AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1015230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1015230 MtrunA17_Chr7g0228401 80.671 507 70 3 1 482 1 504 0.0 813
Msa1015230 MtrunA17_Chr7g0228531 48.117 478 183 9 1 475 1 416 1.96e-142 415
Msa1015230 MtrunA17_Chr7g0228481 47.280 478 187 10 1 475 1 416 3.43e-134 394
Msa1015230 MtrunA17_Chr1g0177901 61.650 206 75 1 268 473 5 206 2.52e-84 258
Msa1015230 MtrunA17_Chr7g0233161 48.208 307 119 3 4 308 82 350 2.25e-83 261
Msa1015230 MtrunA17_Chr7g0233061 33.833 467 198 10 1 465 1 358 3.47e-68 222
Msa1015230 MtrunA17_Chr4g0046181 44.839 310 131 3 1 308 1 272 5.48e-66 214
Msa1015230 MtrunA17_Chr3g0117511 48.039 204 98 2 206 409 139 334 1.58e-50 178
Msa1015230 MtrunA17_Chr7g0233151 51.765 170 65 4 307 474 1 155 2.03e-48 164
Msa1015230 MtrunA17_Chr4g0058991 52.500 160 67 2 227 386 187 337 2.97e-46 167
Msa1015230 MtrunA17_Chr5g0429661 53.435 131 53 3 260 383 125 254 2.49e-43 156
Msa1015230 MtrunA17_Chr7g0238631 61.000 100 38 1 260 358 116 215 9.15e-36 139
Msa1015230 MtrunA17_Chr1g0157731 53.465 101 46 1 260 359 94 194 2.37e-32 131
Msa1015230 MtrunA17_Chr3g0139671 53.465 101 46 1 260 359 88 188 3.44e-32 130
Msa1015230 MtrunA17_Chr5g0397841 56.842 95 41 0 257 351 110 204 7.70e-31 124
Msa1015230 MtrunA17_Chr4g0022901 40.714 140 78 3 257 393 15 152 1.08e-28 114
Msa1015230 MtrunA17_Chr4g0008551 52.083 96 46 0 260 355 41 136 2.77e-28 115
Msa1015230 MtrunA17_Chr4g0046171 49.640 139 53 4 338 474 1 124 4.91e-27 105
Msa1015230 MtrunA17_Chr3g0133601 47.115 104 55 0 250 353 30 133 7.17e-27 108
Msa1015230 MtrunA17_Chr5g0401731 48.113 106 55 0 248 353 6 111 7.30e-27 110
Msa1015230 MtrunA17_Chr4g0053431 50.000 94 47 0 260 353 8 101 9.22e-27 108
Msa1015230 MtrunA17_Chr2g0323351 44.444 117 61 2 257 372 14 127 1.14e-26 108
Msa1015230 MtrunA17_Chr4g0022931 35.220 159 82 4 257 409 15 158 1.36e-26 108
Msa1015230 MtrunA17_Chr7g0270891 32.973 185 112 4 257 437 14 190 2.86e-26 109
Msa1015230 MtrunA17_Chr4g0022911 43.810 105 56 2 257 358 15 119 3.51e-26 107
Msa1015230 MtrunA17_Chr2g0281071 49.485 97 48 1 260 355 18 114 1.69e-25 107
Msa1015230 MtrunA17_Chr4g0037141 45.763 118 56 3 254 363 11 128 1.70e-25 105
Msa1015230 MtrunA17_Chr4g0058631 41.221 131 72 3 257 382 14 144 3.22e-25 106
Msa1015230 MtrunA17_Chr1g0211161 46.939 98 51 1 257 353 15 112 3.37e-25 103
Msa1015230 MtrunA17_Chr8g0385321 45.283 106 56 2 254 357 11 116 3.76e-25 105
Msa1015230 MtrunA17_Chr4g0048511 49.485 97 48 1 260 355 18 114 3.96e-25 106
Msa1015230 MtrunA17_Chr6g0460661 34.356 163 91 2 251 413 10 156 5.09e-25 101
Msa1015230 MtrunA17_Chr3g0117091 45.000 100 54 1 257 355 14 113 6.56e-25 105
Msa1015230 MtrunA17_Chr1g0193801 45.918 98 52 1 257 353 14 111 8.61e-25 105
Msa1015230 MtrunA17_Chr6g0480581 46.392 97 52 0 255 351 2 98 1.10e-24 102
Msa1015230 MtrunA17_Chr8g0342541 41.176 102 59 1 255 355 12 113 1.12e-24 104
Msa1015230 MtrunA17_Chr4g0055981 39.231 130 76 2 260 386 60 189 1.13e-24 102
Msa1015230 MtrunA17_Chr5g0435101 45.631 103 55 1 254 355 10 112 1.75e-24 101
Msa1015230 MtrunA17_Chr3g0131121 46.667 105 54 2 255 357 12 116 1.84e-24 103
Msa1015230 MtrunA17_Chr1g0193371 42.241 116 64 2 257 369 14 129 2.47e-24 104
Msa1015230 MtrunA17_Chr2g0328771 42.478 113 60 2 257 364 22 134 2.52e-24 103
Msa1015230 MtrunA17_Chr7g0254261 34.259 216 118 5 255 467 87 281 2.98e-24 103
Msa1015230 MtrunA17_Chr5g0410961 43.810 105 58 1 252 355 9 113 3.00e-24 103
Msa1015230 MtrunA17_Chr5g0417621 38.255 149 84 2 222 369 106 247 3.32e-24 104
Msa1015230 MtrunA17_Chr8g0342521 42.157 102 58 1 255 355 12 113 4.13e-24 103
Msa1015230 MtrunA17_Chr6g0454921 44.231 104 58 0 250 353 8 111 6.70e-24 99.4
Msa1015230 MtrunA17_Chr8g0354661 47.321 112 56 2 243 352 25 135 8.38e-24 104
Msa1015230 MtrunA17_Chr2g0330041 41.176 102 59 1 255 355 12 113 1.06e-23 102
Msa1015230 MtrunA17_Chr5g0397231 39.535 129 77 1 257 384 14 142 1.12e-23 101
Msa1015230 MtrunA17_Chr5g0395281 47.872 94 48 1 260 352 17 110 1.18e-23 101
Msa1015230 MtrunA17_Chr5g0440781 48.113 106 53 2 254 357 11 116 1.28e-23 97.8
Msa1015230 MtrunA17_Chr2g0309911 43.750 96 53 1 259 353 15 110 1.30e-23 101
Msa1015230 MtrunA17_Chr3g0088461 47.000 100 52 1 257 355 24 123 1.44e-23 101
Msa1015230 MtrunA17_Chr3g0099131 48.000 100 51 1 254 352 40 139 1.46e-23 103
Msa1015230 MtrunA17_Chr5g0437321 48.936 94 48 0 260 353 22 115 1.54e-23 100
Msa1015230 MtrunA17_Chr7g0274581 44.681 94 51 1 260 352 17 110 1.75e-23 98.2
Msa1015230 MtrunA17_Chr7g0271241 44.792 96 52 1 257 351 14 109 1.76e-23 102
Msa1015230 MtrunA17_Chr1g0154031 48.936 94 47 1 260 352 81 174 1.82e-23 102
Msa1015230 MtrunA17_Chr5g0440761 48.113 106 53 2 254 357 11 116 1.97e-23 99.8
Msa1015230 MtrunA17_Chr6g0452271 43.689 103 57 1 254 355 11 113 2.05e-23 100
Msa1015230 MtrunA17_Chr1g0187761 41.964 112 63 2 260 369 17 128 2.06e-23 99.4
Msa1015230 MtrunA17_Chr4g0042501 44.144 111 61 1 260 369 108 218 2.16e-23 102
Msa1015230 MtrunA17_Chr4g0032401 38.889 144 81 3 257 393 19 162 2.20e-23 100
Msa1015230 MtrunA17_Chr3g0115821 45.745 94 50 1 260 352 17 110 2.21e-23 101
Msa1015230 MtrunA17_Chr5g0441141 48.113 106 53 2 254 357 11 116 2.31e-23 99.8
Msa1015230 MtrunA17_Chr4g0039971 47.872 94 48 1 260 352 18 111 2.35e-23 101
Msa1015230 MtrunA17_Chr3g0080861 47.619 105 53 2 257 359 39 143 2.69e-23 102
Msa1015230 MtrunA17_Chr8g0387421 45.361 97 52 1 257 352 14 110 4.79e-23 99.8
Msa1015230 MtrunA17_Chr8g0346561 47.872 94 48 1 260 352 17 110 6.22e-23 99.0
Msa1015230 MtrunA17_Chr7g0275911 48.936 94 47 1 260 352 17 110 6.62e-23 97.8
Msa1015230 MtrunA17_Chr8g0349261 49.474 95 46 2 260 352 18 112 7.10e-23 98.6
Msa1015230 MtrunA17_Chr3g0125801 50.000 92 46 0 260 351 19 110 9.32e-23 98.2
Msa1015230 MtrunA17_Chr1g0203411 46.809 94 49 1 260 352 17 110 9.35e-23 98.2
Msa1015230 MtrunA17_Chr4g0044421 43.269 104 58 1 253 355 10 113 1.03e-22 95.5
Msa1015230 MtrunA17_Chr8g0342481 39.806 103 60 2 255 355 12 114 1.05e-22 100
Msa1015230 MtrunA17_Chr2g0311221 48.936 94 47 1 260 352 19 112 1.35e-22 98.6
Msa1015230 MtrunA17_Chr4g0070641 46.809 94 49 1 260 352 17 110 1.41e-22 94.4
Msa1015230 MtrunA17_Chr7g0261281 45.745 94 50 1 260 352 17 110 1.43e-22 97.4
Msa1015230 MtrunA17_Chr2g0323411 47.423 97 50 1 260 355 17 113 1.55e-22 98.2
Msa1015230 MtrunA17_Chr4g0070611 46.809 94 49 1 260 352 17 110 2.51e-22 97.4
