054 7_1:-18028896 Msa1012680:CDS
GGTAGCCTTGAAGGATATCA+AGG 0.560859 7_1:+18027536 None:intergenic
ATGGAAGGGAAAGGGTTCAA+AGG 0.562746 7_1:-18026962 Msa1012680:CDS
GGATATCAAGGTCGATGACA+TGG 0.564199 7_1:+18027548 None:intergenic
AGGTTCCCGAGATGATTGCC+AGG 0.564807 7_1:+18027259 None:intergenic
GATCTATCAAATTGTCTACC+AGG 0.565843 7_1:-18027647 Msa1012680:CDS
GCCGTGCATCGAATCGGTTA+GGG 0.568254 7_1:-18027440 Msa1012680:CDS
CCAACAGGGTGGAACTCGAA+GGG 0.569813 7_1:+18027373 None:intergenic
AAATGGAGGAAGATAATGGA+AGG 0.574690 7_1:-18026977 Msa1012680:CDS
GAGGTGGTGAACAACCTGAT+AGG 0.574741 7_1:+18028858 None:intergenic
CCATTATCGCTGCTTCTGCA+TGG 0.581952 7_1:-18026820 Msa1012680:CDS
ACATGAAGCTACTCTTTGCA+TGG 0.581987 7_1:+18027816 None:intergenic
ACACGGCGGTTAAACTTGTG+CGG 0.583986 7_1:+18027328 None:intergenic
CCTGCATGAATGCAGGCCAT+TGG 0.587372 7_1:+18027515 None:intergenic
GTGTTACTACTCTATTGAGC+TGG 0.588376 7_1:+18027851 None:intergenic
GTTTAACCGCCGTGTAGGCG+AGG 0.589782 7_1:-18027320 Msa1012680:CDS
GTGAATACATGCTAGCAAGA+AGG 0.591113 7_1:-18027882 Msa1012680:CDS
TCCAACAGGGTGGAACTCGA+AGG 0.593188 7_1:+18027372 None:intergenic
TGTGCTGAAGCAGTGGCAAA+AGG 0.593207 7_1:-18027904 Msa1012680:CDS
CTACTCTATTGAGCTGGTGT+AGG 0.595572 7_1:+18027857 None:intergenic
GAATTAAATACTCTATGAAG+TGG 0.597232 7_1:+18028773 None:intergenic
CCCTGTTGGAGAACAACTTG+AGG 0.601784 7_1:-18027359 Msa1012680:CDS
TCTAGCATGTGCTGAAGCAG+TGG 0.602572 7_1:-18027911 Msa1012680:CDS
CGAGATGATTGCCAGGAACA+CGG 0.603757 7_1:+18027266 None:intergenic
ATCACCAGATAGTTCAATGT+GGG 0.605621 7_1:-18029017 Msa1012680:CDS
ATATCCTTCAAGGCTACCAA+TGG 0.609017 7_1:-18027531 Msa1012680:CDS
AGAGGATAGAGAGACATGAG+AGG 0.611332 7_1:-18027006 Msa1012680:CDS
AGGAAGATAATGGAAGGGAA+AGG 0.613642 7_1:-18026971 Msa1012680:CDS
CATCGTGGCATGTGAAGGTG+AGG 0.614548 7_1:-18027029 Msa1012680:CDS
CTTTGCATGGAGTCACCTAG+TGG 0.624018 7_1:+18027829 None:intergenic
AGAGCAGTATATATTTGCAC+CGG 0.624565 7_1:-18027062 Msa1012680:CDS
TTCCTGTGGAGTCAGCACCA+AGG 0.627178 7_1:-18027093 Msa1012680:CDS
AATGGAGGAAGATAATGGAA+GGG 0.644464 7_1:-18026976 Msa1012680:CDS
ATTTGACTTAGATGGTGATG+TGG 0.646549 7_1:-18029047 Msa1012680:CDS
AATAGAGTAGTAACACCACT+AGG 0.648126 7_1:-18027844 Msa1012680:CDS
CCTCAAGTTGTTCTCCAACA+GGG 0.648235 7_1:+18027359 None:intergenic
CACAAGTTTAACCGCCGTGT+AGG 0.660698 7_1:-18027325 Msa1012680:CDS
GATGACGATGATAACGATGA+TGG 0.665670 7_1:+18027721 None:intergenic
ACTCCAGTGATCCTAAGGAA+CGG 0.672214 7_1:+18027466 None:intergenic
CAACAGGGTGGAACTCGAAG+GGG 0.673995 7_1:+18027374 None:intergenic
TGGCATGTGAAGGTGAGGAG+AGG 0.683443 7_1:-18027024 Msa1012680:CDS
ACCAAACATAGTGACACTTG+TGG 0.687522 7_1:-18027212 Msa1012680:CDS
TATATGTAGGAACAAGACAG+TGG 0.702151 7_1:-18027955 Msa1012680:intron
TTATTGTAAGTAGAAGCTTG+TGG 0.706364 7_1:+18028920 None:intergenic
CCAATTTGTGATGCAAAACG+AGG 0.711917 7_1:+18028839 None:intergenic
AATCACCAGATAGTTCAATG+TGG 0.716750 7_1:-18029018 Msa1012680:CDS
TGATGGTTACAGGTTAACTG+AGG 0.719493 7_1:-18026879 Msa1012680:CDS
CAAGTTGTTCTCCAACAGGG+TGG 0.720607 7_1:+18027362 None:intergenic
ATTTGTGATGCAAAACGAGG+TGG 0.735195 7_1:+18028842 None:intergenic
ACCGGAGATTCGGAACATCG+TGG 0.740006 7_1:-18027044 Msa1012680:CDS
GATGATTGCCAGGAACACGG+TGG 0.742020 7_1:+18027269 None:intergenic
CCAAAGCCTCGCCTACACGG+CGG 0.759718 7_1:+18027314 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGATTTAATTAAGATTTT+AGG + chr7_1:18027711-18027730 None:intergenic 10.0%
!!! TTTGATTTAATTAAGATTTT+AGG + chr7_1:18027711-18027730 None:intergenic 10.0%
!! TATGTTTATTTATTCAGTTA+GGG + chr7_1:18027741-18027760 None:intergenic 15.0%
!! TTATGTTTATTTATTCAGTT+AGG + chr7_1:18027742-18027761 None:intergenic 15.0%
!! TTAGAAAAATTGCTAATAAA+TGG + chr7_1:18027780-18027799 None:intergenic 15.0%
!! TTAAATAGTTAATACAGAAA+TGG + chr7_1:18027951-18027970 None:intergenic 15.0%
!! TATGTTTATTTATTCAGTTA+GGG + chr7_1:18027741-18027760 None:intergenic 15.0%
!! TTATGTTTATTTATTCAGTT+AGG + chr7_1:18027742-18027761 None:intergenic 15.0%
!! TTAGAAAAATTGCTAATAAA+TGG + chr7_1:18027780-18027799 None:intergenic 15.0%
!! TTAAATAGTTAATACAGAAA+TGG + chr7_1:18027951-18027970 None:intergenic 15.0%
!!! TTTGTTTGATTTGAAGAATT+GGG + chr7_1:18026868-18026887 None:intergenic 20.0%
!!! ATTTGTTTGATTTGAAGAAT+TGG + chr7_1:18026869-18026888 None:intergenic 20.0%
!! AATAGTAATAACCAACAAAA+AGG - chr7_1:18027219-18027238 Msa1012680:CDS 20.0%
!! ATAGTAATAACCAACAAAAA+GGG - chr7_1:18027220-18027239 Msa1012680:CDS 20.0%
!!! TGTTGCATATATTGATTATT+TGG + chr7_1:18027282-18027301 None:intergenic 20.0%
!! GCTATATATCTAATATATGT+AGG - chr7_1:18028060-18028079 Msa1012680:intron 20.0%
