AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1015090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1015090 MtrunA17_Chr7g0228231 97.596 208 4 1 1 207 1 208 4.15e-150 415
Msa1015090 MtrunA17_Chr6g0450101 74.654 217 37 6 1 207 1 209 5.99e-106 303
Msa1015090 MtrunA17_Chr1g0209661 75.630 119 28 1 3 120 15 133 2.05e-65 204
Msa1015090 MtrunA17_Chr1g0194291 64.662 133 47 0 1 133 8 140 3.06e-60 189
Msa1015090 MtrunA17_Chr2g0293911 82.301 113 20 0 8 120 18 130 2.21e-59 189
Msa1015090 MtrunA17_Chr4g0068921 73.810 126 33 0 7 132 17 142 2.77e-58 182
Msa1015090 MtrunA17_Chr1g0194301 73.832 107 28 0 14 120 33 139 3.99e-58 184
Msa1015090 MtrunA17_Chr1g0168661 70.476 105 31 0 15 119 22 126 2.00e-52 169
Msa1015090 MtrunA17_Chr1g0186061 67.619 105 34 0 15 119 21 125 6.29e-50 162
Msa1015090 MtrunA17_Chr7g0275911 59.200 125 49 1 1 125 1 123 6.88e-47 155
Msa1015090 MtrunA17_Chr5g0410961 66.667 105 35 0 14 118 12 116 2.94e-46 155
Msa1015090 MtrunA17_Chr4g0068061 66.667 105 35 0 14 118 12 116 3.60e-46 155
Msa1015090 MtrunA17_Chr2g0327821 56.303 119 50 1 13 129 5 123 6.57e-46 151
Msa1015090 MtrunA17_Chr8g0346561 57.364 129 49 1 14 142 12 134 6.91e-46 153
Msa1015090 MtrunA17_Chr2g0330041 59.483 116 45 1 1 116 1 114 9.43e-46 155
Msa1015090 MtrunA17_Chr8g0387421 43.434 198 98 4 1 189 1 193 1.21e-45 153
Msa1015090 MtrunA17_Chr4g0039971 63.551 107 39 0 14 120 13 119 1.83e-45 154
Msa1015090 MtrunA17_Chr4g0032401 44.385 187 88 4 14 192 17 195 3.05e-45 152
Msa1015090 MtrunA17_Chr2g0323411 62.963 108 40 0 14 121 12 119 3.65e-45 152
Msa1015090 MtrunA17_Chr8g0385321 61.017 118 44 1 1 118 1 116 7.52e-45 151
Msa1015090 MtrunA17_Chr1g0203411 56.198 121 51 1 1 121 1 119 1.30e-44 150
Msa1015090 MtrunA17_Chr4g0070641 48.750 160 69 2 1 160 1 147 2.99e-44 145
Msa1015090 MtrunA17_Chr5g0395281 58.407 113 47 0 8 120 6 118 3.15e-44 149
Msa1015090 MtrunA17_Chr4g0037141 53.425 146 55 1 16 148 14 159 3.37e-44 149
Msa1015090 MtrunA17_Chr4g0070611 58.824 119 47 1 1 119 1 117 3.87e-44 149
Msa1015090 MtrunA17_Chr1g0180391 60.748 107 42 0 13 119 18 124 4.36e-44 147
Msa1015090 MtrunA17_Chr1g0187761 51.471 136 66 0 14 149 12 147 4.41e-44 147
Msa1015090 MtrunA17_Chr3g0099131 55.556 117 52 0 13 129 40 156 4.44e-44 154
Msa1015090 MtrunA17_Chr3g0131121 60.169 118 45 1 1 118 1 116 8.30e-44 148
Msa1015090 MtrunA17_Chr1g0193371 57.025 121 50 1 1 121 1 119 9.60e-44 149
Msa1015090 MtrunA17_Chr8g0349261 63.208 106 38 1 14 118 13 118 9.75e-44 148
Msa1015090 MtrunA17_Chr2g0281071 62.857 105 39 0 14 118 13 117 1.34e-43 149
Msa1015090 MtrunA17_Chr4g0030881 57.522 113 41 1 15 120 8 120 1.60e-43 146
Msa1015090 MtrunA17_Chr8g0354661 62.136 103 39 0 14 116 37 139 1.98e-43 152
Msa1015090 MtrunA17_Chr1g0167691 60.952 105 41 0 14 118 12 116 2.09e-43 145
Msa1015090 MtrunA17_Chr7g0228891 61.321 106 41 0 14 119 12 117 2.72e-43 146
Msa1015090 MtrunA17_Chr7g0270891 41.315 213 89 6 1 192 1 198 2.84e-43 148
Msa1015090 MtrunA17_Chr7g0274581 56.881 109 47 0 14 122 12 120 3.32e-43 144
Msa1015090 MtrunA17_Chr1g0193801 43.814 194 83 5 1 172 1 190 3.53e-43 149
Msa1015090 MtrunA17_Chr1g0167661 52.239 134 58 1 14 141 12 145 4.20e-43 145
Msa1015090 MtrunA17_Chr5g0397231 59.821 112 43 1 1 112 1 110 4.52e-43 147
Msa1015090 MtrunA17_Chr3g0110351 60.748 107 42 0 14 120 12 118 4.95e-43 146
Msa1015090 MtrunA17_Chr5g0434571 60.748 107 42 0 14 120 48 154 6.23e-43 147
Msa1015090 MtrunA17_Chr7g0261281 61.682 107 41 0 14 120 12 118 6.23e-43 145
Msa1015090 MtrunA17_Chr4g0022901 49.342 152 74 2 7 157 6 155 6.35e-43 145
Msa1015090 MtrunA17_Chr1g0154031 50.735 136 67 0 14 149 76 211 7.81e-43 148
Msa1015090 MtrunA17_Chr4g0057031 61.905 105 40 0 14 118 12 116 1.11e-42 144
Msa1015090 MtrunA17_Chr8g0342541 55.932 118 50 1 1 118 1 116 1.32e-42 146
Msa1015090 MtrunA17_Chr4g0048511 61.905 105 40 0 14 118 13 117 1.46e-42 146
Msa1015090 MtrunA17_Chr3g0080861 55.556 108 48 0 14 121 37 144 1.62e-42 149
Msa1015090 MtrunA17_Chr4g0022931 51.852 135 64 1 14 147 13 147 2.26e-42 144
Msa1015090 MtrunA17_Chr1g0203441 54.237 118 54 0 12 129 11 128 2.63e-42 143
Msa1015090 MtrunA17_Chr3g0115821 58.879 107 44 0 14 120 12 118 2.90e-42 145
Msa1015090 MtrunA17_Chr5g0435101 56.034 116 49 1 3 118 2 115 3.10e-42 141
Msa1015090 MtrunA17_Chr3g0121241 60.952 105 41 0 14 118 42 146 3.64e-42 144
Msa1015090 MtrunA17_Chr7g0217741 59.813 107 43 0 14 120 12 118 4.47e-42 144
Msa1015090 MtrunA17_Chr8g0342521 55.932 118 50 1 1 118 1 116 6.39e-42 144
Msa1015090 MtrunA17_Chr2g0309911 41.176 204 94 5 6 188 5 203 6.69e-42 143
Msa1015090 MtrunA17_Chr4g0022911 48.684 152 70 2 14 157 13 164 8.56e-42 142
Msa1015090 MtrunA17_Chr2g0328771 57.547 106 45 0 14 119 20 125 1.00e-41 143
Msa1015090 MtrunA17_Chr4g0044421 56.780 118 49 1 1 118 1 116 1.39e-41 139
Msa1015090 MtrunA17_Chr8g0343831 59.259 108 44 0 13 120 7 114 2.05e-41 140
Msa1015090 MtrunA17_Chr1g0194951 47.368 152 54 1 14 165 12 137 2.08e-41 144
Msa1015090 MtrunA17_Chr1g0151941 57.547 106 44 1 14 118 12 117 5.51e-41 139
Msa1015090 MtrunA17_Chr6g0453471 58.879 107 44 0 14 120 12 118 6.19e-41 142
Msa1015090 MtrunA17_Chr3g0088461 56.604 106 46 0 14 119 22 127 6.98e-41 141
Msa1015090 MtrunA17_Chr7g0217221 53.043 115 54 0 14 128 12 126 1.20e-40 139
Msa1015090 MtrunA17_Chr1g0211161 55.172 116 50 1 3 118 4 117 1.53e-40 137
Msa1015090 MtrunA17_Chr6g0452271 57.547 106 45 0 13 118 11 116 1.55e-40 140
Msa1015090 MtrunA17_Chr3g0092401 57.009 107 46 0 14 120 13 119 1.57e-40 140
Msa1015090 MtrunA17_Chr3g0117091 54.167 120 53 1 1 120 1 118 2.04e-40 140
Msa1015090 MtrunA17_Chr7g0271241 60.000 110 42 1 1 110 1 108 2.36e-40 141
Msa1015090 MtrunA17_Chr2g0323351 60.952 105 41 0 14 118 12 116 3.79e-40 137
Msa1015090 MtrunA17_Chr8g0342481 52.846 123 57 1 14 135 12 134 4.54e-40 140
Msa1015090 MtrunA17_Chr7g0254411 55.140 107 48 0 14 120 12 118 5.60e-40 139
Msa1015090 MtrunA17_Chr4g0042671 58.879 107 44 0 14 120 12 118 8.60e-40 140
Msa1015090 MtrunA17_Chr4g0058631 42.604 169 93 3 1 167 1 167 9.11e-40 139
Msa1015090 MtrunA17_Chr4g0060721 51.261 119 56 1 14 132 13 129 1.55e-39 138
Msa1015090 MtrunA17_Chr4g0022881 54.783 115 52 0 14 128 12 126 2.89e-39 134
Msa1015090 MtrunA17_Chr2g0311221 58.879 107 41 1 6 112 9 112 3.03e-39 137
Msa1015090 MtrunA17_Chr6g0453211 55.652 115 51 0 14 128 12 126 3.04e-39 137
Msa1015090 MtrunA17_Chr6g0470971 46.715 137 73 0 10 146 10 146 1.14e-38 134
Msa1015090 MtrunA17_Chr4g0055981 47.059 153 72 3 14 162 55 202 2.58e-38 132
Msa1015090 MtrunA17_Chr3g0135311 46.061 165 74 4 13 174 11 163 4.95e-38 134
Msa1015090 MtrunA17_Chr2g0322521 57.018 114 45 1 7 116 18 131 6.54e-38 135
Msa1015090 MtrunA17_Chr7g0269831 61.905 105 40 0 14 118 12 116 7.63e-38 134
Msa1015090 MtrunA17_Chr1g0152011 43.827 162 81 5 13 164 11 172 2.51e-37 132
Msa1015090 MtrunA17_Chr4g0022891 56.863 102 44 0 14 115 12 113 4.17e-37 129
Msa1015090 MtrunA17_Chr3g0103281 53.774 106 49 0 13 118 11 116 9.16e-37 130
Msa1015090 MtrunA17_Chr4g0028311 56.604 106 45 1 14 118 12 117 2.14e-36 129
Msa1015090 MtrunA17_Chr7g0240821 35.874 223 109 5 18 206 5 227 2.28e-36 127
Msa1015090 MtrunA17_Chr1g0192411 53.774 106 49 0 14 119 12 117 4.93e-36 130