Msa1015230 MtrunA17_Chr4g0022891 40.952 105 61 1 257 360 14 118 2.88e-22 95.5
Msa1015230 MtrunA17_Chr1g0167661 45.631 103 53 2 260 359 17 119 2.96e-22 95.9
Msa1015230 MtrunA17_Chr4g0042671 45.745 94 50 1 260 352 17 110 3.29e-22 98.6
Msa1015230 MtrunA17_Chr4g0057031 45.745 94 50 1 260 352 17 110 4.81e-22 95.9
Msa1015230 MtrunA17_Chr7g0240821 41.441 111 61 3 260 367 6 115 8.81e-22 94.0
Msa1015230 MtrunA17_Chr1g0167691 45.745 94 50 1 260 352 17 110 1.10e-21 94.4
Msa1015230 MtrunA17_Chr5g0417821 44.118 102 56 1 251 351 3 104 1.93e-21 94.4
Msa1015230 MtrunA17_Chr6g0460671 47.253 91 48 0 260 350 102 192 2.19e-21 95.5
Msa1015230 MtrunA17_Chr7g0217741 45.745 94 50 1 260 352 17 110 2.58e-21 94.4
Msa1015230 MtrunA17_Chr5g0434571 45.745 94 50 1 260 352 53 146 3.08e-21 95.1
Msa1015230 MtrunA17_Chr5g0441131 45.192 104 55 2 254 355 8 111 4.05e-21 90.9
Msa1015230 MtrunA17_Chr8g0362231 40.909 110 63 1 260 367 25 134 4.80e-21 95.5
Msa1015230 MtrunA17_Chr1g0151941 43.158 95 52 2 260 352 17 111 5.29e-21 92.4
Msa1015230 MtrunA17_Chr4g0022881 40.404 99 58 1 255 352 12 110 5.33e-21 91.7
Msa1015230 MtrunA17_Chr3g0135311 36.424 151 91 4 254 399 11 161 7.42e-21 93.6
Msa1015230 MtrunA17_Chr5g0416341 45.161 93 51 0 260 352 29 121 7.43e-21 95.1
Msa1015230 MtrunA17_Chr3g0110351 34.545 165 101 4 260 421 17 177 7.72e-21 93.2
Msa1015230 MtrunA17_Chr2g0327351 38.983 118 70 2 254 369 11 128 8.08e-21 93.2
Msa1015230 MtrunA17_Chr5g0434931 40.000 100 59 1 257 355 37 136 1.28e-20 92.0
Msa1015230 MtrunA17_Chr3g0103281 42.000 100 57 1 254 352 11 110 1.53e-20 92.4
Msa1015230 MtrunA17_Chr8g0343831 42.424 99 56 1 255 352 8 106 1.56e-20 90.9
Msa1015230 MtrunA17_Chr3g0104491 51.250 80 35 1 307 382 17 96 2.53e-20 90.9
Msa1015230 MtrunA17_Chr3g0121241 41.489 94 54 1 260 352 47 140 2.71e-20 91.3
Msa1015230 MtrunA17_Chr7g0228991 35.000 120 74 2 234 352 11 127 3.42e-20 90.5
Msa1015230 MtrunA17_Chr1g0152011 38.333 120 71 3 254 370 11 130 3.58e-20 91.7
Msa1015230 MtrunA17_Chr7g0228231 39.286 112 67 1 242 352 1 112 4.11e-20 88.6
Msa1015230 MtrunA17_Chr7g0247131 51.351 74 34 1 281 352 3 76 4.11e-20 90.1
Msa1015230 MtrunA17_Chr1g0209661 40.541 111 61 2 260 365 32 142 5.18e-20 90.5
Msa1015230 MtrunA17_Chr4g0028311 42.991 107 58 3 260 363 17 123 5.41e-20 90.9
Msa1015230 MtrunA17_Chr1g0192411 37.956 137 75 2 257 392 14 141 5.98e-20 92.0
Msa1015230 MtrunA17_Chr1g0203441 43.299 97 54 1 257 352 15 111 9.05e-20 89.4
Msa1015230 MtrunA17_Chr7g0228891 43.617 94 52 1 260 352 17 110 9.31e-20 89.0
Msa1015230 MtrunA17_Chr5g0400821 41.964 112 62 3 254 362 11 122 9.91e-20 89.7
Msa1015230 MtrunA17_Chr4g0013361 32.500 160 99 4 260 410 15 174 1.29e-19 89.4
Msa1015230 MtrunA17_Chr5g0434911 40.000 100 59 1 257 355 23 122 1.31e-19 89.0
Msa1015230 MtrunA17_Chr1g0180391 42.000 100 57 1 254 352 18 117 1.39e-19 87.8
Msa1015230 MtrunA17_Chr7g0220341 40.777 103 58 1 253 352 23 125 1.75e-19 88.6
Msa1015230 MtrunA17_Chr6g0470971 40.187 107 63 1 257 362 16 122 1.85e-19 88.6
Msa1015230 MtrunA17_Chr6g0450101 35.156 128 81 2 242 367 1 128 2.10e-19 86.7
Msa1015230 MtrunA17_Chr5g0434841 41.000 100 58 1 257 355 22 121 2.35e-19 89.0
Msa1015230 MtrunA17_Chr8g0334881 43.000 100 55 2 260 357 15 114 2.59e-19 88.6
Msa1015230 MtrunA17_Chr4g0068061 41.000 100 58 1 257 355 14 113 2.63e-19 89.0
Msa1015230 MtrunA17_Chr6g0453471 42.553 94 53 1 260 352 17 110 2.88e-19 89.4
Msa1015230 MtrunA17_Chr4g0054391 41.000 100 57 2 254 351 11 110 2.93e-19 88.2
Msa1015230 MtrunA17_Chr1g0168661 37.705 122 69 3 260 375 26 146 3.90e-19 87.0
Msa1015230 MtrunA17_Chr5g0434831 40.206 97 57 1 260 355 12 108 4.39e-19 85.1
Msa1015230 MtrunA17_Chr2g0322521 39.695 131 78 1 234 363 8 138 5.19e-19 89.0
Msa1015230 MtrunA17_Chr1g0186061 41.489 94 54 1 260 352 25 118 5.67e-19 86.7
Msa1015230 MtrunA17_Chr1g0194301 30.952 210 129 7 247 445 24 228 5.88e-19 87.0
Msa1015230 MtrunA17_Chr4g0030881 39.640 111 59 1 260 362 12 122 6.20e-19 86.7
Msa1015230 MtrunA17_Chr7g0217221 43.617 94 52 1 260 352 17 110 7.12e-19 86.7
Msa1015230 MtrunA17_Chr7g0264641 41.584 101 57 2 254 352 11 111 9.36e-19 86.3
Msa1015230 MtrunA17_Chr2g0327821 39.316 117 67 2 260 375 11 124 1.21e-18 85.1
Msa1015230 MtrunA17_Chr5g0421201 52.941 85 34 2 309 392 12 91 1.54e-18 83.6
Msa1015230 MtrunA17_Chr5g0434901 48.485 66 34 0 290 355 9 74 2.63e-18 80.9
Msa1015230 MtrunA17_Chr4g0060721 40.777 103 55 3 260 358 18 118 3.70e-18 85.5
Msa1015230 MtrunA17_Chr4g0072751 42.574 101 56 2 254 352 11 111 4.79e-18 85.5
Msa1015230 MtrunA17_Chr7g0254411 42.574 101 56 2 260 358 17 117 6.22e-18 85.1
Msa1015230 MtrunA17_Chr8g0360111 40.206 97 57 1 257 352 27 123 1.30e-17 82.8
Msa1015230 MtrunA17_Chr3g0092401 41.237 97 56 1 260 355 18 114 1.48e-17 83.6
Msa1015230 MtrunA17_Chr6g0453211 40.426 94 55 1 260 352 17 110 1.64e-17 83.6
Msa1015230 MtrunA17_Chr1g0194951 43.617 94 52 1 260 352 17 110 2.19e-17 83.6
Msa1015230 MtrunA17_Chr1g0194291 37.168 113 70 1 241 352 7 119 4.67e-17 81.3
Msa1015230 MtrunA17_Chr3g0099141 36.036 111 70 1 227 336 12 122 1.43e-16 76.6
Msa1015230 MtrunA17_Chr3g0104501 55.357 56 25 0 253 308 129 184 3.28e-16 77.0
Msa1015230 MtrunA17_Chr2g0323321 39.474 76 45 1 260 334 16 91 5.32e-16 73.9
Msa1015230 MtrunA17_Chr7g0269831 44.531 128 60 4 257 381 14 133 6.61e-16 79.0
Msa1015230 MtrunA17_Chr2g0293911 41.489 94 54 1 260 352 29 122 1.23e-15 77.8
Msa1015230 MtrunA17_Chr7g0229101 46.970 66 35 0 290 355 8 73 1.47e-15 75.5
Msa1015230 MtrunA17_Chr3g0093811 42.500 80 42 2 277 352 1 80 2.50e-15 76.3
Msa1015230 MtrunA17_Chr5g0425591 45.238 84 44 2 254 335 8 91 3.08e-15 71.2
Msa1015230 MtrunA17_Chr4g0068921 38.318 107 65 1 252 357 21 127 3.68e-15 73.9
Msa1015230 MtrunA17_Chr7g0238651 30.588 170 100 4 257 415 7 169 4.00e-15 76.6
Msa1015230 MtrunA17_Chr6g0487491 36.893 103 55 3 260 352 17 119 4.73e-15 75.1
Msa1015230 MtrunA17_Chr5g0395221 43.056 72 40 1 260 330 17 88 2.67e-14 68.6
Msa1015230 MtrunA17_Chr7g0229131 43.939 66 37 0 290 355 8 73 7.83e-14 69.7
Msa1015230 MtrunA17_Chr4g0042611 40.278 72 42 1 260 330 17 88 9.31e-14 67.0
Msa1015230 MtrunA17_Chr8g0342511 36.111 72 45 1 259 329 16 87 3.51e-13 65.5
Msa1015230 MtrunA17_Chr8g0342531 34.177 79 51 1 259 336 16 94 4.12e-13 67.4
Msa1015230 MtrunA17_Chr7g0274481 36.957 92 57 1 259 350 9 99 9.73e-13 70.9
Msa1015230 MtrunA17_Chr8g0342471 37.333 75 45 2 259 331 16 90 1.18e-12 65.5