!!! TTTGTTTGATTTGAAGAATT+GGG + chr7_1:18026868-18026887 None:intergenic 20.0%
!!! ATTTGTTTGATTTGAAGAAT+TGG + chr7_1:18026869-18026888 None:intergenic 20.0%
!! AATAGTAATAACCAACAAAA+AGG - chr7_1:18027219-18027238 Msa1012680:CDS 20.0%
!! ATAGTAATAACCAACAAAAA+GGG - chr7_1:18027220-18027239 Msa1012680:CDS 20.0%
!!! TGTTGCATATATTGATTATT+TGG + chr7_1:18027282-18027301 None:intergenic 20.0%
!! GCTATATATCTAATATATGT+AGG - chr7_1:18028060-18028079 Msa1012680:intron 20.0%
! TCATGAAATCATTATCTGAA+TGG + chr7_1:18027053-18027072 None:intergenic 25.0%
!! TTAGGGTTAATGTTTCTAAT+TGG + chr7_1:18027084-18027103 None:intergenic 25.0%
! GAATTAAATACTCTATGAAG+TGG + chr7_1:18027258-18027277 None:intergenic 25.0%
!! AACTCCAATATCAACAATTT+TGG - chr7_1:18027410-18027429 Msa1012680:CDS 25.0%
! CTATCCAAAATTGTTGATAT+TGG + chr7_1:18027417-18027436 None:intergenic 25.0%
! AGTGATATGTATCATCAAAT+GGG - chr7_1:18027534-18027553 Msa1012680:CDS 25.0%
!!! TTTTAGGTGAAGAAAGAAAA+AGG + chr7_1:18027695-18027714 None:intergenic 25.0%
! TTTATTTATTCAGTTAGGGA+AGG + chr7_1:18027737-18027756 None:intergenic 25.0%
! ATAGTTAATACAGAAATGGA+AGG + chr7_1:18027947-18027966 None:intergenic 25.0%
!! AGTGTGCAAATTTTATGTAA+GGG + chr7_1:18028411-18028430 None:intergenic 25.0%
!! AAGTGTGCAAATTTTATGTA+AGG + chr7_1:18028412-18028431 None:intergenic 25.0%
! ACTCAATCAAGGATATTATT+GGG - chr7_1:18029114-18029133 Msa1012680:CDS 25.0%
! TCATGAAATCATTATCTGAA+TGG + chr7_1:18027053-18027072 None:intergenic 25.0%
!! TTAGGGTTAATGTTTCTAAT+TGG + chr7_1:18027084-18027103 None:intergenic 25.0%
! GAATTAAATACTCTATGAAG+TGG + chr7_1:18027258-18027277 None:intergenic 25.0%
!! AACTCCAATATCAACAATTT+TGG - chr7_1:18027410-18027429 Msa1012680:CDS 25.0%
! CTATCCAAAATTGTTGATAT+TGG + chr7_1:18027417-18027436 None:intergenic 25.0%
! AGTGATATGTATCATCAAAT+GGG - chr7_1:18027534-18027553 Msa1012680:CDS 25.0%
!!! TTTTAGGTGAAGAAAGAAAA+AGG + chr7_1:18027695-18027714 None:intergenic 25.0%
! TTTATTTATTCAGTTAGGGA+AGG + chr7_1:18027737-18027756 None:intergenic 25.0%
! ATAGTTAATACAGAAATGGA+AGG + chr7_1:18027947-18027966 None:intergenic 25.0%
!! AGTGTGCAAATTTTATGTAA+GGG + chr7_1:18028411-18028430 None:intergenic 25.0%
!! AAGTGTGCAAATTTTATGTA+AGG + chr7_1:18028412-18028431 None:intergenic 25.0%
! ACTCAATCAAGGATATTATT+GGG - chr7_1:18029114-18029133 Msa1012680:CDS 25.0%
AAAAATGCCACAAATTCTTG+TGG - chr7_1:18026901-18026920 Msa1012680:CDS 30.0%
TAAATCACCACAAGAATTTG+TGG + chr7_1:18026911-18026930 None:intergenic 30.0%
ATTTGAGAGATGGTAAGTTT+AGG + chr7_1:18026963-18026982 None:intergenic 30.0%
TCTAAGTCAAATTTGAGAGA+TGG + chr7_1:18026973-18026992 None:intergenic 30.0%
! TCTCTCAAATTTGACTTAGA+TGG - chr7_1:18026973-18026992 Msa1012680:CDS 30.0%
TTATTGTAAGTAGAAGCTTG+TGG + chr7_1:18027111-18027130 None:intergenic 30.0%
TGTAACTATAACTATGCTCA+AGG - chr7_1:18027132-18027151 Msa1012680:CDS 30.0%
AATAACCAACAAAAAGGGAA+AGG - chr7_1:18027225-18027244 Msa1012680:CDS 30.0%
!! TGATCACTTTTCATCAACAA+AGG - chr7_1:18027362-18027381 Msa1012680:CDS 30.0%
!!! TTCTTCTGAATGTTTTGACA+TGG - chr7_1:18027386-18027405 Msa1012680:CDS 30.0%
CAAAATTCTTCAAGCTATTG+TGG - chr7_1:18027447-18027466 Msa1012680:CDS 30.0%
! GAAGAATCTACTATTTTGCA+TGG - chr7_1:18027480-18027499 Msa1012680:CDS 30.0%
GAGTGATATGTATCATCAAA+TGG - chr7_1:18027533-18027552 Msa1012680:CDS 30.0%
TACATCCAAAAAGAGTTCAT+AGG - chr7_1:18027823-18027842 Msa1012680:CDS 30.0%
ACATCCAAAAAGAGTTCATA+GGG - chr7_1:18027824-18027843 Msa1012680:CDS 30.0%
TATGATATTGGCATCCAAAA+AGG - chr7_1:18027893-18027912 Msa1012680:CDS 30.0%
AGACAATTTGATAGATCTTG+AGG + chr7_1:18028378-18028397 None:intergenic 30.0%
GACTCAATCAAGGATATTAT+TGG - chr7_1:18029113-18029132 Msa1012680:CDS 30.0%
! ATAAAGGTTGTTTGTTGCTT+GGG - chr7_1:18029172-18029191 Msa1012680:CDS 30.0%
AAAAATGCCACAAATTCTTG+TGG - chr7_1:18026901-18026920 Msa1012680:CDS 30.0%
TAAATCACCACAAGAATTTG+TGG + chr7_1:18026911-18026930 None:intergenic 30.0%
ATTTGAGAGATGGTAAGTTT+AGG + chr7_1:18026963-18026982 None:intergenic 30.0%
TCTAAGTCAAATTTGAGAGA+TGG + chr7_1:18026973-18026992 None:intergenic 30.0%
! TCTCTCAAATTTGACTTAGA+TGG - chr7_1:18026973-18026992 Msa1012680:CDS 30.0%
TTATTGTAAGTAGAAGCTTG+TGG + chr7_1:18027111-18027130 None:intergenic 30.0%
TGTAACTATAACTATGCTCA+AGG - chr7_1:18027132-18027151 Msa1012680:CDS 30.0%
AATAACCAACAAAAAGGGAA+AGG - chr7_1:18027225-18027244 Msa1012680:CDS 30.0%
!! TGATCACTTTTCATCAACAA+AGG - chr7_1:18027362-18027381 Msa1012680:CDS 30.0%
!!! TTCTTCTGAATGTTTTGACA+TGG - chr7_1:18027386-18027405 Msa1012680:CDS 30.0%
CAAAATTCTTCAAGCTATTG+TGG - chr7_1:18027447-18027466 Msa1012680:CDS 30.0%
! GAAGAATCTACTATTTTGCA+TGG - chr7_1:18027480-18027499 Msa1012680:CDS 30.0%