Msa1015090 MtrunA17_Chr2g0327351 59.406 101 40 1 13 112 11 111 5.51e-36 128
Msa1015090 MtrunA17_Chr5g0417821 54.545 110 50 0 9 118 2 111 8.07e-36 127
Msa1015090 MtrunA17_Chr5g0441131 39.759 166 88 4 7 162 2 165 8.60e-36 124
Msa1015090 MtrunA17_Chr5g0400821 55.140 107 47 1 13 118 11 117 1.11e-35 127
Msa1015090 MtrunA17_Chr7g0264641 54.206 107 48 1 13 118 11 117 6.71e-35 124
Msa1015090 MtrunA17_Chr5g0440781 51.429 105 50 1 13 116 11 115 1.18e-34 121
Msa1015090 MtrunA17_Chr4g0054391 44.022 184 86 7 13 192 11 181 3.17e-34 123
Msa1015090 MtrunA17_Chr5g0440761 51.429 105 50 1 13 116 11 115 4.73e-34 122
Msa1015090 MtrunA17_Chr5g0441141 51.429 105 50 1 13 116 11 115 5.56e-34 122
Msa1015090 MtrunA17_Chr8g0334881 51.485 101 48 1 14 113 10 110 7.71e-34 122
Msa1015090 MtrunA17_Chr4g0072751 57.426 101 42 1 13 112 11 111 1.46e-33 122
Msa1015090 MtrunA17_Chr4g0013361 34.911 169 94 4 14 174 10 170 6.87e-33 119
Msa1015090 MtrunA17_Chr8g0360111 54.455 101 46 0 14 114 25 125 2.22e-32 117
Msa1015090 MtrunA17_Chr5g0434931 51.429 105 51 0 14 118 35 139 3.03e-32 117
Msa1015090 MtrunA17_Chr7g0247131 66.216 74 25 0 46 119 10 83 5.18e-32 117
Msa1015090 MtrunA17_Chr6g0487491 51.786 112 45 2 14 116 12 123 5.79e-32 116
Msa1015090 MtrunA17_Chr3g0099141 52.941 85 40 0 11 95 37 121 6.59e-32 113
Msa1015090 MtrunA17_Chr5g0434831 51.429 105 51 0 14 118 7 111 8.29e-32 114
Msa1015090 MtrunA17_Chr5g0434911 51.429 105 51 0 14 118 21 125 9.03e-32 116
Msa1015090 MtrunA17_Chr7g0228991 51.429 105 51 0 14 118 29 133 4.34e-31 114
Msa1015090 MtrunA17_Chr7g0220341 50.442 113 52 2 14 122 25 137 9.20e-31 114
Msa1015090 MtrunA17_Chr5g0434841 50.476 105 52 0 14 118 20 124 2.67e-30 113
Msa1015090 MtrunA17_Chr2g0294811 57.831 83 35 0 8 90 6 88 5.71e-29 104
Msa1015090 MtrunA17_Chr6g0454921 50.495 101 49 1 10 110 9 108 1.32e-27 103
Msa1015090 MtrunA17_Chr8g0342531 51.648 91 42 1 1 91 1 89 3.61e-27 101
Msa1015090 MtrunA17_Chr2g0323321 58.025 81 34 0 14 94 11 91 4.28e-27 99.8
Msa1015090 MtrunA17_Chr8g0342511 51.685 89 41 1 1 89 1 87 7.96e-27 98.6
Msa1015090 MtrunA17_Chr4g0042611 58.442 77 32 0 14 90 12 88 1.12e-26 97.8
Msa1015090 MtrunA17_Chr4g0053431 34.896 192 110 5 16 203 5 185 1.14e-26 102
Msa1015090 MtrunA17_Chr5g0425591 50.000 90 44 1 7 95 2 91 1.34e-26 97.8
Msa1015090 MtrunA17_Chr7g0238631 45.370 108 58 1 11 118 108 214 2.41e-26 105
Msa1015090 MtrunA17_Chr7g0238631 37.736 106 64 2 16 120 61 165 1.16e-12 66.2
Msa1015090 MtrunA17_Chr5g0401731 40.411 146 72 3 16 161 15 145 2.76e-26 103
Msa1015090 MtrunA17_Chr4g0008551 47.525 101 52 1 16 116 38 137 3.31e-26 103
Msa1015090 MtrunA17_Chr5g0395221 54.545 77 35 0 14 90 12 88 1.28e-25 95.1
Msa1015090 MtrunA17_Chr8g0342461 51.087 92 42 2 1 91 1 90 1.36e-25 96.7
Msa1015090 MtrunA17_Chr3g0139671 38.571 140 80 3 11 148 80 215 3.22e-25 102
Msa1015090 MtrunA17_Chr3g0139671 33.333 114 74 2 16 128 33 145 3.10e-11 62.0
Msa1015090 MtrunA17_Chr8g0342471 51.087 92 42 2 1 91 1 90 3.39e-25 95.9
Msa1015090 MtrunA17_Chr3g0133601 45.545 101 54 1 16 116 37 136 3.73e-25 97.8
Msa1015090 MtrunA17_Chr5g0429661 40.278 144 77 3 16 153 122 262 4.29e-25 100
Msa1015090 MtrunA17_Chr1g0157731 40.741 108 63 1 11 118 86 192 7.46e-25 101
Msa1015090 MtrunA17_Chr1g0157731 33.333 114 74 2 16 128 39 151 4.68e-11 61.6
Msa1015090 MtrunA17_Chr6g0460661 45.263 95 51 1 16 110 16 109 4.90e-24 93.2
Msa1015090 MtrunA17_Chr3g0117511 37.815 119 73 1 16 134 183 300 1.68e-23 97.1
Msa1015090 MtrunA17_Chr4g0058991 46.939 98 49 2 14 110 207 302 3.94e-23 95.9
Msa1015090 MtrunA17_Chr6g0480581 42.574 101 57 1 16 116 4 103 3.36e-22 90.5
Msa1015090 MtrunA17_Chr6g0453751 48.352 91 38 2 14 95 20 110 4.87e-22 87.4
Msa1015090 MtrunA17_Chr5g0437321 42.857 105 59 1 10 114 13 116 6.68e-22 90.5
Msa1015090 MtrunA17_Chr7g0228531 39.344 122 72 2 10 131 214 333 7.08e-22 92.4
Msa1015090 MtrunA17_Chr5g0417621 37.190 121 75 1 4 124 122 241 3.16e-21 90.5
Msa1015090 MtrunA17_Chr7g0229101 55.714 70 31 0 46 115 4 73 7.54e-21 86.3
Msa1015090 MtrunA17_Chr7g0254261 30.978 184 109 5 16 187 89 266 9.04e-21 88.6
Msa1015090 MtrunA17_Chr7g0238651 36.842 133 79 3 19 149 10 139 9.30e-21 88.6
Msa1015090 MtrunA17_Chr5g0416341 38.095 126 73 2 19 144 29 149 2.11e-20 88.2
Msa1015090 MtrunA17_Chr3g0093811 50.667 75 37 0 46 120 14 88 3.07e-20 85.9
Msa1015090 MtrunA17_Chr4g0042501 30.303 165 108 3 4 167 93 251 3.69e-20 87.4
Msa1015090 MtrunA17_Chr8g0362231 43.564 101 56 1 19 119 25 124 5.01e-20 87.0
Msa1015090 MtrunA17_Chr5g0397841 43.878 98 54 1 13 110 107 203 6.32e-20 87.0
Msa1015090 MtrunA17_Chr5g0397841 33.333 117 75 2 15 128 54 170 7.48e-12 63.5
Msa1015090 MtrunA17_Chr6g0460671 31.138 167 108 3 16 182 99 258 7.11e-20 85.9
Msa1015090 MtrunA17_Chr7g0229131 42.553 94 52 1 46 137 4 97 9.22e-20 82.4
Msa1015090 MtrunA17_Chr5g0434901 55.882 68 30 0 48 115 7 74 1.24e-19 80.5
Msa1015090 MtrunA17_Chr7g0228401 44.318 88 48 1 25 112 288 374 1.20e-18 83.6
Msa1015090 MtrunA17_Chr1g0177901 45.349 86 46 1 25 110 3 87 1.33e-18 80.5
Msa1015090 MtrunA17_Chr3g0125801 36.800 125 77 2 1 124 1 124 1.98e-18 81.3
Msa1015090 MtrunA17_Chr7g0233061 38.710 124 65 4 16 134 180 297 9.53e-18 80.1
Msa1015090 MtrunA17_Chr7g0228481 40.594 101 58 2 10 110 214 312 1.89e-17 79.7
Msa1015090 MtrunA17_Chr1g0193901 45.055 91 48 2 7 95 4 94 1.70e-15 69.7
Msa1015090 MtrunA17_Chr1g0193891 45.055 91 48 2 7 95 4 94 1.70e-15 69.7
Msa1015090 MtrunA17_Chr1g0193871 45.055 91 48 2 7 95 4 94 1.70e-15 69.7
Msa1015090 MtrunA17_Chr1g0193881 45.055 91 48 2 7 95 4 94 1.70e-15 69.7
Msa1015090 MtrunA17_Chr6g0483051 31.579 114 76 2 9 122 62 173 6.87e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1015090 AT3G27810.1 60.465 215 62 5 11 207 17 226 2.47e-82 244
Msa1015090 AT5G40350.1 59.259 216 77 5 1 207 1 214 2.18e-79 236
Msa1015090 AT3G01530.1 59.091 198 65 4 10 207 21 202 1.74e-74 224
Msa1015090 AT1G68320.1 75.455 110 27 0 11 120 16 125 2.35e-61 193
Msa1015090 AT1G25340.1 70.588 119 34 1 3 120 6 124 3.14e-61 192
Msa1015090 AT1G48000.1 74.766 107 27 0 13 119 31 137 7.57e-60 187
Msa1015090 AT2G47190.1 73.874 111 29 0 10 120 16 126 2.10e-59 187
Msa1015090 AT5G49620.1 76.423 123 29 0 10 132 22 144 8.00e-58 184
Msa1015090 AT3G27810.2 54.749 179 58 5 47 207 4 177 4.94e-56 176
Msa1015090 AT1G25340.2 67.227 119 33 2 3 120 6 119 1.18e-55 178
Msa1015090 AT1G25340.3 67.227 119 33 2 3 120 6 119 2.24e-55 178
Msa1015090 AT3G06490.1 79.630 108 22 0 13 120 18 125 5.16e-55 178
Msa1015090 AT5G49620.2 73.600 125 19 1 10 120 22 146 4.23e-54 176
Msa1015090 AT3G24310.1 66.957 115 38 0 15 129 19 133 2.68e-53 172
Msa1015090 AT4G13480.1 70.642 109 32 0 15 123 7 115 1.20e-52 170
Msa1015090 AT5G40350.2 53.892 167 69 4 47 207 5 169 1.20e-51 164
Msa1015090 AT3G30210.1 64.486 107 38 0 15 121 28 134 5.60e-50 164
Msa1015090 AT5G59780.3 58.772 114 47 0 13 126 7 120 7.16e-48 157
Msa1015090 AT3G46130.1 59.292 113 46 0 10 122 5 117 1.19e-47 157
Msa1015090 AT1G16490.1 45.977 174 85 2 14 183 14 182 7.65e-47 155
Msa1015090 AT5G14750.1 50.318 157 73 3 3 155 2 157 1.65e-46 152
Msa1015090 AT1G22640.1 42.640 197 93 4 16 206 14 196 5.98e-46 152
Msa1015090 AT3G02940.2 65.421 107 37 0 14 120 12 118 8.14e-46 154