Msa1015230 MtrunA17_Chr6g0483051 35.165 91 58 1 260 350 72 161 1.70e-12 69.7
Msa1015230 MtrunA17_Chr6g0483051 39.362 94 56 1 257 350 120 212 2.35e-12 69.3
Msa1015230 MtrunA17_Chr8g0342461 36.000 75 46 2 259 331 16 90 2.69e-12 64.3
Msa1015230 MtrunA17_Chr5g0397691 35.417 96 59 1 255 350 5 97 2.64e-11 65.9
Msa1015230 MtrunA17_Chr6g0453751 38.372 86 43 3 260 335 25 110 5.74e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1015230 AT4G18770.1 64.754 122 42 1 260 381 220 340 8.68e-48 171
Msa1015230 AT3G27785.1 41.250 240 123 7 153 386 94 321 2.13e-47 170
Msa1015230 AT5G40360.1 52.448 143 64 3 247 387 149 289 2.88e-42 154
Msa1015230 AT5G58850.1 44.848 165 75 2 254 402 102 266 1.56e-40 151
Msa1015230 AT5G11050.1 57.377 122 52 0 244 365 92 213 3.70e-40 150
Msa1015230 AT2G25230.1 52.033 123 58 1 260 382 29 150 5.10e-36 134
Msa1015230 AT3G09370.2 61.702 94 36 0 260 353 138 231 3.62e-35 137
Msa1015230 AT3G09370.1 61.702 94 36 0 260 353 133 226 3.87e-35 137
Msa1015230 AT3G09370.3 61.702 94 36 0 260 353 146 239 6.04e-35 137
Msa1015230 AT5G11510.3 55.446 101 44 1 260 359 84 184 2.06e-34 137
Msa1015230 AT5G11510.1 55.446 101 44 1 260 359 84 184 2.06e-34 137
Msa1015230 AT5G11510.4 55.446 101 44 1 260 359 84 184 2.06e-34 137
Msa1015230 AT5G11510.5 55.446 101 44 1 260 359 84 184 2.20e-34 137
Msa1015230 AT5G11510.2 55.446 101 44 1 260 359 84 184 2.40e-34 137
Msa1015230 AT5G02320.1 60.638 94 37 0 260 353 130 223 5.80e-34 134
Msa1015230 AT5G02320.2 60.638 94 37 0 260 353 130 223 5.80e-34 134
Msa1015230 AT5G02320.3 60.638 94 37 0 260 353 70 163 8.04e-34 133
Msa1015230 AT5G40430.1 46.923 130 65 3 254 382 51 177 2.80e-32 124
Msa1015230 AT4G32730.5 53.465 101 46 1 260 359 90 190 3.57e-32 131
Msa1015230 AT4G32730.4 53.465 101 46 1 260 359 90 190 3.57e-32 131
Msa1015230 AT4G32730.3 53.465 101 46 1 260 359 90 190 3.57e-32 131
Msa1015230 AT4G32730.2 53.465 101 46 1 260 359 90 190 3.57e-32 131
Msa1015230 AT4G32730.1 53.465 101 46 1 260 359 90 190 5.31e-32 130
Msa1015230 AT4G00540.2 44.521 146 64 4 216 357 75 207 1.77e-27 114
Msa1015230 AT4G00540.2 34.906 106 60 3 255 351 44 149 3.11e-11 65.5
Msa1015230 AT4G00540.1 44.521 146 64 4 216 357 73 205 3.38e-27 114
Msa1015230 AT4G00540.1 34.906 106 60 3 255 351 42 147 4.72e-11 65.1
Msa1015230 AT3G55730.1 53.125 96 45 0 260 355 59 154 1.96e-26 111
Msa1015230 AT1G57560.2 33.880 183 93 4 257 435 14 172 2.20e-26 108
Msa1015230 AT4G38620.1 48.544 103 52 1 254 355 11 113 1.18e-25 106
Msa1015230 AT4G33450.1 53.933 89 41 0 260 348 22 110 1.48e-25 105
Msa1015230 AT3G28470.1 46.000 100 53 1 254 352 11 110 2.52e-25 106
Msa1015230 AT4G21440.1 50.515 97 47 1 260 355 17 113 2.86e-25 107
Msa1015230 AT3G09230.1 50.000 96 48 0 260 355 58 153 3.42e-25 107
Msa1015230 AT1G22640.1 49.515 103 50 2 257 357 14 116 4.84e-25 104
Msa1015230 AT3G11440.2 50.000 94 46 1 260 352 46 139 9.63e-25 107
Msa1015230 AT5G12870.1 46.729 107 55 2 257 361 20 126 1.01e-24 103
Msa1015230 AT5G67300.1 50.000 94 47 0 260 353 9 102 1.22e-24 104
Msa1015230 AT3G50060.1 48.936 94 48 0 260 353 9 102 1.32e-24 103
Msa1015230 AT4G01680.1 39.062 128 66 3 257 381 14 132 1.70e-24 104
Msa1015230 AT4G01680.3 39.062 128 66 3 257 381 14 132 1.83e-24 102
Msa1015230 AT1G57560.1 45.918 98 52 1 257 353 14 111 1.88e-24 103
Msa1015230 AT4G09460.1 46.226 106 55 2 254 357 11 116 1.90e-24 102
Msa1015230 AT3G11440.3 50.000 94 46 1 260 352 46 139 2.51e-24 106
Msa1015230 AT3G11440.4 50.000 94 46 1 260 352 46 139 2.51e-24 106
Msa1015230 AT3G11440.1 50.000 94 46 1 260 352 46 139 2.51e-24 106
Msa1015230 AT4G37260.1 51.064 94 46 0 260 353 16 109 2.69e-24 103
Msa1015230 AT5G14750.1 46.392 97 51 1 257 352 18 114 3.85e-24 100
Msa1015230 AT4G28110.1 47.423 97 50 1 260 355 17 113 5.16e-24 102
Msa1015230 AT1G09540.1 45.918 98 52 1 257 353 14 111 5.24e-24 103
Msa1015230 AT3G13890.2 42.000 100 57 1 257 355 14 113 5.43e-24 103
Msa1015230 AT1G69560.1 46.939 98 52 0 254 351 104 201 5.87e-24 102
Msa1015230 AT4G34990.1 44.915 118 57 3 254 363 11 128 5.93e-24 101
Msa1015230 AT1G69560.2 46.939 98 52 0 254 351 120 217 6.53e-24 103
Msa1015230 AT1G17950.1 45.361 97 53 0 255 351 3 99 6.83e-24 100
Msa1015230 AT5G26660.1 44.000 100 55 1 257 355 14 113 9.04e-24 102
Msa1015230 AT3G12720.1 36.025 161 94 5 259 413 26 183 1.38e-23 101
Msa1015230 AT1G26780.1 45.045 111 60 1 260 369 101 211 1.44e-23 100
Msa1015230 AT3G29020.1 47.423 97 51 0 255 351 63 159 1.44e-23 99.4
Msa1015230 AT4G01680.2 36.429 140 65 3 257 381 14 144 1.53e-23 102
Msa1015230 AT4G26930.1 46.809 94 49 1 260 352 24 117 1.63e-23 102
Msa1015230 AT5G10280.1 46.078 102 54 1 252 352 9 110 1.68e-23 101
Msa1015230 AT3G29020.2 47.423 97 51 0 255 351 65 161 1.71e-23 100
Msa1015230 AT2G26960.1 42.241 116 66 1 256 370 21 136 1.73e-23 103
Msa1015230 AT3G13890.1 39.450 109 56 1 257 355 14 122 1.77e-23 102
Msa1015230 AT3G08500.1 46.000 100 53 1 257 355 32 131 1.78e-23 101
Msa1015230 AT1G26780.2 45.045 111 60 1 260 369 101 211 2.06e-23 101
Msa1015230 AT2G23290.1 47.115 104 55 0 250 353 6 109 2.35e-23 100
Msa1015230 AT4G05100.1 47.423 97 50 1 260 355 18 114 2.99e-23 100
Msa1015230 AT5G17800.1 46.392 97 52 0 255 351 91 187 3.09e-23 100
Msa1015230 AT1G63910.1 47.423 97 50 1 257 352 14 110 3.54e-23 101
Msa1015230 AT5G16770.1 36.601 153 72 4 260 407 17 149 3.66e-23 100
Msa1015230 AT5G16770.2 36.601 153 72 4 260 407 17 149 3.66e-23 100
Msa1015230 AT5G16770.4 36.601 153 72 4 260 407 17 149 3.75e-23 100
Msa1015230 AT5G16770.3 36.601 153 72 4 260 407 17 149 3.75e-23 100
Msa1015230 AT5G40330.1 44.330 97 53 1 257 352 14 110 4.12e-23 97.8
Msa1015230 AT2G16720.1 46.602 103 53 2 257 357 14 116 4.20e-23 99.0
Msa1015230 AT5G52600.1 44.144 111 58 2 259 368 16 123 4.39e-23 97.4
Msa1015230 AT5G06100.1 47.872 94 48 1 260 352 37 130 5.41e-23 101
Msa1015230 AT5G55020.1 45.455 99 53 1 260 357 31 129 6.83e-23 102
Msa1015230 AT3G61250.1 46.809 94 49 1 260 352 17 110 8.45e-23 99.0
Msa1015230 AT5G06100.5 47.872 94 48 1 260 352 37 130 1.04e-22 101
Msa1015230 AT5G06100.2 47.872 94 48 1 260 352 37 130 1.04e-22 101
Msa1015230 AT5G06100.3 47.872 94 48 1 260 352 37 130 1.04e-22 101
Msa1015230 AT5G06100.4 47.872 94 48 1 260 352 37 130 1.04e-22 101
Msa1015230 AT1G16490.1 44.860 107 57 2 260 364 19 125 1.17e-22 97.8
Msa1015230 AT3G23250.1 33.898 177 106 6 260 430 17 188 1.67e-22 97.8
Msa1015230 AT1G56160.1 45.631 103 54 2 252 352 10 112 2.17e-22 97.8