GAGTGATATGTATCATCAAA+TGG - chr7_1:18027533-18027552 Msa1012680:CDS 30.0%
TACATCCAAAAAGAGTTCAT+AGG - chr7_1:18027823-18027842 Msa1012680:CDS 30.0%
ACATCCAAAAAGAGTTCATA+GGG - chr7_1:18027824-18027843 Msa1012680:CDS 30.0%
TATGATATTGGCATCCAAAA+AGG - chr7_1:18027893-18027912 Msa1012680:CDS 30.0%
AGACAATTTGATAGATCTTG+AGG + chr7_1:18028378-18028397 None:intergenic 30.0%
GACTCAATCAAGGATATTAT+TGG - chr7_1:18029113-18029132 Msa1012680:CDS 30.0%
! ATAAAGGTTGTTTGTTGCTT+GGG - chr7_1:18029172-18029191 Msa1012680:CDS 30.0%
! ATTTGACTTAGATGGTGATG+TGG - chr7_1:18026981-18027000 Msa1012680:CDS 35.0%
ACATTGAACTATCTGGTGAT+TGG + chr7_1:18027011-18027030 None:intergenic 35.0%
AATCACCAGATAGTTCAATG+TGG - chr7_1:18027010-18027029 Msa1012680:CDS 35.0%
ATCACCAGATAGTTCAATGT+GGG - chr7_1:18027011-18027030 Msa1012680:CDS 35.0%
TAGAAGCTTGTGGTGAATTA+GGG + chr7_1:18027101-18027120 None:intergenic 35.0%
ATGCAAATTCAAAGCCTATC+AGG - chr7_1:18027156-18027175 Msa1012680:CDS 35.0%
! TAAGTCCTTTCCCTTTTTGT+TGG + chr7_1:18027233-18027252 None:intergenic 35.0%
! GAGTTCTTGGAAGATTTTCA+AGG - chr7_1:18027333-18027352 Msa1012680:CDS 35.0%
! GAATCTACTATTTTGCATGG+TGG - chr7_1:18027483-18027502 Msa1012680:CDS 35.0%
GTATCATCAAATGGGATCTA+TGG - chr7_1:18027542-18027561 Msa1012680:CDS 35.0%
! GCATCTTTTGATGTTTCTCT+TGG + chr7_1:18027608-18027627 None:intergenic 35.0%
CTAACAGTTCCTATTCCAAT+TGG - chr7_1:18027645-18027664 Msa1012680:CDS 35.0%
TGCTCAATTCCAATTGGAAT+AGG + chr7_1:18027657-18027676 None:intergenic 35.0%
TATTCCAATTGGAATTGAGC+AGG - chr7_1:18027656-18027675 Msa1012680:CDS 35.0%
ATTACCTGCTCAATTCCAAT+TGG + chr7_1:18027663-18027682 None:intergenic 35.0%
! ATGACCCTATGAACTCTTTT+TGG + chr7_1:18027831-18027850 None:intergenic 35.0%
GGACGTCGTATTTATGATAT+TGG - chr7_1:18027881-18027900 Msa1012680:CDS 35.0%
TATATGTAGGAACAAGACAG+TGG - chr7_1:18028073-18028092 Msa1012680:intron 35.0%
AATAGAGTAGTAACACCACT+AGG - chr7_1:18028184-18028203 Msa1012680:intron 35.0%
!! TGATGATGACTTGGTTGTTA+GGG + chr7_1:18028272-18028291 None:intergenic 35.0%
!! TTGATGATGACTTGGTTGTT+AGG + chr7_1:18028273-18028292 None:intergenic 35.0%
!!! CTTTTTGGTTGATGATGACT+TGG + chr7_1:18028281-18028300 None:intergenic 35.0%
!! CGATGATGGTGTTAACTTTT+TGG + chr7_1:18028296-18028315 None:intergenic 35.0%
GGTAGATAAACATGATGAAG+AGG + chr7_1:18028332-18028351 None:intergenic 35.0%
GATCTATCAAATTGTCTACC+AGG - chr7_1:18028381-18028400 Msa1012680:CDS 35.0%
AGAGCAGTATATATTTGCAC+CGG - chr7_1:18028966-18028985 Msa1012680:CDS 35.0%
ATATATTTGCACCGGAGATT+CGG - chr7_1:18028974-18028993 Msa1012680:CDS 35.0%
!! AAATGGAGGAAGATAATGGA+AGG - chr7_1:18029051-18029070 Msa1012680:CDS 35.0%
!! AATGGAGGAAGATAATGGAA+GGG - chr7_1:18029052-18029071 Msa1012680:CDS 35.0%
TTGGGTTTGTATTCATGTGA+TGG - chr7_1:18029132-18029151 Msa1012680:CDS 35.0%
TGTATTCATGTGATGGTTAC+AGG - chr7_1:18029139-18029158 Msa1012680:CDS 35.0%
TACAGGTTAACTGAGGATAA+AGG - chr7_1:18029156-18029175 Msa1012680:CDS 35.0%
! GATAAAGGTTGTTTGTTGCT+TGG - chr7_1:18029171-18029190 Msa1012680:CDS 35.0%
! ATTTGACTTAGATGGTGATG+TGG - chr7_1:18026981-18027000 Msa1012680:CDS 35.0%
ACATTGAACTATCTGGTGAT+TGG + chr7_1:18027011-18027030 None:intergenic 35.0%
AATCACCAGATAGTTCAATG+TGG - chr7_1:18027010-18027029 Msa1012680:CDS 35.0%
ATCACCAGATAGTTCAATGT+GGG - chr7_1:18027011-18027030 Msa1012680:CDS 35.0%
TAGAAGCTTGTGGTGAATTA+GGG + chr7_1:18027101-18027120 None:intergenic 35.0%
ATGCAAATTCAAAGCCTATC+AGG - chr7_1:18027156-18027175 Msa1012680:CDS 35.0%
! TAAGTCCTTTCCCTTTTTGT+TGG + chr7_1:18027233-18027252 None:intergenic 35.0%
! GAGTTCTTGGAAGATTTTCA+AGG - chr7_1:18027333-18027352 Msa1012680:CDS 35.0%
! GAATCTACTATTTTGCATGG+TGG - chr7_1:18027483-18027502 Msa1012680:CDS 35.0%
GTATCATCAAATGGGATCTA+TGG - chr7_1:18027542-18027561 Msa1012680:CDS 35.0%
! GCATCTTTTGATGTTTCTCT+TGG + chr7_1:18027608-18027627 None:intergenic 35.0%
CTAACAGTTCCTATTCCAAT+TGG - chr7_1:18027645-18027664 Msa1012680:CDS 35.0%
TGCTCAATTCCAATTGGAAT+AGG + chr7_1:18027657-18027676 None:intergenic 35.0%
TATTCCAATTGGAATTGAGC+AGG - chr7_1:18027656-18027675 Msa1012680:CDS 35.0%
ATTACCTGCTCAATTCCAAT+TGG + chr7_1:18027663-18027682 None:intergenic 35.0%
! ATGACCCTATGAACTCTTTT+TGG + chr7_1:18027831-18027850 None:intergenic 35.0%
GGACGTCGTATTTATGATAT+TGG - chr7_1:18027881-18027900 Msa1012680:CDS 35.0%
TATATGTAGGAACAAGACAG+TGG - chr7_1:18028073-18028092 Msa1012680:intron 35.0%
AATAGAGTAGTAACACCACT+AGG - chr7_1:18028184-18028203 Msa1012680:intron 35.0%
!! TGATGATGACTTGGTTGTTA+GGG + chr7_1:18028272-18028291 None:intergenic 35.0%
!! TTGATGATGACTTGGTTGTT+AGG + chr7_1:18028273-18028292 None:intergenic 35.0%