Msa1015090 AT3G02940.1 65.421 107 37 0 14 120 12 118 1.33e-45 154
Msa1015090 AT3G02940.3 65.421 107 37 0 14 120 12 118 1.33e-45 154
Msa1015090 AT3G13890.2 57.627 118 48 1 1 118 1 116 1.92e-45 154
Msa1015090 AT2G47460.1 64.762 105 37 0 14 118 12 116 3.60e-45 154
Msa1015090 AT1G09540.1 59.167 120 47 1 1 120 1 118 3.96e-45 154
Msa1015090 AT1G63910.1 54.962 131 57 1 1 131 1 129 1.21e-44 152
Msa1015090 AT4G09460.1 66.019 103 35 0 16 118 14 116 1.34e-44 149
Msa1015090 AT2G31180.1 51.333 150 68 2 14 158 12 161 1.70e-44 149
Msa1015090 AT4G34990.1 46.707 167 79 1 16 172 14 180 2.54e-44 149
Msa1015090 AT1G35515.1 65.049 103 36 0 16 118 14 116 3.13e-44 147
Msa1015090 AT1G06180.1 59.130 115 47 0 14 128 12 126 3.67e-44 148
Msa1015090 AT1G57560.1 59.322 118 46 1 1 118 1 116 5.16e-44 149
Msa1015090 AT5G40330.1 51.200 125 61 0 10 134 8 132 5.28e-44 146
Msa1015090 AT1G57560.2 59.322 118 46 1 1 118 1 116 5.31e-44 148
Msa1015090 AT5G16770.4 62.617 107 40 0 14 120 12 118 5.47e-44 149
Msa1015090 AT5G16770.3 62.617 107 40 0 14 120 12 118 5.47e-44 149
Msa1015090 AT4G38620.1 66.019 103 35 0 16 118 14 116 7.46e-44 148
Msa1015090 AT3G01140.2 53.191 141 58 1 14 154 12 144 8.46e-44 149
Msa1015090 AT5G16770.1 62.617 107 40 0 14 120 12 118 9.01e-44 149
Msa1015090 AT5G16770.2 62.617 107 40 0 14 120 12 118 9.01e-44 149
Msa1015090 AT5G54230.1 63.810 105 38 0 14 118 12 116 1.14e-43 149
Msa1015090 AT5G26660.1 56.667 120 50 1 1 120 1 118 1.55e-43 149
Msa1015090 AT5G65230.1 59.292 113 46 0 8 120 6 118 1.66e-43 148
Msa1015090 AT4G28110.1 61.111 108 42 0 14 121 12 119 2.12e-43 147
Msa1015090 AT4G12350.1 51.007 149 69 1 14 162 12 156 2.15e-43 147
Msa1015090 AT3G11440.2 60.194 103 41 0 14 116 41 143 2.58e-43 151
Msa1015090 AT3G01140.1 53.191 141 58 1 14 154 55 187 2.64e-43 149
Msa1015090 AT2G16720.1 64.078 103 37 0 16 118 14 116 3.02e-43 146
Msa1015090 AT2G32460.2 53.659 123 54 1 14 133 6 128 3.50e-43 151
Msa1015090 AT2G32460.1 53.659 123 54 1 14 133 18 140 3.72e-43 151
Msa1015090 AT3G62610.1 61.905 105 40 0 14 118 12 116 3.92e-43 148
Msa1015090 AT5G07690.1 57.759 116 47 1 1 116 1 114 4.02e-43 147
Msa1015090 AT5G61420.2 55.000 120 52 1 1 120 1 118 4.04e-43 148
Msa1015090 AT3G23250.1 60.377 106 42 0 14 119 12 117 4.84e-43 146
Msa1015090 AT4G17785.2 59.167 120 48 1 1 120 1 119 5.42e-43 147
Msa1015090 AT5G06100.1 61.165 103 40 0 14 116 32 134 5.73e-43 150
Msa1015090 AT3G13540.1 61.905 105 40 0 14 118 23 127 5.83e-43 145
Msa1015090 AT5G60890.1 59.459 111 45 0 10 120 8 118 6.34e-43 146
Msa1015090 AT4G17785.1 59.167 120 48 1 1 120 1 119 6.53e-43 147
Msa1015090 AT5G10280.1 56.250 112 49 0 9 120 7 118 6.62e-43 147
Msa1015090 AT4G21440.1 60.952 105 41 0 14 118 12 116 7.47e-43 147
Msa1015090 AT3G27920.1 52.033 123 59 0 10 132 10 132 8.34e-43 144
Msa1015090 AT4G05100.1 57.627 118 49 1 1 118 1 117 8.79e-43 146
Msa1015090 AT4G22680.1 50.000 148 71 2 14 160 12 157 9.73e-43 145
Msa1015090 AT5G07700.1 60.000 105 42 0 14 118 12 116 1.07e-42 146
Msa1015090 AT5G07700.2 60.000 105 42 0 14 118 12 116 1.07e-42 146
Msa1015090 AT3G11440.3 60.194 103 41 0 14 116 41 143 1.91e-42 150
Msa1015090 AT3G11440.4 60.194 103 41 0 14 116 41 143 1.91e-42 150
Msa1015090 AT3G11440.1 60.194 103 41 0 14 116 41 143 1.91e-42 150
Msa1015090 AT1G79180.1 59.259 108 44 0 14 121 14 121 2.19e-42 144
Msa1015090 AT3G13890.1 53.543 127 48 2 1 118 1 125 2.28e-42 146
Msa1015090 AT5G06100.5 61.165 103 40 0 14 116 32 134 2.45e-42 149
Msa1015090 AT5G06100.2 61.165 103 40 0 14 116 32 134 2.45e-42 149
Msa1015090 AT5G06100.3 61.165 103 40 0 14 116 32 134 2.45e-42 149
Msa1015090 AT5G06100.4 61.165 103 40 0 14 116 32 134 2.45e-42 149
Msa1015090 AT5G15310.4 61.905 105 40 0 14 118 12 116 3.22e-42 143
Msa1015090 AT5G15310.1 61.905 105 40 0 14 118 12 116 4.42e-42 144
Msa1015090 AT4G26930.1 56.481 108 47 0 14 121 19 126 4.45e-42 146
Msa1015090 AT5G49330.1 61.905 105 40 0 14 118 12 116 5.16e-42 145
Msa1015090 AT5G12870.1 54.783 115 52 0 6 120 10 124 5.56e-42 143
Msa1015090 AT5G16600.1 59.813 107 43 0 14 120 12 118 6.03e-42 144
Msa1015090 AT5G15310.2 61.905 105 40 0 14 118 12 116 6.24e-42 144
Msa1015090 AT5G35550.1 53.600 125 58 0 1 125 1 125 6.80e-42 142
Msa1015090 AT1G66230.1 57.944 107 45 0 14 120 12 118 7.56e-42 143
Msa1015090 AT1G18570.1 61.905 105 40 0 14 118 13 117 8.10e-42 144
Msa1015090 AT4G01680.3 55.462 119 51 1 1 119 1 117 3.08e-41 140
Msa1015090 AT5G14340.1 58.879 107 44 0 14 120 24 130 3.69e-41 141
Msa1015090 AT3G61250.1 59.048 105 43 0 14 118 12 116 4.27e-41 141
Msa1015090 AT3G53200.1 57.018 114 48 1 10 123 5 117 4.43e-41 139
Msa1015090 AT5G52600.1 59.223 103 42 0 14 116 12 114 4.46e-41 138
Msa1015090 AT5G55020.1 55.556 108 48 0 14 121 26 133 5.13e-41 145
Msa1015090 AT3G47600.1 55.263 114 50 1 14 126 12 125 6.75e-41 142
Msa1015090 AT3G08500.1 56.481 108 47 0 12 119 28 135 7.87e-41 142
Msa1015090 AT4G01680.1 55.462 119 51 1 1 119 1 117 8.46e-41 141
Msa1015090 AT1G56160.1 60.000 105 42 0 14 118 14 118 8.68e-41 140
Msa1015090 AT1G34670.1 58.879 107 44 0 14 120 12 118 8.69e-41 142
Msa1015090 AT1G08810.1 55.046 109 49 0 14 122 12 120 1.43e-40 139
Msa1015090 AT5G62470.2 57.009 107 46 0 14 120 12 118 2.07e-40 141
Msa1015090 AT3G12720.1 57.143 105 45 0 14 118 22 126 2.70e-40 139
Msa1015090 AT1G74650.1 57.547 106 45 0 13 118 11 116 9.14e-40 139
Msa1015090 AT1G74430.1 57.944 107 45 0 14 120 12 118 1.02e-39 137
Msa1015090 AT3G28910.1 53.043 115 54 0 14 128 12 126 2.90e-39 137
Msa1015090 AT1G74080.1 60.194 103 41 0 14 116 12 114 3.31e-39 137
Msa1015090 AT2G26960.1 56.436 101 44 0 16 116 22 122 5.05e-39 139
Msa1015090 AT5G62470.1 57.009 107 45 1 14 120 12 117 2.08e-38 135
Msa1015090 AT5G62320.1 56.250 112 42 1 14 118 13 124 2.20e-38 133
Msa1015090 AT4G37780.1 57.547 106 44 1 14 118 12 117 6.01e-38 133
Msa1015090 AT3G12820.1 55.752 113 47 1 6 118 9 118 1.47e-37 130
Msa1015090 AT4G01680.2 50.382 131 51 2 1 119 1 129 2.40e-37 133
Msa1015090 AT3G49690.1 52.991 117 54 1 13 128 11 127 2.32e-36 129
Msa1015090 AT5G23000.1 55.660 106 46 1 14 118 12 117 4.45e-36 129
Msa1015090 AT5G56110.1 53.774 106 49 0 13 118 11 116 6.84e-36 128
Msa1015090 AT1G18710.1 55.140 107 48 0 14 120 12 118 7.39e-36 127
Msa1015090 AT5G65790.1 52.137 117 55 1 13 128 11 127 7.39e-36 129
Msa1015090 AT1G79180.2 45.390 141 44 1 14 121 14 154 1.02e-35 128
Msa1015090 AT3G28470.1 56.000 100 44 0 13 112 11 110 1.45e-35 127
Msa1015090 AT5G57620.1 54.206 107 48 1 13 118 11 117 1.54e-35 128
Msa1015090 AT2G36890.1 56.075 107 46 1 13 118 11 117 1.60e-35 127
Msa1015090 AT4G25560.1 50.450 111 55 0 15 125 11 121 2.65e-35 126
Msa1015090 AT2G36890.2 56.075 107 46 1 13 118 52 158 2.76e-35 127
Msa1015090 AT3G48920.1 47.414 116 59 1 15 128 19 134 4.53e-35 125
Msa1015090 AT3G46130.3 66.667 78 26 0 45 122 8 85 5.22e-35 124
Msa1015090 AT5G52260.1 54.902 102 46 0 15 116 13 114 9.20e-35 124
Msa1015090 AT5G59780.2 68.421 76 24 0 47 122 20 95 9.96e-35 122
Msa1015090 AT3G46130.4 68.421 76 24 0 47 122 20 95 1.84e-34 122
Msa1015090 AT1G66370.1 51.351 111 52 1 14 124 8 116 2.37e-33 120
Msa1015090 AT3G60460.1 46.667 105 55 1 13 116 10 114 5.46e-33 120
