AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1014280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1014280 MtrunA17_Chr7g0228531 36.538 208 62 5 3 146 230 431 6.86e-33 120
Msa1014280 MtrunA17_Chr1g0177901 45.872 109 51 2 3 111 4 104 1.27e-28 104
Msa1014280 MtrunA17_Chr7g0228481 35.096 208 65 5 3 146 230 431 2.33e-28 107
Msa1014280 MtrunA17_Chr3g0117511 49.474 95 47 1 3 97 193 286 9.35e-28 106
Msa1014280 MtrunA17_Chr4g0058991 46.316 95 50 1 3 97 219 312 3.24e-26 102
Msa1014280 MtrunA17_Chr7g0228401 38.194 144 57 2 4 116 290 432 5.81e-26 102
Msa1014280 MtrunA17_Chr7g0233061 58.228 79 32 1 14 92 199 276 8.41e-26 100
Msa1014280 MtrunA17_Chr5g0429661 45.745 94 50 1 4 97 133 225 1.43e-25 99.4
Msa1014280 MtrunA17_Chr1g0157731 41.379 87 50 1 3 89 101 186 5.09e-20 85.5
Msa1014280 MtrunA17_Chr1g0157731 32.051 78 53 0 11 88 57 134 9.02e-11 58.9
Msa1014280 MtrunA17_Chr7g0238631 43.023 86 48 1 4 89 124 208 8.62e-20 84.7
Msa1014280 MtrunA17_Chr3g0139671 44.304 79 43 1 11 89 103 180 2.88e-19 83.2
Msa1014280 MtrunA17_Chr6g0460661 45.679 81 43 1 14 94 37 116 2.63e-18 76.6
Msa1014280 MtrunA17_Chr5g0397841 41.176 85 49 1 4 88 121 204 7.94e-18 79.0
Msa1014280 MtrunA17_Chr5g0416341 37.209 129 72 4 3 124 36 162 1.58e-17 78.2
Msa1014280 MtrunA17_Chr4g0008551 36.559 93 58 1 3 95 48 139 1.31e-16 75.1
Msa1014280 MtrunA17_Chr8g0362231 39.785 93 55 1 3 95 32 123 4.09e-16 73.9
Msa1014280 MtrunA17_Chr3g0133601 33.019 106 67 2 4 109 51 152 4.21e-16 72.0
Msa1014280 MtrunA17_Chr4g0032401 37.324 142 69 7 3 138 34 161 4.43e-16 73.6
Msa1014280 MtrunA17_Chr2g0309911 41.558 77 43 2 14 89 34 109 4.83e-15 70.5
Msa1014280 MtrunA17_Chr4g0042501 37.931 87 53 1 4 90 116 201 6.18e-15 70.5
Msa1014280 MtrunA17_Chr5g0417621 36.782 87 54 1 4 90 145 230 8.46e-15 70.1
Msa1014280 MtrunA17_Chr6g0480581 39.130 92 51 3 4 94 18 105 1.09e-14 68.6
Msa1014280 MtrunA17_Chr5g0441131 45.312 64 35 0 29 92 48 111 1.25e-14 67.4
Msa1014280 MtrunA17_Chr7g0274581 42.857 84 35 2 17 88 27 109 1.31e-14 67.8
Msa1014280 MtrunA17_Chr7g0247131 41.667 72 39 2 19 88 5 75 1.40e-14 68.6
Msa1014280 MtrunA17_Chr1g0193371 39.080 87 46 3 9 94 35 115 1.69e-14 69.3
Msa1014280 MtrunA17_Chr8g0342541 37.931 87 52 2 4 89 25 110 2.04e-14 68.9
Msa1014280 MtrunA17_Chr4g0048511 38.298 94 54 2 26 119 49 138 2.10e-14 68.9
Msa1014280 MtrunA17_Chr1g0193801 31.624 117 75 3 26 141 48 160 2.50e-14 68.9
Msa1014280 MtrunA17_Chr2g0328771 37.234 94 50 2 26 119 56 140 2.51e-14 68.6
Msa1014280 MtrunA17_Chr3g0088461 36.559 93 52 3 3 94 39 125 2.51e-14 68.6
Msa1014280 MtrunA17_Chr1g0203441 37.000 100 56 3 3 101 30 123 2.54e-14 68.2
Msa1014280 MtrunA17_Chr5g0437321 38.158 76 46 1 14 89 40 114 2.80e-14 68.2
Msa1014280 MtrunA17_Chr8g0342521 45.312 64 34 1 26 89 48 110 2.88e-14 68.6
Msa1014280 MtrunA17_Chr8g0342481 46.875 64 33 1 26 89 49 111 3.18e-14 68.6
Msa1014280 MtrunA17_Chr1g0211161 37.500 88 48 3 3 89 30 111 4.87e-14 66.6
Msa1014280 MtrunA17_Chr3g0125801 40.230 87 48 2 4 90 30 112 5.49e-14 67.4
Msa1014280 MtrunA17_Chr3g0117091 39.326 89 45 4 3 89 29 110 7.09e-14 67.4
Msa1014280 MtrunA17_Chr2g0330041 45.312 64 34 1 26 89 48 110 8.40e-14 67.4
Msa1014280 MtrunA17_Chr7g0270891 47.541 61 31 1 29 89 51 110 8.53e-14 67.0
Msa1014280 MtrunA17_Chr2g0323411 44.928 69 37 1 26 94 48 115 1.07e-13 66.6
Msa1014280 MtrunA17_Chr7g0254261 42.500 80 45 1 16 95 112 190 1.26e-13 66.6
Msa1014280 MtrunA17_Chr8g0349261 40.580 69 40 1 26 94 50 117 1.87e-13 65.9
Msa1014280 MtrunA17_Chr5g0435101 43.750 64 35 1 26 89 47 109 2.00e-13 64.7
Msa1014280 MtrunA17_Chr4g0058631 43.750 64 35 1 26 89 48 110 2.06e-13 66.2
Msa1014280 MtrunA17_Chr2g0281071 43.478 69 38 1 26 94 49 116 2.10e-13 65.9
Msa1014280 MtrunA17_Chr4g0070611 45.312 64 34 1 26 89 48 110 2.82e-13 65.5
Msa1014280 MtrunA17_Chr4g0070641 45.312 64 34 1 26 89 48 110 2.95e-13 63.5
Msa1014280 MtrunA17_Chr3g0103281 47.619 63 32 1 26 88 48 109 3.06e-13 65.5
Msa1014280 MtrunA17_Chr2g0327821 32.773 119 77 3 4 120 19 136 3.50e-13 64.3
Msa1014280 MtrunA17_Chr1g0180391 43.548 62 34 1 26 87 55 115 3.59e-13 64.3
Msa1014280 MtrunA17_Chr7g0233151 56.000 50 21 1 48 97 6 54 4.06e-13 63.2
Msa1014280 MtrunA17_Chr4g0057031 43.750 64 35 1 26 89 48 110 4.10e-13 64.7
Msa1014280 MtrunA17_Chr7g0271241 37.931 87 47 3 3 88 29 109 5.15e-13 65.1
Msa1014280 MtrunA17_Chr5g0410961 42.188 64 36 1 26 89 48 110 5.78e-13 64.7
Msa1014280 MtrunA17_Chr8g0385321 41.270 63 36 1 26 88 48 109 6.77e-13 64.3