!!! CTTTTTGGTTGATGATGACT+TGG + chr7_1:18028281-18028300 None:intergenic 35.0%
!! CGATGATGGTGTTAACTTTT+TGG + chr7_1:18028296-18028315 None:intergenic 35.0%
GGTAGATAAACATGATGAAG+AGG + chr7_1:18028332-18028351 None:intergenic 35.0%
GATCTATCAAATTGTCTACC+AGG - chr7_1:18028381-18028400 Msa1012680:CDS 35.0%
AGAGCAGTATATATTTGCAC+CGG - chr7_1:18028966-18028985 Msa1012680:CDS 35.0%
ATATATTTGCACCGGAGATT+CGG - chr7_1:18028974-18028993 Msa1012680:CDS 35.0%
!! AAATGGAGGAAGATAATGGA+AGG - chr7_1:18029051-18029070 Msa1012680:CDS 35.0%
!! AATGGAGGAAGATAATGGAA+GGG - chr7_1:18029052-18029071 Msa1012680:CDS 35.0%
TTGGGTTTGTATTCATGTGA+TGG - chr7_1:18029132-18029151 Msa1012680:CDS 35.0%
TGTATTCATGTGATGGTTAC+AGG - chr7_1:18029139-18029158 Msa1012680:CDS 35.0%
TACAGGTTAACTGAGGATAA+AGG - chr7_1:18029156-18029175 Msa1012680:CDS 35.0%
! GATAAAGGTTGTTTGTTGCT+TGG - chr7_1:18029171-18029190 Msa1012680:CDS 35.0%
GATGGTAAGTTTAGGCTTTG+TGG + chr7_1:18026955-18026974 None:intergenic 40.0%
GTAGAAGCTTGTGGTGAATT+AGG + chr7_1:18027102-18027121 None:intergenic 40.0%
ATTTGTGATGCAAAACGAGG+TGG + chr7_1:18027189-18027208 None:intergenic 40.0%
CCAATTTGTGATGCAAAACG+AGG + chr7_1:18027192-18027211 None:intergenic 40.0%
! CCTCGTTTTGCATCACAAAT+TGG - chr7_1:18027189-18027208 Msa1012680:CDS 40.0%
TCCAAGAACTCTTCAATAGC+TGG + chr7_1:18027324-18027343 None:intergenic 40.0%
CACAAGCTTTACAGCAAGAA+AGG - chr7_1:18027580-18027599 Msa1012680:CDS 40.0%
TGTTGCGTCTTCTATGTCTA+TGG - chr7_1:18027860-18027879 Msa1012680:CDS 40.0%
GTGAATACATGCTAGCAAGA+AGG - chr7_1:18028146-18028165 Msa1012680:intron 40.0%
! GTGTTACTACTCTATTGAGC+TGG + chr7_1:18028180-18028199 None:intergenic 40.0%
ACATGAAGCTACTCTTTGCA+TGG + chr7_1:18028215-18028234 None:intergenic 40.0%
AGAATCTCTAAGTGCAAGAC+TGG - chr7_1:18028240-18028259 Msa1012680:intron 40.0%
! GATGACGATGATAACGATGA+TGG + chr7_1:18028310-18028329 None:intergenic 40.0%
AGATCTTGAGGACTTCCATA+GGG + chr7_1:18028366-18028385 None:intergenic 40.0%
TAGATCTTGAGGACTTCCAT+AGG + chr7_1:18028367-18028386 None:intergenic 40.0%
! ATTTTATGTAAGGGCAAGCC+TGG + chr7_1:18028402-18028421 None:intergenic 40.0%
ATCGACCTTGATATCCTTCA+AGG - chr7_1:18028487-18028506 Msa1012680:CDS 40.0%
ATATCCTTCAAGGCTACCAA+TGG - chr7_1:18028497-18028516 Msa1012680:CDS 40.0%
! TAACTCTGTTAAGCATCGTC+CGG + chr7_1:18028617-18028636 None:intergenic 40.0%
GGTCTCTTATCATGGATAAC+AGG + chr7_1:18028792-18028811 None:intergenic 40.0%
ACCAAACATAGTGACACTTG+TGG - chr7_1:18028816-18028835 Msa1012680:CDS 40.0%
! TCCACAAGTGTCACTATGTT+TGG + chr7_1:18028820-18028839 None:intergenic 40.0%
AGAAATCGGCCCAAAAAGTA+CGG + chr7_1:18028865-18028884 None:intergenic 40.0%
AATGCAAAGCCTCGAGAAAT+CGG + chr7_1:18028879-18028898 None:intergenic 40.0%
GGAGAAATGGAGGAAGATAA+TGG - chr7_1:18029047-18029066 Msa1012680:CDS 40.0%
!! AGGAAGATAATGGAAGGGAA+AGG - chr7_1:18029057-18029076 Msa1012680:CDS 40.0%
!! GGAAGATAATGGAAGGGAAA+GGG - chr7_1:18029058-18029077 Msa1012680:CDS 40.0%
CTTGATTGAGTCACTGCATT+AGG + chr7_1:18029105-18029124 None:intergenic 40.0%
CTAATGCAGTGACTCAATCA+AGG - chr7_1:18029103-18029122 Msa1012680:CDS 40.0%
TGATGGTTACAGGTTAACTG+AGG - chr7_1:18029149-18029168 Msa1012680:CDS 40.0%
GATGGTAAGTTTAGGCTTTG+TGG + chr7_1:18026955-18026974 None:intergenic 40.0%
GTAGAAGCTTGTGGTGAATT+AGG + chr7_1:18027102-18027121 None:intergenic 40.0%
ATTTGTGATGCAAAACGAGG+TGG + chr7_1:18027189-18027208 None:intergenic 40.0%
CCAATTTGTGATGCAAAACG+AGG + chr7_1:18027192-18027211 None:intergenic 40.0%
! CCTCGTTTTGCATCACAAAT+TGG - chr7_1:18027189-18027208 Msa1012680:CDS 40.0%
TCCAAGAACTCTTCAATAGC+TGG + chr7_1:18027324-18027343 None:intergenic 40.0%
CACAAGCTTTACAGCAAGAA+AGG - chr7_1:18027580-18027599 Msa1012680:CDS 40.0%
TGTTGCGTCTTCTATGTCTA+TGG - chr7_1:18027860-18027879 Msa1012680:CDS 40.0%
GTGAATACATGCTAGCAAGA+AGG - chr7_1:18028146-18028165 Msa1012680:intron 40.0%
! GTGTTACTACTCTATTGAGC+TGG + chr7_1:18028180-18028199 None:intergenic 40.0%
ACATGAAGCTACTCTTTGCA+TGG + chr7_1:18028215-18028234 None:intergenic 40.0%
AGAATCTCTAAGTGCAAGAC+TGG - chr7_1:18028240-18028259 Msa1012680:intron 40.0%
! GATGACGATGATAACGATGA+TGG + chr7_1:18028310-18028329 None:intergenic 40.0%
AGATCTTGAGGACTTCCATA+GGG + chr7_1:18028366-18028385 None:intergenic 40.0%
TAGATCTTGAGGACTTCCAT+AGG + chr7_1:18028367-18028386 None:intergenic 40.0%
! ATTTTATGTAAGGGCAAGCC+TGG + chr7_1:18028402-18028421 None:intergenic 40.0%
ATCGACCTTGATATCCTTCA+AGG - chr7_1:18028487-18028506 Msa1012680:CDS 40.0%
ATATCCTTCAAGGCTACCAA+TGG - chr7_1:18028497-18028516 Msa1012680:CDS 40.0%
! TAACTCTGTTAAGCATCGTC+CGG + chr7_1:18028617-18028636 None:intergenic 40.0%