Msa1015230 AT1G35515.1 42.718 103 57 2 257 357 14 116 2.89e-22 95.1
Msa1015230 AT2G39880.1 45.833 96 52 0 260 355 53 148 3.17e-22 98.6
Msa1015230 AT2G32460.1 46.392 97 51 1 260 355 23 119 3.26e-22 99.8
Msa1015230 AT4G12350.1 44.681 94 51 1 260 352 17 110 3.48e-22 97.1
Msa1015230 AT3G02940.2 45.361 97 52 1 260 355 17 113 3.50e-22 97.4
Msa1015230 AT5G65230.1 45.745 94 50 1 260 352 17 110 3.67e-22 97.4
Msa1015230 AT2G32460.2 46.392 97 51 1 260 355 11 107 3.69e-22 99.8
Msa1015230 AT1G79180.1 47.368 95 47 2 260 352 19 112 4.27e-22 96.7
Msa1015230 AT3G27920.1 44.330 97 53 1 257 352 16 112 4.32e-22 95.1
Msa1015230 AT3G02940.1 45.361 97 52 1 260 355 17 113 4.65e-22 97.1
Msa1015230 AT3G02940.3 45.361 97 52 1 260 355 17 113 4.65e-22 97.1
Msa1015230 AT4G17785.2 40.566 106 62 1 251 355 9 114 4.81e-22 97.8
Msa1015230 AT4G17785.1 40.566 106 62 1 251 355 9 114 4.99e-22 97.8
Msa1015230 AT3G01530.1 40.678 118 68 2 237 352 6 123 7.25e-22 94.0
Msa1015230 AT1G34670.1 44.681 94 51 1 260 352 17 110 7.59e-22 97.4
Msa1015230 AT4G22680.1 44.554 101 55 1 253 352 10 110 9.55e-22 95.1
Msa1015230 AT1G74430.1 45.263 95 51 1 260 353 17 111 1.56e-21 94.7
Msa1015230 AT1G73410.1 43.636 110 61 1 255 363 4 113 1.61e-21 94.0
Msa1015230 AT5G54230.1 45.745 94 50 1 260 352 17 110 1.80e-21 95.5
Msa1015230 AT1G73410.2 43.636 110 61 1 255 363 4 113 2.06e-21 92.4
Msa1015230 AT3G13540.1 42.268 97 55 1 260 355 28 124 2.12e-21 93.6
Msa1015230 AT5G60890.1 47.423 97 50 1 257 352 14 110 2.91e-21 94.4
Msa1015230 AT5G57620.1 40.833 120 67 3 254 369 11 130 3.44e-21 94.7
Msa1015230 AT5G07690.1 44.118 102 56 1 257 357 14 115 7.43e-21 94.0
Msa1015230 AT1G66230.1 45.263 95 49 2 260 352 17 110 7.68e-21 92.8
Msa1015230 AT1G14350.2 34.000 150 92 3 260 402 28 177 1.03e-20 94.7
Msa1015230 AT1G14350.1 34.000 150 92 3 260 402 28 177 1.03e-20 94.7
Msa1015230 AT5G56110.1 43.000 100 56 1 254 352 11 110 1.29e-20 92.8
Msa1015230 AT2G47190.1 38.596 114 69 1 240 352 5 118 1.49e-20 92.0
Msa1015230 AT1G06180.1 42.553 94 53 1 260 352 17 110 1.92e-20 90.9
Msa1015230 AT3G48920.1 44.898 98 51 2 257 352 20 116 2.59e-20 90.9
Msa1015230 AT2G02820.2 33.679 193 103 6 260 431 33 221 3.47e-20 93.6
Msa1015230 AT3G53200.1 37.681 138 78 4 260 390 14 150 3.52e-20 90.1
Msa1015230 AT5G07700.1 44.330 97 53 1 257 352 14 110 4.02e-20 92.0
Msa1015230 AT5G07700.2 44.330 97 53 1 257 352 14 110 4.02e-20 92.0
Msa1015230 AT2G02820.1 41.284 109 61 2 260 365 33 141 4.04e-20 93.2
Msa1015230 AT2G31180.1 33.548 155 96 3 260 408 17 170 4.61e-20 89.7
Msa1015230 AT5G61420.2 44.330 97 53 1 257 352 14 110 4.98e-20 92.0
Msa1015230 AT5G23000.1 44.898 98 52 2 260 355 17 114 5.37e-20 91.3
Msa1015230 AT1G74080.1 43.299 97 54 1 257 352 14 110 5.76e-20 91.3
Msa1015230 AT5G15310.4 42.553 94 53 1 260 352 17 110 6.10e-20 89.4
Msa1015230 AT2G02820.3 41.284 109 61 2 260 365 33 141 6.39e-20 91.3
Msa1015230 AT4G37780.1 43.158 95 52 2 260 352 17 111 6.84e-20 90.5
Msa1015230 AT1G18570.1 41.346 104 60 1 250 352 8 111 6.93e-20 91.3
Msa1015230 AT5G15310.1 42.553 94 53 1 260 352 17 110 8.67e-20 90.5
Msa1015230 AT5G35550.1 40.179 112 64 2 245 355 6 115 8.88e-20 89.4
Msa1015230 AT2G26950.1 33.835 133 79 2 243 370 4 132 1.01e-19 91.3
Msa1015230 AT5G15310.2 42.553 94 53 1 260 352 17 110 1.02e-19 90.1
Msa1015230 AT1G66370.1 44.211 95 50 2 260 352 13 106 1.04e-19 89.0
Msa1015230 AT3G01140.2 42.553 94 53 1 260 352 17 110 1.30e-19 90.5
Msa1015230 AT3G62610.1 44.330 97 53 1 257 352 14 110 1.68e-19 90.1
Msa1015230 AT5G26660.2 44.318 88 38 1 268 355 6 82 1.83e-19 89.7
Msa1015230 AT3G01140.1 42.553 94 53 1 260 352 60 153 1.91e-19 90.5
Msa1015230 AT5G39700.1 43.011 93 53 0 260 352 59 151 2.97e-19 85.9
Msa1015230 AT5G16600.1 45.263 95 49 2 260 352 17 110 3.38e-19 89.0
Msa1015230 AT5G62470.1 41.935 93 54 0 260 352 17 109 4.71e-19 89.0
Msa1015230 AT5G65790.1 43.119 109 58 3 254 358 11 119 5.24e-19 89.0
Msa1015230 AT4G25560.1 43.299 97 54 1 257 352 12 108 5.95e-19 87.4
Msa1015230 AT3G24310.1 41.489 94 54 1 260 352 23 116 6.68e-19 87.0
Msa1015230 AT5G14750.3 50.794 63 31 0 290 352 18 80 6.95e-19 84.3
Msa1015230 AT5G59780.3 43.299 97 54 1 260 355 13 109 1.00e-18 85.9
Msa1015230 AT3G46130.1 44.330 97 53 1 260 355 14 110 1.12e-18 86.3
Msa1015230 AT3G47600.1 30.769 182 97 4 260 415 17 195 1.20e-18 87.4
Msa1015230 AT5G62320.1 42.991 107 52 3 260 357 18 124 1.45e-18 85.5
Msa1015230 AT4G13480.1 41.489 94 54 1 260 352 11 104 1.87e-18 85.5
Msa1015230 AT3G27810.1 40.426 94 55 1 260 352 25 118 1.96e-18 84.7
Msa1015230 AT3G12820.1 42.553 94 53 1 260 352 19 112 2.04e-18 85.1
Msa1015230 AT3G30210.1 37.963 108 65 2 260 365 32 139 2.24e-18 85.5
Msa1015230 AT2G47460.1 36.585 123 75 2 260 379 17 139 2.37e-18 87.0
Msa1015230 AT3G49690.1 42.574 101 56 2 254 352 11 111 2.54e-18 86.3
Msa1015230 AT5G40350.1 39.216 102 61 1 252 352 14 115 2.82e-18 84.0
Msa1015230 AT1G79180.2 36.496 137 52 4 260 361 19 155 2.89e-18 86.3
Msa1015230 AT5G35550.2 54.545 66 30 0 290 355 53 118 2.98e-18 85.1
Msa1015230 AT5G49330.1 41.489 94 54 1 260 352 17 110 3.99e-18 85.9
Msa1015230 AT1G68320.1 38.739 111 63 2 260 365 24 134 4.69e-18 84.7
Msa1015230 AT3G60460.1 41.000 100 57 2 260 357 16 115 5.37e-18 85.1
Msa1015230 AT1G08810.1 40.541 111 64 2 260 368 17 127 7.01e-18 84.3
Msa1015230 AT2G36890.1 40.708 113 64 3 254 363 11 123 8.93e-18 84.3
Msa1015230 AT1G48000.1 40.426 94 55 1 260 352 37 130 1.18e-17 82.8
Msa1015230 AT5G62470.2 41.489 94 54 1 260 352 17 110 1.30e-17 84.7
Msa1015230 AT1G66380.1 45.918 98 50 2 257 352 10 106 1.54e-17 79.7
Msa1015230 AT5G14340.1 39.362 94 56 1 260 352 29 122 1.69e-17 83.2
Msa1015230 AT2G36890.2 40.708 113 64 3 254 363 52 164 1.99e-17 84.0
Msa1015230 AT3G28910.1 41.584 101 57 2 260 358 17 117 2.02e-17 83.6
Msa1015230 AT1G74650.1 42.553 94 53 1 260 352 17 110 3.14e-17 83.2
Msa1015230 AT1G18710.1 37.895 95 58 1 260 353 17 111 5.40e-17 81.3
Msa1015230 AT1G25340.1 41.489 94 54 1 260 352 23 116 5.84e-17 81.6
Msa1015230 AT3G53200.2 40.566 106 58 2 290 390 12 117 7.64e-17 79.7
Msa1015230 AT5G52260.1 37.719 114 70 1 257 369 14 127 9.76e-17 80.5
Msa1015230 AT3G18100.1 40.625 96 57 0 255 350 544 639 2.11e-16 82.8
Msa1015230 AT3G18100.1 40.385 104 58 3 250 350 486 588 1.67e-15 80.1
Msa1015230 AT3G18100.1 38.739 111 59 4 260 368 445 548 1.11e-12 70.9
Msa1015230 AT1G25340.2 38.182 110 60 2 260 365 23 128 2.88e-16 79.3