Msa1014280 MtrunA17_Chr3g0115821 44.444 63 34 1 26 88 48 109 6.85e-13 64.7
Msa1014280 MtrunA17_Chr7g0228891 43.750 64 35 1 26 89 48 110 7.80e-13 63.9
Msa1014280 MtrunA17_Chr3g0131121 36.782 87 50 3 3 89 29 110 8.71e-13 63.9
Msa1014280 MtrunA17_Chr4g0044421 45.902 61 32 1 29 89 51 110 8.73e-13 62.8
Msa1014280 MtrunA17_Chr4g0055981 36.782 87 53 2 4 89 68 153 8.75e-13 63.2
Msa1014280 MtrunA17_Chr5g0440781 40.625 64 38 0 29 92 51 114 1.01e-12 62.4
Msa1014280 MtrunA17_Chr5g0397231 42.188 64 36 1 26 89 48 110 1.13e-12 63.9
Msa1014280 MtrunA17_Chr8g0343831 44.262 61 33 1 29 89 47 106 1.19e-12 63.2
Msa1014280 MtrunA17_Chr5g0441141 40.625 64 38 0 29 92 51 114 1.21e-12 63.5
Msa1014280 MtrunA17_Chr6g0452271 41.791 67 38 1 26 92 48 113 1.21e-12 63.9
Msa1014280 MtrunA17_Chr4g0022901 34.444 90 56 2 9 98 34 120 1.32e-12 63.2
Msa1014280 MtrunA17_Chr5g0440761 40.625 64 38 0 29 92 51 114 1.33e-12 63.2
Msa1014280 MtrunA17_Chr1g0203411 29.323 133 69 4 26 134 48 179 1.42e-12 63.5
Msa1014280 MtrunA17_Chr1g0167661 34.513 113 59 4 29 127 51 162 1.53e-12 62.8
Msa1014280 MtrunA17_Chr8g0387421 42.188 64 36 1 26 89 48 110 1.56e-12 63.5
Msa1014280 MtrunA17_Chr7g0240821 40.541 74 41 2 18 89 27 99 1.82e-12 62.4
Msa1014280 MtrunA17_Chr5g0434571 45.902 61 32 1 29 89 87 146 2.19e-12 63.2
Msa1014280 MtrunA17_Chr4g0037141 41.270 63 36 1 26 88 48 109 2.22e-12 62.8
Msa1014280 MtrunA17_Chr3g0110351 45.902 61 32 1 29 89 51 110 2.29e-12 62.8
Msa1014280 MtrunA17_Chr6g0487491 31.933 119 72 3 26 135 49 167 2.31e-12 62.4
Msa1014280 MtrunA17_Chr7g0229101 43.836 73 38 2 22 92 2 73 2.36e-12 62.0
Msa1014280 MtrunA17_Chr4g0022931 34.043 94 59 2 9 102 34 124 2.43e-12 62.4
Msa1014280 MtrunA17_Chr6g0470971 32.609 92 56 2 29 120 53 138 2.59e-12 62.4
Msa1014280 MtrunA17_Chr1g0186061 36.047 86 53 2 3 87 32 116 2.86e-12 62.4
Msa1014280 MtrunA17_Chr1g0168661 37.209 86 52 2 3 87 33 117 2.97e-12 62.0
Msa1014280 MtrunA17_Chr2g0323351 33.036 112 64 4 9 112 33 141 3.09e-12 62.0
Msa1014280 MtrunA17_Chr6g0460671 38.750 80 48 1 11 90 117 195 3.30e-12 62.8
Msa1014280 MtrunA17_Chr4g0022911 32.292 96 63 2 4 98 26 120 3.56e-12 62.4
Msa1014280 MtrunA17_Chr5g0395281 42.188 64 36 1 26 89 48 110 3.78e-12 62.4
Msa1014280 MtrunA17_Chr8g0346561 40.625 64 37 1 26 89 48 110 4.17e-12 62.0
Msa1014280 MtrunA17_Chr4g0030881 31.731 104 62 2 8 103 24 126 5.25e-12 61.6
Msa1014280 MtrunA17_Chr7g0220341 43.750 64 35 1 26 89 63 125 5.63e-12 61.6
Msa1014280 MtrunA17_Chr3g0104491 34.483 87 52 2 32 114 2 87 5.65e-12 61.6
Msa1014280 MtrunA17_Chr4g0039971 42.188 64 36 1 26 89 49 111 6.41e-12 61.6
Msa1014280 MtrunA17_Chr3g0121241 44.262 61 33 1 29 89 81 140 7.04e-12 61.6
Msa1014280 MtrunA17_Chr4g0053431 32.911 79 52 1 11 89 23 100 7.33e-12 61.2
Msa1014280 MtrunA17_Chr1g0151941 41.270 63 36 1 26 88 49 110 7.74e-12 60.8
Msa1014280 MtrunA17_Chr1g0187761 34.066 91 59 1 29 119 51 140 9.08e-12 60.8
Msa1014280 MtrunA17_Chr5g0434901 42.188 64 36 1 26 89 9 71 9.46e-12 58.5
Msa1014280 MtrunA17_Chr7g0217741 39.024 82 46 2 29 110 51 128 1.18e-11 60.8
Msa1014280 MtrunA17_Chr7g0275911 40.984 61 35 1 29 89 51 110 1.21e-11 60.5
Msa1014280 MtrunA17_Chr7g0228231 41.935 62 35 1 26 87 50 110 1.26e-11 59.7
Msa1014280 MtrunA17_Chr2g0311221 45.902 61 32 1 29 89 53 112 1.35e-11 60.8
Msa1014280 MtrunA17_Chr4g0042671 34.737 95 58 2 29 123 51 141 1.46e-11 60.8
Msa1014280 MtrunA17_Chr1g0209661 41.935 62 35 1 26 87 63 123 1.54e-11 60.5
Msa1014280 MtrunA17_Chr5g0434931 41.791 67 38 1 26 92 71 136 1.56e-11 60.5
Msa1014280 MtrunA17_Chr7g0261281 33.333 99 60 3 3 98 24 119 1.70e-11 60.1
Msa1014280 MtrunA17_Chr7g0228991 42.188 64 36 1 26 89 65 127 1.88e-11 60.1
Msa1014280 MtrunA17_Chr7g0229131 42.308 78 41 2 26 100 8 84 2.05e-11 58.5
Msa1014280 MtrunA17_Chr4g0022881 35.714 84 53 1 25 108 47 129 2.88e-11 59.3
Msa1014280 MtrunA17_Chr4g0028311 40.625 64 37 1 26 89 49 111 3.41e-11 59.7
Msa1014280 MtrunA17_Chr7g0217221 34.940 83 53 1 26 108 48 129 3.58e-11 59.3
Msa1014280 MtrunA17_Chr2g0327351 40.625 64 37 1 26 89 49 111 3.61e-11 59.7
Msa1014280 MtrunA17_Chr4g0068061 41.791 67 38 1 26 92 48 113 3.62e-11 59.7
Msa1014280 MtrunA17_Chr8g0334881 36.957 92 55 3 3 92 22 112 4.01e-11 59.3
Msa1014280 MtrunA17_Chr4g0054391 41.270 63 36 1 26 88 49 110 4.03e-11 59.3
Msa1014280 MtrunA17_Chr4g0022891 32.530 83 54 2 29 110 51 132 4.31e-11 58.9
Msa1014280 MtrunA17_Chr6g0450101 34.483 87 51 2 26 107 50 135 6.16e-11 58.2
