AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1013780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1013780 MtrunA17_Chr7g0225791 83.992 1012 89 12 1 946 118 1122 0.0 1538
Msa1013780 MtrunA17_Chr4g0047081 61.643 1035 258 20 39 947 52 1073 0.0 1050
Msa1013780 MtrunA17_Chr7g0233031 54.545 1045 319 27 25 946 71 1082 0.0 871
Msa1013780 MtrunA17_Chr7g0233021 53.854 1012 339 25 19 947 105 1071 0.0 871
Msa1013780 MtrunA17_Chr7g0233001 88.547 358 41 0 590 947 1 358 0.0 672
Msa1013780 MtrunA17_Chr7g0232991 64.826 489 142 8 484 947 15 498 0.0 588
Msa1013780 MtrunA17_Chr2g0320781 90.000 130 13 0 818 947 1 130 2.48e-74 244
Msa1013780 MtrunA17_Chr1g0191141 31.588 554 336 14 415 942 400 936 1.02e-71 258
Msa1013780 MtrunA17_Chr3g0114161 31.005 587 352 17 408 954 520 1093 3.18e-67 245
Msa1013780 MtrunA17_Chr7g0224051 29.881 589 363 14 401 954 389 962 4.57e-67 244
Msa1013780 MtrunA17_Chr5g0437621 30.488 574 346 15 407 944 583 1139 3.51e-64 236
Msa1013780 MtrunA17_Chr8g0352361 27.191 559 322 15 408 942 234 731 8.90e-54 202
Msa1013780 MtrunA17_Chr2g0296421 28.738 515 279 14 452 943 432 881 1.88e-53 202
Msa1013780 MtrunA17_Chr1g0190391 28.333 240 142 8 534 770 576 788 1.04e-23 107
Msa1013780 MtrunA17_Chr7g0224021 41.228 114 64 2 510 623 1 111 7.92e-21 89.0
Msa1013780 MtrunA17_Chr5g0393461 25.419 358 205 12 513 863 161 463 1.71e-17 87.8
Msa1013780 MtrunA17_Chr7g0224031 27.184 206 132 5 692 880 30 234 7.58e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1013780 AT1G05490.1 46.128 594 250 19 397 946 668 1235 2.20e-143 462
Msa1013780 AT3G24340.1 44.065 556 270 13 396 946 444 963 1.18e-131 425
Msa1013780 AT3G42670.2 31.393 567 338 15 408 942 541 1088 2.89e-66 243
Msa1013780 AT3G42670.3 31.393 567 338 15 408 942 541 1088 2.89e-66 243
Msa1013780 AT3G42670.1 31.393 567 338 15 408 942 541 1088 2.89e-66 243
Msa1013780 AT3G42670.4 31.107 569 339 15 408 942 541 1090 7.58e-66 242
Msa1013780 AT5G20420.1 31.095 566 345 15 408 944 547 1096 6.76e-65 239
Msa1013780 AT2G16390.2 28.963 511 289 16 452 942 273 729 1.04e-54 206
Msa1013780 AT2G16390.1 28.963 511 289 16 452 942 270 726 1.55e-54 205
Msa1013780 AT2G21450.2 28.191 564 318 22 407 942 155 659 8.06e-51 193
Msa1013780 AT2G21450.1 28.709 519 291 19 452 942 185 652 1.05e-50 192
Msa1013780 AT2G21450.3 28.709 519 291 19 452 942 94 561 1.23e-50 191
Msa1013780 AT3G19210.1 25.749 334 190 11 536 862 176 458 1.40e-16 85.5
Msa1013780 AT3G19210.3 25.749 334 190 11 536 862 176 458 1.49e-16 85.1
Msa1013780 AT3G19210.2 25.776 322 181 11 536 850 176 446 1.58e-15 82.0
Msa1013780 AT3G32330.1 24.041 391 195 13 534 902 17 327 1.01e-14 77.0

Find 176 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCTACAGATTGGAAATTT+AGG 0.126449 7_1:+20738276 Msa1013780:intron
ATATGACTTCTTTGATTTCT+TGG 0.141776 7_1:-20739498 None:intergenic
CTCCATTCCAGAACAATTTC+TGG 0.174401 7_1:+20739574 Msa1013780:CDS
TATGGTCAGCCTTGTCTTTC+CGG 0.181588 7_1:-20739073 None:intergenic
TTTGGCTTTGGCATTGTCTT+TGG 0.201563 7_1:-20737602 None:intergenic
TCTGCGACACAAAGTTTAAT+TGG 0.236002 7_1:-20740157 None:intergenic
GAAATCAAAGAAGTCATATT+TGG 0.244946 7_1:+20739502 Msa1013780:CDS
CGGAGTTGTGAACCTGTTTC+GGG 0.246918 7_1:+20739702 Msa1013780:CDS
TTCAAAGAAACAAGCATTCT+TGG 0.249693 7_1:+20739336 Msa1013780:CDS
ATTAGGTTTATCCCTTTCTT+TGG 0.252160 7_1:-20737515 None:intergenic
AGCCTTGTCTTTCCGGTTCC+AGG 0.258151 7_1:-20739066 None:intergenic
ATGATTTATGTCCCTGCTTA+TGG 0.263420 7_1:-20739671 None:intergenic
TAAGGAGAAAGAGAAGAAAA+AGG 0.268400 7_1:+20737219 Msa1013780:CDS
TATAAAGTTTGTTTCAAATC+TGG 0.269020 7_1:-20738925 None:intergenic
GCGGAGTTGTGAACCTGTTT+CGG 0.280802 7_1:+20739701 Msa1013780:CDS
AAGAAGGCTTTGAATTCATT+TGG 0.281224 7_1:+20738959 Msa1013780:CDS
TGCTCCTTGCTAAATGCTAT+TGG 0.287940 7_1:+20737863 Msa1013780:CDS
TTCTCCTTACCATCATTATA+AGG 0.289539 7_1:-20737205 None:intergenic
TCATCTGAATGTATTGTAAT+CGG 0.290335 7_1:-20736770 None:intergenic
GACAATAATCGGCAAGCATT+TGG 0.295763 7_1:-20739127 None:intergenic
ATCTACAGATTGGAAATTTA+GGG 0.298187 7_1:+20738277 Msa1013780:intron
AAAATAAGCTTCCAGGGTTA+AGG 0.303301 7_1:+20739817 Msa1013780:CDS
CGAAGATTCACAGTTTCATT+AGG 0.313100 7_1:-20737532 None:intergenic
CTTTAATGTGGCGGAGGAAT+TGG 0.314903 7_1:+20737255 Msa1013780:CDS
TTTGTTTCAAATCTGGAATT+AGG 0.316184 7_1:-20738918 None:intergenic
CGAAGTGTTATGGGATGAAT+TGG 0.316690 7_1:+20738053 Msa1013780:CDS
GGGTGATTATGATGTTAAAA+AGG 0.321436 7_1:+20736664 Msa1013780:CDS
AGGAGGAGAACGAAGTGTTA+TGG 0.324265 7_1:+20738043 Msa1013780:CDS
TTTATCCCTTTCTTTGGCTT+TGG 0.325874 7_1:-20737509 None:intergenic
GGAATCAGCTACAATTTGTT+TGG 0.329076 7_1:+20739357 Msa1013780:CDS
TTAAGCAATCCCGAGTTATC+TGG 0.334660 7_1:+20739222 Msa1013780:CDS
CATCCATGTTGAGAAGAATA+AGG 0.342559 7_1:+20737777 Msa1013780:CDS
CAGAAACGAATCATCCTTTC+CGG 0.343198 7_1:+20739549 Msa1013780:CDS