Msa1015090 AT3G53200.2 64.935 77 26 1 47 123 9 84 5.52e-31 112
Msa1015090 AT1G66380.1 50.000 114 55 1 14 127 8 119 5.09e-30 108
Msa1015090 AT1G56650.1 49.167 120 59 1 14 133 8 125 6.54e-30 111
Msa1015090 AT5G26660.2 63.514 74 27 0 47 120 14 87 1.60e-29 112
Msa1015090 AT5G14750.3 47.500 120 56 3 42 155 5 123 8.59e-29 106
Msa1015090 AT2G26950.1 45.918 98 53 0 16 113 18 115 1.01e-28 110
Msa1015090 AT1G66390.1 53.398 103 48 0 14 116 8 110 1.45e-28 107
Msa1015090 AT5G35550.2 59.524 84 34 0 42 125 45 128 2.22e-28 107
Msa1015090 AT3G12820.2 63.768 69 25 0 50 118 2 70 1.12e-26 101
Msa1015090 AT3G47600.2 55.556 81 35 1 47 126 39 119 3.75e-26 103
Msa1015090 AT3G27785.1 40.496 121 70 2 3 122 176 295 3.94e-26 104
Msa1015090 AT5G11510.2 42.593 108 61 1 11 118 76 182 8.14e-26 104
Msa1015090 AT5G11510.2 32.456 114 75 2 16 128 29 141 3.50e-11 62.4
Msa1015090 AT5G11510.3 42.593 108 61 1 11 118 76 182 8.44e-26 104
Msa1015090 AT5G11510.3 32.456 114 75 2 16 128 29 141 3.90e-11 62.0
Msa1015090 AT5G11510.1 42.593 108 61 1 11 118 76 182 8.44e-26 104
Msa1015090 AT5G11510.1 32.456 114 75 2 16 128 29 141 3.90e-11 62.0
Msa1015090 AT5G11510.4 42.593 108 61 1 11 118 76 182 8.44e-26 104
Msa1015090 AT5G11510.4 32.456 114 75 2 16 128 29 141 3.90e-11 62.0
Msa1015090 AT5G11510.5 42.593 108 61 1 11 118 76 182 8.64e-26 104
Msa1015090 AT5G11510.5 32.456 114 75 2 16 128 29 141 3.65e-11 62.4
Msa1015090 AT2G23290.1 39.416 137 82 1 7 143 4 139 1.18e-25 101
Msa1015090 AT5G02320.1 43.119 109 61 1 11 119 122 229 2.93e-25 102
Msa1015090 AT5G02320.2 43.119 109 61 1 11 119 122 229 2.93e-25 102
Msa1015090 AT3G09370.2 44.340 106 58 1 11 116 130 234 3.18e-25 102
Msa1015090 AT3G09370.2 36.792 106 65 2 16 120 83 187 9.22e-11 60.8
Msa1015090 AT3G09370.1 44.340 106 58 1 11 116 125 229 3.58e-25 102
Msa1015090 AT3G09370.3 44.340 106 58 1 11 116 138 242 3.81e-25 102
Msa1015090 AT3G09370.3 36.792 106 65 2 16 120 91 195 9.63e-11 60.8
Msa1015090 AT5G02320.3 43.119 109 61 1 11 119 62 169 4.62e-25 102
Msa1015090 AT3G09230.1 36.184 152 95 2 13 164 52 201 1.15e-24 100
Msa1015090 AT4G18770.1 41.964 112 63 2 16 127 217 326 1.84e-24 99.8
Msa1015090 AT5G11050.1 37.600 125 77 1 13 137 102 225 7.26e-24 98.2
Msa1015090 AT3G50060.1 36.478 159 94 4 13 170 3 155 7.88e-24 96.3
Msa1015090 AT5G58850.1 46.316 95 50 1 16 110 105 198 8.70e-24 98.2
Msa1015090 AT4G37260.1 39.844 128 70 2 16 143 13 133 9.93e-24 96.7
Msa1015090 AT4G32730.5 38.889 108 65 1 11 118 82 188 1.18e-23 98.6
Msa1015090 AT4G32730.5 33.019 106 69 2 16 120 35 139 5.89e-11 61.6
Msa1015090 AT4G32730.4 38.889 108 65 1 11 118 82 188 1.18e-23 98.6
Msa1015090 AT4G32730.4 33.019 106 69 2 16 120 35 139 5.89e-11 61.6
Msa1015090 AT4G32730.3 38.889 108 65 1 11 118 82 188 1.18e-23 98.6
Msa1015090 AT4G32730.3 33.019 106 69 2 16 120 35 139 5.89e-11 61.6
Msa1015090 AT4G32730.2 38.889 108 65 1 11 118 82 188 1.18e-23 98.6
Msa1015090 AT4G32730.2 33.019 106 69 2 16 120 35 139 5.89e-11 61.6
Msa1015090 AT4G32730.1 38.889 108 65 1 11 118 82 188 1.23e-23 98.6
Msa1015090 AT4G32730.1 32.456 114 75 2 16 128 35 147 5.32e-11 61.6
Msa1015090 AT1G69560.1 29.612 206 130 5 4 207 95 287 2.99e-23 95.5
Msa1015090 AT1G69560.2 29.612 206 130 5 4 207 111 303 3.30e-23 95.5
Msa1015090 AT3G55730.1 45.545 101 54 1 16 116 56 155 4.86e-23 95.5
Msa1015090 AT5G40360.1 43.299 97 54 1 14 110 156 251 4.20e-22 92.8
Msa1015090 AT3G29020.1 36.800 125 77 2 16 139 65 188 1.11e-21 89.4
Msa1015090 AT5G67300.1 43.269 104 58 1 13 116 3 105 1.53e-21 90.5
Msa1015090 AT2G39880.1 44.554 101 55 1 16 116 50 149 1.64e-21 91.3
Msa1015090 AT3G29020.2 36.800 125 77 2 16 139 67 190 1.67e-21 90.1
Msa1015090 AT1G22640.3 35.948 153 78 4 60 206 1 139 1.91e-21 87.8
Msa1015090 AT5G14750.4 46.392 97 50 2 60 155 1 96 9.07e-21 84.7
Msa1015090 AT5G14750.2 46.392 97 50 2 60 155 1 96 9.07e-21 84.7
Msa1015090 AT1G17950.1 35.036 137 79 2 16 152 5 131 1.27e-20 87.0
Msa1015090 AT5G17800.1 36.607 112 70 1 16 127 93 203 2.20e-20 87.4
Msa1015090 AT1G14350.2 43.564 101 56 1 19 119 28 127 2.95e-20 88.2
Msa1015090 AT1G14350.1 43.564 101 56 1 19 119 28 127 2.95e-20 88.2
Msa1015090 AT4G00540.2 38.938 113 65 2 11 120 98 209 3.68e-20 87.8
Msa1015090 AT2G25230.1 30.244 205 125 5 13 202 23 224 3.95e-20 85.1
Msa1015090 AT3G23250.2 60.000 60 24 0 60 119 1 60 4.26e-20 85.1
Msa1015090 AT4G00540.1 38.938 113 65 2 11 120 96 207 6.94e-20 87.0
Msa1015090 AT1G26780.1 38.095 105 64 1 16 120 98 201 7.01e-20 85.5
Msa1015090 AT1G26780.2 38.095 105 64 1 16 120 98 201 7.21e-20 86.7
Msa1015090 AT1G66380.3 47.312 93 47 1 41 133 2 92 1.01e-19 80.9
Msa1015090 AT5G59780.1 69.388 49 15 0 72 120 1 49 1.19e-19 82.4
Msa1015090 AT3G46130.2 69.388 49 15 0 72 120 1 49 2.15e-19 82.4
Msa1015090 AT1G73410.1 42.056 107 59 2 16 121 6 110 3.84e-19 82.8
Msa1015090 AT2G37630.1 38.462 104 62 1 19 120 7 110 5.07e-19 84.3
Msa1015090 AT5G39700.1 36.220 127 73 2 15 141 55 173 7.80e-19 80.9
Msa1015090 AT1G73410.2 42.056 107 59 2 16 121 6 110 8.17e-19 81.3
Msa1015090 AT4G33450.1 36.752 117 71 2 10 126 13 126 9.07e-19 82.0
Msa1015090 AT1G18960.1 35.897 117 67 3 4 120 3 111 1.48e-18 82.4
Msa1015090 AT2G02820.3 32.544 169 106 3 19 187 33 193 1.87e-18 82.4
Msa1015090 AT2G02820.2 38.095 126 75 2 19 144 33 155 4.88e-18 82.0
Msa1015090 AT2G02820.1 32.544 169 106 3 19 187 33 193 6.32e-18 81.6
Msa1015090 AT1G66380.2 50.000 78 39 0 14 91 8 85 7.94e-18 75.9
Msa1015090 AT1G71030.2 53.125 64 30 0 53 116 5 68 1.38e-17 77.4
Msa1015090 AT1G71030.1 46.154 78 41 1 41 118 8 84 1.68e-17 77.4
Msa1015090 AT5G40430.1 38.596 114 65 3 2 112 37 148 7.62e-17 77.0
Msa1015090 AT1G14350.3 46.774 62 33 0 58 119 23 84 8.87e-13 66.6
Msa1015090 AT1G14350.4 46.774 62 33 0 58 119 23 84 8.87e-13 66.6
Msa1015090 AT3G18100.1 38.462 104 62 2 14 117 544 645 1.17e-12 66.6
Msa1015090 AT3G18100.3 38.462 104 62 2 14 117 496 597 1.38e-12 66.2
Msa1015090 AT3G18100.4 38.776 98 59 1 14 111 383 479 1.40e-12 66.2
Msa1015090 AT3G18100.2 38.462 104 62 2 14 117 331 432 1.63e-12 66.2
Msa1015090 AT4G25560.2 57.778 45 19 0 72 116 2 46 1.90e-12 64.3
Msa1015090 AT1G16490.2 49.231 65 31 1 78 142 11 73 2.32e-12 63.9

Find 53 sgRNAs with CRISPR-Local

Find 315 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCTCTTACCAAGGAATTT+TGG 0.171003 7_1:+26277437 Msa1015090:CDS
GTTCAGCAATGTTGGAAATT+TGG 0.179145 7_1:-26277389 None:intergenic
CAGCTTGCTTGATATGCTTT+TGG 0.184260 7_1:-26277287 None:intergenic
CCGAAGCCTGCAACTCTTTC+CGG 0.204393 7_1:-26272584 None:intergenic
GTAGTTCTTTATCTCATTAT+CGG 0.309254 7_1:-26277250 None:intergenic
TTGTCACTGCAACTACTAAA+TGG 0.327480 7_1:+26277540 Msa1015090:CDS
CCAAACACCTTCACCATGAT+TGG 0.346620 7_1:-26272293 None:intergenic
CCAATCATGGTGAAGGTGTT+TGG 0.360993 7_1:+26272293 Msa1015090:CDS
ATCTCATTATCGGTTCTTCC+CGG 0.368690 7_1:-26277240 None:intergenic
AACGTACCGGAAAGAGTTGC+AGG 0.368952 7_1:+26272578 Msa1015090:CDS
GAAAATCGCAAAACATTTAC+CGG 0.382424 7_1:+26277221 Msa1015090:CDS
TTCCAACATTGCTGAACCTA+TGG 0.392818 7_1:+26277395 Msa1015090:CDS
AGAGGGTGGTGAGATAATAT+TGG 0.413544 7_1:-26277421 None:intergenic
AATCAAGTTGTTCTAACTAC+TGG 0.421398 7_1:+26277502 Msa1015090:CDS
TTCATGCTAAGTGGGGAAAC+AGG 0.422675 7_1:+26272680 Msa1015090:CDS