Msa1014280 MtrunA17_Chr5g0400821 39.683 63 37 1 26 88 49 110 7.84e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1014280 AT4G18770.1 51.579 95 45 1 3 97 227 320 1.96e-29 111
Msa1014280 AT3G27785.1 44.211 95 52 1 3 97 199 292 5.34e-26 102
Msa1014280 AT5G58850.1 47.368 95 49 1 14 108 126 219 1.77e-25 100
Msa1014280 AT5G40360.1 44.860 107 54 2 3 105 168 273 2.18e-25 99.4
Msa1014280 AT5G11050.1 43.000 100 56 1 14 113 126 224 6.06e-24 96.3
Msa1014280 AT5G40430.1 42.574 101 56 2 3 102 63 162 1.99e-23 92.4
Msa1014280 AT2G25230.1 42.000 100 56 2 4 102 37 135 3.00e-23 91.7
Msa1014280 AT4G00540.2 50.000 74 36 1 16 89 129 201 2.97e-19 83.2
Msa1014280 AT4G00540.1 50.000 74 36 1 16 89 127 199 3.86e-19 82.8
Msa1014280 AT5G11510.2 43.023 86 45 2 4 89 95 176 3.88e-19 83.2
Msa1014280 AT5G11510.5 43.023 86 45 2 4 89 95 176 3.93e-19 83.2
Msa1014280 AT5G11510.3 43.023 86 45 2 4 89 95 176 4.40e-19 83.2
Msa1014280 AT5G11510.1 43.023 86 45 2 4 89 95 176 4.40e-19 83.2
Msa1014280 AT5G11510.4 43.023 86 45 2 4 89 95 176 4.40e-19 83.2
Msa1014280 AT3G09370.2 41.860 86 49 1 4 89 146 230 1.58e-18 81.3
Msa1014280 AT3G09370.1 41.860 86 49 1 4 89 141 225 1.69e-18 81.3
Msa1014280 AT3G09370.3 41.860 86 49 1 4 89 154 238 1.88e-18 81.3
Msa1014280 AT4G32730.5 41.772 79 45 1 11 89 105 182 6.55e-18 79.7
Msa1014280 AT4G32730.4 41.772 79 45 1 11 89 105 182 6.55e-18 79.7
Msa1014280 AT4G32730.3 41.772 79 45 1 11 89 105 182 6.55e-18 79.7
Msa1014280 AT4G32730.2 41.772 79 45 1 11 89 105 182 6.55e-18 79.7
Msa1014280 AT4G32730.1 41.772 79 45 1 11 89 105 182 6.63e-18 79.7
Msa1014280 AT5G02320.3 40.698 86 50 1 4 89 78 162 6.64e-18 79.3
Msa1014280 AT5G02320.1 40.698 86 50 1 4 89 138 222 6.75e-18 79.7
Msa1014280 AT5G02320.2 40.698 86 50 1 4 89 138 222 6.75e-18 79.7
Msa1014280 AT4G33450.1 38.679 106 61 2 4 109 33 134 4.98e-17 75.5
Msa1014280 AT3G13890.1 43.243 74 41 1 16 89 47 119 4.66e-16 73.9
Msa1014280 AT2G02820.3 38.835 103 61 2 3 105 40 140 1.33e-15 72.4
Msa1014280 AT2G02820.1 38.835 103 61 2 3 105 40 140 1.93e-15 72.4
Msa1014280 AT1G14350.2 40.404 99 57 2 3 101 35 131 2.23e-15 72.4
Msa1014280 AT1G14350.1 40.404 99 57 2 3 101 35 131 2.23e-15 72.4
Msa1014280 AT2G02820.2 38.835 103 61 2 3 105 40 140 2.29e-15 72.4
Msa1014280 AT1G17950.1 32.479 117 75 2 11 124 23 138 3.29e-15 70.5
Msa1014280 AT3G29020.1 37.931 87 53 1 4 90 76 161 3.36e-15 70.1
Msa1014280 AT2G39880.1 39.759 83 49 1 14 96 71 152 5.61e-15 70.9
Msa1014280 AT3G29020.2 37.931 87 53 1 4 90 78 163 7.48e-15 70.1
Msa1014280 AT3G08500.1 38.947 95 47 4 3 94 47 133 1.17e-14 69.7
Msa1014280 AT3G55730.1 36.538 104 57 2 14 109 77 179 1.57e-14 69.7
Msa1014280 AT3G28470.1 43.750 64 35 1 26 89 48 110 1.62e-14 69.3
Msa1014280 AT1G69560.2 37.931 87 53 1 4 90 134 219 2.04e-14 69.3
Msa1014280 AT1G69560.1 37.931 87 53 1 4 90 118 203 2.06e-14 68.9
Msa1014280 AT5G35550.2 38.372 86 52 1 26 111 53 137 2.25e-14 68.6
Msa1014280 AT5G26660.2 47.541 61 31 1 29 89 20 79 2.35e-14 68.9
Msa1014280 AT4G28110.1 48.485 66 33 1 29 94 51 115 2.77e-14 68.6
Msa1014280 AT1G57560.1 30.872 149 85 6 3 143 29 167 2.81e-14 68.6
Msa1014280 AT5G26660.1 38.636 88 47 3 3 89 29 110 2.83e-14 68.9
Msa1014280 AT4G22680.1 46.875 64 33 1 26 89 48 110 3.81e-14 67.8
Msa1014280 AT3G48920.1 49.180 61 30 1 29 89 57 116 4.10e-14 67.8
Msa1014280 AT3G13890.2 45.312 64 34 1 26 89 48 110 4.60e-14 68.2
Msa1014280 AT5G12870.1 36.559 93 52 3 3 94 35 121 4.65e-14 67.8
Msa1014280 AT1G09540.1 41.463 82 41 3 9 89 35 110 4.81e-14 68.2
Msa1014280 AT5G35550.1 38.372 86 52 1 26 111 50 134 5.03e-14 67.4
Msa1014280 AT4G01680.2 45.312 64 34 1 26 89 60 122 6.14e-14 67.8
Msa1014280 AT1G26780.1 36.782 87 54 1 4 90 109 194 6.18e-14 67.4
Msa1014280 AT1G73410.2 42.667 75 42 1 16 90 29 102 6.33e-14 66.2
Msa1014280 AT4G12350.1 45.312 64 34 1 26 89 48 110 6.49e-14 67.4
Msa1014280 AT1G26780.2 36.782 87 54 1 4 90 109 194 6.51e-14 67.8
Msa1014280 AT4G01680.3 45.312 64 34 1 26 89 48 110 6.80e-14 67.0
Msa1014280 AT1G57560.2 45.312 64 34 1 26 89 48 110 6.82e-14 67.4
Msa1014280 AT4G01680.1 45.312 64 34 1 26 89 48 110 7.26e-14 67.8
Msa1014280 AT1G73410.1 42.667 75 42 1 16 90 29 102 8.64e-14 66.6
Msa1014280 AT5G14750.1 39.326 89 50 3 3 89 28 114 9.40e-14 65.9
Msa1014280 AT5G17800.1 32.576 132 74 4 4 128 104 227 2.03e-13 66.2
Msa1014280 AT5G14750.3 45.902 61 32 1 29 89 21 80 2.34e-13 64.3
Msa1014280 AT3G61250.1 42.857 63 35 1 26 88 48 109 2.95e-13 65.9
Msa1014280 AT3G12720.1 35.632 87 54 2 4 89 35 120 3.16e-13 65.9