GGTCTCTTATCATGGATAAC+AGG + chr7_1:18028792-18028811 None:intergenic 40.0%
ACCAAACATAGTGACACTTG+TGG - chr7_1:18028816-18028835 Msa1012680:CDS 40.0%
! TCCACAAGTGTCACTATGTT+TGG + chr7_1:18028820-18028839 None:intergenic 40.0%
AGAAATCGGCCCAAAAAGTA+CGG + chr7_1:18028865-18028884 None:intergenic 40.0%
AATGCAAAGCCTCGAGAAAT+CGG + chr7_1:18028879-18028898 None:intergenic 40.0%
GGAGAAATGGAGGAAGATAA+TGG - chr7_1:18029047-18029066 Msa1012680:CDS 40.0%
!! AGGAAGATAATGGAAGGGAA+AGG - chr7_1:18029057-18029076 Msa1012680:CDS 40.0%
!! GGAAGATAATGGAAGGGAAA+GGG - chr7_1:18029058-18029077 Msa1012680:CDS 40.0%
CTTGATTGAGTCACTGCATT+AGG + chr7_1:18029105-18029124 None:intergenic 40.0%
CTAATGCAGTGACTCAATCA+AGG - chr7_1:18029103-18029122 Msa1012680:CDS 40.0%
TGATGGTTACAGGTTAACTG+AGG - chr7_1:18029149-18029168 Msa1012680:CDS 40.0%
GCTTCCCACATTGAACTATC+TGG + chr7_1:18027018-18027037 None:intergenic 45.0%
GCCAGCTATTGAAGAGTTCT+TGG - chr7_1:18027320-18027339 Msa1012680:CDS 45.0%
TGGCATCCAAAAAGGAACAG+CGG - chr7_1:18027901-18027920 Msa1012680:CDS 45.0%
CTACTCTATTGAGCTGGTGT+AGG + chr7_1:18028174-18028193 None:intergenic 45.0%
TACCTTCCCATCAAACCCTA+TGG - chr7_1:18028348-18028367 Msa1012680:intron 45.0%
TTCCATAGGGTTTGATGGGA+AGG + chr7_1:18028353-18028372 None:intergenic 45.0%
GGACTTCCATAGGGTTTGAT+GGG + chr7_1:18028357-18028376 None:intergenic 45.0%
AGGACTTCCATAGGGTTTGA+TGG + chr7_1:18028358-18028377 None:intergenic 45.0%
!! CTCGAAAATGGCTTGGTTAG+CGG + chr7_1:18028437-18028456 None:intergenic 45.0%
GGATATCAAGGTCGATGACA+TGG + chr7_1:18028483-18028502 None:intergenic 45.0%
! GGTAGCCTTGAAGGATATCA+AGG + chr7_1:18028495-18028514 None:intergenic 45.0%
ACTCCAGTGATCCTAAGGAA+CGG + chr7_1:18028565-18028584 None:intergenic 45.0%
TTCCTTAGGATCACTGGAGT+TGG - chr7_1:18028565-18028584 Msa1012680:CDS 45.0%
TCCTTAGGATCACTGGAGTT+GGG - chr7_1:18028566-18028585 Msa1012680:CDS 45.0%
ATCGAATCGGTTAGGGAAAC+CGG - chr7_1:18028595-18028614 Msa1012680:CDS 45.0%
! CCTCAAGTTGTTCTCCAACA+GGG + chr7_1:18028672-18028691 None:intergenic 45.0%
! TCCTCAAGTTGTTCTCCAAC+AGG + chr7_1:18028673-18028692 None:intergenic 45.0%
TGGTGCTTGGTCTCTTATCA+TGG + chr7_1:18028800-18028819 None:intergenic 45.0%
!! GTGTCACTATGTTTGGTGCT+TGG + chr7_1:18028813-18028832 None:intergenic 45.0%
GAGCAAGAAGCAAGCCATAA+CGG - chr7_1:18028838-18028857 Msa1012680:CDS 45.0%
AGCAAGAAGCAAGCCATAAC+GGG - chr7_1:18028839-18028858 Msa1012680:CDS 45.0%
!!! CATAACGGGCCGTACTTTTT+GGG - chr7_1:18028853-18028872 Msa1012680:CDS 45.0%
CGAGGCTTTGCATTACTACT+CGG - chr7_1:18028885-18028904 Msa1012680:CDS 45.0%
! CTCGGCAATTTTCGACTCTT+TGG - chr7_1:18028903-18028922 Msa1012680:CDS 45.0%
!!! TTTGGACGCTACTTTTCCTG+TGG - chr7_1:18028921-18028940 Msa1012680:CDS 45.0%
AGAGGATAGAGAGACATGAG+AGG - chr7_1:18029022-18029041 Msa1012680:CDS 45.0%
GATAGAGAGACATGAGAGGT+TGG - chr7_1:18029026-18029045 Msa1012680:CDS 45.0%
GACATGAGAGGTTGGAGAAA+TGG - chr7_1:18029034-18029053 Msa1012680:CDS 45.0%
ATGAGAGGTTGGAGAAATGG+AGG - chr7_1:18029037-18029056 Msa1012680:CDS 45.0%
ATGGAAGGGAAAGGGTTCAA+AGG - chr7_1:18029066-18029085 Msa1012680:CDS 45.0%
GTCACTGCATTAGGACTTAG+AGG + chr7_1:18029096-18029115 None:intergenic 45.0%
! AAGGTTGTTTGTTGCTTGGG+TGG - chr7_1:18029175-18029194 Msa1012680:CDS 45.0%
GCTTCCCACATTGAACTATC+TGG + chr7_1:18027018-18027037 None:intergenic 45.0%
GCCAGCTATTGAAGAGTTCT+TGG - chr7_1:18027320-18027339 Msa1012680:CDS 45.0%
TGGCATCCAAAAAGGAACAG+CGG - chr7_1:18027901-18027920 Msa1012680:CDS 45.0%
CTACTCTATTGAGCTGGTGT+AGG + chr7_1:18028174-18028193 None:intergenic 45.0%
TACCTTCCCATCAAACCCTA+TGG - chr7_1:18028348-18028367 Msa1012680:intron 45.0%
TTCCATAGGGTTTGATGGGA+AGG + chr7_1:18028353-18028372 None:intergenic 45.0%
GGACTTCCATAGGGTTTGAT+GGG + chr7_1:18028357-18028376 None:intergenic 45.0%
AGGACTTCCATAGGGTTTGA+TGG + chr7_1:18028358-18028377 None:intergenic 45.0%
!! CTCGAAAATGGCTTGGTTAG+CGG + chr7_1:18028437-18028456 None:intergenic 45.0%
GGATATCAAGGTCGATGACA+TGG + chr7_1:18028483-18028502 None:intergenic 45.0%
! GGTAGCCTTGAAGGATATCA+AGG + chr7_1:18028495-18028514 None:intergenic 45.0%
ACTCCAGTGATCCTAAGGAA+CGG + chr7_1:18028565-18028584 None:intergenic 45.0%
TTCCTTAGGATCACTGGAGT+TGG - chr7_1:18028565-18028584 Msa1012680:CDS 45.0%
TCCTTAGGATCACTGGAGTT+GGG - chr7_1:18028566-18028585 Msa1012680:CDS 45.0%
ATCGAATCGGTTAGGGAAAC+CGG - chr7_1:18028595-18028614 Msa1012680:CDS 45.0%
! CCTCAAGTTGTTCTCCAACA+GGG + chr7_1:18028672-18028691 None:intergenic 45.0%
! TCCTCAAGTTGTTCTCCAAC+AGG + chr7_1:18028673-18028692 None:intergenic 45.0%
TGGTGCTTGGTCTCTTATCA+TGG + chr7_1:18028800-18028819 None:intergenic 45.0%