CTTGATTGATCAGAAATTGT+AGG 0.428393 7_1:-26277486 None:intergenic
TTCCAAAATTCCTTGGTAAG+AGG 0.451401 7_1:-26277439 None:intergenic
ATCAACTATATTGCCAATCA+TGG 0.459614 7_1:+26272280 Msa1015090:CDS
GAAATGGTTCCAAAATTCCT+TGG 0.461055 7_1:-26277446 None:intergenic
CCGGAAAGAGTTGCAGGCTT+CGG 0.464657 7_1:+26272584 Msa1015090:CDS
TCCAAAATTCCTTGGTAAGA+GGG 0.465311 7_1:-26277438 None:intergenic
CATGGTCCCTTTCGTACATC+AGG 0.468269 7_1:-26272232 None:intergenic
ATAATGAGATAAAGAACTAC+TGG 0.481229 7_1:+26277253 Msa1015090:CDS
CATTGAACTTCATGCTAAGT+GGG 0.494832 7_1:+26272672 Msa1015090:CDS
GTCCATAGGTTCAGCAATGT+TGG 0.497472 7_1:-26277397 None:intergenic
TTGATTGATCAGAAATTGTA+GGG 0.501673 7_1:-26277485 None:intergenic
ATATTCCCTCGTCTAACATC+AGG 0.503266 7_1:-26272625 None:intergenic
AACTCCTTGGCTAAATCTGC+TGG 0.506754 7_1:+26272316 Msa1015090:CDS
ATGATCAAGAGTTGTTCCTC+AGG 0.507271 7_1:-26272652 None:intergenic
AAGTCTTCTTCCATTGTCCA+TGG 0.510332 7_1:-26272250 None:intergenic
AACTGATGATGAGTTGGAAA+TGG 0.536466 7_1:-26277462 None:intergenic
TCATTGAACTTCATGCTAAG+TGG 0.536877 7_1:+26272671 Msa1015090:CDS
TGAAGGTGTTTGGAACTCCT+TGG 0.569511 7_1:+26272303 Msa1015090:CDS
CAAGATCCTGATGTACGAAA+GGG 0.574930 7_1:+26272226 Msa1015090:CDS
GAAAGAGTTGCAGGCTTCGG+TGG 0.580113 7_1:+26272587 Msa1015090:CDS
GTAGGGAACTGATGATGAGT+TGG 0.580240 7_1:-26277468 None:intergenic
ATCTCACCACCCTCTTACCA+AGG 0.583108 7_1:+26277429 Msa1015090:CDS
TATATTGCCAATCATGGTGA+AGG 0.589500 7_1:+26272286 Msa1015090:CDS
TTGTTCTAACTACTGGAGCA+TGG 0.590689 7_1:+26277509 Msa1015090:CDS
ACAAGATCCTGATGTACGAA+AGG 0.594892 7_1:+26272225 Msa1015090:CDS
GAGATAATATTGGTGTCCAT+AGG 0.606109 7_1:-26277411 None:intergenic
TAAAGAACTACTGGAGGACA+AGG 0.615004 7_1:+26277262 Msa1015090:CDS
AACTGTCAATCTCAAGAACA+AGG 0.621029 7_1:+26277312 Msa1015090:CDS
CTTCGACCTGATGTTAGACG+AGG 0.623587 7_1:+26272619 Msa1015090:CDS
CTGATGTACGAAAGGGACCA+TGG 0.624475 7_1:+26272233 Msa1015090:CDS
ATTACCAGCAGATTTAGCCA+AGG 0.626193 7_1:-26272320 None:intergenic
AAAATTCCTTGGTAAGAGGG+TGG 0.641242 7_1:-26277435 None:intergenic
ACGAAAGGGACCATGGACAA+TGG 0.642783 7_1:+26272240 Msa1015090:CDS
ATGAGATAAAGAACTACTGG+AGG 0.648874 7_1:+26277256 Msa1015090:CDS
TTCGACCTGATGTTAGACGA+GGG 0.661220 7_1:+26272620 Msa1015090:CDS
ATTGAACTTCATGCTAAGTG+GGG 0.662589 7_1:+26272673 Msa1015090:CDS
AAAATCGCAAAACATTTACC+GGG 0.667425 7_1:+26277222 Msa1015090:CDS
ACGAGGGAATATTACACCTG+AGG 0.692927 7_1:+26272636 Msa1015090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATATATGTTTTTTTACT+AGG - chr7_1:26273501-26273520 None:intergenic 10.0%
!! AGTAAAAAAACATATATATT+TGG + chr7_1:26273501-26273520 Msa1015090:intron 10.0%
!!! TTATCTTTATTTTTACTTTT+TGG + chr7_1:26274576-26274595 Msa1015090:intron 10.0%
!! ACATTCAAAATATATAAAAA+AGG + chr7_1:26274645-26274664 Msa1015090:intron 10.0%
!! AAAAAAGGATAAAAAAAAAA+AGG + chr7_1:26274660-26274679 Msa1015090:intron 10.0%
!! TATAAGTATAAGAAAATATT+GGG - chr7_1:26274788-26274807 None:intergenic 10.0%
!! ATATAAGTATAAGAAAATAT+TGG - chr7_1:26274789-26274808 None:intergenic 10.0%
!!! ATATTCTCTTTTTTTTTTTT+TGG - chr7_1:26275714-26275733 None:intergenic 10.0%
!!! ATATTATTTTATTTGTCATT+CGG - chr7_1:26276074-26276093 None:intergenic 10.0%
!! CATAAATCATCATAATAATA+TGG + chr7_1:26272534-26272553 Msa1015090:intron 15.0%
!!! ACTTTTTTTTTTTTTTTGAG+GGG - chr7_1:26272779-26272798 None:intergenic 15.0%
!!! CACTTTTTTTTTTTTTTTGA+GGG - chr7_1:26272780-26272799 None:intergenic 15.0%
!!! TTTGCTTTATTTTTAACTTT+TGG + chr7_1:26272899-26272918 Msa1015090:intron 15.0%
!!! TTGTTTTGTTGTTAAATAAA+AGG - chr7_1:26273198-26273217 None:intergenic 15.0%
!! GAATATTATAAGATTAGTAA+TGG + chr7_1:26273248-26273267 Msa1015090:intron 15.0%
!!! CATTTTATCGTATAAATTTT+TGG + chr7_1:26273282-26273301 Msa1015090:intron 15.0%
!! AAAAAAACATATATATTTGG+TGG + chr7_1:26273504-26273523 Msa1015090:intron 15.0%
!! TGTAAATAAAGAGAAAAATT+AGG + chr7_1:26274143-26274162 Msa1015090:intron 15.0%
!! GTAAATAAAGAGAAAAATTA+GGG + chr7_1:26274144-26274163 Msa1015090:intron 15.0%
!!! TGATATTTTTCAAAATAAAG+TGG - chr7_1:26274186-26274205 None:intergenic 15.0%
!!! TATATTTTGAATGTACTTTT+AGG - chr7_1:26274639-26274658 None:intergenic 15.0%
!!! GTTTTCTGTTTATTTAATTA+CGG - chr7_1:26275549-26275568 None:intergenic 15.0%
!! GTAATTAAATAAACAGAAAA+CGG + chr7_1:26275548-26275567 Msa1015090:intron 15.0%
!!! ATTTTTAAAACTTTGGAATA+AGG - chr7_1:26276001-26276020 None:intergenic 15.0%
!!! TATTCCAAAGTTTTAAAAAT+TGG + chr7_1:26276001-26276020 Msa1015090:intron 15.0%
!!! AGCTGATAAAAAATAATTTT+TGG + chr7_1:26276163-26276182 Msa1015090:intron 15.0%
!!! AATATGGTTTCAAACATTTT+AGG + chr7_1:26272550-26272569 Msa1015090:intron 20.0%
!!! GCACTTTTTTTTTTTTTTTG+AGG - chr7_1:26272781-26272800 None:intergenic 20.0%
!!! GGTTTGTATTATTTTTACAA+GGG + chr7_1:26273008-26273027 Msa1015090:intron 20.0%
!!! GTTTGTATTATTTTTACAAG+GGG + chr7_1:26273009-26273028 Msa1015090:intron 20.0%
!! TTATAGATAGATTTAGTACA+TGG - chr7_1:26273080-26273099 None:intergenic 20.0%
!! AATATATAACTAGAAAGTAG+AGG - chr7_1:26273223-26273242 None:intergenic 20.0%
!!! TTCAATTGTTTTTTGAGATA+AGG - chr7_1:26273533-26273552 None:intergenic 20.0%
!!! TGTGTAGATTCATATTTTAT+TGG - chr7_1:26273618-26273637 None:intergenic 20.0%
!! ATAAAATATGAATCTACACA+AGG + chr7_1:26273618-26273637 Msa1015090:intron 20.0%
!! TATAGAAAAAGTAAAGAAGA+AGG + chr7_1:26273681-26273700 Msa1015090:intron 20.0%
!!! TATACAAATCCAACTTTTTT+AGG - chr7_1:26273761-26273780 None:intergenic 20.0%
!!! CTGAAATATTTTCTTAATCA+AGG - chr7_1:26273796-26273815 None:intergenic 20.0%
!!! TTTTCAACAAAAATGAAGTA+TGG - chr7_1:26274542-26274561 None:intergenic 20.0%
!!! AATTTTGAAAATGCTTGATT+TGG - chr7_1:26274732-26274751 None:intergenic 20.0%
!!! ATTCTAAAATAGAGTTGATA+AGG - chr7_1:26275036-26275055 None:intergenic 20.0%
!! GACTGTATTTATTTAAATCA+AGG + chr7_1:26275309-26275328 Msa1015090:intron 20.0%
!! GCGTCAATATATAATAATTA+AGG - chr7_1:26275639-26275658 None:intergenic 20.0%
!! TTGACGCTTAATAAAATAAA+AGG + chr7_1:26275652-26275671 Msa1015090:intron 20.0%
!! TGACGCTTAATAAAATAAAA+GGG + chr7_1:26275653-26275672 Msa1015090:intron 20.0%
!! ATGTATATTTCAACAAAGAT+CGG + chr7_1:26275873-26275892 Msa1015090:intron 20.0%
!!! GCATGTATACTTTTTTTTTT+GGG - chr7_1:26277115-26277134 None:intergenic 20.0%
!!! TGCATGTATACTTTTTTTTT+TGG - chr7_1:26277116-26277135 None:intergenic 20.0%
!!! ATTAATTTGCAAAAGAATGT+TGG - chr7_1:26277180-26277199 None:intergenic 20.0%
!! CTATACACTCATTAGATTTT+AGG - chr7_1:26272462-26272481 None:intergenic 25.0%
! TTGGAATAGTGTTTATAAAG+TGG + chr7_1:26272946-26272965 Msa1015090:intron 25.0%
! TGGAATAGTGTTTATAAAGT+GGG + chr7_1:26272947-26272966 Msa1015090:intron 25.0%
!!! GGGTTTGTATTATTTTTACA+AGG + chr7_1:26273007-26273026 Msa1015090:intron 25.0%
!! TTGTTGTTAAATAAAAGGAG+AGG - chr7_1:26273193-26273212 None:intergenic 25.0%
! ACCGTATATTTCATTCAAAT+CGG + chr7_1:26273319-26273338 Msa1015090:intron 25.0%
!!! ACCGATTTGAATGAAATATA+CGG - chr7_1:26273323-26273342 None:intergenic 25.0%
! AACATTCATAAACTAGATCT+AGG - chr7_1:26273383-26273402 None:intergenic 25.0%
!! TAGATCTAGTTTATGAATGT+TGG + chr7_1:26273382-26273401 Msa1015090:intron 25.0%