Msa1014280 AT4G05100.1 43.478 69 38 1 26 94 49 116 4.20e-13 65.5
Msa1014280 AT1G63910.1 43.750 64 35 1 26 89 48 110 6.68e-13 65.1
Msa1014280 AT5G56110.1 46.032 63 33 1 26 88 48 109 6.70e-13 64.7
Msa1014280 AT4G21440.1 37.234 94 55 2 26 119 48 137 6.86e-13 65.1
Msa1014280 AT4G09460.1 42.188 64 36 1 26 89 48 110 1.19e-12 63.5
Msa1014280 AT3G27810.2 28.030 132 82 3 26 145 7 137 1.20e-12 62.4
Msa1014280 AT5G40330.1 38.202 89 51 3 3 89 24 110 1.89e-12 62.8
Msa1014280 AT3G53200.2 39.189 74 44 1 26 99 12 84 1.92e-12 62.4
Msa1014280 AT5G10280.1 47.541 61 31 1 29 89 51 110 2.14e-12 63.5
Msa1014280 AT3G27810.1 28.030 132 82 3 26 145 56 186 2.19e-12 62.4
Msa1014280 AT3G09230.1 33.696 92 60 1 3 94 65 155 2.37e-12 63.5
Msa1014280 AT4G38620.1 40.625 64 37 1 26 89 48 110 2.46e-12 63.2
Msa1014280 AT3G13540.1 42.188 64 36 1 26 89 59 121 2.52e-12 62.8
Msa1014280 AT5G54230.1 36.264 91 54 2 29 119 51 137 2.56e-12 63.2
Msa1014280 AT1G66230.1 43.750 64 35 1 26 89 48 110 2.71e-12 62.8
Msa1014280 AT2G26950.1 38.554 83 46 4 14 94 39 118 3.15e-12 63.2
Msa1014280 AT1G16490.1 33.696 92 60 1 29 120 53 143 3.43e-12 62.4
Msa1014280 AT5G14340.1 43.750 64 35 1 26 89 60 122 3.46e-12 62.4
Msa1014280 AT1G35515.1 42.188 64 36 1 26 89 48 110 3.60e-12 61.6
Msa1014280 AT3G53200.1 33.673 98 61 3 4 99 22 117 3.61e-12 62.0
Msa1014280 AT4G17785.2 36.471 85 50 2 29 113 52 132 3.68e-12 62.8
Msa1014280 AT2G32460.1 30.000 110 70 3 29 138 57 159 3.79e-12 63.2
Msa1014280 AT3G27920.1 42.188 64 36 1 26 89 50 112 4.14e-12 62.0
Msa1014280 AT5G65230.1 47.541 61 31 1 29 89 51 110 4.19e-12 62.4
Msa1014280 AT5G52600.1 42.188 64 36 1 26 89 48 110 4.28e-12 61.2
Msa1014280 AT3G24310.1 38.372 86 51 2 3 87 30 114 4.30e-12 62.4
Msa1014280 AT3G50060.1 29.474 95 66 1 11 105 24 117 4.30e-12 62.4
Msa1014280 AT2G32460.2 29.204 113 73 3 26 138 42 147 4.35e-12 62.8
Msa1014280 AT1G22640.1 40.625 64 37 1 26 89 48 110 4.36e-12 62.0
Msa1014280 AT4G17785.1 36.471 85 50 2 29 113 52 132 4.46e-12 62.8
Msa1014280 AT2G16720.1 40.625 64 37 1 26 89 48 110 6.35e-12 61.6
Msa1014280 AT1G48000.1 45.161 62 33 1 26 87 68 128 6.91e-12 61.2
Msa1014280 AT4G34990.1 40.625 64 37 1 26 89 48 110 7.65e-12 61.6
Msa1014280 AT1G74080.1 42.188 64 36 1 26 89 48 110 8.16e-12 62.0
Msa1014280 AT1G68320.1 39.726 73 42 2 16 87 44 115 9.77e-12 61.2
Msa1014280 AT4G13480.1 37.209 86 52 2 3 87 18 102 1.10e-11 60.8
Msa1014280 AT3G01530.1 40.323 62 36 1 26 87 61 121 1.11e-11 60.5
Msa1014280 AT5G16770.4 42.188 64 36 1 29 92 51 113 1.19e-11 61.2
Msa1014280 AT5G16770.3 42.188 64 36 1 29 92 51 113 1.19e-11 61.2
Msa1014280 AT5G16600.1 43.750 64 35 1 26 89 48 110 1.23e-11 61.2
Msa1014280 AT3G11440.3 39.130 69 40 2 29 96 80 147 1.25e-11 61.6
Msa1014280 AT3G11440.4 39.130 69 40 2 29 96 80 147 1.25e-11 61.6
Msa1014280 AT3G11440.1 39.130 69 40 2 29 96 80 147 1.25e-11 61.6
Msa1014280 AT3G30210.1 35.354 99 61 3 3 100 39 135 1.33e-11 60.8
Msa1014280 AT5G62470.1 31.193 109 71 2 16 124 37 141 1.35e-11 61.2
Msa1014280 AT1G56160.1 43.939 66 36 1 29 94 53 117 1.38e-11 60.8
Msa1014280 AT5G06100.5 38.750 80 44 3 18 96 63 138 1.63e-11 61.2
Msa1014280 AT5G06100.2 38.750 80 44 3 18 96 63 138 1.63e-11 61.2
Msa1014280 AT5G06100.3 38.750 80 44 3 18 96 63 138 1.63e-11 61.2
Msa1014280 AT5G06100.4 38.750 80 44 3 18 96 63 138 1.63e-11 61.2
Msa1014280 AT5G16770.1 42.188 64 36 1 29 92 51 113 1.78e-11 60.8
Msa1014280 AT5G16770.2 42.188 64 36 1 29 92 51 113 1.78e-11 60.8
Msa1014280 AT5G06100.1 38.750 80 44 3 18 96 63 138 1.84e-11 60.8
Msa1014280 AT1G74430.1 39.437 71 42 1 29 99 51 120 2.00e-11 60.5
Msa1014280 AT3G02940.2 42.623 61 34 1 29 89 51 110 2.03e-11 60.5
Msa1014280 AT3G12820.2 40.278 72 42 1 26 97 2 72 2.11e-11 59.3
Msa1014280 AT2G31180.1 37.349 83 49 2 26 106 48 129 2.22e-11 60.1
Msa1014280 AT3G46130.1 35.165 91 57 2 3 92 21 110 2.22e-11 60.1
Msa1014280 AT3G11440.2 31.959 97 63 3 2 96 52 147 2.23e-11 60.8
Msa1014280 AT3G23250.1 41.667 60 34 1 29 88 51 109 2.35e-11 60.5
Msa1014280 AT2G47190.1 36.782 87 53 2 2 87 31 116 2.40e-11 60.1
Msa1014280 AT5G59780.3 34.066 91 58 2 3 92 20 109 2.73e-11 59.7
Msa1014280 AT1G79180.2 39.024 82 47 2 29 110 86 164 2.83e-11 60.5
Msa1014280 AT3G02940.1 42.623 61 34 1 29 89 51 110 2.83e-11 60.1
Msa1014280 AT3G02940.3 42.623 61 34 1 29 89 51 110 2.83e-11 60.1
Msa1014280 AT1G79180.1 39.024 82 47 2 29 110 53 131 4.37e-11 59.7
Msa1014280 AT1G34670.1 38.667 75 44 2 16 89 37 110 4.81e-11 59.7