!! GTGTCACTATGTTTGGTGCT+TGG + chr7_1:18028813-18028832 None:intergenic 45.0%
GAGCAAGAAGCAAGCCATAA+CGG - chr7_1:18028838-18028857 Msa1012680:CDS 45.0%
AGCAAGAAGCAAGCCATAAC+GGG - chr7_1:18028839-18028858 Msa1012680:CDS 45.0%
!!! CATAACGGGCCGTACTTTTT+GGG - chr7_1:18028853-18028872 Msa1012680:CDS 45.0%
CGAGGCTTTGCATTACTACT+CGG - chr7_1:18028885-18028904 Msa1012680:CDS 45.0%
! CTCGGCAATTTTCGACTCTT+TGG - chr7_1:18028903-18028922 Msa1012680:CDS 45.0%
!!! TTTGGACGCTACTTTTCCTG+TGG - chr7_1:18028921-18028940 Msa1012680:CDS 45.0%
AGAGGATAGAGAGACATGAG+AGG - chr7_1:18029022-18029041 Msa1012680:CDS 45.0%
GATAGAGAGACATGAGAGGT+TGG - chr7_1:18029026-18029045 Msa1012680:CDS 45.0%
GACATGAGAGGTTGGAGAAA+TGG - chr7_1:18029034-18029053 Msa1012680:CDS 45.0%
ATGAGAGGTTGGAGAAATGG+AGG - chr7_1:18029037-18029056 Msa1012680:CDS 45.0%
ATGGAAGGGAAAGGGTTCAA+AGG - chr7_1:18029066-18029085 Msa1012680:CDS 45.0%
GTCACTGCATTAGGACTTAG+AGG + chr7_1:18029096-18029115 None:intergenic 45.0%
! AAGGTTGTTTGTTGCTTGGG+TGG - chr7_1:18029175-18029194 Msa1012680:CDS 45.0%
GAGGTGGTGAACAACCTGAT+AGG + chr7_1:18027173-18027192 None:intergenic 50.0%
TCTAGCATGTGCTGAAGCAG+TGG - chr7_1:18028117-18028136 Msa1012680:intron 50.0%
TGTGCTGAAGCAGTGGCAAA+AGG - chr7_1:18028124-18028143 Msa1012680:intron 50.0%
CTTTGCATGGAGTCACCTAG+TGG + chr7_1:18028202-18028221 None:intergenic 50.0%
!! CGCTAACCAAGCCATTTTCG+AGG - chr7_1:18028435-18028454 Msa1012680:CDS 50.0%
CAAACGCCTCGAAAATGGCT+TGG + chr7_1:18028444-18028463 None:intergenic 50.0%
!! AGCCATTTTCGAGGCGTTTG+AGG - chr7_1:18028444-18028463 Msa1012680:CDS 50.0%
TGCCTCAAACGCCTCGAAAA+TGG + chr7_1:18028449-18028468 None:intergenic 50.0%
!! TCCCTAACCGATTCGATGCA+CGG + chr7_1:18028592-18028611 None:intergenic 50.0%
CAAGTTGTTCTCCAACAGGG+TGG + chr7_1:18028669-18028688 None:intergenic 50.0%
CCCTGTTGGAGAACAACTTG+AGG - chr7_1:18028669-18028688 Msa1012680:CDS 50.0%
ACACGGCGGTTAAACTTGTG+CGG + chr7_1:18028703-18028722 None:intergenic 50.0%
CACAAGTTTAACCGCCGTGT+AGG - chr7_1:18028703-18028722 Msa1012680:CDS 50.0%
AACACGGTGGAGACGGTTAA+CGG + chr7_1:18028749-18028768 None:intergenic 50.0%
CGAGATGATTGCCAGGAACA+CGG + chr7_1:18028765-18028784 None:intergenic 50.0%
CGTGTTCCTGGCAATCATCT+CGG - chr7_1:18028763-18028782 Msa1012680:CDS 50.0%
GTGTTCCTGGCAATCATCTC+GGG - chr7_1:18028764-18028783 Msa1012680:CDS 50.0%
! CCAAAAAGTACGGCCCGTTA+TGG + chr7_1:18028855-18028874 None:intergenic 50.0%
!!! CCATAACGGGCCGTACTTTT+TGG - chr7_1:18028852-18028871 Msa1012680:CDS 50.0%
!! CTTTTTGGGCCGATTTCTCG+AGG - chr7_1:18028867-18028886 Msa1012680:CDS 50.0%
TACTGCTCTACCTTAGCCCT+TGG + chr7_1:18028955-18028974 None:intergenic 50.0%
CCATGCAGAAGCAGCGATAA+TGG + chr7_1:18029211-18029230 None:intergenic 50.0%
CCATTATCGCTGCTTCTGCA+TGG - chr7_1:18029208-18029227 Msa1012680:CDS 50.0%
GAGGTGGTGAACAACCTGAT+AGG + chr7_1:18027173-18027192 None:intergenic 50.0%
TCTAGCATGTGCTGAAGCAG+TGG - chr7_1:18028117-18028136 Msa1012680:intron 50.0%
TGTGCTGAAGCAGTGGCAAA+AGG - chr7_1:18028124-18028143 Msa1012680:intron 50.0%
CTTTGCATGGAGTCACCTAG+TGG + chr7_1:18028202-18028221 None:intergenic 50.0%
!! CGCTAACCAAGCCATTTTCG+AGG - chr7_1:18028435-18028454 Msa1012680:CDS 50.0%
CAAACGCCTCGAAAATGGCT+TGG + chr7_1:18028444-18028463 None:intergenic 50.0%
!! AGCCATTTTCGAGGCGTTTG+AGG - chr7_1:18028444-18028463 Msa1012680:CDS 50.0%
TGCCTCAAACGCCTCGAAAA+TGG + chr7_1:18028449-18028468 None:intergenic 50.0%
!! TCCCTAACCGATTCGATGCA+CGG + chr7_1:18028592-18028611 None:intergenic 50.0%
CAAGTTGTTCTCCAACAGGG+TGG + chr7_1:18028669-18028688 None:intergenic 50.0%
CCCTGTTGGAGAACAACTTG+AGG - chr7_1:18028669-18028688 Msa1012680:CDS 50.0%
ACACGGCGGTTAAACTTGTG+CGG + chr7_1:18028703-18028722 None:intergenic 50.0%
CACAAGTTTAACCGCCGTGT+AGG - chr7_1:18028703-18028722 Msa1012680:CDS 50.0%
AACACGGTGGAGACGGTTAA+CGG + chr7_1:18028749-18028768 None:intergenic 50.0%
CGAGATGATTGCCAGGAACA+CGG + chr7_1:18028765-18028784 None:intergenic 50.0%
CGTGTTCCTGGCAATCATCT+CGG - chr7_1:18028763-18028782 Msa1012680:CDS 50.0%
GTGTTCCTGGCAATCATCTC+GGG - chr7_1:18028764-18028783 Msa1012680:CDS 50.0%
! CCAAAAAGTACGGCCCGTTA+TGG + chr7_1:18028855-18028874 None:intergenic 50.0%
!!! CCATAACGGGCCGTACTTTT+TGG - chr7_1:18028852-18028871 Msa1012680:CDS 50.0%
!! CTTTTTGGGCCGATTTCTCG+AGG - chr7_1:18028867-18028886 Msa1012680:CDS 50.0%
TACTGCTCTACCTTAGCCCT+TGG + chr7_1:18028955-18028974 None:intergenic 50.0%
CCATGCAGAAGCAGCGATAA+TGG + chr7_1:18029211-18029230 None:intergenic 50.0%
CCATTATCGCTGCTTCTGCA+TGG - chr7_1:18029208-18029227 Msa1012680:CDS 50.0%
! CAGGCCATTGGTAGCCTTGA+AGG + chr7_1:18028504-18028523 None:intergenic 55.0%