Msa1015230 AT3G18100.3 40.625 96 57 0 255 350 496 591 3.01e-16 82.0
Msa1015230 AT3G18100.3 40.385 104 58 3 250 350 438 540 2.54e-15 79.3
Msa1015230 AT3G18100.3 38.739 111 59 4 260 368 397 500 1.59e-12 70.5
Msa1015230 AT3G18100.4 40.625 96 57 0 255 350 383 478 3.32e-16 82.0
Msa1015230 AT3G18100.4 40.385 104 58 3 250 350 325 427 2.67e-15 79.0
Msa1015230 AT3G18100.4 38.739 111 59 4 260 368 284 387 2.12e-12 70.1
Msa1015230 AT3G18100.2 40.625 96 57 0 255 350 331 426 4.47e-16 81.3
Msa1015230 AT3G18100.2 40.385 104 58 3 250 350 273 375 3.64e-15 78.6
Msa1015230 AT3G18100.2 38.739 111 59 4 260 368 232 335 2.74e-12 69.7
Msa1015230 AT1G25340.3 40.860 93 51 1 260 352 23 111 5.62e-16 79.0
Msa1015230 AT1G56650.1 44.898 98 51 2 257 352 10 106 1.11e-15 77.0
Msa1015230 AT3G12820.2 50.794 63 31 0 290 352 2 64 1.15e-15 75.9
Msa1015230 AT3G27810.2 31.126 151 96 2 290 440 7 149 1.25e-15 75.5
Msa1015230 AT1G22640.3 58.621 58 23 1 301 357 2 59 2.26e-15 75.1
Msa1015230 AT5G40350.2 46.032 63 34 0 290 352 8 70 4.70e-15 73.6
Msa1015230 AT1G66390.1 44.898 98 51 2 257 352 10 106 4.73e-15 75.5
Msa1015230 AT5G49620.1 40.426 94 55 1 260 352 31 124 9.43e-15 75.5
Msa1015230 AT3G47600.2 31.126 151 76 3 290 415 42 189 1.73e-14 75.1
Msa1015230 AT2G37630.1 34.783 138 85 3 260 393 7 143 2.49e-14 74.7
Msa1015230 AT3G06490.1 39.362 94 56 1 260 352 24 117 2.80e-14 74.3
Msa1015230 AT5G59780.2 45.455 66 36 0 290 355 23 88 3.49e-14 72.0
Msa1015230 AT3G46130.3 45.455 66 36 0 290 355 13 78 6.98e-14 71.6
Msa1015230 AT3G46130.4 45.455 66 36 0 290 355 23 88 7.12e-14 71.6
Msa1015230 AT1G71030.2 43.939 66 36 1 293 357 5 70 8.80e-14 70.1
Msa1015230 AT1G71030.1 43.939 66 36 1 293 357 19 84 1.01e-13 70.1
Msa1015230 AT1G14350.3 34.821 112 66 3 298 402 23 134 2.15e-13 72.0
Msa1015230 AT1G14350.4 34.821 112 66 3 298 402 23 134 2.15e-13 72.0
Msa1015230 AT5G14750.4 48.077 52 27 0 301 352 2 53 3.84e-13 67.0
Msa1015230 AT5G14750.2 48.077 52 27 0 301 352 2 53 3.84e-13 67.0
Msa1015230 AT1G66380.3 52.381 63 30 0 290 352 11 73 4.91e-13 65.9
Msa1015230 AT3G23250.2 31.852 135 82 5 301 430 2 131 8.90e-13 68.2
Msa1015230 AT1G09770.1 36.957 92 57 1 259 350 9 99 1.70e-12 70.5
Msa1015230 AT5G49620.2 35.185 108 55 2 260 352 31 138 1.46e-11 65.9

Find 110 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATACTGACAAAGGAATT+TGG 0.159842 7_1:-27277246 Msa1015230:CDS
TTGTTTGGTGTAAAGGTTAT+TGG 0.233953 7_1:+27277412 None:intergenic
GGGTATGGCACAATGAATTA+TGG 0.245222 7_1:-27275104 Msa1015230:CDS
AAATTCCTTTGTCAGTATTA+AGG 0.267984 7_1:+27277248 None:intergenic
AAATTTCTTTGCCAGTATTA+AGG 0.278768 7_1:+27277362 None:intergenic
CACAATCTGAATGATGGAAT+TGG 0.297929 7_1:-27277749 None:intergenic
CATGGCTAACCAAGACTTTA+GGG 0.299977 7_1:-27277545 Msa1015230:CDS
CCCACCGATGCAAGAAATAT+TGG 0.312984 7_1:+27277102 None:intergenic
GTGTAAAGGTTATTGGAATT+TGG 0.313633 7_1:+27277419 None:intergenic
TAATACTGACAAAGGAATTT+GGG 0.318492 7_1:-27277245 Msa1015230:CDS
ACATGGCTAACCAAGACTTT+AGG 0.330248 7_1:-27277546 Msa1015230:CDS
CAACAAAATCTCTTTCAATA+TGG 0.332090 7_1:-27277214 Msa1015230:CDS
CGCAATCTGCACTATGTTCA+TGG 0.332854 7_1:+27275289 None:intergenic
CCATCTTCAACCGGACATTA+AGG 0.338665 7_1:-27276623 Msa1015230:intron
ATGTTCCTCTCAAACTATTT+CGG 0.338788 7_1:+27275375 None:intergenic
TTTGTTATTGTTTGGTGTAA+AGG 0.341775 7_1:+27277405 None:intergenic
CTCAAACTATTTCGGCGGTT+TGG 0.351317 7_1:+27275383 None:intergenic
AAAATCGCTCTGGGATCTAT+TGG 0.375361 7_1:+27277450 None:intergenic
ATCAAAGCTCACAAGATGAT+TGG 0.378576 7_1:-27275509 Msa1015230:CDS
ATGCATGAACACCTTAATAC+TGG 0.383219 7_1:-27277373 Msa1015230:CDS
CACCCCTGTATGCAGGGGTT+GGG 0.387527 7_1:+27277479 None:intergenic
TAGTCCTTCATCATTGTGTT+GGG 0.395650 7_1:+27277066 None:intergenic
TTGTAGGAATCTTGTCCAAT+TGG 0.401670 7_1:-27276734 Msa1015230:intron
GGAGTTCCAGCGGTTCTTGA+TGG 0.404645 7_1:+27275436 None:intergenic
GCACCCCTGTATGCAGGGGT+TGG 0.419549 7_1:+27277478 None:intergenic
TGATCCCAACCCCTGCATAC+AGG 0.426292 7_1:-27277483 Msa1015230:CDS
GGTTGCAAGAGAACCATTGC+GGG 0.430044 7_1:+27277652 None:intergenic
GAGATTGCTAAGTTTATGAA+TGG 0.435455 7_1:-27276682 Msa1015230:CDS
GTGTTTGCACCCCTGTATGC+AGG 0.436695 7_1:+27277472 None:intergenic
TGGTGAAACTTCACAATCTC+AGG 0.440048 7_1:-27277194 Msa1015230:CDS
GAAATATTGGCTTGAAGCCT+AGG 0.446132 7_1:+27277115 None:intergenic
GACTATTGATATTCAACAAA+GGG 0.460037 7_1:-27277005 Msa1015230:CDS
GCCAATATTTCTTGCATCGG+TGG 0.464214 7_1:-27277103 Msa1015230:CDS
TAGGAATCTTGTCCAATTGG+TGG 0.464780 7_1:-27276731 Msa1015230:CDS
TTAGTCCTTCATCATTGTGT+TGG 0.467760 7_1:+27277065 None:intergenic
GGTATGGCACAATGAATTAT+GGG 0.469170 7_1:-27275103 Msa1015230:CDS
CCTTAATGTCCGGTTGAAGA+TGG 0.472965 7_1:+27276623 None:intergenic
GGCACAATGAATTATGGGTT+CGG 0.475894 7_1:-27275098 Msa1015230:CDS
TCAAAGCTCACAAGATGATT+GGG 0.477028 7_1:-27275508 Msa1015230:CDS
AGCATTCAGACTGCGCTTAG+TGG 0.477709 7_1:+27275415 None:intergenic
GATCCCAACCCCTGCATACA+GGG 0.482454 7_1:-27277482 Msa1015230:CDS
GGGATTTCAATACAAGCAAA+AGG 0.485642 7_1:-27276985 Msa1015230:CDS
GAAAATTCGTTGATATATGA+AGG 0.491471 7_1:+27277508 None:intergenic
GAAATTGCAAGTAGATTGCC+TGG 0.497474 7_1:-27275473 Msa1015230:CDS
ACCCATCTTTGTTAGTGCCT+AGG 0.499541 7_1:-27277132 Msa1015230:CDS
ACTAGGACCAGGGTTGGTAT+TGG 0.499880 7_1:+27275244 None:intergenic
CAAGCCAATATTTCTTGCAT+CGG 0.500115 7_1:-27277106 Msa1015230:CDS
AATTATGGGTTCGGATCGTA+TGG 0.505058 7_1:-27275089 Msa1015230:CDS
AGCCTAGGCACTAACAAAGA+TGG 0.508071 7_1:+27277130 None:intergenic
TCATCATAAACTACTGATGT+TGG 0.510801 7_1:+27277157 None:intergenic
AAGTTTATGAATGGAAGAAT+CGG 0.512043 7_1:-27276673 Msa1015230:CDS
ATGGTACAACCATCTTCAAC+CGG 0.516159 7_1:-27276632 Msa1015230:CDS
CCAATATTTCTTGCATCGGT+GGG 0.522569 7_1:-27277102 Msa1015230:CDS
ATGATGCTCAACGGTGATGA+AGG 0.524326 7_1:-27275137 Msa1015230:CDS
TGTTTGCACCCCTGTATGCA+GGG 0.525476 7_1:+27277473 None:intergenic
CTATGCGGAGAATGTTCAAA+AGG 0.526742 7_1:-27275324 Msa1015230:CDS
GAAGAATCGGAAAACAGTGC+AGG 0.532629 7_1:-27276660 Msa1015230:CDS
ACTACTGATGTTGGTAGAGA+AGG 0.534133 7_1:+27277166 None:intergenic
TCAATACAAGCAAAAGGCTA+TGG 0.541281 7_1:-27276979 Msa1015230:CDS
GAAGGAATGACCAGTGGGTA+TGG 0.546294 7_1:-27275119 Msa1015230:CDS
GCCTAGGCACTAACAAAGAT+GGG 0.548332 7_1:+27277131 None:intergenic
AATACCCAACACAATGATGA+AGG 0.550572 7_1:-27277070 Msa1015230:CDS