ATCCTTGAAAATAAGCTTCC+AGG 0.345898 7_1:+20739810 Msa1013780:CDS
GAACAGTACTCTGTTGGTTC+TGG 0.347470 7_1:+20736944 Msa1013780:CDS
TTTGTTGTGTTGCCCGAAAC+AGG 0.347643 7_1:-20739714 None:intergenic
CACAGTTGAATCATTCTTCA+TGG 0.355596 7_1:-20737899 None:intergenic
GGAGGAGAACGAAGTGTTAT+GGG 0.356347 7_1:+20738044 Msa1013780:CDS
CTTGCAATGAAGGCACAGTT+TGG 0.359027 7_1:+20738893 Msa1013780:CDS
ACTAATTTCTCTTGCAATGA+AGG 0.366544 7_1:+20738883 Msa1013780:CDS
TTTGACTTGGGATTTGCATT+TGG 0.367698 7_1:-20737578 None:intergenic
ATCCACACTTTCATTAGGTT+TGG 0.370140 7_1:-20737620 None:intergenic
GCAACATCCACACTTTCATT+AGG 0.370559 7_1:-20737625 None:intergenic
GGAAGAAAAGCATCATTTGA+TGG 0.370734 7_1:+20738802 Msa1013780:CDS
CATTGTCTTTGGATTTGACT+TGG 0.372859 7_1:-20737591 None:intergenic
AAATAAGCTTCCAGGGTTAA+GGG 0.374020 7_1:+20739818 Msa1013780:CDS
TTTGTTGATTTGGATGATTA+TGG 0.376062 7_1:+20737055 Msa1013780:CDS
GGGAGGATGAATTCAAGAAA+TGG 0.377896 7_1:+20739175 Msa1013780:CDS
ATGTCAAGGGTTTAGATGTT+GGG 0.378265 7_1:+20737671 Msa1013780:CDS
AGATTTCCCTGTGAAGGTTC+AGG 0.380692 7_1:+20738781 Msa1013780:CDS
CTGCTAGTATACTACTAACT+TGG 0.381021 7_1:+20739154 Msa1013780:CDS
TCCAGGGTTAAGGGACTGTT+TGG 0.382331 7_1:+20739827 Msa1013780:CDS
ATTGTAAAGGAGCATGGAAT+TGG 0.383700 7_1:-20740124 None:intergenic
GCTCCTTGCTAAATGCTATT+GGG 0.387754 7_1:+20737864 Msa1013780:CDS
AGCTCAGGCGGTATCGTGTT+AGG 0.387985 7_1:-20739636 None:intergenic
ACAATAATCGGCAAGCATTT+GGG 0.393842 7_1:-20739126 None:intergenic
ACTTTCATTAGGTTTGGCTT+TGG 0.394092 7_1:-20737614 None:intergenic
TCGTTTCTGCGCTTGAATCT+TGG 0.394890 7_1:-20739535 None:intergenic
ATTTCTCATGCTCCTGGAAC+CGG 0.395216 7_1:+20739054 Msa1013780:CDS
AATGATGATGATAGTTCTTC+TGG 0.401364 7_1:+20737178 Msa1013780:CDS
AAAGCTCCCAGAAATTGTTC+TGG 0.406710 7_1:-20739581 None:intergenic
GAAGTGGAGCATTCAGATTA+TGG 0.408065 7_1:+20737367 Msa1013780:CDS
TTCTACTACCTTTGAGAAGA+AGG 0.409816 7_1:+20737402 Msa1013780:CDS
ATTGTTCTGGAATGGAGTTC+CGG 0.412671 7_1:-20739568 None:intergenic
TTTCCTTGAATGTTCTCTTT+CGG 0.413344 7_1:+20739965 Msa1013780:CDS
CTTCCGAAAGAGAACATTCA+AGG 0.414255 7_1:-20739968 None:intergenic
TGCTCTTGACAAGGATCAGC+TGG 0.414633 7_1:+20740001 Msa1013780:CDS
TTCAACTGTGTTCGAGTTCA+AGG 0.414802 7_1:+20737912 Msa1013780:CDS
CATCTGAATGTATTGTAATC+GGG 0.416350 7_1:-20736769 None:intergenic
TCATCATTGTTTACAGAAGA+AGG 0.417001 7_1:-20737346 None:intergenic
CTAGCAGGAGCGACAATAAT+CGG 0.420974 7_1:-20739138 None:intergenic
CCTTTGTTCACGTGCACAAA+GGG 0.423742 7_1:+20739784 Msa1013780:CDS
AAGATTCTTCTTAAAGCTCC+TGG 0.427589 7_1:+20739447 Msa1013780:CDS
GAAAAGTGTGGTTGGACACT+TGG 0.428846 7_1:+20736743 Msa1013780:CDS
CACGAGGCTGAAATTGCTAA+TGG 0.430894 7_1:+20739758 Msa1013780:CDS
TGCATTATTTCTCATGCTCC+TGG 0.431774 7_1:+20739048 Msa1013780:CDS
GGATTGCTTAAATTGTGAAA+TGG 0.433621 7_1:-20739210 None:intergenic
TCTGGCTCTCCTTATAATGA+TGG 0.444439 7_1:+20737196 Msa1013780:CDS
CATGTCAAGGGTTTAGATGT+TGG 0.458461 7_1:+20737670 Msa1013780:CDS
TCCATTCCAGAACAATTTCT+GGG 0.462331 7_1:+20739575 Msa1013780:CDS
TTGCAATGAAGGCACAGTTT+GGG 0.468703 7_1:+20738894 Msa1013780:CDS
GTAAATGTTTCACTGTTTGA+TGG 0.471326 7_1:+20738826 Msa1013780:CDS
TGGTCTTTAATTAATTGTAA+AGG 0.475446 7_1:-20740137 None:intergenic
GCAAAAGACCATGGAGGAGG+AGG 0.480692 7_1:+20738026 Msa1013780:CDS
ATGCGGTTGAAACGTTTGAT+TGG 0.484320 7_1:+20739259 Msa1013780:CDS
GAAAATGTGAAGGAGAGAAA+AGG 0.487529 7_1:+20739408 Msa1013780:CDS
GGAGGATGAATTCAAGAAAT+GGG 0.494983 7_1:+20739176 Msa1013780:CDS
AGAACGCTTCACTAAGCTTA+AGG 0.496015 7_1:-20739610 None:intergenic
CAAGTTAGTAGTATACTAGC+AGG 0.498458 7_1:-20739153 None:intergenic
TTCGTTCTCCTCCTCCTCCA+TGG 0.498689 7_1:-20738034 None:intergenic
GGTTTGTTAGTTCTAGATGA+AGG 0.499262 7_1:+20739468 Msa1013780:CDS
CCCTTTGTGCACGTGAACAA+AGG 0.509916 7_1:-20739784 None:intergenic
CTCTCCTTATAATGATGGTA+AGG 0.512852 7_1:+20737201 Msa1013780:CDS
ATTGTCTTTGGATTTGACTT+GGG 0.514476 7_1:-20737590 None:intergenic
ATATGCCTTGAGAAACACTA+TGG 0.514676 7_1:-20739091 None:intergenic
TTCTGTAAACAATGATGAAG+TGG 0.514764 7_1:+20737351 Msa1013780:CDS
TCGTGTTCACATCGAGATGA+TGG 0.518272 7_1:-20738333 None:intergenic
TTCTGATGATGATGTTAAAG+AGG 0.519113 7_1:+20736985 Msa1013780:CDS
GCCACCTTCACTGCAAGGAT+CGG 0.519684 7_1:-20739025 None:intergenic
TCAAAGCCTTCTTGTTGATG+AGG 0.523503 7_1:-20738949 None:intergenic
TAATTAATTGTAAAGGAGCA+TGG 0.525354 7_1:-20740130 None:intergenic
CCTTTGTGCACGTGAACAAA+GGG 0.525750 7_1:-20739783 None:intergenic
TTGTTGCCAAAGCCAAAGAA+AGG 0.527606 7_1:+20737503 Msa1013780:CDS
GGACTGTTTGGTGACTTTGA+AGG 0.530361 7_1:+20739839 Msa1013780:CDS
GTTGATAGATTTCCCTGTGA+AGG 0.537816 7_1:+20738775 Msa1013780:CDS
CCCTTTGTTCACGTGCACAA+AGG 0.540394 7_1:+20739783 Msa1013780:CDS
CAAATATATCTCACCACTAG+TGG 0.541968 7_1:+20738419 Msa1013780:CDS
AACAAAGCAAGAAATGATGA+AGG 0.542456 7_1:+20737711 Msa1013780:CDS