CCTGCATGAATGCAGGCCAT+TGG + chr7_1:18028516-18028535 None:intergenic 55.0%
CCAATGGCCTGCATTCATGC+AGG - chr7_1:18028513-18028532 Msa1012680:CDS 55.0%
GCCTGCATTCATGCAGGCAT+TGG - chr7_1:18028519-18028538 Msa1012680:CDS 55.0%
GCCAATGCCTGCATGAATGC+AGG + chr7_1:18028523-18028542 None:intergenic 55.0%
!! TCATGCAGGCATTGGCTGCA+CGG - chr7_1:18028527-18028546 Msa1012680:CDS 55.0%
GCTCCGTTCCTTAGGATCAC+TGG - chr7_1:18028559-18028578 Msa1012680:CDS 55.0%
GCCCAACTCCAGTGATCCTA+AGG + chr7_1:18028570-18028589 None:intergenic 55.0%
AGTTGGGCCGTGCATCGAAT+CGG - chr7_1:18028582-18028601 Msa1012680:CDS 55.0%
GCCGTGCATCGAATCGGTTA+GGG - chr7_1:18028588-18028607 Msa1012680:CDS 55.0%
CAACAGGGTGGAACTCGAAG+GGG + chr7_1:18028657-18028676 None:intergenic 55.0%
CCAACAGGGTGGAACTCGAA+GGG + chr7_1:18028658-18028677 None:intergenic 55.0%
TCCAACAGGGTGGAACTCGA+AGG + chr7_1:18028659-18028678 None:intergenic 55.0%
GATGATTGCCAGGAACACGG+TGG + chr7_1:18028762-18028781 None:intergenic 55.0%
AGGTTCCCGAGATGATTGCC+AGG + chr7_1:18028772-18028791 None:intergenic 55.0%
TTCCTGTGGAGTCAGCACCA+AGG - chr7_1:18028935-18028954 Msa1012680:CDS 55.0%
TCCTGTGGAGTCAGCACCAA+GGG - chr7_1:18028936-18028955 Msa1012680:CDS 55.0%
ACCGGAGATTCGGAACATCG+TGG - chr7_1:18028984-18029003 Msa1012680:CDS 55.0%
GCCACGATGTTCCGAATCTC+CGG + chr7_1:18028988-18029007 None:intergenic 55.0%
CGGAACATCGTGGCATGTGA+AGG - chr7_1:18028994-18029013 Msa1012680:CDS 55.0%
CATCGTGGCATGTGAAGGTG+AGG - chr7_1:18028999-18029018 Msa1012680:CDS 55.0%
TGGCATGTGAAGGTGAGGAG+AGG - chr7_1:18029004-18029023 Msa1012680:CDS 55.0%
! CAGGCCATTGGTAGCCTTGA+AGG + chr7_1:18028504-18028523 None:intergenic 55.0%
CCTGCATGAATGCAGGCCAT+TGG + chr7_1:18028516-18028535 None:intergenic 55.0%
CCAATGGCCTGCATTCATGC+AGG - chr7_1:18028513-18028532 Msa1012680:CDS 55.0%
GCCTGCATTCATGCAGGCAT+TGG - chr7_1:18028519-18028538 Msa1012680:CDS 55.0%
GCCAATGCCTGCATGAATGC+AGG + chr7_1:18028523-18028542 None:intergenic 55.0%
!! TCATGCAGGCATTGGCTGCA+CGG - chr7_1:18028527-18028546 Msa1012680:CDS 55.0%
GCTCCGTTCCTTAGGATCAC+TGG - chr7_1:18028559-18028578 Msa1012680:CDS 55.0%
GCCCAACTCCAGTGATCCTA+AGG + chr7_1:18028570-18028589 None:intergenic 55.0%
AGTTGGGCCGTGCATCGAAT+CGG - chr7_1:18028582-18028601 Msa1012680:CDS 55.0%
GCCGTGCATCGAATCGGTTA+GGG - chr7_1:18028588-18028607 Msa1012680:CDS 55.0%
CAACAGGGTGGAACTCGAAG+GGG + chr7_1:18028657-18028676 None:intergenic 55.0%
CCAACAGGGTGGAACTCGAA+GGG + chr7_1:18028658-18028677 None:intergenic 55.0%
TCCAACAGGGTGGAACTCGA+AGG + chr7_1:18028659-18028678 None:intergenic 55.0%
GATGATTGCCAGGAACACGG+TGG + chr7_1:18028762-18028781 None:intergenic 55.0%
AGGTTCCCGAGATGATTGCC+AGG + chr7_1:18028772-18028791 None:intergenic 55.0%
TTCCTGTGGAGTCAGCACCA+AGG - chr7_1:18028935-18028954 Msa1012680:CDS 55.0%
TCCTGTGGAGTCAGCACCAA+GGG - chr7_1:18028936-18028955 Msa1012680:CDS 55.0%
ACCGGAGATTCGGAACATCG+TGG - chr7_1:18028984-18029003 Msa1012680:CDS 55.0%
GCCACGATGTTCCGAATCTC+CGG + chr7_1:18028988-18029007 None:intergenic 55.0%
CGGAACATCGTGGCATGTGA+AGG - chr7_1:18028994-18029013 Msa1012680:CDS 55.0%
CATCGTGGCATGTGAAGGTG+AGG - chr7_1:18028999-18029018 Msa1012680:CDS 55.0%
TGGCATGTGAAGGTGAGGAG+AGG - chr7_1:18029004-18029023 Msa1012680:CDS 55.0%
! GCTGCGCCGCTGTTCCTTTT+TGG + chr7_1:18027910-18027929 None:intergenic 60.0%
GGCCGTGCATCGAATCGGTT+AGG - chr7_1:18028587-18028606 Msa1012680:CDS 60.0%
! CCCTTCGAGTTCCACCCTGT+TGG - chr7_1:18028655-18028674 Msa1012680:CDS 60.0%
GTTTAACCGCCGTGTAGGCG+AGG - chr7_1:18028708-18028727 Msa1012680:CDS 60.0%
AACCGTCTCCACCGTGTTCC+TGG - chr7_1:18028751-18028770 Msa1012680:CDS 60.0%
TGCCAGGAACACGGTGGAGA+CGG + chr7_1:18028756-18028775 None:intergenic 60.0%
GGAGTCAGCACCAAGGGCTA+AGG - chr7_1:18028942-18028961 Msa1012680:CDS 60.0%
! GCTGCGCCGCTGTTCCTTTT+TGG + chr7_1:18027910-18027929 None:intergenic 60.0%
GGCCGTGCATCGAATCGGTT+AGG - chr7_1:18028587-18028606 Msa1012680:CDS 60.0%
! CCCTTCGAGTTCCACCCTGT+TGG - chr7_1:18028655-18028674 Msa1012680:CDS 60.0%
GTTTAACCGCCGTGTAGGCG+AGG - chr7_1:18028708-18028727 Msa1012680:CDS 60.0%
AACCGTCTCCACCGTGTTCC+TGG - chr7_1:18028751-18028770 Msa1012680:CDS 60.0%
TGCCAGGAACACGGTGGAGA+CGG + chr7_1:18028756-18028775 None:intergenic 60.0%
GGAGTCAGCACCAAGGGCTA+AGG - chr7_1:18028942-18028961 Msa1012680:CDS 60.0%
!! CTAAGGAACGGAGCACCGCC+GGG + chr7_1:18028553-18028572 None:intergenic 65.0%
!! CCTAAGGAACGGAGCACCGC+CGG + chr7_1:18028554-18028573 None:intergenic 65.0%
CCAAAGCCTCGCCTACACGG+CGG + chr7_1:18028717-18028736 None:intergenic 65.0%
CCGCCAAAGCCTCGCCTACA+CGG + chr7_1:18028720-18028739 None:intergenic 65.0%
! CCGTGTAGGCGAGGCTTTGG+CGG - chr7_1:18028717-18028736 Msa1012680:CDS 65.0%