AGAACTCCATCAAGAACCGC+TGG 0.553376 7_1:-27275442 Msa1015230:CDS
CAATGAACATCCTCTGAACA+TGG 0.553570 7_1:-27277563 Msa1015230:CDS
CAGTAGAAACCCTAAAGTCT+TGG 0.559115 7_1:+27277536 None:intergenic
ATTCATTGTGCCATACCCAC+TGG 0.563453 7_1:+27275109 None:intergenic
AACATTACCAATACCAACCC+TGG 0.565873 7_1:-27275251 Msa1015230:CDS
ACAAGATGATTGGGAACAAG+TGG 0.567686 7_1:-27275499 Msa1015230:CDS
TAGCCAACATCTTCTTCCAC+AGG 0.568426 7_1:+27275167 None:intergenic
AAAATTTGGGCTCAATAACT+GGG 0.569139 7_1:-27276707 Msa1015230:CDS
GAAAACAGTGCAGGGAGAGA+TGG 0.569754 7_1:-27276651 Msa1015230:CDS
CAACAAAATCTCTTTCAACA+TGG 0.572197 7_1:-27277328 Msa1015230:CDS
GAATGCCTTAATACTGACAA+AGG 0.573560 7_1:-27277253 Msa1015230:CDS
TATGGACTTCAGATGAGGAT+AGG 0.575612 7_1:-27276961 Msa1015230:intron
ATGGAGTTCTCAGTGCGCCC+AGG 0.578882 7_1:+27275455 None:intergenic
TGAAGGTTTCGCTGCTCCTG+TGG 0.580714 7_1:-27275183 Msa1015230:CDS
TGCGCTTAGTGGAGTTCCAG+CGG 0.585896 7_1:+27275426 None:intergenic
TGGGTTCGGATCGTATGGAA+TGG 0.589906 7_1:-27275084 Msa1015230:CDS
AACTACTGATGTTGATAGAG+AGG 0.592028 7_1:+27277279 None:intergenic
AACCCTGGTCCTAGTCATGT+TGG 0.596471 7_1:-27275236 Msa1015230:CDS
AACATGACTAGGACCAGGGT+TGG 0.597563 7_1:+27275238 None:intergenic
ACTTCATAACCAACATGACT+AGG 0.602220 7_1:+27275227 None:intergenic
AGACTATTGATATTCAACAA+AGG 0.610503 7_1:-27277006 Msa1015230:CDS
TAACCAACATGACTAGGACC+AGG 0.610691 7_1:+27275233 None:intergenic
AACCGCCGAAATAGTTTGAG+AGG 0.614124 7_1:-27275380 Msa1015230:CDS
TCTTGGTTAGCCATGTTCAG+AGG 0.617854 7_1:+27277553 None:intergenic
TTCCTCTCAAACTATTTCGG+CGG 0.620812 7_1:+27275378 None:intergenic
ACTACTGATGTTGATAGAGA+GGG 0.621646 7_1:+27277280 None:intergenic
GCTCCTGTGGAAGAAGATGT+TGG 0.621925 7_1:-27275170 Msa1015230:CDS
TGTGATTGTAGAAGGATACA+TGG 0.622166 7_1:-27275556 Msa1015230:intron
AACCAACATGACTAGGACCA+GGG 0.623604 7_1:+27275234 None:intergenic
GGTTATGAAGTTGCAAACAA+TGG 0.625006 7_1:-27275215 Msa1015230:CDS
AAAATCAGAGATCCCCGCAA+TGG 0.625636 7_1:-27277665 Msa1015230:CDS
GCAGTCTGAATGCTACAAGT+AGG 0.628497 7_1:-27275406 Msa1015230:CDS
AAGAATCGGAAAACAGTGCA+GGG 0.631304 7_1:-27276659 Msa1015230:CDS
AAATTGCAAGTAGATTGCCT+GGG 0.636725 7_1:-27275472 Msa1015230:CDS
GTAGGTGAAATAGTAGAACT+TGG 0.636823 7_1:+27277631 None:intergenic
TGGTTGCAAGAGAACCATTG+CGG 0.637065 7_1:+27277651 None:intergenic
CAAGATGATTGGGAACAAGT+GGG 0.643131 7_1:-27275498 Msa1015230:CDS
GAAGGATACATGGAGCGAAG+AGG 0.648775 7_1:-27275546 Msa1015230:CDS
GTTTGCACCCCTGTATGCAG+GGG 0.657497 7_1:+27277474 None:intergenic
AAGGCTATGGACTTCAGATG+AGG 0.659211 7_1:-27276966 Msa1015230:CDS
ATCCCAACCCCTGCATACAG+GGG 0.668235 7_1:-27277481 Msa1015230:CDS
TTCTATAGATTATCTCCATG+AGG 0.671451 7_1:+27275041 None:intergenic
GTGATGAAGGAATGACCAGT+GGG 0.678371 7_1:-27275124 Msa1015230:CDS
CTGGTGTAATGTGATGGTGT+AGG 0.684642 7_1:+27277613 None:intergenic
GTTGCAAGAGAACCATTGCG+GGG 0.691957 7_1:+27277653 None:intergenic
GGTGATGAAGGAATGACCAG+TGG 0.697218 7_1:-27275125 Msa1015230:CDS
TATGCAGCAATGATGCTCAA+CGG 0.720991 7_1:-27275146 Msa1015230:CDS
CATTAGCGAAATCACCTATG+CGG 0.726829 7_1:-27275339 Msa1015230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTAAAAAA+AGG + chr7_1:27276184-27276203 None:intergenic 0.0%
!!! ATTTTAAGAAAAGTAAAATA+TGG + chr7_1:27276691-27276710 None:intergenic 10.0%
!! AATTAACTAAAATAAGAAAT+TGG + chr7_1:27276826-27276845 None:intergenic 10.0%
!!! AATTCATTTTTGTTATTGTT+TGG + chr7_1:27275385-27275404 None:intergenic 15.0%
!! GTTTAATTATCACATTATAT+TGG - chr7_1:27276428-27276447 Msa1015230:intron 15.0%
!!! CTATTTTTCTGAATAAATAT+TGG - chr7_1:27276495-27276514 Msa1015230:intron 15.0%
!! AAATTTATAAACAATGTTCT+AGG - chr7_1:27276521-27276540 Msa1015230:intron 15.0%
!!! GAAATTTTTTCTGAAAAACT+AGG + chr7_1:27275058-27275077 None:intergenic 20.0%
!! GAAAAAATTTCTTATCTCTT+AGG - chr7_1:27275067-27275086 Msa1015230:CDS 20.0%
!!! ATATTGAAAGAGATTTTGTT+GGG + chr7_1:27275566-27275585 None:intergenic 20.0%
!! AACTAAAACCATGAAAATAT+TGG + chr7_1:27275882-27275901 None:intergenic 20.0%
!!! ATATTTTCATGGTTTTAGTT+TGG - chr7_1:27275882-27275901 Msa1015230:intron 20.0%
!!! ATTAGTTCAAGTTATGTTTA+AGG - chr7_1:27275921-27275940 Msa1015230:intron 20.0%
!!! TTAGTTCAAGTTATGTTTAA+GGG - chr7_1:27275922-27275941 Msa1015230:intron 20.0%
!!! TGATAATTAATTGCTTTGAA+TGG + chr7_1:27276323-27276342 None:intergenic 20.0%
!! ACATAATATTGAGATAAGTT+TGG - chr7_1:27276780-27276799 Msa1015230:intron 20.0%
!! ACTAAAATAAGAAATTGGTA+AGG + chr7_1:27276821-27276840 None:intergenic 20.0%
!!! TTCAATTACCATTTTTGAAA+TGG - chr7_1:27277143-27277162 Msa1015230:CDS 20.0%
!!! TCAATTACCATTTTTGAAAT+GGG - chr7_1:27277144-27277163 Msa1015230:CDS 20.0%
!! GATTTTTCTTGAGGAATTTT+AGG + chr7_1:27275100-27275119 None:intergenic 25.0%
! GAAAATTCGTTGATATATGA+AGG + chr7_1:27275274-27275293 None:intergenic 25.0%
!!! TTTGTTATTGTTTGGTGTAA+AGG + chr7_1:27275377-27275396 None:intergenic 25.0%
! AAATTTCTTTGCCAGTATTA+AGG + chr7_1:27275420-27275439 None:intergenic 25.0%
!! ATGTTGAAAGAGATTTTGTT+GGG + chr7_1:27275452-27275471 None:intergenic 25.0%
! AAATTCCTTTGTCAGTATTA+AGG + chr7_1:27275534-27275553 None:intergenic 25.0%
! TTAATACTGACAAAGGAATT+TGG - chr7_1:27275533-27275552 Msa1015230:CDS 25.0%
! TAATACTGACAAAGGAATTT+GGG - chr7_1:27275534-27275553 Msa1015230:CDS 25.0%
!! CATATTGAAAGAGATTTTGT+TGG + chr7_1:27275567-27275586 None:intergenic 25.0%
! CAACAAAATCTCTTTCAATA+TGG - chr7_1:27275565-27275584 Msa1015230:intron 25.0%
! AGACTATTGATATTCAACAA+AGG - chr7_1:27275773-27275792 Msa1015230:intron 25.0%
! GACTATTGATATTCAACAAA+GGG - chr7_1:27275774-27275793 Msa1015230:intron 25.0%
! AAGTTTATGAATGGAAGAAT+CGG - chr7_1:27276106-27276125 Msa1015230:intron 25.0%
!!! TGTCGTTTGCATTTTTAAAA+TGG + chr7_1:27276630-27276649 None:intergenic 25.0%
!! GAATAAAGCATTCATACATA+TGG + chr7_1:27276727-27276746 None:intergenic 25.0%
! TTTGAACAAATAGATACTTC+AGG - chr7_1:27276845-27276864 Msa1015230:intron 25.0%
! ATTAAAACAACCTACATGAA+AGG + chr7_1:27276896-27276915 None:intergenic 25.0%
! TTGTTTGGTAAGAATTAGTT+TGG + chr7_1:27276987-27277006 None:intergenic 25.0%
!!! ATAAAAGAGCATTGTTTGTT+TGG + chr7_1:27277002-27277021 None:intergenic 25.0%
!!! CAATTACCATTTTTGAAATG+GGG - chr7_1:27277145-27277164 Msa1015230:CDS 25.0%
! TAATCCACACATATATTGTT+TGG - chr7_1:27277200-27277219 Msa1015230:CDS 25.0%
AAAAAACTGGTGTAATGTGA+TGG + chr7_1:27275175-27275194 None:intergenic 30.0%
GCTTTGATTGTACAAAAAAC+TGG + chr7_1:27275188-27275207 None:intergenic 30.0%
