Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014160 | MCH82909.1 | 61.212 | 165 | 63 | 1 | 18 | 182 | 4 | 167 | 6.19e-62 | 210 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014160 | sp|Q6NQJ7|FRS4_ARATH | 36.792 | 106 | 64 | 2 | 48 | 151 | 3 | 107 | 7.62e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014160 | A0A392M6P6 | 61.212 | 165 | 63 | 1 | 18 | 182 | 4 | 167 | 2.96e-62 | 210 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1014160 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014160 | MtrunA17_Chr2g0296781 | 66.667 | 135 | 45 | 0 | 48 | 182 | 3 | 137 | 1.51e-55 | 190 |
| Msa1014160 | MtrunA17_Chr1g0196541 | 47.368 | 171 | 88 | 1 | 48 | 216 | 3 | 173 | 3.60e-43 | 155 |
| Msa1014160 | MtrunA17_Chr6g0476431 | 61.628 | 86 | 33 | 0 | 48 | 133 | 3 | 88 | 3.97e-33 | 116 |
| Msa1014160 | MtrunA17_Chr6g0451441 | 32.022 | 178 | 111 | 5 | 10 | 181 | 52 | 225 | 5.43e-18 | 83.2 |
| Msa1014160 | MtrunA17_Chr2g0329031 | 34.167 | 120 | 71 | 3 | 48 | 160 | 20 | 138 | 5.44e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1014160 | AT1G76320.2 | 36.792 | 106 | 64 | 2 | 48 | 151 | 3 | 107 | 7.46e-15 | 74.7 |
| Msa1014160 | AT1G76320.1 | 36.792 | 106 | 64 | 2 | 48 | 151 | 3 | 107 | 7.75e-15 | 74.3 |
| Msa1014160 | AT1G76320.4 | 36.792 | 106 | 64 | 2 | 48 | 151 | 3 | 107 | 7.75e-15 | 74.3 |
| Msa1014160 | AT1G76320.3 | 36.792 | 106 | 64 | 2 | 48 | 151 | 3 | 107 | 1.19e-14 | 73.9 |
Find 28 sgRNAs with CRISPR-Local
Find 126 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTCATAAGCATTGAATT+TGG | 0.196629 | 7_1:+22187327 | None:intergenic |
| AATGCATGTATTTCTTTAGA+TGG | 0.249459 | 7_1:-22187730 | Msa1014160:CDS |
| CTAAAATAGCGTGCTTTGTC+AGG | 0.272247 | 7_1:+22187658 | None:intergenic |
| TATGCCCAATCGATGGGTTT+TGG | 0.287180 | 7_1:-22187898 | Msa1014160:CDS |
| TACCTGTAACAATTCAAAAT+AGG | 0.377069 | 7_1:+22187175 | None:intergenic |
| TGCATGACTTGAGAATAAAA+TGG | 0.407764 | 7_1:+22187209 | None:intergenic |
| GCTTATGAGTGAAGTAAATC+AGG | 0.434328 | 7_1:-22187316 | Msa1014160:intron |
| AAGCATTGAATTTGGATTGA+AGG | 0.439628 | 7_1:+22187335 | None:intergenic |
| AGCATTGAATTTGGATTGAA+GGG | 0.452863 | 7_1:+22187336 | None:intergenic |
| CATTCAATCTAGCCTTGCAT+TGG | 0.455682 | 7_1:+22187749 | None:intergenic |
| GTTCAAGTAGTTGATGTAGT+TGG | 0.457215 | 7_1:-22187532 | Msa1014160:CDS |
| AACTCCAAAACCCATCGATT+GGG | 0.481007 | 7_1:+22187894 | None:intergenic |
| ATTCAATCTAGCCTTGCATT+GGG | 0.485892 | 7_1:+22187750 | None:intergenic |
| TAACTCCAAAACCCATCGAT+TGG | 0.508337 | 7_1:+22187893 | None:intergenic |
| CAAGAGTTATGCCCAATCGA+TGG | 0.518094 | 7_1:-22187905 | Msa1014160:CDS |
| ATTTGTATCTTCTGATGAAG+AGG | 0.520293 | 7_1:-22188046 | Msa1014160:CDS |