Msa1014280 AT3G12820.1 40.278 72 42 1 26 97 50 120 5.09e-11 58.9
Msa1014280 AT3G49690.1 40.625 64 37 1 26 89 49 111 5.91e-11 59.3
Msa1014280 AT5G67300.1 32.911 79 52 1 11 89 24 101 6.10e-11 59.3
Msa1014280 AT5G40350.2 41.935 62 35 1 26 87 8 68 6.12e-11 57.8
Msa1014280 AT5G57620.1 42.623 61 34 1 29 89 52 111 6.79e-11 59.3
Msa1014280 AT3G47600.2 41.270 63 36 1 26 88 42 103 7.16e-11 59.3
Msa1014280 AT5G59780.2 40.299 67 39 1 26 92 23 88 7.65e-11 58.2
Msa1014280 AT1G25340.2 40.909 66 38 1 22 87 45 109 8.06e-11 58.9
Msa1014280 AT2G26960.1 40.625 64 37 1 26 89 56 118 8.63e-11 58.9
Msa1014280 AT4G25560.1 38.158 76 46 1 29 104 49 123 8.69e-11 58.5
Msa1014280 AT1G25340.3 40.909 66 38 1 22 87 45 109 9.40e-11 58.9

Find 23 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGTCGTTTAGCAACCTTTA+AGG 0.177380 7_1:+22698501 Msa1014280:CDS
TAGCATTCTTCTGGAATCTA+TGG 0.225382 7_1:+22697034 Msa1014280:intron
CGTGTTCATTGAGTTGTTCT+TGG 0.251185 7_1:-22698364 None:intergenic
AAAATGTAGTTGAGAATAAT+TGG 0.251203 7_1:+22698259 Msa1014280:CDS
TTGAGTTGTTCTTGGCATTC+CGG 0.325493 7_1:-22698356 None:intergenic
GAAATTGTTAAGAGATTTCC+AGG 0.336421 7_1:+22698285 Msa1014280:CDS
AAGATAGGCACCTTAGTATC+TGG 0.405000 7_1:-22697152 None:intergenic
TCATCACTAATATTAACATT+TGG 0.410601 7_1:-22698405 None:intergenic
CATATTGCTACCTTTCTAGA+TGG 0.420484 7_1:+22697083 Msa1014280:CDS
TTCAGAGTGTGATTATGAAA+TGG 0.434618 7_1:+22698431 Msa1014280:CDS
GGAATGCCATTGAGCGTGTC+CGG 0.456600 7_1:+22698337 Msa1014280:CDS
TTCAGTCTTGCCATCTAGAA+AGG 0.458563 7_1:-22697093 None:intergenic
AGCATTCTTCTGGAATCTAT+GGG 0.458629 7_1:+22697035 Msa1014280:intron
CACTAATATTAACATTTGGT+TGG 0.486948 7_1:-22698401 None:intergenic
AGAGTTCAGTTAAGAACCAT+TGG 0.497650 7_1:+22698316 Msa1014280:CDS
GGCATTCCGGACACGCTCAA+TGG 0.510370 7_1:-22698343 None:intergenic
CTATCTTCGACCAGATACTA+AGG 0.518324 7_1:+22697142 Msa1014280:CDS
ACTGAACTCTCAGTACGGCC+TGG 0.548161 7_1:-22698303 None:intergenic
GTTGCTTTGAGCTTAAAGAA+TGG 0.554111 7_1:+22697057 Msa1014280:CDS
CACGCTCAATGGCATTCCAA+TGG 0.603862 7_1:-22698332 None:intergenic
TCTTAACTGAACTCTCAGTA+CGG 0.632743 7_1:-22698308 None:intergenic
CAAGAACAACTCAATGAACA+CGG 0.646667 7_1:+22698365 Msa1014280:CDS
TATGCTTGCAGGATGAACCA+TGG 0.685451 7_1:+22698199 Msa1014280:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGTAAAAATAATTAAAGT+CGG - chr7_1:22697420-22697439 None:intergenic 10.0%
!! TAAATATATAAATAACTAGA+AGG - chr7_1:22698170-22698189 None:intergenic 10.0%
!! TAAGTAAAAATAATTAAAGT+CGG - chr7_1:22697420-22697439 None:intergenic 10.0%
!! TAAATATATAAATAACTAGA+AGG - chr7_1:22698170-22698189 None:intergenic 10.0%
!!! AATGTTTTCATATTTTAGTA+TGG + chr7_1:22696946-22696965 Msa1014280:intron 15.0%
!! TAAAAAAGAATTGAAAAGAT+AGG - chr7_1:22697170-22697189 None:intergenic 15.0%
!! GAATTAGGTTATAAAAATAA+GGG - chr7_1:22697231-22697250 None:intergenic 15.0%
!! ATAACATCAAATTGATTAAA+TGG + chr7_1:22697308-22697327 Msa1014280:intron 15.0%
!! TAACATCAAATTGATTAAAT+GGG + chr7_1:22697309-22697328 Msa1014280:intron 15.0%
!!! GAATATATCATTTTTTTATG+TGG + chr7_1:22697504-22697523 Msa1014280:intron 15.0%
!! AAAAAATATATATAAACGTC+CGG + chr7_1:22697563-22697582 Msa1014280:intron 15.0%
!!! AATCTTTATTTTTTTCAAGA+AGG - chr7_1:22697598-22697617 None:intergenic 15.0%
!! AATAACTATAGATAAAACTT+AGG - chr7_1:22698011-22698030 None:intergenic 15.0%
!!! AATGTTTTCATATTTTAGTA+TGG + chr7_1:22696946-22696965 Msa1014280:intron 15.0%
!! TAAAAAAGAATTGAAAAGAT+AGG - chr7_1:22697170-22697189 None:intergenic 15.0%
!! GAATTAGGTTATAAAAATAA+GGG - chr7_1:22697231-22697250 None:intergenic 15.0%
!! ATAACATCAAATTGATTAAA+TGG + chr7_1:22697308-22697327 Msa1014280:intron 15.0%
!! TAACATCAAATTGATTAAAT+GGG + chr7_1:22697309-22697328 Msa1014280:intron 15.0%
!!! GAATATATCATTTTTTTATG+TGG + chr7_1:22697504-22697523 Msa1014280:intron 15.0%
!! AAAAAATATATATAAACGTC+CGG + chr7_1:22697563-22697582 Msa1014280:intron 15.0%
!!! AATCTTTATTTTTTTCAAGA+AGG - chr7_1:22697598-22697617 None:intergenic 15.0%
!! AATAACTATAGATAAAACTT+AGG - chr7_1:22698011-22698030 None:intergenic 15.0%
!!! GGTTTTATTATATACACTAT+TGG + chr7_1:22696967-22696986 Msa1014280:intron 20.0%
!!! ATAATTTTTTAGCATTCTTC+TGG + chr7_1:22697025-22697044 Msa1014280:intron 20.0%
!! GGAATTAGGTTATAAAAATA+AGG - chr7_1:22697232-22697251 None:intergenic 20.0%
!! AAGATAAACGTTTCAATAAT+GGG + chr7_1:22697279-22697298 Msa1014280:intron 20.0%
!!! TTTTTTATGTGGATTTTATG+TGG + chr7_1:22697515-22697534 Msa1014280:intron 20.0%