TCCTTGAAAATAAGCTTCCA+GGG 0.545299 7_1:+20739811 Msa1013780:CDS
TCTACTACCTTTGAGAAGAA+GGG 0.545851 7_1:+20737403 Msa1013780:CDS
CTCGTGATCTTATCATCGGA+AGG 0.550361 7_1:-20739741 None:intergenic
AGAAGAACCCTTCTTCTCAA+AGG 0.556039 7_1:-20737410 None:intergenic
CAGCCTCGTGATCTTATCAT+CGG 0.558287 7_1:-20739745 None:intergenic
GGTGATGAGAAGATGTTTGA+GGG 0.558428 7_1:+20736644 None:intergenic
GGCGAGTTTGATGCTGAAGA+TGG 0.558636 7_1:+20736707 Msa1013780:CDS
ACAAGATACACAGCCACCGC+TGG 0.559727 7_1:+20737951 Msa1013780:CDS
TGTCAAGGGTTTAGATGTTG+GGG 0.561243 7_1:+20737672 Msa1013780:CDS
CTTAGACTGAACCCATATGA+AGG 0.561386 7_1:+20740029 Msa1013780:CDS
AATGCCGATCCTTGCAGTGA+AGG 0.561759 7_1:+20739021 Msa1013780:CDS
ATGTTCTTTACCAGATAACT+CGG 0.563939 7_1:-20739232 None:intergenic
TCCCAGAAATTGTTCTGGAA+TGG 0.564172 7_1:-20739576 None:intergenic
TTATATCCTCATCAACAAGA+AGG 0.564538 7_1:+20738943 Msa1013780:CDS
TGTTGCCAAAGCCAAAGAAA+GGG 0.565572 7_1:+20737504 Msa1013780:CDS
TCAGATGAAGAACACTCTGT+TGG 0.567956 7_1:+20736785 Msa1013780:CDS
ATTCAAGGAAAAGCGATGGA+TGG 0.568688 7_1:-20739953 None:intergenic
AAAATACTTTAATGTGGCGG+AGG 0.573273 7_1:+20737249 Msa1013780:CDS
AGAATCTGACGCTGTATCCA+TGG 0.574662 7_1:+20738089 Msa1013780:CDS
AAGGAAAAGCGATGGATGGA+CGG 0.575965 7_1:-20739949 None:intergenic
GAACATTCAAGGAAAAGCGA+TGG 0.581694 7_1:-20739957 None:intergenic
TGGTGATGAGAAGATGTTTG+AGG 0.582093 7_1:+20736643 None:intergenic
AATCGGCAAGCATTTGGGAA+AGG 0.584307 7_1:-20739121 None:intergenic
TCTGATGATGATGTTAAAGA+GGG 0.584384 7_1:+20736986 Msa1013780:CDS
AAGGAATCTATTGATAACAA+TGG 0.584387 7_1:+20737796 Msa1013780:CDS
GAAGGAAAAGAGCATGTCAA+GGG 0.587728 7_1:+20737658 Msa1013780:CDS
GATGAAGAACAGTACTCTGT+TGG 0.587952 7_1:+20736938 Msa1013780:CDS
TCAAAGAAGTCATATTTGGA+AGG 0.589347 7_1:+20739506 Msa1013780:CDS
TGCTAGTATACTACTAACTT+GGG 0.589951 7_1:+20739155 Msa1013780:CDS
ATTCCTTATTCTTCTCAACA+TGG 0.589956 7_1:-20737780 None:intergenic
ATGCAGCCACCTTCACTGCA+AGG 0.591972 7_1:-20739030 None:intergenic
TTGTCGAAGAAAAGTGTGGT+TGG 0.591983 7_1:+20736735 Msa1013780:CDS
TGTTTGGTGACTTTGAAGGC+AGG 0.596768 7_1:+20739843 Msa1013780:CDS
AGAAGAATCTGCTCTTGACA+AGG 0.609254 7_1:+20739992 Msa1013780:CDS
TTTCTTCCTGAACCTTCACA+GGG 0.609885 7_1:-20738787 None:intergenic
TGTCCCAATAGCATTTAGCA+AGG 0.610427 7_1:-20737867 None:intergenic
TGTTCTTTACCAGATAACTC+GGG 0.610730 7_1:-20739231 None:intergenic
ACCAAACAGTCCCTTAACCC+TGG 0.613149 7_1:-20739828 None:intergenic
TCTGGAATGGAGTTCCGGAA+AGG 0.615617 7_1:-20739563 None:intergenic
AGCCAAACCTAATGAAAGTG+TGG 0.619641 7_1:+20737618 Msa1013780:CDS
GCCGATCCTTGCAGTGAAGG+TGG 0.620537 7_1:+20739024 Msa1013780:CDS
GTGTTCGAGTTCAAGGAGGA+TGG 0.621068 7_1:+20737919 Msa1013780:CDS
GGTGTATATTGCAAATTGTG+TGG 0.625204 7_1:+20738378 Msa1013780:CDS
TGAAGGAAAAGAGCATGTCA+AGG 0.625489 7_1:+20737657 Msa1013780:CDS
AGTGCAAAAGACCATGGAGG+AGG 0.626765 7_1:+20738023 Msa1013780:CDS
TAATATTCATGAAACGCGGA+TGG 0.633497 7_1:+20739296 Msa1013780:CDS
GCTGACCATAGTGTTTCTCA+AGG 0.634254 7_1:+20739086 Msa1013780:CDS
GATGTTGCTGATTCTAGTGA+AGG 0.640834 7_1:+20737640 Msa1013780:CDS
TCGTGATCTTATCATCGGAA+GGG 0.642928 7_1:-20739740 None:intergenic
GAAACCGTGCTTACCACTAG+TGG 0.644506 7_1:-20738432 None:intergenic
ATATTGCAAATTGTGTGGTG+TGG 0.649175 7_1:+20738383 Msa1013780:CDS
GAATTCAAGAAATGGGACAT+CGG 0.650153 7_1:+20739183 Msa1013780:CDS
CTCCTGGAACCGGAAAGACA+AGG 0.656255 7_1:+20739064 Msa1013780:CDS
TCATCTAGAACTAACAAACC+AGG 0.659449 7_1:-20739465 None:intergenic
GAGGTGAAAAGTGATGAAAG+TGG 0.660634 7_1:+20736686 Msa1013780:CDS
GTCTCCACAGAAACCAGCGG+TGG 0.663008 7_1:-20737964 None:intergenic
TGGGCGAAAATACTTTAATG+TGG 0.666297 7_1:+20737243 Msa1013780:CDS
GCGAAAATACTTTAATGTGG+CGG 0.667240 7_1:+20737246 Msa1013780:CDS
TAGTATACTACTAACTTGGG+AGG 0.670120 7_1:+20739158 Msa1013780:CDS
GTCAAGGGTTTAGATGTTGG+GGG 0.682955 7_1:+20737673 Msa1013780:CDS
AACTGTGTTCGAGTTCAAGG+AGG 0.688944 7_1:+20737915 Msa1013780:CDS
CTTTGTTCACGTGCACAAAG+GGG 0.692748 7_1:+20739785 Msa1013780:CDS
TGGTAAAGAACATGCTGATG+CGG 0.695876 7_1:+20739242 Msa1013780:CDS
CTTCCGATGATAAGATCACG+AGG 0.697185 7_1:+20739742 Msa1013780:CDS
AGAAAATGAGACTAGCGATG+AGG 0.704273 7_1:+20737120 Msa1013780:CDS
AACTTTGTCGAAGAAAAGTG+TGG 0.706660 7_1:+20736731 Msa1013780:CDS
AGCATAATATTCATGAAACG+CGG 0.718625 7_1:+20739292 Msa1013780:CDS
AAAAGTGCAAAAGACCATGG+AGG 0.766977 7_1:+20738020 Msa1013780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGATATTTTTTTTGTAGATT+TGG + chr7_1:20736898-20736917 Msa1013780:CDS 15.0%
!! AAACTTAAATGTTCTTAAAA+TGG - chr7_1:20738122-20738141 None:intergenic 15.0%
!!! AACTTTTACATTTCTAATTT+TGG + chr7_1:20738474-20738493 Msa1013780:intron 15.0%
!!! AGATGATTTTTTTGTTGATT+TGG + chr7_1:20737045-20737064 Msa1013780:intron 20.0%
!!! CATTTTAATTTGTGAACTAT+AGG + chr7_1:20738156-20738175 Msa1013780:intron 20.0%