| TATTCTCAAGTCATGCATCA+TGG | 0.520944 | 7_1:-22187203 | Msa1014160:CDS |
| AAGAGTTATGCCCAATCGAT+GGG | 0.531992 | 7_1:-22187904 | Msa1014160:CDS |
| TGGTTCCTCGTTTGAAAAGG+AGG | 0.532707 | 7_1:-22187621 | Msa1014160:CDS |
| TAAAATAGCGTGCTTTGTCA+GGG | 0.562727 | 7_1:+22187659 | None:intergenic |
| TTAGAACTCAATGATCAAGC+TGG | 0.567016 | 7_1:-22187598 | Msa1014160:CDS |
| TTTACTCTAGCATGTAGTTG+TGG | 0.583557 | 7_1:-22187829 | Msa1014160:CDS |
| CGTGTTATTGATGACGACAA+CGG | 0.597290 | 7_1:+22187044 | None:intergenic |
| GATGAAGAGGAAATCAGAGA+GGG | 0.625109 | 7_1:-22188033 | Msa1014160:CDS |
| CTAAATATAGTTCCAACCTG+AGG | 0.648571 | 7_1:+22187955 | None:intergenic |
| TTTGGGAGGAATGGACATGG+TGG | 0.651520 | 7_1:-22187375 | Msa1014160:CDS |
| TGATGAAGAGGAAATCAGAG+AGG | 0.679814 | 7_1:-22188034 | Msa1014160:CDS |
| ACGACAACGGATCATTCACA+TGG | 0.697567 | 7_1:+22187057 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTGATTTATCATATAA+AGG | + | chr7_1:22187116-22187135 | None:intergenic | 10.0% |
| !!! | TTTAATACATATATGTTTTT+AGG | - | chr7_1:22187914-22187933 | Msa1014160:CDS | 10.0% |
| !!! | TTAATACATATATGTTTTTA+GGG | - | chr7_1:22187915-22187934 | Msa1014160:CDS | 10.0% |
| !!! | AAAATTGATTTATCATATAA+AGG | + | chr7_1:22187116-22187135 | None:intergenic | 10.0% |
| !!! | TTTAATACATATATGTTTTT+AGG | - | chr7_1:22187914-22187933 | Msa1014160:CDS | 10.0% |
| !!! | TTAATACATATATGTTTTTA+GGG | - | chr7_1:22187915-22187934 | Msa1014160:CDS | 10.0% |
| !!! | TTTTTAATTTATTGCATTAG+TGG | - | chr7_1:22187250-22187269 | Msa1014160:intron | 15.0% |
| !!! | TAATACATATATGTTTTTAG+GGG | - | chr7_1:22187916-22187935 | Msa1014160:CDS | 15.0% |
| !!! | TTTTTAATTTATTGCATTAG+TGG | - | chr7_1:22187250-22187269 | Msa1014160:intron | 15.0% |
| !!! | TAATACATATATGTTTTTAG+GGG | - | chr7_1:22187916-22187935 | Msa1014160:CDS | 15.0% |
| !!! | TTTTGATATTGAAACTGATT+TGG | - | chr7_1:22187139-22187158 | Msa1014160:intron | 20.0% |
| !! | TAAGCATTAAATACAAATCT+AGG | + | chr7_1:22187170-22187189 | None:intergenic | 20.0% |
| !!! | TTTTAGAAGTAGTAAGTTTT+TGG | - | chr7_1:22187685-22187704 | Msa1014160:CDS | 20.0% |
| !!! | AATACATATATGTTTTTAGG+GGG | - | chr7_1:22187917-22187936 | Msa1014160:CDS | 20.0% |
| !! | TTCATGTAACATTAATATTG+TGG | - | chr7_1:22188062-22188081 | Msa1014160:intron | 20.0% |
| !!! | TTTTGATATTGAAACTGATT+TGG | - | chr7_1:22187139-22187158 | Msa1014160:intron | 20.0% |
| !! | TAAGCATTAAATACAAATCT+AGG | + | chr7_1:22187170-22187189 | None:intergenic | 20.0% |
| !!! | TTTTAGAAGTAGTAAGTTTT+TGG | - | chr7_1:22187685-22187704 | Msa1014160:CDS | 20.0% |
| !!! | AATACATATATGTTTTTAGG+GGG | - | chr7_1:22187917-22187936 | Msa1014160:CDS | 20.0% |
| !! | TTCATGTAACATTAATATTG+TGG | - | chr7_1:22188062-22188081 | Msa1014160:intron | 20.0% |