! AAATATGTTATTCATAGGGT+GGG - chr7_1:26273476-26273495 None:intergenic 25.0%
! AAAAGAAAGACATGGATTTA+TGG + chr7_1:26273722-26273741 Msa1015090:intron 25.0%
! TGGATTTGTATATGTCATTA+AGG + chr7_1:26273769-26273788 Msa1015090:intron 25.0%
! AAGTATAGAGAAAAATGAAG+AGG + chr7_1:26273992-26274011 Msa1015090:intron 25.0%
!!! AATCGCTTTACTTTTGTATT+TGG + chr7_1:26274035-26274054 Msa1015090:intron 25.0%
!!! ATCGCTTTACTTTTGTATTT+GGG + chr7_1:26274036-26274055 Msa1015090:intron 25.0%
! AAAATAAGTGTTAGCTAGAA+TGG + chr7_1:26274100-26274119 Msa1015090:intron 25.0%
! CAACATAAAAAGACTAGAAA+AGG + chr7_1:26274260-26274279 Msa1015090:intron 25.0%
! AACAGGATATGTTATATGTT+AGG + chr7_1:26274895-26274914 Msa1015090:intron 25.0%
! TTTGTCAAAGTTAAGTTAGT+TGG - chr7_1:26274956-26274975 None:intergenic 25.0%
! TGGTAAATGATATTTGAGAA+AGG - chr7_1:26275235-26275254 None:intergenic 25.0%
!!! TATATTTTTGAACGGCAATA+TGG - chr7_1:26275255-26275274 None:intergenic 25.0%
! GACGCTTAATAAAATAAAAG+GGG + chr7_1:26275654-26275673 Msa1015090:intron 25.0%
! ACGCTTAATAAAATAAAAGG+GGG + chr7_1:26275655-26275674 Msa1015090:intron 25.0%
!!! GAATATTTTTGAACTTGAAG+AGG + chr7_1:26275789-26275808 Msa1015090:intron 25.0%
!!! TTAAAACTTTGGAATAAGGT+TGG - chr7_1:26275997-26276016 None:intergenic 25.0%
!!! AGGTCCAATTTTTAAAACTT+TGG - chr7_1:26276008-26276027 None:intergenic 25.0%
!! ATCAGTTTATTTGGTTCAAT+CGG + chr7_1:26276032-26276051 Msa1015090:intron 25.0%
! ATCAAGCAATTGAGTTTAAA+TGG + chr7_1:26276102-26276121 Msa1015090:intron 25.0%
! CTTAGAAAAAGAAACTATTG+GGG - chr7_1:26276425-26276444 None:intergenic 25.0%
! CCTTAGAAAAAGAAACTATT+GGG - chr7_1:26276426-26276445 None:intergenic 25.0%
! ACCTTAGAAAAAGAAACTAT+TGG - chr7_1:26276427-26276446 None:intergenic 25.0%
! TAAGAGAAAGAAATTGTAGT+AGG - chr7_1:26276564-26276583 None:intergenic 25.0%
! CAATACATACTACAAAAAGT+TGG + chr7_1:26276588-26276607 Msa1015090:intron 25.0%
! AAAGGTAAAAGTTATGAATG+TGG - chr7_1:26276770-26276789 None:intergenic 25.0%
! AGAGCAAGTAAAAAAAGTAA+AGG - chr7_1:26276788-26276807 None:intergenic 25.0%
! GATTTATAGCTTCTTTAGTT+AGG + chr7_1:26276991-26277010 Msa1015090:intron 25.0%
! GATAAGTAAAAACTGATCAA+GGG - chr7_1:26277053-26277072 None:intergenic 25.0%
! AGATAAGTAAAAACTGATCA+AGG - chr7_1:26277054-26277073 None:intergenic 25.0%
! GAATGTTGGAAATATAGAAT+TGG - chr7_1:26277166-26277185 None:intergenic 25.0%
! GTAGTTCTTTATCTCATTAT+CGG - chr7_1:26277253-26277272 None:intergenic 25.0%
! ATAATGAGATAAAGAACTAC+TGG + chr7_1:26277253-26277272 Msa1015090:CDS 25.0%
! TTGATTGATCAGAAATTGTA+GGG - chr7_1:26277488-26277507 None:intergenic 25.0%
ATCAACTATATTGCCAATCA+TGG + chr7_1:26272280-26272299 Msa1015090:CDS 30.0%
TTAAAAAGAATGACCTAGCT+TGG + chr7_1:26272489-26272508 Msa1015090:intron 30.0%
!! ATTTTAGGTCTTAAACGTAC+CGG + chr7_1:26272565-26272584 Msa1015090:intron 30.0%
AATAGTGTTTATAAAGTGGG+AGG + chr7_1:26272950-26272969 Msa1015090:intron 30.0%
ATAGTGTTTATAAAGTGGGA+GGG + chr7_1:26272951-26272970 Msa1015090:intron 30.0%
TGAGAATAGTTGCAATACTT+TGG + chr7_1:26272985-26273004 Msa1015090:intron 30.0%
GAGAATAGTTGCAATACTTT+GGG + chr7_1:26272986-26273005 Msa1015090:intron 30.0%
AGAATAGTTGCAATACTTTG+GGG + chr7_1:26272987-26273006 Msa1015090:intron 30.0%
GTATATTTCATTCAAATCGG+TGG + chr7_1:26273322-26273341 Msa1015090:intron 30.0%
! CATAAACTAGATCTAGGATA+TGG - chr7_1:26273377-26273396 None:intergenic 30.0%
AATATGTTATTCATAGGGTG+GGG - chr7_1:26273475-26273494 None:intergenic 30.0%
CAAATATGTTATTCATAGGG+TGG - chr7_1:26273477-26273496 None:intergenic 30.0%
CACCCTATGAATAACATATT+TGG + chr7_1:26273475-26273494 Msa1015090:intron 30.0%
GGCCAAATATGTTATTCATA+GGG - chr7_1:26273480-26273499 None:intergenic 30.0%
AGGCCAAATATGTTATTCAT+AGG - chr7_1:26273481-26273500 None:intergenic 30.0%
CGATGATAAAAAGAAAGACA+TGG + chr7_1:26273714-26273733 Msa1015090:intron 30.0%
AATGAGAAGCCTAAAAAAGT+TGG + chr7_1:26273749-26273768 Msa1015090:intron 30.0%
! GAATCCATTTTCAATAAGGT+GGG - chr7_1:26273906-26273925 None:intergenic 30.0%
! TGAATCCATTTTCAATAAGG+TGG - chr7_1:26273907-26273926 None:intergenic 30.0%
! GAGTGAATCCATTTTCAATA+AGG - chr7_1:26273910-26273929 None:intergenic 30.0%
!! GCTTCTAAAGCCAAAATATA+CGG + chr7_1:26273940-26273959 Msa1015090:intron 30.0%
!!! TGTTTTTTCTTTGTAGAGGT+AGG - chr7_1:26274076-26274095 None:intergenic 30.0%
!!! GTCTTGTTTTTTCTTTGTAG+AGG - chr7_1:26274080-26274099 None:intergenic 30.0%
AGCTAGAATGGATAAACAAA+AGG + chr7_1:26274112-26274131 Msa1015090:intron 30.0%
GCTAGAATGGATAAACAAAA+GGG + chr7_1:26274113-26274132 Msa1015090:intron 30.0%
GAGAAAAATTAGGGCAAAAA+AGG + chr7_1:26274153-26274172 Msa1015090:intron 30.0%
GATGTAAAAGTCATACTGAA+TGG - chr7_1:26274238-26274257 None:intergenic 30.0%
TGGTTTCTCTCTAAATCTAT+CGG - chr7_1:26274480-26274499 None:intergenic 30.0%
AACAAAAATGAAGTATGGTG+GGG - chr7_1:26274537-26274556 None:intergenic 30.0%
CAACAAAAATGAAGTATGGT+GGG - chr7_1:26274538-26274557 None:intergenic 30.0%
TCAACAAAAATGAAGTATGG+TGG - chr7_1:26274539-26274558 None:intergenic 30.0%
! ACGAGAAACAACTTTGAAAA+GGG - chr7_1:26274612-26274631 None:intergenic 30.0%
AAAAAGGAGTGAAAACTAGA+CGG + chr7_1:26274676-26274695 Msa1015090:intron 30.0%
!!! TCTCTCTCTTTTTAAGTACT+CGG - chr7_1:26274870-26274889 None:intergenic 30.0%
TCAAAGTTAAGTTAGTTGGT+GGG - chr7_1:26274952-26274971 None:intergenic 30.0%
AGTCAATGATAAAGATAGGA+TGG - chr7_1:26274999-26275018 None:intergenic 30.0%
ATGCAGTCAATGATAAAGAT+AGG - chr7_1:26275003-26275022 None:intergenic 30.0%
! TATCTTTATCATTGACTGCA+TGG + chr7_1:26275002-26275021 Msa1015090:intron 30.0%
AATCAGATAATGACAAGTTG+AGG + chr7_1:26275132-26275151 Msa1015090:intron 30.0%
! TTGAGGTACTATATAGGTTT+AGG + chr7_1:26275149-26275168 Msa1015090:intron 30.0%
ATATTTGAGAAAGGTAGTCA+GGG - chr7_1:26275226-26275245 None:intergenic 30.0%
!! TAATGACTTTGCTTTGAAGA+AGG - chr7_1:26275816-26275835 None:intergenic 30.0%
TTGAACCAAATAAACTGATG+TGG - chr7_1:26276031-26276050 None:intergenic 30.0%
AATCCAACAACTGATTGTTA+GGG + chr7_1:26276204-26276223 Msa1015090:intron 30.0%
! TTTTTCTCCTTAAAACTGGA+GGG + chr7_1:26276229-26276248 Msa1015090:intron 30.0%
AATCATTTGAACCAACCTAA+TGG + chr7_1:26276303-26276322 Msa1015090:intron 30.0%
! CCCAATAGTTTCTTTTTCTA+AGG + chr7_1:26276423-26276442 Msa1015090:intron 30.0%
! ACAAAAAGTTGGTTTATCGA+CGG + chr7_1:26276599-26276618 Msa1015090:intron 30.0%
TAAAAGTTATGAATGTGGCT+GGG - chr7_1:26276765-26276784 None:intergenic 30.0%
!!! ATTAACCATCTGGTTTTAAG+CGG - chr7_1:26277091-26277110 None:intergenic 30.0%
!!! TTTTTTGGGTATTAACCATC+TGG - chr7_1:26277101-26277120 None:intergenic 30.0%
!!! GATTTCTAGTTTTAAGTGTC+TGG - chr7_1:26277144-26277163 None:intergenic 30.0%
AATTAATCATTCACCAATGC+AGG + chr7_1:26277193-26277212 Msa1015090:intron 30.0%
GAAAATCGCAAAACATTTAC+CGG + chr7_1:26277221-26277240 Msa1015090:CDS 30.0%
AAAATCGCAAAACATTTACC+GGG + chr7_1:26277222-26277241 Msa1015090:CDS 30.0%
CTTGATTGATCAGAAATTGT+AGG - chr7_1:26277489-26277508 None:intergenic 30.0%
! AATCAAGTTGTTCTAACTAC+TGG + chr7_1:26277502-26277521 Msa1015090:CDS 30.0%
TATATTGCCAATCATGGTGA+AGG + chr7_1:26272286-26272305 Msa1015090:CDS 35.0%
TCATTGAACTTCATGCTAAG+TGG + chr7_1:26272671-26272690 Msa1015090:CDS 35.0%