!! CTGTTTATATGTTTAAACTT+CGG + chr7_1:20738215-20738234 Msa1013780:intron 20.0%
!! TTATCAACATATATATCACA+AGG - chr7_1:20738713-20738732 None:intergenic 20.0%
!!! TATAAAGTTTGTTTCAAATC+TGG - chr7_1:20738928-20738947 None:intergenic 20.0%
!! TGGTCTTTAATTAATTGTAA+AGG - chr7_1:20740140-20740159 None:intergenic 20.0%
! TGATTATGATGTTAAAAAGG+AGG + chr7_1:20736667-20736686 Msa1013780:CDS 25.0%
! TCATCTGAATGTATTGTAAT+CGG - chr7_1:20736773-20736792 None:intergenic 25.0%
!! ACATGATGATAATGTTAAAC+AGG + chr7_1:20736838-20736857 Msa1013780:intron 25.0%
!! CATGATGATAATGTTAAACA+GGG + chr7_1:20736839-20736858 Msa1013780:intron 25.0%
!!! TTTGTTGATTTGGATGATTA+TGG + chr7_1:20737055-20737074 Msa1013780:CDS 25.0%
!!! AATTTCTGAGATGAATAATG+AGG + chr7_1:20737306-20737325 Msa1013780:intron 25.0%
!! AAGGAATCTATTGATAACAA+TGG + chr7_1:20737796-20737815 Msa1013780:CDS 25.0%
! CTTAAATGTTCTTAAAATGG+AGG - chr7_1:20738119-20738138 None:intergenic 25.0%
! TATCTACAGATTGGAAATTT+AGG + chr7_1:20738276-20738295 Msa1013780:intron 25.0%
! ATCTACAGATTGGAAATTTA+GGG + chr7_1:20738277-20738296 Msa1013780:intron 25.0%
! GAAGCTACAAAAATAAAAAG+CGG + chr7_1:20738306-20738325 Msa1013780:CDS 25.0%
! TTGGAACATAACACTATATT+TGG + chr7_1:20738591-20738610 Msa1013780:intron 25.0%
!! GTGATATATATGTTGATAAG+AGG + chr7_1:20738714-20738733 Msa1013780:intron 25.0%
!! TTTGTTTCAAATCTGGAATT+AGG - chr7_1:20738921-20738940 None:intergenic 25.0%
! TGAATTCATTTGGAAAAACT+TGG + chr7_1:20738969-20738988 Msa1013780:CDS 25.0%
!!! TTTCATGCTTTTTCTTATCT+TGG - chr7_1:20739392-20739411 None:intergenic 25.0%
!! ATATGACTTCTTTGATTTCT+TGG - chr7_1:20739501-20739520 None:intergenic 25.0%
! GAAATCAAAGAAGTCATATT+TGG + chr7_1:20739502-20739521 Msa1013780:CDS 25.0%
! GACATAAATCATCTAAAAAG+CGG + chr7_1:20739682-20739701 Msa1013780:CDS 25.0%
!!! AATTTTTGTTCGAGTTTGTT+CGG + chr7_1:20740063-20740082 Msa1013780:CDS 25.0%
! TAATTAATTGTAAAGGAGCA+TGG - chr7_1:20740133-20740152 None:intergenic 25.0%
GGGTGATTATGATGTTAAAA+AGG + chr7_1:20736664-20736683 Msa1013780:CDS 30.0%
CATCTGAATGTATTGTAATC+GGG - chr7_1:20736772-20736791 None:intergenic 30.0%
! TTCTGATGATGATGTTAAAG+AGG + chr7_1:20736985-20737004 Msa1013780:CDS 30.0%
! TCTGATGATGATGTTAAAGA+GGG + chr7_1:20736986-20737005 Msa1013780:CDS 30.0%
! CTCATTTTCTTCACTTTCAT+CGG - chr7_1:20737110-20737129 None:intergenic 30.0%
! AATGATGATGATAGTTCTTC+TGG + chr7_1:20737178-20737197 Msa1013780:CDS 30.0%
TTCTCCTTACCATCATTATA+AGG - chr7_1:20737208-20737227 None:intergenic 30.0%
TAAGGAGAAAGAGAAGAAAA+AGG + chr7_1:20737219-20737238 Msa1013780:CDS 30.0%
AAGGAGAAAGAGAAGAAAAA+GGG + chr7_1:20737220-20737239 Msa1013780:CDS 30.0%
TCATCATTGTTTACAGAAGA+AGG - chr7_1:20737349-20737368 None:intergenic 30.0%
TTCTGTAAACAATGATGAAG+TGG + chr7_1:20737351-20737370 Msa1013780:CDS 30.0%
GAAACAAAAAGCAAAAAGTG+TGG + chr7_1:20737456-20737475 Msa1013780:CDS 30.0%
ATTAGGTTTATCCCTTTCTT+TGG - chr7_1:20737518-20737537 None:intergenic 30.0%
! ATTGTCTTTGGATTTGACTT+GGG - chr7_1:20737593-20737612 None:intergenic 30.0%
AACAAAGCAAGAAATGATGA+AGG + chr7_1:20737711-20737730 Msa1013780:CDS 30.0%
ATTCCTTATTCTTCTCAACA+TGG - chr7_1:20737783-20737802 None:intergenic 30.0%
!! TCAAAAGCACACATTTTATG+CGG + chr7_1:20737833-20737852 Msa1013780:CDS 30.0%
!! TGCAAAGTATTGTGTAATTG+CGG + chr7_1:20738553-20738572 Msa1013780:intron 30.0%
GAACATTAGACCAATAAATC+TGG + chr7_1:20738613-20738632 Msa1013780:intron 30.0%
GAATCTAACACCAGATTTAT+TGG - chr7_1:20738626-20738645 None:intergenic 30.0%
GTAAATGTTTCACTGTTTGA+TGG + chr7_1:20738826-20738845 Msa1013780:CDS 30.0%
ACTAATTTCTCTTGCAATGA+AGG + chr7_1:20738883-20738902 Msa1013780:CDS 30.0%
TTATATCCTCATCAACAAGA+AGG + chr7_1:20738943-20738962 Msa1013780:CDS 30.0%
!! AAGAAGGCTTTGAATTCATT+TGG + chr7_1:20738959-20738978 Msa1013780:CDS 30.0%
TGCTAGTATACTACTAACTT+GGG + chr7_1:20739155-20739174 Msa1013780:CDS 30.0%
GGATTGCTTAAATTGTGAAA+TGG - chr7_1:20739213-20739232 None:intergenic 30.0%
ATGTTCTTTACCAGATAACT+CGG - chr7_1:20739235-20739254 None:intergenic 30.0%
AGCATAATATTCATGAAACG+CGG + chr7_1:20739292-20739311 Msa1013780:CDS 30.0%
TTCAAAGAAACAAGCATTCT+TGG + chr7_1:20739336-20739355 Msa1013780:CDS 30.0%
! GAAAAAGCATGAAAATGTGA+AGG + chr7_1:20739398-20739417 Msa1013780:CDS 30.0%
TCAAAGAAGTCATATTTGGA+AGG + chr7_1:20739506-20739525 Msa1013780:CDS 30.0%
! AAAAAGTTTTTGCCATAAGC+AGG + chr7_1:20739659-20739678 Msa1013780:CDS 30.0%
! AAAAGTTTTTGCCATAAGCA+GGG + chr7_1:20739660-20739679 Msa1013780:CDS 30.0%
TTTCCTTGAATGTTCTCTTT+CGG + chr7_1:20739965-20739984 Msa1013780:CDS 30.0%
!!! TTGTTTTGACACCTTCATAT+GGG - chr7_1:20740043-20740062 None:intergenic 30.0%
!!! TTTGTTTTGACACCTTCATA+TGG - chr7_1:20740044-20740063 None:intergenic 30.0%
AACTTTGTCGAAGAAAAGTG+TGG + chr7_1:20736731-20736750 Msa1013780:CDS 35.0%
GTTAAACAGGGAGAAAAAAG+TGG + chr7_1:20736851-20736870 Msa1013780:intron 35.0%