| ! | TAAGTTAACTACCTTAAACT+AGG | - | chr7_1:22187057-22187076 | Msa1014160:CDS | 25.0% |
| ! | AATGCATGTATTTCTTTAGA+TGG | - | chr7_1:22187596-22187615 | Msa1014160:CDS | 25.0% |
| !!! | AAGCATTTTCCATGTTATTT+AGG | - | chr7_1:22188092-22188111 | Msa1014160:intron | 25.0% |
| ! | AAAATGGAACCTAAATAACA+TGG | + | chr7_1:22188104-22188123 | None:intergenic | 25.0% |
| !!! | TTCCTATTTTGAATTGTTAC+AGG | - | chr7_1:22188149-22188168 | Msa1014160:intron | 25.0% |
| ! | TACCTGTAACAATTCAAAAT+AGG | + | chr7_1:22188154-22188173 | None:intergenic | 25.0% |
| !!! | TGTTAGTTTGTTCTTTTTGT+AGG | - | chr7_1:22188239-22188258 | Msa1014160:intron | 25.0% |
| ! | TAAGTTAACTACCTTAAACT+AGG | - | chr7_1:22187057-22187076 | Msa1014160:CDS | 25.0% |
| ! | AATGCATGTATTTCTTTAGA+TGG | - | chr7_1:22187596-22187615 | Msa1014160:CDS | 25.0% |
| !!! | AAGCATTTTCCATGTTATTT+AGG | - | chr7_1:22188092-22188111 | Msa1014160:intron | 25.0% |
| ! | AAAATGGAACCTAAATAACA+TGG | + | chr7_1:22188104-22188123 | None:intergenic | 25.0% |
| !!! | TTCCTATTTTGAATTGTTAC+AGG | - | chr7_1:22188149-22188168 | Msa1014160:intron | 25.0% |
| ! | TACCTGTAACAATTCAAAAT+AGG | + | chr7_1:22188154-22188173 | None:intergenic | 25.0% |
| !!! | TGTTAGTTTGTTCTTTTTGT+AGG | - | chr7_1:22188239-22188258 | Msa1014160:intron | 25.0% |
| ATTTGTATCTTCTGATGAAG+AGG | - | chr7_1:22187280-22187299 | Msa1014160:intron | 30.0% | |
| AGTAACAAAAATGCAGATGA+TGG | - | chr7_1:22187464-22187483 | Msa1014160:intron | 30.0% | |
| GTAACAAAAATGCAGATGAT+GGG | - | chr7_1:22187465-22187484 | Msa1014160:intron | 30.0% | |
| ! | GGGTTTTTGTTAAAGGATTT+GGG | + | chr7_1:22187559-22187578 | None:intergenic | 30.0% |
| ! | TGGGTTTTTGTTAAAGGATT+TGG | + | chr7_1:22187560-22187579 | None:intergenic | 30.0% |
| ! | TTGCATTGGGTTTTTGTTAA+AGG | + | chr7_1:22187566-22187585 | None:intergenic | 30.0% |
| TTTAACAAAAACCCAATGCA+AGG | - | chr7_1:22187565-22187584 | Msa1014160:CDS | 30.0% | |
| !! | TAGGGGGAAAAAATTAGTTT+TGG | - | chr7_1:22187933-22187952 | Msa1014160:CDS | 30.0% |
| !!! | AGGGGGAAAAAATTAGTTTT+GGG | - | chr7_1:22187934-22187953 | Msa1014160:CDS | 30.0% |
| !!! | AAAATTAGTTTTGGGAGGAA+TGG | - | chr7_1:22187942-22187961 | Msa1014160:CDS | 30.0% |
| ! | AGCATTGAATTTGGATTGAA+GGG | + | chr7_1:22187993-22188012 | None:intergenic | 30.0% |
| !! | AAGCATTGAATTTGGATTGA+AGG | + | chr7_1:22187994-22188013 | None:intergenic | 30.0% |
| !! | TCACTCATAAGCATTGAATT+TGG | + | chr7_1:22188002-22188021 | None:intergenic | 30.0% |
| TGCATGACTTGAGAATAAAA+TGG | + | chr7_1:22188120-22188139 | None:intergenic | 30.0% | |
| ATTTGTATCTTCTGATGAAG+AGG | - | chr7_1:22187280-22187299 | Msa1014160:intron | 30.0% | |
| AGTAACAAAAATGCAGATGA+TGG | - | chr7_1:22187464-22187483 | Msa1014160:intron | 30.0% | |