GTGTAAAGGTTATTGGAATT+TGG + chr7_1:27275363-27275382 None:intergenic 30.0%
!! TTGTTTGGTGTAAAGGTTAT+TGG + chr7_1:27275370-27275389 None:intergenic 30.0%
! CATGTTGAAAGAGATTTTGT+TGG + chr7_1:27275453-27275472 None:intergenic 30.0%
CAACAAAATCTCTTTCAACA+TGG - chr7_1:27275451-27275470 Msa1015230:CDS 30.0%
TCATCATAAACTACTGATGT+TGG + chr7_1:27275625-27275644 None:intergenic 30.0%
! TCTGCTATCCAATATTTTCA+TGG - chr7_1:27275871-27275890 Msa1015230:intron 30.0%
TCCAATTGGTGGAAAAATTT+GGG - chr7_1:27276059-27276078 Msa1015230:intron 30.0%
AAAAATTTGGGCTCAATAAC+TGG - chr7_1:27276071-27276090 Msa1015230:intron 30.0%
AAAATTTGGGCTCAATAACT+GGG - chr7_1:27276072-27276091 Msa1015230:intron 30.0%
GAGATTGCTAAGTTTATGAA+TGG - chr7_1:27276097-27276116 Msa1015230:intron 30.0%
GTAAGGGATAAAAGCTAAAA+AGG + chr7_1:27276211-27276230 None:intergenic 30.0%
CATTCTAAGTGTATGTGTAA+GGG + chr7_1:27276227-27276246 None:intergenic 30.0%
GTACATATAGATGCATCAAA+TGG - chr7_1:27276271-27276290 Msa1015230:intron 30.0%
!!! CGTTTGCATTTTTAAAATGG+TGG + chr7_1:27276627-27276646 None:intergenic 30.0%
! TTACACTTTTCCTTTCATGT+AGG - chr7_1:27276883-27276902 Msa1015230:intron 30.0%
TGTATACATCAATTGTGATC+TGG - chr7_1:27277101-27277120 Msa1015230:CDS 30.0%
GTATACATCAATTGTGATCT+GGG - chr7_1:27277102-27277121 Msa1015230:CDS 30.0%
ATGTTCCTCTCAAACTATTT+CGG + chr7_1:27277407-27277426 None:intergenic 30.0%
GTAGGTGAAATAGTAGAACT+TGG + chr7_1:27275151-27275170 None:intergenic 35.0%
ATGCATGAACACCTTAATAC+TGG - chr7_1:27275406-27275425 Msa1015230:CDS 35.0%
! ACTACTGATGTTGATAGAGA+GGG + chr7_1:27275502-27275521 None:intergenic 35.0%
! AACTACTGATGTTGATAGAG+AGG + chr7_1:27275503-27275522 None:intergenic 35.0%
GAATGCCTTAATACTGACAA+AGG - chr7_1:27275526-27275545 Msa1015230:CDS 35.0%
CAAGCCAATATTTCTTGCAT+CGG - chr7_1:27275673-27275692 Msa1015230:intron 35.0%
AATACCCAACACAATGATGA+AGG - chr7_1:27275709-27275728 Msa1015230:intron 35.0%
TAGTCCTTCATCATTGTGTT+GGG + chr7_1:27275716-27275735 None:intergenic 35.0%
TTAGTCCTTCATCATTGTGT+TGG + chr7_1:27275717-27275736 None:intergenic 35.0%
!! TTTTGACGCTTTTGGTTGTT+GGG + chr7_1:27275742-27275761 None:intergenic 35.0%
!! TTTTTGACGCTTTTGGTTGT+TGG + chr7_1:27275743-27275762 None:intergenic 35.0%
!! ACAACCAAAAGCGTCAAAAA+AGG - chr7_1:27275743-27275762 Msa1015230:intron 35.0%
!! CAACCAAAAGCGTCAAAAAA+GGG - chr7_1:27275744-27275763 Msa1015230:intron 35.0%
GGGATTTCAATACAAGCAAA+AGG - chr7_1:27275794-27275813 Msa1015230:intron 35.0%
TCAATACAAGCAAAAGGCTA+TGG - chr7_1:27275800-27275819 Msa1015230:intron 35.0%
TTGTAGGAATCTTGTCCAAT+TGG - chr7_1:27276045-27276064 Msa1015230:intron 35.0%
GTCCAATTGGTGGAAAAATT+TGG - chr7_1:27276058-27276077 Msa1015230:intron 35.0%
!! AAAAAAGGCACCTTAATGTC+CGG + chr7_1:27276169-27276188 None:intergenic 35.0%
GCATTCTAAGTGTATGTGTA+AGG + chr7_1:27276228-27276247 None:intergenic 35.0%
GAAGATCCCCATTTCAAAAA+TGG + chr7_1:27277154-27277173 None:intergenic 35.0%
CACACCAAACAATATATGTG+TGG + chr7_1:27277207-27277226 None:intergenic 35.0%
!! TTGTTTGGTGTGATTGTAGA+AGG - chr7_1:27277215-27277234 Msa1015230:CDS 35.0%
TGTGATTGTAGAAGGATACA+TGG - chr7_1:27277223-27277242 Msa1015230:CDS 35.0%
ATCAAAGCTCACAAGATGAT+TGG - chr7_1:27277270-27277289 Msa1015230:CDS 35.0%
TCAAAGCTCACAAGATGATT+GGG - chr7_1:27277271-27277290 Msa1015230:CDS 35.0%
AAATTGCAAGTAGATTGCCT+GGG - chr7_1:27277307-27277326 Msa1015230:CDS 35.0%
ACTTCATAACCAACATGACT+AGG + chr7_1:27277555-27277574 None:intergenic 35.0%
GGTTATGAAGTTGCAAACAA+TGG - chr7_1:27277564-27277583 Msa1015230:CDS 35.0%
!!! AACAATGGTTTTAGCTCTGA+AGG - chr7_1:27277579-27277598 Msa1015230:CDS 35.0%
GGTATGGCACAATGAATTAT+GGG - chr7_1:27277676-27277695 Msa1015230:CDS 35.0%
! TTTCCTGAGTTTTTACCTCA+TGG - chr7_1:27277723-27277742 Msa1015230:CDS 35.0%
! GGGATCTCTGATTTTTCTTG+AGG + chr7_1:27275109-27275128 None:intergenic 40.0%
CAATGAACATCCTCTGAACA+TGG - chr7_1:27275216-27275235 Msa1015230:CDS 40.0%
ACATGGCTAACCAAGACTTT+AGG - chr7_1:27275233-27275252 Msa1015230:CDS 40.0%
CATGGCTAACCAAGACTTTA+GGG - chr7_1:27275234-27275253 Msa1015230:CDS 40.0%
CAGTAGAAACCCTAAAGTCT+TGG + chr7_1:27275246-27275265 None:intergenic 40.0%
!! AAAATCGCTCTGGGATCTAT+TGG + chr7_1:27275332-27275351 None:intergenic 40.0%
GTCGTTGAAAAAATCGCTCT+GGG + chr7_1:27275341-27275360 None:intergenic 40.0%
TGGTGAAACTTCACAATCTC+AGG - chr7_1:27275585-27275604 Msa1015230:intron 40.0%
! ACTACTGATGTTGGTAGAGA+AGG + chr7_1:27275616-27275635 None:intergenic 40.0%
!! GAAATATTGGCTTGAAGCCT+AGG + chr7_1:27275667-27275686 None:intergenic 40.0%
! CCAATATTTCTTGCATCGGT+GGG - chr7_1:27275677-27275696 Msa1015230:intron 40.0%
!! TTTGACGCTTTTGGTTGTTG+GGG + chr7_1:27275741-27275760 None:intergenic 40.0%
!!! CAACCCTTTTTTGACGCTTT+TGG + chr7_1:27275750-27275769 None:intergenic 40.0%
TATGGACTTCAGATGAGGAT+AGG - chr7_1:27275818-27275837 Msa1015230:intron 40.0%
TAGGAATCTTGTCCAATTGG+TGG - chr7_1:27276048-27276067 Msa1015230:intron 40.0%
! GCCCAAATTTTTCCACCAAT+TGG + chr7_1:27276063-27276082 None:intergenic 40.0%
AAGAATCGGAAAACAGTGCA+GGG - chr7_1:27276120-27276139 Msa1015230:intron 40.0%
ATGGTACAACCATCTTCAAC+CGG - chr7_1:27276147-27276166 Msa1015230:intron 40.0%
ACAAGATGATTGGGAACAAG+TGG - chr7_1:27277280-27277299 Msa1015230:CDS 40.0%
CAAGATGATTGGGAACAAGT+GGG - chr7_1:27277281-27277300 Msa1015230:CDS 40.0%
GAAATTGCAAGTAGATTGCC+TGG - chr7_1:27277306-27277325 Msa1015230:CDS 40.0%
TTCCTCTCAAACTATTTCGG+CGG + chr7_1:27277404-27277423 None:intergenic 40.0%
CATTAGCGAAATCACCTATG+CGG - chr7_1:27277440-27277459 Msa1015230:CDS 40.0%
! CTTTTGAACATTCTCCGCAT+AGG + chr7_1:27277457-27277476 None:intergenic 40.0%
CTATGCGGAGAATGTTCAAA+AGG - chr7_1:27277455-27277474 Msa1015230:CDS 40.0%
AACATTACCAATACCAACCC+TGG - chr7_1:27277528-27277547 Msa1015230:CDS 40.0%
TATGCAGCAATGATGCTCAA+CGG - chr7_1:27277633-27277652 Msa1015230:CDS 40.0%
GGGTATGGCACAATGAATTA+TGG - chr7_1:27277675-27277694 Msa1015230:CDS 40.0%
GGCACAATGAATTATGGGTT+CGG - chr7_1:27277681-27277700 Msa1015230:CDS 40.0%
AATTATGGGTTCGGATCGTA+TGG - chr7_1:27277690-27277709 Msa1015230:CDS 40.0%
TCTCCATGAGGTAAAAACTC+AGG + chr7_1:27277729-27277748 None:intergenic 40.0%
AAAATCAGAGATCCCCGCAA+TGG - chr7_1:27275114-27275133 Msa1015230:CDS 45.0%
TGGTTGCAAGAGAACCATTG+CGG + chr7_1:27275131-27275150 None:intergenic 45.0%
! CTGGTGTAATGTGATGGTGT+AGG + chr7_1:27275169-27275188 None:intergenic 45.0%