!!! TTTTTATGTGGATTTTATGT+GGG + chr7_1:22697516-22697535 Msa1014280:intron 20.0%
!!! CAAAGAGACTTTTAAAAAAA+CGG - chr7_1:22697748-22697767 None:intergenic 20.0%
!! AAAAATAACATATCTATCGT+AGG - chr7_1:22697957-22697976 None:intergenic 20.0%
!! AAAATGTAGTTGAGAATAAT+TGG + chr7_1:22698259-22698278 Msa1014280:CDS 20.0%
!! TCATCACTAATATTAACATT+TGG - chr7_1:22698408-22698427 None:intergenic 20.0%
!!! GGTTTTATTATATACACTAT+TGG + chr7_1:22696967-22696986 Msa1014280:intron 20.0%
!!! ATAATTTTTTAGCATTCTTC+TGG + chr7_1:22697025-22697044 Msa1014280:intron 20.0%
!! GGAATTAGGTTATAAAAATA+AGG - chr7_1:22697232-22697251 None:intergenic 20.0%
!! AAGATAAACGTTTCAATAAT+GGG + chr7_1:22697279-22697298 Msa1014280:intron 20.0%
!!! TTTTTTATGTGGATTTTATG+TGG + chr7_1:22697515-22697534 Msa1014280:intron 20.0%
!!! TTTTTATGTGGATTTTATGT+GGG + chr7_1:22697516-22697535 Msa1014280:intron 20.0%
!!! CAAAGAGACTTTTAAAAAAA+CGG - chr7_1:22697748-22697767 None:intergenic 20.0%
!! AAAAATAACATATCTATCGT+AGG - chr7_1:22697957-22697976 None:intergenic 20.0%
!! AAAATGTAGTTGAGAATAAT+TGG + chr7_1:22698259-22698278 Msa1014280:CDS 20.0%
!! TCATCACTAATATTAACATT+TGG - chr7_1:22698408-22698427 None:intergenic 20.0%
! GAAGATAAACGTTTCAATAA+TGG + chr7_1:22697278-22697297 Msa1014280:intron 25.0%
! AGATAAACGTTTCAATAATG+GGG + chr7_1:22697280-22697299 Msa1014280:intron 25.0%
!!! TTCAATTTGCAGTTTTAGTT+GGG + chr7_1:22697385-22697404 Msa1014280:intron 25.0%
! TATAATAGCCCAAATTCAAT+TGG + chr7_1:22697442-22697461 Msa1014280:intron 25.0%
! TACTACATTAGCATTATTCA+AGG + chr7_1:22697540-22697559 Msa1014280:intron 25.0%
! TCTAATCTTCTTCTTAAATG+CGG + chr7_1:22697654-22697673 Msa1014280:intron 25.0%
!! ATTCAATTTTCTATCGACAT+TGG + chr7_1:22697694-22697713 Msa1014280:intron 25.0%
! TCTTTGAATTTAGCTAATGT+AGG + chr7_1:22697762-22697781 Msa1014280:intron 25.0%
! CACTAATATTAACATTTGGT+TGG - chr7_1:22698404-22698423 None:intergenic 25.0%
! GAAGATAAACGTTTCAATAA+TGG + chr7_1:22697278-22697297 Msa1014280:intron 25.0%
! AGATAAACGTTTCAATAATG+GGG + chr7_1:22697280-22697299 Msa1014280:intron 25.0%
!!! TTCAATTTGCAGTTTTAGTT+GGG + chr7_1:22697385-22697404 Msa1014280:intron 25.0%
! TATAATAGCCCAAATTCAAT+TGG + chr7_1:22697442-22697461 Msa1014280:intron 25.0%
! TACTACATTAGCATTATTCA+AGG + chr7_1:22697540-22697559 Msa1014280:intron 25.0%
! TCTAATCTTCTTCTTAAATG+CGG + chr7_1:22697654-22697673 Msa1014280:intron 25.0%
!! ATTCAATTTTCTATCGACAT+TGG + chr7_1:22697694-22697713 Msa1014280:intron 25.0%
! TCTTTGAATTTAGCTAATGT+AGG + chr7_1:22697762-22697781 Msa1014280:intron 25.0%
! CACTAATATTAACATTTGGT+TGG - chr7_1:22698404-22698423 None:intergenic 25.0%
CAGAGAACAAATATGTCAAA+TGG + chr7_1:22696863-22696882 Msa1014280:intron 30.0%
!! ACATGCAAAAGCATTATATG+TGG - chr7_1:22697198-22697217 None:intergenic 30.0%
!! CTTCAATTTGCAGTTTTAGT+TGG + chr7_1:22697384-22697403 Msa1014280:intron 30.0%
GGAACTATCCAATTGAATTT+GGG - chr7_1:22697453-22697472 None:intergenic 30.0%
TGGAACTATCCAATTGAATT+TGG - chr7_1:22697454-22697473 None:intergenic 30.0%
CATATCTATCGTAGGATTTA+AGG - chr7_1:22697949-22697968 None:intergenic 30.0%
GTACATATATGTTGCATCTT+AGG - chr7_1:22697989-22698008 None:intergenic 30.0%
AGCGTTCAAAATTAACAAGA+AGG - chr7_1:22698113-22698132 None:intergenic 30.0%
! TATTTCTTTTGTATGCTTGC+AGG + chr7_1:22698188-22698207 Msa1014280:intron 30.0%
!!! GTTTCTTCTTTTTTACTCCA+TGG - chr7_1:22698219-22698238 None:intergenic 30.0%
GAAATTGTTAAGAGATTTCC+AGG + chr7_1:22698285-22698304 Msa1014280:CDS 30.0%
TTCAGAGTGTGATTATGAAA+TGG + chr7_1:22698431-22698450 Msa1014280:CDS 30.0%
CAGAGAACAAATATGTCAAA+TGG + chr7_1:22696863-22696882 Msa1014280:intron 30.0%
!! ACATGCAAAAGCATTATATG+TGG - chr7_1:22697198-22697217 None:intergenic 30.0%
!! CTTCAATTTGCAGTTTTAGT+TGG + chr7_1:22697384-22697403 Msa1014280:intron 30.0%
GGAACTATCCAATTGAATTT+GGG - chr7_1:22697453-22697472 None:intergenic 30.0%
TGGAACTATCCAATTGAATT+TGG - chr7_1:22697454-22697473 None:intergenic 30.0%
CATATCTATCGTAGGATTTA+AGG - chr7_1:22697949-22697968 None:intergenic 30.0%
GTACATATATGTTGCATCTT+AGG - chr7_1:22697989-22698008 None:intergenic 30.0%
AGCGTTCAAAATTAACAAGA+AGG - chr7_1:22698113-22698132 None:intergenic 30.0%
! TATTTCTTTTGTATGCTTGC+AGG + chr7_1:22698188-22698207 Msa1014280:intron 30.0%
!!! GTTTCTTCTTTTTTACTCCA+TGG - chr7_1:22698219-22698238 None:intergenic 30.0%
GAAATTGTTAAGAGATTTCC+AGG + chr7_1:22698285-22698304 Msa1014280:CDS 30.0%
TTCAGAGTGTGATTATGAAA+TGG + chr7_1:22698431-22698450 Msa1014280:CDS 30.0%