| GTAACAAAAATGCAGATGAT+GGG | - | chr7_1:22187465-22187484 | Msa1014160:intron | 30.0% | |
| ! | GGGTTTTTGTTAAAGGATTT+GGG | + | chr7_1:22187559-22187578 | None:intergenic | 30.0% |
| ! | TGGGTTTTTGTTAAAGGATT+TGG | + | chr7_1:22187560-22187579 | None:intergenic | 30.0% |
| ! | TTGCATTGGGTTTTTGTTAA+AGG | + | chr7_1:22187566-22187585 | None:intergenic | 30.0% |
| TTTAACAAAAACCCAATGCA+AGG | - | chr7_1:22187565-22187584 | Msa1014160:CDS | 30.0% | |
| !! | TAGGGGGAAAAAATTAGTTT+TGG | - | chr7_1:22187933-22187952 | Msa1014160:CDS | 30.0% |
| !!! | AGGGGGAAAAAATTAGTTTT+GGG | - | chr7_1:22187934-22187953 | Msa1014160:CDS | 30.0% |
| !!! | AAAATTAGTTTTGGGAGGAA+TGG | - | chr7_1:22187942-22187961 | Msa1014160:CDS | 30.0% |
| ! | AGCATTGAATTTGGATTGAA+GGG | + | chr7_1:22187993-22188012 | None:intergenic | 30.0% |
| !! | AAGCATTGAATTTGGATTGA+AGG | + | chr7_1:22187994-22188013 | None:intergenic | 30.0% |
| !! | TCACTCATAAGCATTGAATT+TGG | + | chr7_1:22188002-22188021 | None:intergenic | 30.0% |
| TGCATGACTTGAGAATAAAA+TGG | + | chr7_1:22188120-22188139 | None:intergenic | 30.0% | |
| ATGGGTGATAACCTAGTTTA+AGG | + | chr7_1:22187071-22187090 | None:intergenic | 35.0% | |
| !! | GTAGTTTGATCAGTTGATGA+GGG | + | chr7_1:22187094-22187113 | None:intergenic | 35.0% |
| TCATGAAGATGAAAAACCTC+AGG | - | chr7_1:22187355-22187374 | Msa1014160:CDS | 35.0% | |
| CTAAATATAGTTCCAACCTG+AGG | + | chr7_1:22187374-22187393 | None:intergenic | 35.0% | |
| TTTACTCTAGCATGTAGTTG+TGG | - | chr7_1:22187497-22187516 | Msa1014160:intron | 35.0% | |
| !! | ATTCAATCTAGCCTTGCATT+GGG | + | chr7_1:22187579-22187598 | None:intergenic | 35.0% |
| TAAAATAGCGTGCTTTGTCA+GGG | + | chr7_1:22187670-22187689 | None:intergenic | 35.0% | |
| !!! | TTTTGGTTCCTCGTTTGAAA+AGG | - | chr7_1:22187702-22187721 | Msa1014160:CDS | 35.0% |
| TTAGAACTCAATGATCAAGC+TGG | - | chr7_1:22187728-22187747 | Msa1014160:CDS | 35.0% | |
| ! | GTTCAAGTAGTTGATGTAGT+TGG | - | chr7_1:22187794-22187813 | Msa1014160:CDS | 35.0% |
| !!! | GGGAAAAAATTAGTTTTGGG+AGG | - | chr7_1:22187937-22187956 | Msa1014160:CDS | 35.0% |
| GCTTATGAGTGAAGTAAATC+AGG | - | chr7_1:22188010-22188029 | Msa1014160:CDS | 35.0% | |
| TATTCTCAAGTCATGCATCA+TGG | - | chr7_1:22188123-22188142 | Msa1014160:intron | 35.0% | |
| ATGGGTGATAACCTAGTTTA+AGG | + | chr7_1:22187071-22187090 | None:intergenic | 35.0% | |
| !! | GTAGTTTGATCAGTTGATGA+GGG | + | chr7_1:22187094-22187113 | None:intergenic | 35.0% |
| TCATGAAGATGAAAAACCTC+AGG | - | chr7_1:22187355-22187374 | Msa1014160:CDS | 35.0% | |
| CTAAATATAGTTCCAACCTG+AGG | + | chr7_1:22187374-22187393 | None:intergenic | 35.0% | |
| TTTACTCTAGCATGTAGTTG+TGG | - | chr7_1:22187497-22187516 | Msa1014160:intron | 35.0% | |
| !! | ATTCAATCTAGCCTTGCATT+GGG | + | chr7_1:22187579-22187598 | None:intergenic | 35.0% |