CTCTCCTTATAATGATGGTA+AGG + chr7_1:20737201-20737220 Msa1013780:CDS 35.0%
AGAAAGAGAAGAAAAAGGGT+GGG + chr7_1:20737224-20737243 Msa1013780:CDS 35.0%
TGGGCGAAAATACTTTAATG+TGG + chr7_1:20737243-20737262 Msa1013780:CDS 35.0%
GCGAAAATACTTTAATGTGG+CGG + chr7_1:20737246-20737265 Msa1013780:CDS 35.0%
AAAATACTTTAATGTGGCGG+AGG + chr7_1:20737249-20737268 Msa1013780:CDS 35.0%
!! TTCTGAGATGAATAATGAGG+AGG + chr7_1:20737309-20737328 Msa1013780:intron 35.0%
! TTCTACTACCTTTGAGAAGA+AGG + chr7_1:20737402-20737421 Msa1013780:CDS 35.0%
! TCTACTACCTTTGAGAAGAA+GGG + chr7_1:20737403-20737422 Msa1013780:CDS 35.0%
! TTTATCCCTTTCTTTGGCTT+TGG - chr7_1:20737512-20737531 None:intergenic 35.0%
CGAAGATTCACAGTTTCATT+AGG - chr7_1:20737535-20737554 None:intergenic 35.0%
!! TTTGACTTGGGATTTGCATT+TGG - chr7_1:20737581-20737600 None:intergenic 35.0%
CATTGTCTTTGGATTTGACT+TGG - chr7_1:20737594-20737613 None:intergenic 35.0%
! ACTTTCATTAGGTTTGGCTT+TGG - chr7_1:20737617-20737636 None:intergenic 35.0%
ATCCACACTTTCATTAGGTT+TGG - chr7_1:20737623-20737642 None:intergenic 35.0%
ATGTCAAGGGTTTAGATGTT+GGG + chr7_1:20737671-20737690 Msa1013780:CDS 35.0%
GGAATCACGTAAACAGAAAA+TGG + chr7_1:20737732-20737751 Msa1013780:intron 35.0%
ATCACGTAAACAGAAAATGG+TGG + chr7_1:20737735-20737754 Msa1013780:intron 35.0%
CATCCATGTTGAGAAGAATA+AGG + chr7_1:20737777-20737796 Msa1013780:CDS 35.0%
CACAGTTGAATCATTCTTCA+TGG - chr7_1:20737902-20737921 None:intergenic 35.0%
CTTAAAATGGAGGATTACCA+TGG - chr7_1:20738109-20738128 None:intergenic 35.0%
! GTGTGTTACTATCTACAGAT+TGG + chr7_1:20738267-20738286 Msa1013780:intron 35.0%
GGTGTATATTGCAAATTGTG+TGG + chr7_1:20738378-20738397 Msa1013780:CDS 35.0%
ATATTGCAAATTGTGTGGTG+TGG + chr7_1:20738383-20738402 Msa1013780:CDS 35.0%
CAAATATATCTCACCACTAG+TGG + chr7_1:20738419-20738438 Msa1013780:CDS 35.0%
!! CCACTTTTGATTGCATTATG+CGG + chr7_1:20738522-20738541 Msa1013780:intron 35.0%
!! GGAAGAAAAGCATCATTTGA+TGG + chr7_1:20738802-20738821 Msa1013780:CDS 35.0%
TTCATTTGGAAAAACTTGGC+AGG + chr7_1:20738973-20738992 Msa1013780:CDS 35.0%
ATATGCCTTGAGAAACACTA+TGG - chr7_1:20739094-20739113 None:intergenic 35.0%
ACAATAATCGGCAAGCATTT+GGG - chr7_1:20739129-20739148 None:intergenic 35.0%
CAAGTTAGTAGTATACTAGC+AGG - chr7_1:20739156-20739175 None:intergenic 35.0%
CTGCTAGTATACTACTAACT+TGG + chr7_1:20739154-20739173 Msa1013780:CDS 35.0%
TAGTATACTACTAACTTGGG+AGG + chr7_1:20739158-20739177 Msa1013780:CDS 35.0%
GGAGGATGAATTCAAGAAAT+GGG + chr7_1:20739176-20739195 Msa1013780:CDS 35.0%
GAATTCAAGAAATGGGACAT+CGG + chr7_1:20739183-20739202 Msa1013780:CDS 35.0%
TGTTCTTTACCAGATAACTC+GGG - chr7_1:20739234-20739253 None:intergenic 35.0%
TAATATTCATGAAACGCGGA+TGG + chr7_1:20739296-20739315 Msa1013780:CDS 35.0%
! GGAATCAGCTACAATTTGTT+TGG + chr7_1:20739357-20739376 Msa1013780:CDS 35.0%
GAAAATGTGAAGGAGAGAAA+AGG + chr7_1:20739408-20739427 Msa1013780:CDS 35.0%
AAGATTCTTCTTAAAGCTCC+TGG + chr7_1:20739447-20739466 Msa1013780:CDS 35.0%
! TCATCTAGAACTAACAAACC+AGG - chr7_1:20739468-20739487 None:intergenic 35.0%
!! GGTTTGTTAGTTCTAGATGA+AGG + chr7_1:20739468-20739487 Msa1013780:CDS 35.0%
TCCATTCCAGAACAATTTCT+GGG + chr7_1:20739575-20739594 Msa1013780:CDS 35.0%
!!! CAAAAACTTTTTAGCTCAGG+CGG - chr7_1:20739651-20739670 None:intergenic 35.0%
!!! TGGCAAAAACTTTTTAGCTC+AGG - chr7_1:20739654-20739673 None:intergenic 35.0%
ATGATTTATGTCCCTGCTTA+TGG - chr7_1:20739674-20739693 None:intergenic 35.0%
ATCCTTGAAAATAAGCTTCC+AGG + chr7_1:20739810-20739829 Msa1013780:CDS 35.0%
TCCTTGAAAATAAGCTTCCA+GGG + chr7_1:20739811-20739830 Msa1013780:CDS 35.0%
AAAATAAGCTTCCAGGGTTA+AGG + chr7_1:20739817-20739836 Msa1013780:CDS 35.0%
AAATAAGCTTCCAGGGTTAA+GGG + chr7_1:20739818-20739837 Msa1013780:CDS 35.0%
! ATTGTAAAGGAGCATGGAAT+TGG - chr7_1:20740127-20740146 None:intergenic 35.0%
TCTGCGACACAAAGTTTAAT+TGG - chr7_1:20740160-20740179 None:intergenic 35.0%
GAGGTGAAAAGTGATGAAAG+TGG + chr7_1:20736686-20736705 Msa1013780:CDS 40.0%
! TTGTCGAAGAAAAGTGTGGT+TGG + chr7_1:20736735-20736754 Msa1013780:CDS 40.0%
TCAGATGAAGAACACTCTGT+TGG + chr7_1:20736785-20736804 Msa1013780:CDS 40.0%
AAACAGGGAGAAAAAAGTGG+AGG + chr7_1:20736854-20736873 Msa1013780:intron 40.0%
GATGAAGAACAGTACTCTGT+TGG + chr7_1:20736938-20736957 Msa1013780:CDS 40.0%
GTTAAAGAGGGAGCAAAAAG+TGG + chr7_1:20736998-20737017 Msa1013780:CDS 40.0%
AGAAAATGAGACTAGCGATG+AGG + chr7_1:20737120-20737139 Msa1013780:CDS 40.0%
!! TCTGGCTCTCCTTATAATGA+TGG + chr7_1:20737196-20737215 Msa1013780:CDS 40.0%
GAGAAAGAGAAGAAAAAGGG+TGG + chr7_1:20737223-20737242 Msa1013780:CDS 40.0%
GAGACGAATGATAAACACAG+TGG + chr7_1:20737283-20737302 Msa1013780:intron 40.0%
GATGAATAATGAGGAGGTGA+AGG + chr7_1:20737315-20737334 Msa1013780:intron 40.0%
! GAAGTGGAGCATTCAGATTA+TGG + chr7_1:20737367-20737386 Msa1013780:CDS 40.0%
AGAAGAACCCTTCTTCTCAA+AGG - chr7_1:20737413-20737432 None:intergenic 40.0%