CAAGCTTGTAATAAGAGATC+GGG - chr7_1:22696828-22696847 None:intergenic 35.0%
GCAAGCTTGTAATAAGAGAT+CGG - chr7_1:22696829-22696848 None:intergenic 35.0%
!! TAGCATTCTTCTGGAATCTA+TGG + chr7_1:22697034-22697053 Msa1014280:intron 35.0%
!! AGCATTCTTCTGGAATCTAT+GGG + chr7_1:22697035-22697054 Msa1014280:intron 35.0%
! GTTGCTTTGAGCTTAAAGAA+TGG + chr7_1:22697057-22697076 Msa1014280:CDS 35.0%
CATATTGCTACCTTTCTAGA+TGG + chr7_1:22697083-22697102 Msa1014280:CDS 35.0%
CAAGACTGAAAAACAATGCA+GGG + chr7_1:22697106-22697125 Msa1014280:CDS 35.0%
GAGAGGACAAAATTGGAATT+AGG - chr7_1:22697246-22697265 None:intergenic 35.0%
TGGATAGTTCCAAATCAAAC+AGG + chr7_1:22697462-22697481 Msa1014280:intron 35.0%
GGATAGTTCCAAATCAAACA+GGG + chr7_1:22697463-22697482 Msa1014280:intron 35.0%
GTAACTTTCCCTGTTTGATT+TGG - chr7_1:22697474-22697493 None:intergenic 35.0%
! TTCAAGAAGGCATAACATTC+CGG - chr7_1:22697585-22697604 None:intergenic 35.0%
TCTTAACTGAACTCTCAGTA+CGG - chr7_1:22698311-22698330 None:intergenic 35.0%
AGAGTTCAGTTAAGAACCAT+TGG + chr7_1:22698316-22698335 Msa1014280:CDS 35.0%
CAAGAACAACTCAATGAACA+CGG + chr7_1:22698365-22698384 Msa1014280:CDS 35.0%
!!! TGAAATGGAGTTTTTTCCTG+AGG + chr7_1:22698446-22698465 Msa1014280:CDS 35.0%
CAAGCTTGTAATAAGAGATC+GGG - chr7_1:22696828-22696847 None:intergenic 35.0%
GCAAGCTTGTAATAAGAGAT+CGG - chr7_1:22696829-22696848 None:intergenic 35.0%
!! TAGCATTCTTCTGGAATCTA+TGG + chr7_1:22697034-22697053 Msa1014280:intron 35.0%
!! AGCATTCTTCTGGAATCTAT+GGG + chr7_1:22697035-22697054 Msa1014280:intron 35.0%
! GTTGCTTTGAGCTTAAAGAA+TGG + chr7_1:22697057-22697076 Msa1014280:CDS 35.0%
CATATTGCTACCTTTCTAGA+TGG + chr7_1:22697083-22697102 Msa1014280:CDS 35.0%
CAAGACTGAAAAACAATGCA+GGG + chr7_1:22697106-22697125 Msa1014280:CDS 35.0%
GAGAGGACAAAATTGGAATT+AGG - chr7_1:22697246-22697265 None:intergenic 35.0%
TGGATAGTTCCAAATCAAAC+AGG + chr7_1:22697462-22697481 Msa1014280:intron 35.0%
GGATAGTTCCAAATCAAACA+GGG + chr7_1:22697463-22697482 Msa1014280:intron 35.0%
GTAACTTTCCCTGTTTGATT+TGG - chr7_1:22697474-22697493 None:intergenic 35.0%
! TTCAAGAAGGCATAACATTC+CGG - chr7_1:22697585-22697604 None:intergenic 35.0%
TCTTAACTGAACTCTCAGTA+CGG - chr7_1:22698311-22698330 None:intergenic 35.0%
AGAGTTCAGTTAAGAACCAT+TGG + chr7_1:22698316-22698335 Msa1014280:CDS 35.0%
CAAGAACAACTCAATGAACA+CGG + chr7_1:22698365-22698384 Msa1014280:CDS 35.0%
!!! TGAAATGGAGTTTTTTCCTG+AGG + chr7_1:22698446-22698465 Msa1014280:CDS 35.0%
TTGTAGCGAAACTAGAGTGA+TGG - chr7_1:22696771-22696790 None:intergenic 40.0%
GTACATGGAGAATAGGTTGT+TGG - chr7_1:22696806-22696825 None:intergenic 40.0%
GTAATAAGAGATCGGGTACA+TGG - chr7_1:22696821-22696840 None:intergenic 40.0%
CAAATATGTCAAATGGACCG+CGG + chr7_1:22696870-22696889 Msa1014280:intron 40.0%
TTCAGTCTTGCCATCTAGAA+AGG - chr7_1:22697096-22697115 None:intergenic 40.0%
GCAAGACTGAAAAACAATGC+AGG + chr7_1:22697105-22697124 Msa1014280:CDS 40.0%
AAAAACAATGCAGGGAGAGA+TGG + chr7_1:22697114-22697133 Msa1014280:CDS 40.0%
CTATCTTCGACCAGATACTA+AGG + chr7_1:22697142-22697161 Msa1014280:CDS 40.0%
AAGATAGGCACCTTAGTATC+TGG - chr7_1:22697155-22697174 None:intergenic 40.0%
TGTGAGTGAGAGGACAAAAT+TGG - chr7_1:22697253-22697272 None:intergenic 40.0%
TCTTCATTCTTGTGAGTGAG+AGG - chr7_1:22697263-22697282 None:intergenic 40.0%
ATATTAGCACATAAGACCCG+TGG + chr7_1:22697886-22697905 Msa1014280:intron 40.0%
TATTAGCACATAAGACCCGT+GGG + chr7_1:22697887-22697906 Msa1014280:intron 40.0%
TTGAACGCTTGAATCACACA+CGG + chr7_1:22698124-22698143 Msa1014280:intron 40.0%
! TTGAGTTGTTCTTGGCATTC+CGG - chr7_1:22698359-22698378 None:intergenic 40.0%
! CGTGTTCATTGAGTTGTTCT+TGG - chr7_1:22698367-22698386 None:intergenic 40.0%
TTGTAGCGAAACTAGAGTGA+TGG - chr7_1:22696771-22696790 None:intergenic 40.0%
GTACATGGAGAATAGGTTGT+TGG - chr7_1:22696806-22696825 None:intergenic 40.0%
GTAATAAGAGATCGGGTACA+TGG - chr7_1:22696821-22696840 None:intergenic 40.0%
CAAATATGTCAAATGGACCG+CGG + chr7_1:22696870-22696889 Msa1014280:intron 40.0%
TTCAGTCTTGCCATCTAGAA+AGG - chr7_1:22697096-22697115 None:intergenic 40.0%
GCAAGACTGAAAAACAATGC+AGG + chr7_1:22697105-22697124 Msa1014280:CDS 40.0%
AAAAACAATGCAGGGAGAGA+TGG + chr7_1:22697114-22697133 Msa1014280:CDS 40.0%
CTATCTTCGACCAGATACTA+AGG + chr7_1:22697142-22697161 Msa1014280:CDS 40.0%
AAGATAGGCACCTTAGTATC+TGG - chr7_1:22697155-22697174 None:intergenic 40.0%
TGTGAGTGAGAGGACAAAAT+TGG - chr7_1:22697253-22697272 None:intergenic 40.0%
TCTTCATTCTTGTGAGTGAG+AGG - chr7_1:22697263-22697282 None:intergenic 40.0%