| TAAAATAGCGTGCTTTGTCA+GGG | + | chr7_1:22187670-22187689 | None:intergenic | 35.0% | |
| !!! | TTTTGGTTCCTCGTTTGAAA+AGG | - | chr7_1:22187702-22187721 | Msa1014160:CDS | 35.0% |
| TTAGAACTCAATGATCAAGC+TGG | - | chr7_1:22187728-22187747 | Msa1014160:CDS | 35.0% | |
| ! | GTTCAAGTAGTTGATGTAGT+TGG | - | chr7_1:22187794-22187813 | Msa1014160:CDS | 35.0% |
| !!! | GGGAAAAAATTAGTTTTGGG+AGG | - | chr7_1:22187937-22187956 | Msa1014160:CDS | 35.0% |
| GCTTATGAGTGAAGTAAATC+AGG | - | chr7_1:22188010-22188029 | Msa1014160:CDS | 35.0% | |
| TATTCTCAAGTCATGCATCA+TGG | - | chr7_1:22188123-22188142 | Msa1014160:intron | 35.0% | |
| !! | TTGATCAGTTGATGAGGGAT+GGG | + | chr7_1:22187089-22187108 | None:intergenic | 40.0% |
| !! | TTTGATCAGTTGATGAGGGA+TGG | + | chr7_1:22187090-22187109 | None:intergenic | 40.0% |
| ! | GGTAGTTTGATCAGTTGATG+AGG | + | chr7_1:22187095-22187114 | None:intergenic | 40.0% |
| TGATGAAGAGGAAATCAGAG+AGG | - | chr7_1:22187292-22187311 | Msa1014160:intron | 40.0% | |
| GATGAAGAGGAAATCAGAGA+GGG | - | chr7_1:22187293-22187312 | Msa1014160:intron | 40.0% | |
| GAAGATGAAAAACCTCAGGT+TGG | - | chr7_1:22187359-22187378 | Msa1014160:CDS | 40.0% | |
| AAGAGTTATGCCCAATCGAT+GGG | - | chr7_1:22187422-22187441 | Msa1014160:intron | 40.0% | |
| ! | AACTCCAAAACCCATCGATT+GGG | + | chr7_1:22187435-22187454 | None:intergenic | 40.0% |
| TAACTCCAAAACCCATCGAT+TGG | + | chr7_1:22187436-22187455 | None:intergenic | 40.0% | |
| !! | CATTCAATCTAGCCTTGCAT+TGG | + | chr7_1:22187580-22187599 | None:intergenic | 40.0% |
| CTAAAATAGCGTGCTTTGTC+AGG | + | chr7_1:22187671-22187690 | None:intergenic | 40.0% | |
| ! | TCTAACCTCCTTTTCAAACG+AGG | + | chr7_1:22187713-22187732 | None:intergenic | 40.0% |
| !! | CGTGTTATTGATGACGACAA+CGG | + | chr7_1:22188285-22188304 | None:intergenic | 40.0% |
| !! | TTGATCAGTTGATGAGGGAT+GGG | + | chr7_1:22187089-22187108 | None:intergenic | 40.0% |
| !! | TTTGATCAGTTGATGAGGGA+TGG | + | chr7_1:22187090-22187109 | None:intergenic | 40.0% |
| ! | GGTAGTTTGATCAGTTGATG+AGG | + | chr7_1:22187095-22187114 | None:intergenic | 40.0% |
| TGATGAAGAGGAAATCAGAG+AGG | - | chr7_1:22187292-22187311 | Msa1014160:intron | 40.0% | |
| GATGAAGAGGAAATCAGAGA+GGG | - | chr7_1:22187293-22187312 | Msa1014160:intron | 40.0% | |
| GAAGATGAAAAACCTCAGGT+TGG | - | chr7_1:22187359-22187378 | Msa1014160:CDS | 40.0% | |
| AAGAGTTATGCCCAATCGAT+GGG | - | chr7_1:22187422-22187441 | Msa1014160:intron | 40.0% | |
| ! | AACTCCAAAACCCATCGATT+GGG | + | chr7_1:22187435-22187454 | None:intergenic | 40.0% |
| TAACTCCAAAACCCATCGAT+TGG | + | chr7_1:22187436-22187455 | None:intergenic | 40.0% | |
| !! | CATTCAATCTAGCCTTGCAT+TGG | + | chr7_1:22187580-22187599 | None:intergenic | 40.0% |