TTGTTGCCAAAGCCAAAGAA+AGG + chr7_1:20737503-20737522 Msa1013780:CDS 40.0%
TGTTGCCAAAGCCAAAGAAA+GGG + chr7_1:20737504-20737523 Msa1013780:CDS 40.0%
!! TTTGGCTTTGGCATTGTCTT+TGG - chr7_1:20737605-20737624 None:intergenic 40.0%
AGCCAAACCTAATGAAAGTG+TGG + chr7_1:20737618-20737637 Msa1013780:CDS 40.0%
GCAACATCCACACTTTCATT+AGG - chr7_1:20737628-20737647 None:intergenic 40.0%
!! GATGTTGCTGATTCTAGTGA+AGG + chr7_1:20737640-20737659 Msa1013780:CDS 40.0%
! TGAAGGAAAAGAGCATGTCA+AGG + chr7_1:20737657-20737676 Msa1013780:CDS 40.0%
! GAAGGAAAAGAGCATGTCAA+GGG + chr7_1:20737658-20737677 Msa1013780:CDS 40.0%
CATGTCAAGGGTTTAGATGT+TGG + chr7_1:20737670-20737689 Msa1013780:CDS 40.0%
TGTCAAGGGTTTAGATGTTG+GGG + chr7_1:20737672-20737691 Msa1013780:CDS 40.0%
! CAGAAAATGGTGGAGAACAA+AGG + chr7_1:20737745-20737764 Msa1013780:intron 40.0%
! AAGCACACATTTTATGCGGA+AGG + chr7_1:20737837-20737856 Msa1013780:CDS 40.0%
TGCTCCTTGCTAAATGCTAT+TGG + chr7_1:20737863-20737882 Msa1013780:CDS 40.0%
GCTCCTTGCTAAATGCTATT+GGG + chr7_1:20737864-20737883 Msa1013780:CDS 40.0%
TGTCCCAATAGCATTTAGCA+AGG - chr7_1:20737870-20737889 None:intergenic 40.0%
! TTCAACTGTGTTCGAGTTCA+AGG + chr7_1:20737912-20737931 Msa1013780:CDS 40.0%
TCTTAAGGCTCCATATCGAT+GGG - chr7_1:20737993-20738012 None:intergenic 40.0%
TTCTTAAGGCTCCATATCGA+TGG - chr7_1:20737994-20738013 None:intergenic 40.0%
ATCGATATGGAGCCTTAAGA+AGG + chr7_1:20737993-20738012 Msa1013780:intron 40.0%
!!! GCACTTTTTCCACCTTCTTA+AGG - chr7_1:20738008-20738027 None:intergenic 40.0%
! GGAAAAAGTGCAAAAGACCA+TGG + chr7_1:20738017-20738036 Msa1013780:CDS 40.0%
! AAAAGTGCAAAAGACCATGG+AGG + chr7_1:20738020-20738039 Msa1013780:CDS 40.0%
! CGAAGTGTTATGGGATGAAT+TGG + chr7_1:20738053-20738072 Msa1013780:CDS 40.0%
! ACTTTTCTCGACGAAGAGAT+TGG + chr7_1:20738357-20738376 Msa1013780:CDS 40.0%
CCGCATAATGCAATCAAAAG+TGG - chr7_1:20738525-20738544 None:intergenic 40.0%
! GTTGATAGATTTCCCTGTGA+AGG + chr7_1:20738775-20738794 Msa1013780:CDS 40.0%
TTTCTTCCTGAACCTTCACA+GGG - chr7_1:20738790-20738809 None:intergenic 40.0%
! TTTTCTTCCTGAACCTTCAC+AGG - chr7_1:20738791-20738810 None:intergenic 40.0%
! TTGCAATGAAGGCACAGTTT+GGG + chr7_1:20738894-20738913 Msa1013780:CDS 40.0%
TCAAAGCCTTCTTGTTGATG+AGG - chr7_1:20738952-20738971 None:intergenic 40.0%
! TGCATTATTTCTCATGCTCC+TGG + chr7_1:20739048-20739067 Msa1013780:CDS 40.0%
GACAATAATCGGCAAGCATT+TGG - chr7_1:20739130-20739149 None:intergenic 40.0%
GGGAGGATGAATTCAAGAAA+TGG + chr7_1:20739175-20739194 Msa1013780:CDS 40.0%
TTAAGCAATCCCGAGTTATC+TGG + chr7_1:20739222-20739241 Msa1013780:CDS 40.0%
TGGTAAAGAACATGCTGATG+CGG + chr7_1:20739242-20739261 Msa1013780:CDS 40.0%
ATGCGGTTGAAACGTTTGAT+TGG + chr7_1:20739259-20739278 Msa1013780:CDS 40.0%
GGATGGCAAAAATGATTTCG+TGG + chr7_1:20739313-20739332 Msa1013780:CDS 40.0%
CAGAAACGAATCATCCTTTC+CGG + chr7_1:20739549-20739568 Msa1013780:CDS 40.0%
!! ATTGTTCTGGAATGGAGTTC+CGG - chr7_1:20739571-20739590 None:intergenic 40.0%
CTCCATTCCAGAACAATTTC+TGG + chr7_1:20739574-20739593 Msa1013780:CDS 40.0%
!! TCCCAGAAATTGTTCTGGAA+TGG - chr7_1:20739579-20739598 None:intergenic 40.0%
AAAGCTCCCAGAAATTGTTC+TGG - chr7_1:20739584-20739603 None:intergenic 40.0%
AGAACGCTTCACTAAGCTTA+AGG - chr7_1:20739613-20739632 None:intergenic 40.0%
TCGTGATCTTATCATCGGAA+GGG - chr7_1:20739743-20739762 None:intergenic 40.0%
!! ACCCTGGAAGCTTATTTTCA+AGG - chr7_1:20739815-20739834 None:intergenic 40.0%
ATTCAAGGAAAAGCGATGGA+TGG - chr7_1:20739956-20739975 None:intergenic 40.0%
GAACATTCAAGGAAAAGCGA+TGG - chr7_1:20739960-20739979 None:intergenic 40.0%
CTTCCGAAAGAGAACATTCA+AGG - chr7_1:20739971-20739990 None:intergenic 40.0%
AGAAGAATCTGCTCTTGACA+AGG + chr7_1:20739992-20740011 Msa1013780:CDS 40.0%
CTTAGACTGAACCCATATGA+AGG + chr7_1:20740029-20740048 Msa1013780:CDS 40.0%
! GAAAAGTGTGGTTGGACACT+TGG + chr7_1:20736743-20736762 Msa1013780:CDS 45.0%
!! GAACAGTACTCTGTTGGTTC+TGG + chr7_1:20736944-20736963 Msa1013780:CDS 45.0%
AAAGAGGGAGCAAAAAGTGG+AGG + chr7_1:20737001-20737020 Msa1013780:CDS 45.0%
! CTTTAATGTGGCGGAGGAAT+TGG + chr7_1:20737255-20737274 Msa1013780:CDS 45.0%
GTCAAGGGTTTAGATGTTGG+GGG + chr7_1:20737673-20737692 Msa1013780:CDS 45.0%
AGATGTTGGGGGAGTTTCTT+TGG + chr7_1:20737684-20737703 Msa1013780:CDS 45.0%
! AACTGTGTTCGAGTTCAAGG+AGG + chr7_1:20737915-20737934 Msa1013780:CDS 45.0%
TTAAGGCTCCATATCGATGG+GGG - chr7_1:20737991-20738010 None:intergenic 45.0%
CTTAAGGCTCCATATCGATG+GGG - chr7_1:20737992-20738011 None:intergenic 45.0%
GATATGGAGCCTTAAGAAGG+TGG + chr7_1:20737996-20738015 Msa1013780:intron 45.0%
! AGGAGGAGAACGAAGTGTTA+TGG + chr7_1:20738043-20738062 Msa1013780:CDS 45.0%
! GGAGGAGAACGAAGTGTTAT+GGG + chr7_1:20738044-20738063 Msa1013780:CDS 45.0%
AGAATCTGACGCTGTATCCA+TGG + chr7_1:20738089-20738108 Msa1013780:CDS 45.0%
TCGTGTTCACATCGAGATGA+TGG - chr7_1:20738336-20738355 None:intergenic 45.0%