CATTGAACTTCATGCTAAGT+GGG + chr7_1:26272672-26272691 Msa1015090:CDS 35.0%
ATTGAACTTCATGCTAAGTG+GGG + chr7_1:26272673-26272692 Msa1015090:CDS 35.0%
ATGAGCTTGTAGTATACTCT+TGG + chr7_1:26272927-26272946 Msa1015090:intron 35.0%
AACTGTCTGTGAAAAGTTTC+AGG + chr7_1:26273346-26273365 Msa1015090:intron 35.0%
CTAGTTTATGAATGTTGGTG+AGG + chr7_1:26273387-26273406 Msa1015090:intron 35.0%
ATATGTTATTCATAGGGTGG+GGG - chr7_1:26273474-26273493 None:intergenic 35.0%
TTTCTTCCGTTCGATATGAT+CGG - chr7_1:26273656-26273675 None:intergenic 35.0%
TAAAGCCAAAATATACGGTC+AGG + chr7_1:26273945-26273964 Msa1015090:intron 35.0%
! TTTTCTTTGTAGAGGTAGGA+AGG - chr7_1:26274072-26274091 None:intergenic 35.0%
AAAAGGCTTCACAAAGAAGA+TGG + chr7_1:26274277-26274296 Msa1015090:intron 35.0%
AATCCTCTACAACTGCAATA+TGG + chr7_1:26274337-26274356 Msa1015090:intron 35.0%
ACAAAAATGAAGTATGGTGG+GGG - chr7_1:26274536-26274555 None:intergenic 35.0%
! CACGAGAAACAACTTTGAAA+AGG - chr7_1:26274613-26274632 None:intergenic 35.0%
CGTTTACATGGCGATTTATA+GGG - chr7_1:26274843-26274862 None:intergenic 35.0%
TCGTTTACATGGCGATTTAT+AGG - chr7_1:26274844-26274863 None:intergenic 35.0%
! CAAAGTTAAGTTAGTTGGTG+GGG - chr7_1:26274951-26274970 None:intergenic 35.0%
GTCAAAGTTAAGTTAGTTGG+TGG - chr7_1:26274953-26274972 None:intergenic 35.0%
! GACAAGTTGAGGTACTATAT+AGG + chr7_1:26275143-26275162 Msa1015090:intron 35.0%
! TATAGGTTTAGGATCCTCAT+AGG + chr7_1:26275160-26275179 Msa1015090:intron 35.0%
! ATAGGTTTAGGATCCTCATA+GGG + chr7_1:26275161-26275180 Msa1015090:intron 35.0%
GATATTTGAGAAAGGTAGTC+AGG - chr7_1:26275227-26275246 None:intergenic 35.0%
TTTATCTCTCCATGTAGCAA+AGG + chr7_1:26275836-26275855 Msa1015090:intron 35.0%
AACGGCTAAGAATAAAAGCA+AGG - chr7_1:26275911-26275930 None:intergenic 35.0%
TTATTCTTAGCCGTTGAACA+TGG + chr7_1:26275916-26275935 Msa1015090:intron 35.0%
! CTAGTATTTAAAGCTGCCAA+TGG - chr7_1:26275969-26275988 None:intergenic 35.0%
AACCAAATAAACTGATGTGG+AGG - chr7_1:26276028-26276047 None:intergenic 35.0%
TGGTTCAATCGGTTGAAATA+TGG + chr7_1:26276043-26276062 Msa1015090:intron 35.0%
TCTCAAACGATTCATCATAG+AGG - chr7_1:26276142-26276161 None:intergenic 35.0%
CAATCCAACAACTGATTGTT+AGG + chr7_1:26276203-26276222 Msa1015090:intron 35.0%
! GGTCTTTTTCTCCTTAAAAC+TGG + chr7_1:26276225-26276244 Msa1015090:intron 35.0%
! CTTTTTCTCCTTAAAACTGG+AGG + chr7_1:26276228-26276247 Msa1015090:intron 35.0%
TTGAACCAACCTAATGGAAT+CGG + chr7_1:26276309-26276328 Msa1015090:intron 35.0%
! ACAATTGAACCGATTCCATT+AGG - chr7_1:26276321-26276340 None:intergenic 35.0%
!! TATTTGGTTCAAGTTGAACC+GGG - chr7_1:26276373-26276392 None:intergenic 35.0%
!! CTATTTGGTTCAAGTTGAAC+CGG - chr7_1:26276374-26276393 None:intergenic 35.0%
ACCAAATAGTTGAACCAATC+CGG + chr7_1:26276385-26276404 Msa1015090:intron 35.0%
!! CGTAGTGTAATTTTAGTGCA+AGG - chr7_1:26276465-26276484 None:intergenic 35.0%
GAGAAAGAAATTGTAGTAGG+TGG - chr7_1:26276561-26276580 None:intergenic 35.0%
GTAAAAGTTATGAATGTGGC+TGG - chr7_1:26276766-26276785 None:intergenic 35.0%
TTTCATCCATATATCGGACA+AGG - chr7_1:26277027-26277046 None:intergenic 35.0%
! GGGTTGTTTCATCCATATAT+CGG - chr7_1:26277033-26277052 None:intergenic 35.0%
ATTTACCGCTTAAAACCAGA+TGG + chr7_1:26277083-26277102 Msa1015090:intron 35.0%
ATGAGATAAAGAACTACTGG+AGG + chr7_1:26277256-26277275 Msa1015090:CDS 35.0%
AACTGTCAATCTCAAGAACA+AGG + chr7_1:26277312-26277331 Msa1015090:CDS 35.0%
GTTCAGCAATGTTGGAAATT+TGG - chr7_1:26277392-26277411 None:intergenic 35.0%
! GAGATAATATTGGTGTCCAT+AGG - chr7_1:26277414-26277433 None:intergenic 35.0%
TCCAAAATTCCTTGGTAAGA+GGG - chr7_1:26277441-26277460 None:intergenic 35.0%
TTCCAAAATTCCTTGGTAAG+AGG - chr7_1:26277442-26277461 None:intergenic 35.0%
GAAATGGTTCCAAAATTCCT+TGG - chr7_1:26277449-26277468 None:intergenic 35.0%
! AACTGATGATGAGTTGGAAA+TGG - chr7_1:26277465-26277484 None:intergenic 35.0%
TTGTCACTGCAACTACTAAA+TGG + chr7_1:26277540-26277559 Msa1015090:CDS 35.0%
ACAAGATCCTGATGTACGAA+AGG + chr7_1:26272225-26272244 Msa1015090:CDS 40.0%
CAAGATCCTGATGTACGAAA+GGG + chr7_1:26272226-26272245 Msa1015090:CDS 40.0%
AAGTCTTCTTCCATTGTCCA+TGG - chr7_1:26272253-26272272 None:intergenic 40.0%
ATTACCAGCAGATTTAGCCA+AGG - chr7_1:26272323-26272342 None:intergenic 40.0%
AAAGAATGACCTAGCTTGGT+AGG + chr7_1:26272493-26272512 Msa1015090:intron 40.0%
AAGAATGACCTAGCTTGGTA+GGG + chr7_1:26272494-26272513 Msa1015090:intron 40.0%
TTAAGAAACCCTACCAAGCT+AGG - chr7_1:26272505-26272524 None:intergenic 40.0%
ATATTCCCTCGTCTAACATC+AGG - chr7_1:26272628-26272647 None:intergenic 40.0%
ATGATCAAGAGTTGTTCCTC+AGG - chr7_1:26272655-26272674 None:intergenic 40.0%
! TGAATGTTGGTGAGGTTTGT+TGG + chr7_1:26273395-26273414 Msa1015090:intron 40.0%
! GAATGTTGGTGAGGTTTGTT+GGG + chr7_1:26273396-26273415 Msa1015090:intron 40.0%
AAACTGCCGATCATATCGAA+CGG + chr7_1:26273647-26273666 Msa1015090:intron 40.0%
CATCTGTTGTAGAGGATCAT+TGG + chr7_1:26273867-26273886 Msa1015090:intron 40.0%
CACACCCACCTTATTGAAAA+TGG + chr7_1:26273899-26273918 Msa1015090:intron 40.0%
ACACCATATTGCAGTTGTAG+AGG - chr7_1:26274343-26274362 None:intergenic 40.0%
! CAAAAATGAAGTATGGTGGG+GGG - chr7_1:26274535-26274554 None:intergenic 40.0%
AAAAGAGAGAGAGAGAGAAC+AGG + chr7_1:26274878-26274897 Msa1015090:intron 40.0%
AACCTCAATGTCATGGTCAT+TGG + chr7_1:26274921-26274940 Msa1015090:intron 40.0%
ATCCAATGACCATGACATTG+AGG - chr7_1:26274926-26274945 None:intergenic 40.0%
TAGCTGGTTGTCTATAGGAA+AGG - chr7_1:26275197-26275216 None:intergenic 40.0%
! TGACCCTCTATTTTCCAACT+AGG + chr7_1:26275444-26275463 Msa1015090:intron 40.0%
GTGCCTAGTTGGAAAATAGA+GGG - chr7_1:26275450-26275469 None:intergenic 40.0%
TGTGCCTAGTTGGAAAATAG+AGG - chr7_1:26275451-26275470 None:intergenic 40.0%
ATACAAAACGTGTGCCTAGT+TGG - chr7_1:26275461-26275480 None:intergenic 40.0%
! ACTAGGCACACGTTTTGTAT+AGG + chr7_1:26275461-26275480 Msa1015090:intron 40.0%
AACCAAATGCTTTCTACCTG+AGG + chr7_1:26275749-26275768 Msa1015090:intron 40.0%
!! GCTTGTTTTCCTTTGCTACA+TGG - chr7_1:26275848-26275867 None:intergenic 40.0%
GTATCTGATTGAGAGGTTTG+AGG - chr7_1:26275942-26275961 None:intergenic 40.0%
TCAATCAGATACACTGCCAT+TGG + chr7_1:26275950-26275969 Msa1015090:intron 40.0%
GACCTCCACATCAGTTTATT+TGG + chr7_1:26276023-26276042 Msa1015090:intron 40.0%
AGACCCTAACAATCAGTTGT+TGG - chr7_1:26276210-26276229 None:intergenic 40.0%
! GTTTGAACCCTCCAGTTTTA+AGG - chr7_1:26276239-26276258 None:intergenic 40.0%
! TTGAACCGATTCCATTAGGT+TGG - chr7_1:26276317-26276336 None:intergenic 40.0%
AAACCAACCGATAAACTAGC+CGG + chr7_1:26276345-26276364 Msa1015090:intron 40.0%
!! ACCGGATTGGTTCAACTATT+TGG - chr7_1:26276389-26276408 None:intergenic 40.0%
TAGTGTTGTCAAAACCGGAT+TGG - chr7_1:26276402-26276421 None:intergenic 40.0%
GGTGGCATGGTTATAAATTG+AGG - chr7_1:26276543-26276562 None:intergenic 40.0%
AGAAATTGTAGTAGGTGGCA+TGG - chr7_1:26276556-26276575 None:intergenic 40.0%
TGTGTGCAGTGAGAAAAGTA+AGG - chr7_1:26276717-26276736 None:intergenic 40.0%
TAATCATTCACCAATGCAGG+TGG + chr7_1:26277196-26277215 Msa1015090:intron 40.0%
!! ATCTCATTATCGGTTCTTCC+CGG - chr7_1:26277243-26277262 None:intergenic 40.0%
TAAAGAACTACTGGAGGACA+AGG + chr7_1:26277262-26277281 Msa1015090:CDS 40.0%
!! CAGCTTGCTTGATATGCTTT+TGG - chr7_1:26277290-26277309 None:intergenic 40.0%