| CTAAAATAGCGTGCTTTGTC+AGG | + | chr7_1:22187671-22187690 | None:intergenic | 40.0% | |
| ! | TCTAACCTCCTTTTCAAACG+AGG | + | chr7_1:22187713-22187732 | None:intergenic | 40.0% |
| !! | CGTGTTATTGATGACGACAA+CGG | + | chr7_1:22188285-22188304 | None:intergenic | 40.0% |
| CAAGAGTTATGCCCAATCGA+TGG | - | chr7_1:22187421-22187440 | Msa1014160:intron | 45.0% | |
| !! | TATGCCCAATCGATGGGTTT+TGG | - | chr7_1:22187428-22187447 | Msa1014160:intron | 45.0% |
| TGGTTCCTCGTTTGAAAAGG+AGG | - | chr7_1:22187705-22187724 | Msa1014160:CDS | 45.0% | |
| !!! | AGTTTTGGGAGGAATGGACA+TGG | - | chr7_1:22187948-22187967 | Msa1014160:CDS | 45.0% |
| ACGACAACGGATCATTCACA+TGG | + | chr7_1:22188272-22188291 | None:intergenic | 45.0% | |
| CAAGAGTTATGCCCAATCGA+TGG | - | chr7_1:22187421-22187440 | Msa1014160:intron | 45.0% | |
| !! | TATGCCCAATCGATGGGTTT+TGG | - | chr7_1:22187428-22187447 | Msa1014160:intron | 45.0% |
| TGGTTCCTCGTTTGAAAAGG+AGG | - | chr7_1:22187705-22187724 | Msa1014160:CDS | 45.0% | |
| !!! | AGTTTTGGGAGGAATGGACA+TGG | - | chr7_1:22187948-22187967 | Msa1014160:CDS | 45.0% |
| ACGACAACGGATCATTCACA+TGG | + | chr7_1:22188272-22188291 | None:intergenic | 45.0% | |
| TTTGGGAGGAATGGACATGG+TGG | - | chr7_1:22187951-22187970 | Msa1014160:CDS | 50.0% | |
| TTTGGGAGGAATGGACATGG+TGG | - | chr7_1:22187951-22187970 | Msa1014160:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 22187034 | 22188314 | 22187034 | ID=Msa1014160;Name=Msa1014160 |
| chr7_1 | mRNA | 22187034 | 22188314 | 22187034 | ID=Msa1014160-mRNA-1;Parent=Msa1014160;Name=Msa1014160-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0.25|0|0.8|1|1|5|0|264 |
| chr7_1 | exon | 22188293 | 22188314 | 22188293 | ID=Msa1014160-mRNA-1:exon:5260;Parent=Msa1014160-mRNA-1 |
| chr7_1 | exon | 22187513 | 22188078 | 22187513 | ID=Msa1014160-mRNA-1:exon:5259;Parent=Msa1014160-mRNA-1 |
| chr7_1 | exon | 22187317 | 22187412 | 22187317 | ID=Msa1014160-mRNA-1:exon:5258;Parent=Msa1014160-mRNA-1 |
| chr7_1 | exon | 22187178 | 22187234 | 22187178 | ID=Msa1014160-mRNA-1:exon:5257;Parent=Msa1014160-mRNA-1 |
| chr7_1 | exon | 22187034 | 22187087 | 22187034 | ID=Msa1014160-mRNA-1:exon:5256;Parent=Msa1014160-mRNA-1 |
| chr7_1 | CDS | 22188293 | 22188314 | 22188293 | ID=Msa1014160-mRNA-1:cds;Parent=Msa1014160-mRNA-1 |
| chr7_1 | CDS | 22187513 | 22188078 | 22187513 | ID=Msa1014160-mRNA-1:cds;Parent=Msa1014160-mRNA-1 |
| chr7_1 | CDS | 22187317 | 22187412 | 22187317 | ID=Msa1014160-mRNA-1:cds;Parent=Msa1014160-mRNA-1 |
| chr7_1 | CDS | 22187178 | 22187234 | 22187178 | ID=Msa1014160-mRNA-1:cds;Parent=Msa1014160-mRNA-1 |
| chr7_1 | CDS | 22187034 | 22187087 | 22187034 | ID=Msa1014160-mRNA-1:cds;Parent=Msa1014160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