! TCTTGGTTAGCCATGTTCAG+AGG + chr7_1:27275229-27275248 None:intergenic 45.0%
GGTCGTTGAAAAAATCGCTC+TGG + chr7_1:27275342-27275361 None:intergenic 45.0%
ACCCATCTTTGTTAGTGCCT+AGG - chr7_1:27275647-27275666 Msa1015230:intron 45.0%
GCCTAGGCACTAACAAAGAT+GGG + chr7_1:27275651-27275670 None:intergenic 45.0%
AGCCTAGGCACTAACAAAGA+TGG + chr7_1:27275652-27275671 None:intergenic 45.0%
GCCAATATTTCTTGCATCGG+TGG - chr7_1:27275676-27275695 Msa1015230:intron 45.0%
CCCACCGATGCAAGAAATAT+TGG + chr7_1:27275680-27275699 None:intergenic 45.0%
AAGGCTATGGACTTCAGATG+AGG - chr7_1:27275813-27275832 Msa1015230:intron 45.0%
GAAGAATCGGAAAACAGTGC+AGG - chr7_1:27276119-27276138 Msa1015230:intron 45.0%
CCTTAATGTCCGGTTGAAGA+TGG + chr7_1:27276159-27276178 None:intergenic 45.0%
CCATCTTCAACCGGACATTA+AGG - chr7_1:27276156-27276175 Msa1015230:intron 45.0%
GCAGTCTGAATGCTACAAGT+AGG - chr7_1:27277373-27277392 Msa1015230:CDS 45.0%
CTCAAACTATTTCGGCGGTT+TGG + chr7_1:27277399-27277418 None:intergenic 45.0%
AACCGCCGAAATAGTTTGAG+AGG - chr7_1:27277399-27277418 Msa1015230:CDS 45.0%
CGCAATCTGCACTATGTTCA+TGG + chr7_1:27277493-27277512 None:intergenic 45.0%
AACCAACATGACTAGGACCA+GGG + chr7_1:27277548-27277567 None:intergenic 45.0%
TAACCAACATGACTAGGACC+AGG + chr7_1:27277549-27277568 None:intergenic 45.0%
TAGCCAACATCTTCTTCCAC+AGG + chr7_1:27277615-27277634 None:intergenic 45.0%
ATGATGCTCAACGGTGATGA+AGG - chr7_1:27277642-27277661 Msa1015230:CDS 45.0%
GTGATGAAGGAATGACCAGT+GGG - chr7_1:27277655-27277674 Msa1015230:CDS 45.0%
ATTCATTGTGCCATACCCAC+TGG + chr7_1:27277673-27277692 None:intergenic 45.0%
!!! TAAAATTTTATATTTTTTGT+AGG - chr7_1:27276029-27276048 Msa1015230:intron 5.0%
GTTGCAAGAGAACCATTGCG+GGG + chr7_1:27275129-27275148 None:intergenic 50.0%
GGTTGCAAGAGAACCATTGC+GGG + chr7_1:27275130-27275149 None:intergenic 50.0%
TGTTTGCACCCCTGTATGCA+GGG + chr7_1:27275309-27275328 None:intergenic 50.0%
GAAAACAGTGCAGGGAGAGA+TGG - chr7_1:27276128-27276147 Msa1015230:intron 50.0%
GAAGGATACATGGAGCGAAG+AGG - chr7_1:27277233-27277252 Msa1015230:CDS 50.0%
AGAACTCCATCAAGAACCGC+TGG - chr7_1:27277337-27277356 Msa1015230:CDS 50.0%
AGCATTCAGACTGCGCTTAG+TGG + chr7_1:27277367-27277386 None:intergenic 50.0%
!! ACTAGGACCAGGGTTGGTAT+TGG + chr7_1:27277538-27277557 None:intergenic 50.0%
AACATGACTAGGACCAGGGT+TGG + chr7_1:27277544-27277563 None:intergenic 50.0%
AACCCTGGTCCTAGTCATGT+TGG - chr7_1:27277543-27277562 Msa1015230:CDS 50.0%
GCTCCTGTGGAAGAAGATGT+TGG - chr7_1:27277609-27277628 Msa1015230:CDS 50.0%
GGTGATGAAGGAATGACCAG+TGG - chr7_1:27277654-27277673 Msa1015230:CDS 50.0%
GAAGGAATGACCAGTGGGTA+TGG - chr7_1:27277660-27277679 Msa1015230:CDS 50.0%
TGGGTTCGGATCGTATGGAA+TGG - chr7_1:27277695-27277714 Msa1015230:CDS 50.0%
TGATCCCAACCCCTGCATAC+AGG - chr7_1:27275296-27275315 Msa1015230:CDS 55.0%
GATCCCAACCCCTGCATACA+GGG - chr7_1:27275297-27275316 Msa1015230:CDS 55.0%
ATCCCAACCCCTGCATACAG+GGG - chr7_1:27275298-27275317 Msa1015230:CDS 55.0%
GTTTGCACCCCTGTATGCAG+GGG + chr7_1:27275308-27275327 None:intergenic 55.0%
GTGTTTGCACCCCTGTATGC+AGG + chr7_1:27275310-27275329 None:intergenic 55.0%
GGAGTTCCAGCGGTTCTTGA+TGG + chr7_1:27277346-27277365 None:intergenic 55.0%
TGCGCTTAGTGGAGTTCCAG+CGG + chr7_1:27277356-27277375 None:intergenic 55.0%
TGAAGGTTTCGCTGCTCCTG+TGG - chr7_1:27277596-27277615 Msa1015230:CDS 55.0%
CACCCCTGTATGCAGGGGTT+GGG + chr7_1:27275303-27275322 None:intergenic 60.0%
ATGGAGTTCTCAGTGCGCCC+AGG + chr7_1:27277327-27277346 None:intergenic 60.0%
GCACCCCTGTATGCAGGGGT+TGG + chr7_1:27275304-27275323 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 27275043 27277758 27275043 ID=Msa1015230;Name=Msa1015230
chr7_1 mRNA 27275043 27277758 27275043 ID=Msa1015230-mRNA-1;Parent=Msa1015230;Name=Msa1015230-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|482
chr7_1 exon 27276962 27277758 27276962 ID=Msa1015230-mRNA-1:exon:5800;Parent=Msa1015230-mRNA-1
chr7_1 exon 27276624 27276750 27276624 ID=Msa1015230-mRNA-1:exon:5799;Parent=Msa1015230-mRNA-1
chr7_1 exon 27275043 27275567 27275043 ID=Msa1015230-mRNA-1:exon:5798;Parent=Msa1015230-mRNA-1
chr7_1 CDS 27276962 27277758 27276962 ID=Msa1015230-mRNA-1:cds;Parent=Msa1015230-mRNA-1
chr7_1 CDS 27276624 27276750 27276624 ID=Msa1015230-mRNA-1:cds;Parent=Msa1015230-mRNA-1
chr7_1 CDS 27275043 27275567 27275043 ID=Msa1015230-mRNA-1:cds;Parent=Msa1015230-mRNA-1
Gene Sequence

>Msa1015230

ATGGAATTGGATCCTAGTTTTTCAGAAAAAATTTCTTATCTCTTAGGAGATTTTCCTAAAATTCCTCAAGAAAAATCAGAGATCCCCGCAATGGTTCTCTTGCAACCAAGTTCTACTATTTCACCTACACCATCACATTACACCAGTTTTTTGTACAATCAAAGCAGTCAATTCAATGAACATCCTCTGAACATGGCTAACCAAGACTTTAGGGTTTCTACTGTAGTTCCTTCATATATCAACGAATTTTCTATGATCCCAACCCCTGCATACAGGGGTGCAAACACCAATAGATCCCAGAGCGATTTTTTCAACGACCAAATTCCAATAACCTTTACACCAAACAATAACAAAAATGAATTTATGCATGAACACCTTAATACTGGCAAAGAAATTTGTGATTTTTCCCAACAAAATCTCTTTCAACATGGTCAAACTTCACAATCTCATTTCAGTCCCTCTCTATCAACATCAGTAGTTTATGAATGCCTTAATACTGACAAAGGAATTTGGGATTTCTCCCAACAAAATCTCTTTCAATATGGTGAAACTTCACAATCTCAGGTCAGTCCTTCTCTACCAACATCAGTAGTTTATGATGAAAACCCATCTTTGTTAGTGCCTAGGCTTCAAGCCAATATTTCTTGCATCGGTGGGTTTGAAAACAATACCCAACACAATGATGAAGGACTAATCCCCAACAACCAAAAGCGTCAAAAAAGGGTTGATAAGACTATTGATATTCAACAAAGGGATTTCAATACAAGCAAAAGGCTATGGACTTCAGATGAGGATAGGAATCTTGTCCAATTGGTGGAAAAATTTGGGCTCAATAACTGGGTAGAGATTGCTAAGTTTATGAATGGAAGAATCGGAAAACAGTGCAGGGAGAGATGGTACAACCATCTTCAACCGGACATTAAGAAGGATACATGGAGCGAAGAGGAAGACATATTATTGATCAAAGCTCACAAGATGATTGGGAACAAGTGGGCTGAAATTGCAAGTAGATTGCCTGGGCGCACTGAGAACTCCATCAAGAACCGCTGGAACTCCACTAAGCGCAGTCTGAATGCTACAAGTAGGCCAAACCGCCGAAATAGTTTGAGAGGAACATTACTTCATAATTACATTAGCGAAATCACCTATGCGGAGAATGTTCAAAAGGAGCTGACTAATTCCATGAACATAGTGCAGATTGCGAATCAGACAAATTTCAACATTACCAATACCAACCCTGGTCCTAGTCATGTTGGTTATGAAGTTGCAAACAATGGTTTTAGCTCTGAAGGTTTCGCTGCTCCTGTGGAAGAAGATGTTGGCTATGCAGCAATGATGCTCAACGGTGATGAAGGAATGACCAGTGGGTATGGCACAATGAATTATGGGTTCGGATCGTATGGAATGGAGTTTTTTCCTGAGTTTTTACCTCATGGAGATAATCTATAG
Protein sequence

>Msa1015230

MELDPSFSEKISYLLGDFPKIPQEKSEIPAMVLLQPSSTISPTPSHYTSFLYNQSSQFNEHPLNMANQDFRVSTVVPSYINEFSMIPTPAYRGANTNRSQSDFFNDQIPITFTPNNNKNEFMHEHLNTGKEICDFSQQNLFQHGQTSQSHFSPSLSTSVVYECLNTDKGIWDFSQQNLFQYGETSQSQVSPSLPTSVVYDENPSLLVPRLQANISCIGGFENNTQHNDEGLIPNNQKRQKRVDKTIDIQQRDFNTSKRLWTSDEDRNLVQLVEKFGLNNWVEIAKFMNGRIGKQCRERWYNHLQPDIKKDTWSEEEDILLIKAHKMIGNKWAEIASRLPGRTENSIKNRWNSTKRSLNATSRPNRRNSLRGTLLHNYISEITYAENVQKELTNSMNIVQIANQTNFNITNTNPGPSHVGYEVANNGFSSEGFAAPVEEDVGYAAMMLNGDEGMTSGYGTMNYGFGSYGMEFFPEFLPHGDNL*