!! GCCCTTGGTGCTGACTCCAC+AGG + chr7_1:18028940-18028959 None:intergenic 65.0%
!! CTAAGGAACGGAGCACCGCC+GGG + chr7_1:18028553-18028572 None:intergenic 65.0%
!! CCTAAGGAACGGAGCACCGC+CGG + chr7_1:18028554-18028573 None:intergenic 65.0%
CCAAAGCCTCGCCTACACGG+CGG + chr7_1:18028717-18028736 None:intergenic 65.0%
CCGCCAAAGCCTCGCCTACA+CGG + chr7_1:18028720-18028739 None:intergenic 65.0%
! CCGTGTAGGCGAGGCTTTGG+CGG - chr7_1:18028717-18028736 Msa1012680:CDS 65.0%
!! GCCCTTGGTGCTGACTCCAC+AGG + chr7_1:18028940-18028959 None:intergenic 65.0%
!! CAGGCATTGGCTGCACGGCC+CGG - chr7_1:18028532-18028551 Msa1012680:CDS 70.0%
CCGGCGGTGCTCCGTTCCTT+AGG - chr7_1:18028551-18028570 Msa1012680:CDS 70.0%
CCGCCGTGTAGGCGAGGCTT+TGG - chr7_1:18028714-18028733 Msa1012680:CDS 70.0%
!! CAGGCATTGGCTGCACGGCC+CGG - chr7_1:18028532-18028551 Msa1012680:CDS 70.0%
CCGGCGGTGCTCCGTTCCTT+AGG - chr7_1:18028551-18028570 Msa1012680:CDS 70.0%
CCGCCGTGTAGGCGAGGCTT+TGG - chr7_1:18028714-18028733 Msa1012680:CDS 70.0%
!! GCATTGGCTGCACGGCCCGG+CGG - chr7_1:18028535-18028554 Msa1012680:CDS 75.0%
!! GCATTGGCTGCACGGCCCGG+CGG - chr7_1:18028535-18028554 Msa1012680:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 18026811 18029239 18026811 ID=Msa1012680;Name=Msa1012680
chr7_1 mRNA 18026811 18029239 18026811 ID=Msa1012680-mRNA-1;Parent=Msa1012680;Name=Msa1012680-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|2|0|674
chr7_1 exon 18028373 18029239 18028373 ID=Msa1012680-mRNA-1:exon:4520;Parent=Msa1012680-mRNA-1
chr7_1 exon 18026811 18027968 18026811 ID=Msa1012680-mRNA-1:exon:4519;Parent=Msa1012680-mRNA-1
chr7_1 CDS 18028373 18029239 18028373 ID=Msa1012680-mRNA-1:cds;Parent=Msa1012680-mRNA-1
chr7_1 CDS 18026811 18027968 18026811 ID=Msa1012680-mRNA-1:cds;Parent=Msa1012680-mRNA-1
Gene Sequence

>Msa1012680

ATGATGAATTCACTTTGTGGAAGCTCAAATTCTCTCAAAGAAAAATGTCTTCAACCCAATTCTTCAAATCAAACAAATACACACTCAAAGAAAAATGCCACAAATTCTTGTGGTGATTTAGAGCAAATTAATGTTCTAACTCCACAAAGCCTAAACTTACCATCTCTCAAATTTGACTTAGATGGTGATGTGGAAGTCCAATCACCAGATAGTTCAATGTGGGAAGCATTTTTCAATGACCATTCAGATAATGATTTCATGATATCATCACCAATTAGAAACATTAACCCTAATTCACCACAAGCTTCTACTTACAATAATTGTAACTATAACTATGCTCAAGGCATGCAAATTCAAAGCCTATCAGGTTGTTCACCACCTCGTTTTGCATCACAAATTGGTTCATTAAATAGTAATAACCAACAAAAAGGGAAAGGACTTAGTCCACTTCATAGAGTATTTAATTCACCAAATAATCAATATATGCAACATGTTGAAAATCTTTCGTTGCCAGCTATTGAAGAGTTCTTGGAAGATTTTCAAGGTGATGTTGATCACTTTTCATCAACAAAGGTTTCTTCTGAATGTTTTGACATGGAAACTCCAATATCAACAATTTTGGATAGTTTAACAATGCAAAATTCTTCAAGCTATTGTGGTTCAGTTAATGAAGAATCTACTATTTTGCATGGTGGTAATTCTTCTTCTCAACTTTCTCAAGAGAGTGATATGTATCATCAAATGGGATCTATGGCTAGTGCTTCTCTTTCACAAGCTTTACAGCAAGAAAGGTACCAAGAGAAACATCAAAAGATGCAAGCTCAACAACAGAGTCTAACAGTTCCTATTCCAATTGGAATTGAGCAGGAACAAGACAGTGGACTTCAACTAGTGCACTTACTTCTAGCATGTGCTGAAGCAGTGGCAAAAGGTGAATACATGCTAGCAAGAAGGTACCTACACCAGCTCAATAGAGTAGTAACACCACTAGGTGACTCCATGCAAAGAGTAGCTTCATGTTTCACAGAATCTCTAAGTGCAAGACTGGCTGCAACCCTAACAACCAAGTCATCATCAACCAAAAAGTTAACACCATCATCGTTATCATCGTCATCCTCTTCATCATGTTTATCTACCTTCCCATCAAACCCTATGGAAGTCCTCAAGATCTATCAAATTGTCTACCAGGCTTGCCCTTACATAAAATTTGCACACTTTACCGCTAACCAAGCCATTTTCGAGGCGTTTGAGGCAGAAGAACGTGTCCATGTCATCGACCTTGATATCCTTCAAGGCTACCAATGGCCTGCATTCATGCAGGCATTGGCTGCACGGCCCGGCGGTGCTCCGTTCCTTAGGATCACTGGAGTTGGGCCGTGCATCGAATCGGTTAGGGAAACCGGACGATGCTTAACAGAGTTAGCTCATTCTCTTCGTATCCCCTTCGAGTTCCACCCTGTTGGAGAACAACTTGAGGATCTAAAACCGCACAAGTTTAACCGCCGTGTAGGCGAGGCTTTGGCGGTTAACACCGTTAACCGTCTCCACCGTGTTCCTGGCAATCATCTCGGGAACCTGTTATCCATGATAAGAGACCAAGCACCAAACATAGTGACACTTGTGGAGCAAGAAGCAAGCCATAACGGGCCGTACTTTTTGGGCCGATTTCTCGAGGCTTTGCATTACTACTCGGCAATTTTCGACTCTTTGGACGCTACTTTTCCTGTGGAGTCAGCACCAAGGGCTAAGGTAGAGCAGTATATATTTGCACCGGAGATTCGGAACATCGTGGCATGTGAAGGTGAGGAGAGGATAGAGAGACATGAGAGGTTGGAGAAATGGAGGAAGATAATGGAAGGGAAAGGGTTCAAAGGAGTGCCTCTAAGTCCTAATGCAGTGACTCAATCAAGGATATTATTGGGTTTGTATTCATGTGATGGTTACAGGTTAACTGAGGATAAAGGTTGTTTGTTGCTTGGGTGGCAAGACAGAGCCATTATCGCTGCTTCTGCATGGCGATGCTGA
Protein sequence

>Msa1012680

MMNSLCGSSNSLKEKCLQPNSSNQTNTHSKKNATNSCGDLEQINVLTPQSLNLPSLKFDLDGDVEVQSPDSSMWEAFFNDHSDNDFMISSPIRNINPNSPQASTYNNCNYNYAQGMQIQSLSGCSPPRFASQIGSLNSNNQQKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDFQGDVDHFSSTKVSSECFDMETPISTILDSLTMQNSSSYCGSVNEESTILHGGNSSSQLSQESDMYHQMGSMASASLSQALQQERYQEKHQKMQAQQQSLTVPIPIGIEQEQDSGLQLVHLLLACAEAVAKGEYMLARRYLHQLNRVVTPLGDSMQRVASCFTESLSARLAATLTTKSSSTKKLTPSSLSSSSSSSCLSTFPSNPMEVLKIYQIVYQACPYIKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPCIESVRETGRCLTELAHSLRIPFEFHPVGEQLEDLKPHKFNRRVGEALAVNTVNRLHRVPGNHLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPVESAPRAKVEQYIFAPEIRNIVACEGEERIERHERLEKWRKIMEGKGFKGVPLSPNAVTQSRILLGLYSCDGYRLTEDKGCLLLGWQDRAIIAASAWRC*