GCGGCTAATGCAGTACTATT+TGG + chr7_1:20738572-20738591 Msa1013780:intron 45.0%
AGATTTCCCTGTGAAGGTTC+AGG + chr7_1:20738781-20738800 Msa1013780:CDS 45.0%
! CTTGCAATGAAGGCACAGTT+TGG + chr7_1:20738893-20738912 Msa1013780:CDS 45.0%
ATTTCTCATGCTCCTGGAAC+CGG + chr7_1:20739054-20739073 Msa1013780:CDS 45.0%
! TATGGTCAGCCTTGTCTTTC+CGG - chr7_1:20739076-20739095 None:intergenic 45.0%
GCTGACCATAGTGTTTCTCA+AGG + chr7_1:20739086-20739105 Msa1013780:CDS 45.0%
AATCGGCAAGCATTTGGGAA+AGG - chr7_1:20739124-20739143 None:intergenic 45.0%
CTAGCAGGAGCGACAATAAT+CGG - chr7_1:20739141-20739160 None:intergenic 45.0%
TCGTTTCTGCGCTTGAATCT+TGG - chr7_1:20739538-20739557 None:intergenic 45.0%
! TTTGTTGTGTTGCCCGAAAC+AGG - chr7_1:20739717-20739736 None:intergenic 45.0%
CTCGTGATCTTATCATCGGA+AGG - chr7_1:20739744-20739763 None:intergenic 45.0%
CTTCCGATGATAAGATCACG+AGG + chr7_1:20739742-20739761 Msa1013780:CDS 45.0%
CAGCCTCGTGATCTTATCAT+CGG - chr7_1:20739748-20739767 None:intergenic 45.0%
CACGAGGCTGAAATTGCTAA+TGG + chr7_1:20739758-20739777 Msa1013780:CDS 45.0%
CCTTTGTGCACGTGAACAAA+GGG - chr7_1:20739786-20739805 None:intergenic 45.0%
CCTTTGTTCACGTGCACAAA+GGG + chr7_1:20739784-20739803 Msa1013780:CDS 45.0%
CTTTGTTCACGTGCACAAAG+GGG + chr7_1:20739785-20739804 Msa1013780:CDS 45.0%
! GGACTGTTTGGTGACTTTGA+AGG + chr7_1:20739839-20739858 Msa1013780:CDS 45.0%
! TGTTTGGTGACTTTGAAGGC+AGG + chr7_1:20739843-20739862 Msa1013780:CDS 45.0%
AAGGAAAAGCGATGGATGGA+CGG - chr7_1:20739952-20739971 None:intergenic 45.0%
GGCGAGTTTGATGCTGAAGA+TGG + chr7_1:20736707-20736726 Msa1013780:CDS 50.0%
CAGGGAGAAAAAAGTGGAGG+AGG + chr7_1:20736857-20736876 Msa1013780:intron 50.0%
GGAGCAAAAAGTGGAGGAAG+CGG + chr7_1:20737007-20737026 Msa1013780:CDS 50.0%
! GTGTTCGAGTTCAAGGAGGA+TGG + chr7_1:20737919-20737938 Msa1013780:CDS 50.0%
AGTGCAAAAGACCATGGAGG+AGG + chr7_1:20738023-20738042 Msa1013780:CDS 50.0%
CTCACCACTAGTGGTAAGCA+CGG + chr7_1:20738428-20738447 Msa1013780:intron 50.0%
GAAACCGTGCTTACCACTAG+TGG - chr7_1:20738435-20738454 None:intergenic 50.0%
!!! ACTTGTTTTGCACGTGACGC+AGG + chr7_1:20738753-20738772 Msa1013780:intron 50.0%
AATGCCGATCCTTGCAGTGA+AGG + chr7_1:20739021-20739040 Msa1013780:CDS 50.0%
! TCTGGAATGGAGTTCCGGAA+AGG - chr7_1:20739566-20739585 None:intergenic 50.0%
GCGGAGTTGTGAACCTGTTT+CGG + chr7_1:20739701-20739720 Msa1013780:CDS 50.0%
CGGAGTTGTGAACCTGTTTC+GGG + chr7_1:20739702-20739721 Msa1013780:CDS 50.0%
CCCTTTGTTCACGTGCACAA+AGG + chr7_1:20739783-20739802 Msa1013780:CDS 50.0%
CCCTTTGTGCACGTGAACAA+AGG - chr7_1:20739787-20739806 None:intergenic 50.0%
TCCAGGGTTAAGGGACTGTT+TGG + chr7_1:20739827-20739846 Msa1013780:CDS 50.0%
ACCAAACAGTCCCTTAACCC+TGG - chr7_1:20739831-20739850 None:intergenic 50.0%
TGCTCTTGACAAGGATCAGC+TGG + chr7_1:20740001-20740020 Msa1013780:CDS 50.0%
ACAAGATACACAGCCACCGC+TGG + chr7_1:20737951-20737970 Msa1013780:CDS 55.0%
GGTGTCTCCACAGAAACCAG+CGG - chr7_1:20737970-20737989 None:intergenic 55.0%
TGGAGACACCCCCATCGATA+TGG + chr7_1:20737980-20737999 Msa1013780:intron 55.0%
GCAAAAGACCATGGAGGAGG+AGG + chr7_1:20738026-20738045 Msa1013780:CDS 55.0%
TTCGTTCTCCTCCTCCTCCA+TGG - chr7_1:20738037-20738056 None:intergenic 55.0%
GCCACCTTCACTGCAAGGAT+CGG - chr7_1:20739028-20739047 None:intergenic 55.0%
ATGCAGCCACCTTCACTGCA+AGG - chr7_1:20739033-20739052 None:intergenic 55.0%
CTCCTGGAACCGGAAAGACA+AGG + chr7_1:20739064-20739083 Msa1013780:CDS 55.0%
! AGCCTTGTCTTTCCGGTTCC+AGG - chr7_1:20739069-20739088 None:intergenic 55.0%
AGCTCAGGCGGTATCGTGTT+AGG - chr7_1:20739639-20739658 None:intergenic 55.0%
!! ACAGCCACCGCTGGTTTCTG+TGG + chr7_1:20737960-20737979 Msa1013780:intron 60.0%
GTCTCCACAGAAACCAGCGG+TGG - chr7_1:20737967-20737986 None:intergenic 60.0%
GCCGATCCTTGCAGTGAAGG+TGG + chr7_1:20739024-20739043 Msa1013780:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 20736656 20740196 20736656 ID=Msa1013780;Name=Msa1013780
chr7_1 mRNA 20736656 20740196 20736656 ID=Msa1013780-mRNA-1;Parent=Msa1013780;Name=Msa1013780-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|0.25|0.22|9|0|956
chr7_1 exon 20736656 20736850 20736656 ID=Msa1013780-mRNA-1:exon:4986;Parent=Msa1013780-mRNA-1
chr7_1 exon 20736860 20737028 20736860 ID=Msa1013780-mRNA-1:exon:4987;Parent=Msa1013780-mRNA-1
chr7_1 exon 20737047 20737276 20737047 ID=Msa1013780-mRNA-1:exon:4988;Parent=Msa1013780-mRNA-1
chr7_1 exon 20737331 20737565 20737331 ID=Msa1013780-mRNA-1:exon:4989;Parent=Msa1013780-mRNA-1
chr7_1 exon 20737578 20737739 20737578 ID=Msa1013780-mRNA-1:exon:4990;Parent=Msa1013780-mRNA-1
chr7_1 exon 20737767 20737972 20737767 ID=Msa1013780-mRNA-1:exon:4991;Parent=Msa1013780-mRNA-1
chr7_1 exon 20738015 20738110 20738015 ID=Msa1013780-mRNA-1:exon:4992;Parent=Msa1013780-mRNA-1
chr7_1 exon 20738285 20738440 20738285 ID=Msa1013780-mRNA-1:exon:4993;Parent=Msa1013780-mRNA-1