ATATTAGCACATAAGACCCG+TGG + chr7_1:22697886-22697905 Msa1014280:intron 40.0%
TATTAGCACATAAGACCCGT+GGG + chr7_1:22697887-22697906 Msa1014280:intron 40.0%
TTGAACGCTTGAATCACACA+CGG + chr7_1:22698124-22698143 Msa1014280:intron 40.0%
! TTGAGTTGTTCTTGGCATTC+CGG - chr7_1:22698359-22698378 None:intergenic 40.0%
! CGTGTTCATTGAGTTGTTCT+TGG - chr7_1:22698367-22698386 None:intergenic 40.0%
CATGGAGAATAGGTTGTTGG+AGG - chr7_1:22696803-22696822 None:intergenic 45.0%
AGATCGGGTACATGGAGAAT+AGG - chr7_1:22696813-22696832 None:intergenic 45.0%
GATATACCTATCCTCTTCCG+CGG - chr7_1:22696890-22696909 None:intergenic 45.0%
TGCATACCTTCGATGTACAG+TGG + chr7_1:22697630-22697649 Msa1014280:intron 45.0%
TTAGAGCCACTGTACATCGA+AGG - chr7_1:22697639-22697658 None:intergenic 45.0%
TATGCTTGCAGGATGAACCA+TGG + chr7_1:22698199-22698218 Msa1014280:intron 45.0%
! TCCTGAGGTTTTTATGCAGC+AGG + chr7_1:22698461-22698480 Msa1014280:CDS 45.0%
TCCTGCTGCATAAAAACCTC+AGG - chr7_1:22698465-22698484 None:intergenic 45.0%
CATGGAGAATAGGTTGTTGG+AGG - chr7_1:22696803-22696822 None:intergenic 45.0%
AGATCGGGTACATGGAGAAT+AGG - chr7_1:22696813-22696832 None:intergenic 45.0%
GATATACCTATCCTCTTCCG+CGG - chr7_1:22696890-22696909 None:intergenic 45.0%
TGCATACCTTCGATGTACAG+TGG + chr7_1:22697630-22697649 Msa1014280:intron 45.0%
TTAGAGCCACTGTACATCGA+AGG - chr7_1:22697639-22697658 None:intergenic 45.0%
TATGCTTGCAGGATGAACCA+TGG + chr7_1:22698199-22698218 Msa1014280:intron 45.0%
! TCCTGAGGTTTTTATGCAGC+AGG + chr7_1:22698461-22698480 Msa1014280:CDS 45.0%
TCCTGCTGCATAAAAACCTC+AGG - chr7_1:22698465-22698484 None:intergenic 45.0%
AAAACTAGACTGCCGACCCA+CGG - chr7_1:22697906-22697925 None:intergenic 50.0%
CACGCTCAATGGCATTCCAA+TGG - chr7_1:22698335-22698354 None:intergenic 50.0%
AAAACTAGACTGCCGACCCA+CGG - chr7_1:22697906-22697925 None:intergenic 50.0%
CACGCTCAATGGCATTCCAA+TGG - chr7_1:22698335-22698354 None:intergenic 50.0%
TGTCAAATGGACCGCGGAAG+AGG + chr7_1:22696876-22696895 Msa1014280:intron 55.0%
AATGGACCGCGGAAGAGGAT+AGG + chr7_1:22696881-22696900 Msa1014280:intron 55.0%
AGCACATAAGACCCGTGGGT+CGG + chr7_1:22697891-22697910 Msa1014280:intron 55.0%
AAACTAGACTGCCGACCCAC+GGG - chr7_1:22697905-22697924 None:intergenic 55.0%
ACTGAACTCTCAGTACGGCC+TGG - chr7_1:22698306-22698325 None:intergenic 55.0%
GGAATGCCATTGAGCGTGTC+CGG + chr7_1:22698337-22698356 Msa1014280:CDS 55.0%
TGTCAAATGGACCGCGGAAG+AGG + chr7_1:22696876-22696895 Msa1014280:intron 55.0%
AATGGACCGCGGAAGAGGAT+AGG + chr7_1:22696881-22696900 Msa1014280:intron 55.0%
AGCACATAAGACCCGTGGGT+CGG + chr7_1:22697891-22697910 Msa1014280:intron 55.0%
AAACTAGACTGCCGACCCAC+GGG - chr7_1:22697905-22697924 None:intergenic 55.0%
ACTGAACTCTCAGTACGGCC+TGG - chr7_1:22698306-22698325 None:intergenic 55.0%
GGAATGCCATTGAGCGTGTC+CGG + chr7_1:22698337-22698356 Msa1014280:CDS 55.0%
GGCATTCCGGACACGCTCAA+TGG - chr7_1:22698346-22698365 None:intergenic 60.0%
GGCATTCCGGACACGCTCAA+TGG - chr7_1:22698346-22698365 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 22696758 22698521 22696758 ID=Msa1014280;Name=Msa1014280
chr7_1 mRNA 22696758 22698521 22696758 ID=Msa1014280-mRNA-1;Parent=Msa1014280;Name=Msa1014280-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|0.66|1|1|3|0|147
chr7_1 exon 22696758 22696762 22696758 ID=Msa1014280-mRNA-1:exon:5307;Parent=Msa1014280-mRNA-1
chr7_1 exon 22697037 22697163 22697037 ID=Msa1014280-mRNA-1:exon:5308;Parent=Msa1014280-mRNA-1
chr7_1 exon 22698210 22698521 22698210 ID=Msa1014280-mRNA-1:exon:5309;Parent=Msa1014280-mRNA-1
chr7_1 CDS 22696758 22696762 22696758 ID=Msa1014280-mRNA-1:cds;Parent=Msa1014280-mRNA-1
chr7_1 CDS 22697037 22697163 22697037 ID=Msa1014280-mRNA-1:cds;Parent=Msa1014280-mRNA-1
chr7_1 CDS 22698210 22698521 22698210 ID=Msa1014280-mRNA-1:cds;Parent=Msa1014280-mRNA-1
Gene Sequence

>Msa1014280

ATGGGCATTCTTCTGGAATCTATGGGTTGCTTTGAGCTTAAAGAATGGTCACATATTGCTACCTTTCTAGATGGCAAGACTGAAAAACAATGCAGGGAGAGATGGTATAACTATCTTCGACCAGATACTAAGGATGAACCATGGAGTAAAAAAGAAGAAACTATACTACTTGAACTTCAGAAAAATGTAGTTGAGAATAATTGGACTGAAATTGTTAAGAGATTTCCAGGCCGTACTGAGAGTTCAGTTAAGAACCATTGGAATGCCATTGAGCGTGTCCGGAATGCCAAGAACAACTCAATGAACACGGCTAATGTTGAAAACCAACCAAATGTTAATATTAGTGATGAAAGTTCAGAGTGTGATTATGAAATGGAGTTTTTTCCTGAGGTTTTTATGCAGCAGGAAATTGATTTCATGAAGAAGTCGTTTAGCAACCTTTAA
Protein sequence

>Msa1014280

MGILLESMGCFELKEWSHIATFLDGKTEKQCRERWYNYLRPDTKDEPWSKKEETILLELQKNVVENNWTEIVKRFPGRTESSVKNHWNAIERVRNAKNNSMNTANVENQPNVNISDESSECDYEMEFFPEVFMQQEIDFMKKSFSNL*