TTCCAACATTGCTGAACCTA+TGG + chr7_1:26277395-26277414 Msa1015090:CDS 40.0%
AGAGGGTGGTGAGATAATAT+TGG - chr7_1:26277424-26277443 None:intergenic 40.0%
AAAATTCCTTGGTAAGAGGG+TGG - chr7_1:26277438-26277457 None:intergenic 40.0%
! ACCCTCTTACCAAGGAATTT+TGG + chr7_1:26277437-26277456 Msa1015090:CDS 40.0%
TTGTTCTAACTACTGGAGCA+TGG + chr7_1:26277509-26277528 Msa1015090:CDS 40.0%
CCAAACACCTTCACCATGAT+TGG - chr7_1:26272296-26272315 None:intergenic 45.0%
!! CCAATCATGGTGAAGGTGTT+TGG + chr7_1:26272293-26272312 Msa1015090:CDS 45.0%
!! TGAAGGTGTTTGGAACTCCT+TGG + chr7_1:26272303-26272322 Msa1015090:CDS 45.0%
AACTCCTTGGCTAAATCTGC+TGG + chr7_1:26272316-26272335 Msa1015090:CDS 45.0%
TTCGACCTGATGTTAGACGA+GGG + chr7_1:26272620-26272639 Msa1015090:CDS 45.0%
ACGAGGGAATATTACACCTG+AGG + chr7_1:26272636-26272655 Msa1015090:CDS 45.0%
TTCATGCTAAGTGGGGAAAC+AGG + chr7_1:26272680-26272699 Msa1015090:CDS 45.0%
GCATCGTGTTGTGGTTATAG+AGG - chr7_1:26273848-26273867 None:intergenic 45.0%
ACAACAGATGCATCGTGTTG+TGG - chr7_1:26273857-26273876 None:intergenic 45.0%
ACACGATGCATCTGTTGTAG+AGG + chr7_1:26273859-26273878 Msa1015090:intron 45.0%
AGCCAAAATATACGGTCAGG+AGG + chr7_1:26273948-26273967 Msa1015090:intron 45.0%
! CTCCTCCTGACCGTATATTT+TGG - chr7_1:26273953-26273972 None:intergenic 45.0%
GTACTCGGTTCTCGTTTACA+TGG - chr7_1:26274855-26274874 None:intergenic 45.0%
TAGGAGCAACCTCAATGTCA+TGG + chr7_1:26274914-26274933 Msa1015090:intron 45.0%
TTTGAGAAAGGTAGTCAGGG+TGG - chr7_1:26275223-26275242 None:intergenic 45.0%
!! TGCCTCAGGTAGAAAGCATT+TGG - chr7_1:26275754-26275773 None:intergenic 45.0%
! AGGTTTGAGGCCATGTTCAA+CGG - chr7_1:26275929-26275948 None:intergenic 45.0%
TGGCAGTGTATCTGATTGAG+AGG - chr7_1:26275949-26275968 None:intergenic 45.0%
TGGGGTAGTGTTGTCAAAAC+CGG - chr7_1:26276407-26276426 None:intergenic 45.0%
TTTAAGTATGCCCGCCCTAA+CGG + chr7_1:26276819-26276838 Msa1015090:intron 45.0%
! TATGCCAACTTGTGCCGTTA+GGG - chr7_1:26276836-26276855 None:intergenic 45.0%
! TTATGCCAACTTGTGCCGTT+AGG - chr7_1:26276837-26276856 None:intergenic 45.0%
AGTCGTCCTTGTCCGATATA+TGG + chr7_1:26277018-26277037 Msa1015090:intron 45.0%
GTCCATAGGTTCAGCAATGT+TGG - chr7_1:26277400-26277419 None:intergenic 45.0%
! GTAGGGAACTGATGATGAGT+TGG - chr7_1:26277471-26277490 None:intergenic 45.0%
!! AGTTAATTAAATAATAATAA+AGG + chr7_1:26272381-26272400 Msa1015090:intron 5.0%
!!! TATAAATTTCTTATTTTTAT+TGG - chr7_1:26273422-26273441 None:intergenic 5.0%
!!! TTTTTTTTATTATTTAAGAA+AGG - chr7_1:26274757-26274776 None:intergenic 5.0%
!!! TAAATATATATATTTTTGAA+CGG - chr7_1:26275263-26275282 None:intergenic 5.0%
!!! AAAAATAGTTATTTTTAATA+TGG - chr7_1:26275286-26275305 None:intergenic 5.0%
!!! TTTATTTTTTTTATAAGAAA+AGG - chr7_1:26275503-26275522 None:intergenic 5.0%
CATGGTCCCTTTCGTACATC+AGG - chr7_1:26272235-26272254 None:intergenic 50.0%
CTGATGTACGAAAGGGACCA+TGG + chr7_1:26272233-26272252 Msa1015090:CDS 50.0%
ACGAAAGGGACCATGGACAA+TGG + chr7_1:26272240-26272259 Msa1015090:CDS 50.0%
AACGTACCGGAAAGAGTTGC+AGG + chr7_1:26272578-26272597 Msa1015090:CDS 50.0%
CTTCGACCTGATGTTAGACG+AGG + chr7_1:26272619-26272638 Msa1015090:CDS 50.0%
!! GGCTTTAGAAGCGACATGCA+AGG - chr7_1:26273932-26273951 None:intergenic 50.0%
! AAATGAAGTATGGTGGGGGG+TGG - chr7_1:26274532-26274551 None:intergenic 50.0%
AGGAACAAGTACGCCCTATG+AGG - chr7_1:26275177-26275196 None:intergenic 50.0%
GGAGCTAGCTGGTTGTCTAT+AGG - chr7_1:26275202-26275221 None:intergenic 50.0%
CTTTCTACCTGAGGCATGCA+TGG + chr7_1:26275758-26275777 Msa1015090:intron 50.0%
GATTTCTCCATGCATGCCTC+AGG - chr7_1:26275768-26275787 None:intergenic 50.0%
!! GAACCGGCTAGTTTATCGGT+TGG - chr7_1:26276351-26276370 None:intergenic 50.0%
!! GTTCAAGTTGAACCGGGAAC+CGG - chr7_1:26276367-26276386 None:intergenic 50.0%
GAATGTGGCTGGGTTTGTGA+TGG - chr7_1:26276755-26276774 None:intergenic 50.0%
! CGATTTTCGACCACCTGCAT+TGG - chr7_1:26277209-26277228 None:intergenic 50.0%
ATCTCACCACCCTCTTACCA+AGG + chr7_1:26277429-26277448 Msa1015090:CDS 50.0%
CCGAAGCCTGCAACTCTTTC+CGG - chr7_1:26272587-26272606 None:intergenic 55.0%
CCGGAAAGAGTTGCAGGCTT+CGG + chr7_1:26272584-26272603 Msa1015090:CDS 55.0%
GAAAGAGTTGCAGGCTTCGG+TGG + chr7_1:26272587-26272606 Msa1015090:CDS 55.0%
!! CCGGGAACCGGCTAGTTTAT+CGG - chr7_1:26276355-26276374 None:intergenic 55.0%
! CCGATAAACTAGCCGGTTCC+CGG + chr7_1:26276352-26276371 Msa1015090:intron 55.0%
GTGGGGGGTGAGAACTCTAG+TGG - chr7_1:26274500-26274519 None:intergenic 60.0%
! TGAAGTATGGTGGGGGGTGG+TGG - chr7_1:26274529-26274548 None:intergenic 60.0%
GTAGTCAGGGTGGAGCTAGC+TGG - chr7_1:26275213-26275232 None:intergenic 60.0%
! CCAACTTGTGCCGTTAGGGC+GGG - chr7_1:26276832-26276851 None:intergenic 60.0%
! GCCAACTTGTGCCGTTAGGG+CGG - chr7_1:26276833-26276852 None:intergenic 60.0%
! GTATGGTGGGGGGTGGTGGT+GGG - chr7_1:26274525-26274544 None:intergenic 65.0%
! AGTATGGTGGGGGGTGGTGG+TGG - chr7_1:26274526-26274545 None:intergenic 65.0%
CCCGCCCTAACGGCACAAGT+TGG + chr7_1:26276829-26276848 Msa1015090:intron 65.0%
!! GGGTGGTGGTGGGAGGTGGG+GGG - chr7_1:26274515-26274534 None:intergenic 75.0%
!! GGGGTGGTGGTGGGAGGTGG+GGG - chr7_1:26274516-26274535 None:intergenic 75.0%
!! GGGGGTGGTGGTGGGAGGTG+GGG - chr7_1:26274517-26274536 None:intergenic 75.0%
!! GGGGGGTGGTGGTGGGAGGT+GGG - chr7_1:26274518-26274537 None:intergenic 75.0%
!! TGGGGGGTGGTGGTGGGAGG+TGG - chr7_1:26274519-26274538 None:intergenic 75.0%
!! TGGTGGGGGGTGGTGGTGGG+AGG - chr7_1:26274522-26274541 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 26272199 26277569 26272199 ID=Msa1015090;Name=Msa1015090
chr7_1 mRNA 26272199 26277569 26272199 ID=Msa1015090-mRNA-1;Parent=Msa1015090;Name=Msa1015090-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|3|0|207
chr7_1 exon 26272199 26272337 26272199 ID=Msa1015090-mRNA-1:exon:5739;Parent=Msa1015090-mRNA-1
chr7_1 exon 26272572 26272701 26272572 ID=Msa1015090-mRNA-1:exon:5740;Parent=Msa1015090-mRNA-1
chr7_1 exon 26277215 26277569 26277215 ID=Msa1015090-mRNA-1:exon:5741;Parent=Msa1015090-mRNA-1
chr7_1 CDS 26272199 26272337 26272199 ID=Msa1015090-mRNA-1:cds;Parent=Msa1015090-mRNA-1
chr7_1 CDS 26272572 26272701 26272572 ID=Msa1015090-mRNA-1:cds;Parent=Msa1015090-mRNA-1
chr7_1 CDS 26277215 26277569 26277215 ID=Msa1015090-mRNA-1:cds;Parent=Msa1015090-mRNA-1
Gene Sequence

>Msa1015090

ATGGACAAAAAAGAGTGCAGTTCTTCACAAGATCCTGATGTACGAAAGGGACCATGGACAATGGAAGAAGACTTGATCTTGATCAACTATATTGCCAATCATGGTGAAGGTGTTTGGAACTCCTTGGCTAAATCTGCTGGTCTTAAACGTACCGGAAAGAGTTGCAGGCTTCGGTGGCTAAACTATCTTCGACCTGATGTTAGACGAGGGAATATTACACCTGAGGAACAACTCTTGATCATTGAACTTCATGCTAAGTGGGGAAACAGGTGGTCGAAAATCGCAAAACATTTACCGGGAAGAACCGATAATGAGATAAAGAACTACTGGAGGACAAGGATCCAAAAGCATATCAAGCAAGCTGAAAACTGTCAATCTCAAGAACAAGGTTCTGATATTCAAATAAATGATGATAATAATAATCAACTTATAGCAAGCACAAGCCAAATTTCCAACATTGCTGAACCTATGGACACCAATATTATCTCACCACCCTCTTACCAAGGAATTTTGGAACCATTTCCAACTCATCATCAGTTCCCTACAATTTCTGATCAATCAAGTTGTTCTAACTACTGGAGCATGGAAGATCTCTTGTCACTGCAACTACTAAATGGTGATTAA
Protein sequence

>Msa1015090

MDKKECSSSQDPDVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIIELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQAENCQSQEQGSDIQINDDNNNQLIASTSQISNIAEPMDTNIISPPSYQGILEPFPTHHQFPTISDQSSCSNYWSMEDLLSLQLLNGD*