chr7_1 exon 20738775 20740196 20738775 ID=Msa1013780-mRNA-1:exon:4994;Parent=Msa1013780-mRNA-1
chr7_1 CDS 20736656 20736850 20736656 ID=Msa1013780-mRNA-1:cds;Parent=Msa1013780-mRNA-1
chr7_1 CDS 20736860 20737028 20736860 ID=Msa1013780-mRNA-1:cds;Parent=Msa1013780-mRNA-1
chr7_1 CDS 20737047 20737276 20737047 ID=Msa1013780-mRNA-1:cds;Parent=Msa1013780-mRNA-1
chr7_1 CDS 20737331 20737565 20737331 ID=Msa1013780-mRNA-1:cds;Parent=Msa1013780-mRNA-1
chr7_1 CDS 20737578 20737739 20737578 ID=Msa1013780-mRNA-1:cds;Parent=Msa1013780-mRNA-1
chr7_1 CDS 20737767 20737972 20737767 ID=Msa1013780-mRNA-1:cds;Parent=Msa1013780-mRNA-1
chr7_1 CDS 20738015 20738110 20738015 ID=Msa1013780-mRNA-1:cds;Parent=Msa1013780-mRNA-1
chr7_1 CDS 20738285 20738440 20738285 ID=Msa1013780-mRNA-1:cds;Parent=Msa1013780-mRNA-1
chr7_1 CDS 20738775 20740196 20738775 ID=Msa1013780-mRNA-1:cds;Parent=Msa1013780-mRNA-1
Gene Sequence

>Msa1013780

ATGTTTGAGGGTGATTATGATGTTAAAAAGGAGGTGAAAAGTGATGAAAGTGGCGAGTTTGATGCTGAAGATGGAAACTTTGTCGAAGAAAAGTGTGGTTGGACACTTGGAAACCCGATTACAATACATTCAGATGAAGAACACTCTGTTGGTTCTGATTCTAATGATGAAGAAGAAGAAGAACATGATGATAATGGAGAAAAAAGTGGAGGAGGCGATGAGTCTGCTGATAAAGATATTTTTTTTGTAGATTTGGATGATTCTGATGAGAGTGATGAAGAACAGTACTCTGTTGGTTCTGGTTCTGATTCAGATTCTAATTCTGATGATGATGTTAAAGAGGGAGCAAAAAGTGGAGGAAGCGATGATTTTTTTGTTGATTTGGATGATTATGGTGAGAGTGATGAAGAACACTGTTTTGATTCCGATGAAAGTGAAGAAAATGAGACTAGCGATGAGGAATTTAGAGTTGATGAGCTGAATGAGATTTCTGACAATGATGATGATAGTTCTTCTGGCTCTCCTTATAATGATGGTAAGGAGAAAGAGAAGAAAAAGGGTGGGCGAAAATACTTTAATGTGGCGGAGGAATTGGTGAAGGATAAAAGTCCTTCTTCTGTAAACAATGATGAAGTGGAGCATTCAGATTATGGTAGTGTAGCAACTTCTACTACCTTTGAGAAGAAGGGTTCTTCTTCAAACAAGAATGATACATCAAAGAAACAAAAAGCAAAAAGTGTGGAAAATGTTTCTGATAATGATGTAATTGTTGCCAAAGCCAAAGAAAGGGATAAACCTAATGAAACTGTGAATCTTCGTGATGATGTTACCAAATGCAAATCCCAAGTCAAATCCAAAGACAATGCCAAAGCCAAACCTAATGAAAGTGTGGATGTTGCTGATTCTAGTGAAGGAAAAGAGCATGTCAAGGGTTTAGATGTTGGGGGAGTTTCTTTGGTTCAAACAAAGCAAGAAATGATGAAGGAATCACGTATAGCTAACATCCATGTTGAGAAGAATAAGGAATCTATTGATAACAATGGTTTGATACAAAGCGTCAAAAGCACACATTTTATGCGGAAGGAGTTGCTCCTTGCTAAATGCTATTGGGACAGAAAGAATACCATGAAGAATGATTCAACTGTGTTCGAGTTCAAGGAGGATGGCGTTGATCGACAAGATACACAGCCACCGCTGGTGGAAAAAGTGCAAAAGACCATGGAGGAGGAGGAGAACGAAGTGTTATGGGATGAATTGGATACAATTCTTAGAGAATCTGACGCTGTATCCATGATTGGAAATTTAGGGACAAATGAAGCTACAAAAATAAAAAGCGGAAGTCCATCATCTCGATGTGAACACGACACTTTTCTCGACGAAGAGATTGGTGTATATTGCAAATTGTGTGGTGTGGTTATTACTGAGATCAAATATATCTCACCACTAGTGGTTGATAGATTTCCCTGTGAAGGTTCAGGAAGAAAAGCATCATTTGATGGAGTAAATGTTTCACTGTTTGATGGATCTCAATTCAATGTTTATGATAAAGATTCAGAAACTAATTTCTCTTGCAATGAAGGCACAGTTTGGGACCTAATTCCAGATTTGAAACAAACTTTATATCCTCATCAACAAGAAGGCTTTGAATTCATTTGGAAAAACTTGGCAGGAAGCGTCAAGCTTCAAAAGTTAAAGAATGCCGATCCTTGCAGTGAAGGTGGCTGCATTATTTCTCATGCTCCTGGAACCGGAAAGACAAGGCTGACCATAGTGTTTCTCAAGGCATATTTGAAAGCCTTTCCCAAATGCTTGCCGATTATTGTCGCTCCTGCTAGTATACTACTAACTTGGGAGGATGAATTCAAGAAATGGGACATCGGAGTTCCATTTCACAATTTAAGCAATCCCGAGTTATCTGGTAAAGAACATGCTGATGCGGTTGAAACGTTTGATTGGTATAATACACAGCATAATATTCATGAAACGCGGATGGCAAAAATGATTTCGTGGTTCAAAGAAACAAGCATTCTTGGAATCAGCTACAATTTGTTTGGAAAAAAATGCCAAGATAAGAAAAAGCATGAAAATGTGAAGGAGAGAAAAGGAAACTGTGATATGCGAAAGATTCTTCTTAAAGCTCCTGGTTTGTTAGTTCTAGATGAAGGACACACACCAAGAAATCAAAGAAGTCATATTTGGAAGGTGTTGTCCAAGATTCAAGCGCAGAAACGAATCATCCTTTCCGGAACTCCATTCCAGAACAATTTCTGGGAGCTTTACAGCACCTTAAGCTTAGTGAAGCGTTCTTTTCCTAACACGATACCGCCTGAGCTAAAAAGTTTTTGCCATAAGCAGGGACATAAATCATCTAAAAAGCGGAGTTGTGAACCTGTTTCGGGCAACACAACAAAAGACCCTTCCGATGATAAGATCACGAGGCTGAAATTGCTAATGGATCCCTTTGTTCACGTGCACAAAGGGGCGATCCTTGAAAATAAGCTTCCAGGGTTAAGGGACTGTTTGGTGACTTTGAAGGCAGGTAGTTTGCAGAATGAAATTCTGAAGAGCATTAAACATTCTAAGAACACAATATTTAACTTTGAACGTAAGATAGCATTGACATCCGTCCATCCATCGCTTTTCCTTGAATGTTCTCTTTCGGAAGAAGAAGAATCTGCTCTTGACAAGGATCAGCTGGAAAAGCTTAGACTGAACCCATATGAAGGTGTCAAAACAAAATTTTTGTTCGAGTTTGTTCGGCTATGCGATGCTTTTCACGAGAAAGTTCTTGTGTTCAGCCAATTCCATGCTCCTTTACAATTAATTAAAGACCAATTAAACTTTGTGTCGCAGAATCAAAATATTAATTAG
Protein sequence

>Msa1013780

MFEGDYDVKKEVKSDESGEFDAEDGNFVEEKCGWTLGNPITIHSDEEHSVGSDSNDEEEEEHDDNGEKSGGGDESADKDIFFVDLDDSDESDEEQYSVGSGSDSDSNSDDDVKEGAKSGGSDDFFVDLDDYGESDEEHCFDSDESEENETSDEEFRVDELNEISDNDDDSSSGSPYNDGKEKEKKKGGRKYFNVAEELVKDKSPSSVNNDEVEHSDYGSVATSTTFEKKGSSSNKNDTSKKQKAKSVENVSDNDVIVAKAKERDKPNETVNLRDDVTKCKSQVKSKDNAKAKPNESVDVADSSEGKEHVKGLDVGGVSLVQTKQEMMKESRIANIHVEKNKESIDNNGLIQSVKSTHFMRKELLLAKCYWDRKNTMKNDSTVFEFKEDGVDRQDTQPPLVEKVQKTMEEEENEVLWDELDTILRESDAVSMIGNLGTNEATKIKSGSPSSRCEHDTFLDEEIGVYCKLCGVVITEIKYISPLVVDRFPCEGSGRKASFDGVNVSLFDGSQFNVYDKDSETNFSCNEGTVWDLIPDLKQTLYPHQQEGFEFIWKNLAGSVKLQKLKNADPCSEGGCIISHAPGTGKTRLTIVFLKAYLKAFPKCLPIIVAPASILLTWEDEFKKWDIGVPFHNLSNPELSGKEHADAVETFDWYNTQHNIHETRMAKMISWFKETSILGISYNLFGKKCQDKKKHENVKERKGNCDMRKILLKAPGLLVLDEGHTPRNQRSHIWKVLSKIQAQKRIILSGTPFQNNFWELYSTLSLVKRSFPNTIPPELKSFCHKQGHKSSKKRSCEPVSGNTTKDPSDDKITRLKLLMDPFVHVHKGAILENKLPGLRDCLVTLKAGSLQNEILKSIKHSKNTIFNFERKIALTSVHPSLFLECSLSEEEESALDKDQLEKLRLNPYEGVKTKFLFEFVRLCDAFHEKVLVFSQFHAPLQLIKDQLNFVSQNQNIN*