Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1017090 | XP_013448347.2 | 88.745 | 542 | 54 | 2 | 1 | 538 | 1 | 539 | 0.0 | 985 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1017090 | sp|O82175|SUVH5_ARATH | 42.857 | 539 | 187 | 16 | 76 | 538 | 301 | 794 | 4.46e-117 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1017090 | A0A396H1J2 | 88.745 | 542 | 54 | 2 | 1 | 538 | 1 | 539 | 0.0 | 985 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1017090 | TR | SET |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1017090 | MtrunA17_Chr7g0232811 | 88.745 | 542 | 54 | 2 | 1 | 538 | 1 | 539 | 0.0 | 985 |
| Msa1017090 | MtrunA17_Chr7g0232841 | 86.004 | 543 | 56 | 5 | 1 | 538 | 1 | 528 | 0.0 | 912 |
| Msa1017090 | MtrunA17_Chr7g0232981 | 80.479 | 543 | 74 | 6 | 1 | 538 | 1 | 516 | 0.0 | 839 |
| Msa1017090 | MtrunA17_Chr7g0232861 | 85.537 | 242 | 33 | 1 | 7 | 248 | 3 | 242 | 1.15e-144 | 416 |
| Msa1017090 | MtrunA17_Chr7g0232761 | 75.269 | 279 | 48 | 3 | 1 | 263 | 1 | 274 | 5.91e-134 | 390 |
| Msa1017090 | MtrunA17_Chr5g0399801 | 44.216 | 536 | 203 | 12 | 77 | 538 | 576 | 1089 | 2.26e-129 | 404 |
| Msa1017090 | MtrunA17_Chr4g0003511 | 42.293 | 532 | 216 | 11 | 78 | 538 | 541 | 1052 | 1.47e-121 | 382 |
| Msa1017090 | MtrunA17_Chr4g0003501 | 41.682 | 535 | 215 | 12 | 77 | 538 | 445 | 955 | 2.39e-118 | 371 |
| Msa1017090 | MtrunA17_Chr7g0232751 | 92.437 | 119 | 9 | 0 | 420 | 538 | 1 | 119 | 6.26e-76 | 235 |
| Msa1017090 | MtrunA17_Chr1g0170651 | 31.876 | 549 | 235 | 15 | 81 | 538 | 46 | 546 | 3.22e-69 | 233 |
| Msa1017090 | MtrunA17_Chr3g0080761 | 31.376 | 545 | 263 | 17 | 78 | 533 | 137 | 659 | 1.71e-66 | 227 |
| Msa1017090 | MtrunA17_Chr7g0232871 | 90.909 | 110 | 10 | 0 | 329 | 438 | 1 | 110 | 1.78e-64 | 205 |
| Msa1017090 | MtrunA17_Chr8g0354821 | 31.455 | 550 | 263 | 22 | 73 | 533 | 159 | 683 | 3.84e-63 | 219 |
| Msa1017090 | MtrunA17_Chr7g0252211 | 32.422 | 512 | 242 | 15 | 116 | 538 | 261 | 757 | 1.99e-62 | 218 |
| Msa1017090 | MtrunA17_Chr8g0368911 | 31.712 | 473 | 231 | 15 | 110 | 507 | 293 | 748 | 2.96e-61 | 215 |
| Msa1017090 | MtrunA17_Chr6g0476111 | 32.869 | 502 | 236 | 16 | 121 | 538 | 210 | 694 | 8.13e-61 | 213 |
| Msa1017090 | MtrunA17_Chr6g0476121 | 32.554 | 513 | 245 | 15 | 110 | 538 | 148 | 643 | 3.61e-60 | 210 |
| Msa1017090 | MtrunA17_Chr8g0368901 | 31.092 | 476 | 230 | 15 | 110 | 507 | 300 | 755 | 2.75e-59 | 209 |
| Msa1017090 | MtrunA17_Chr7g0255181 | 31.599 | 538 | 248 | 21 | 79 | 533 | 200 | 700 | 8.71e-59 | 207 |
| Msa1017090 | MtrunA17_Chr8g0369301 | 31.368 | 475 | 230 | 14 | 110 | 507 | 280 | 735 | 2.46e-57 | 204 |
| Msa1017090 | MtrunA17_Chr1g0163051 | 30.126 | 478 | 243 | 14 | 110 | 514 | 192 | 651 | 1.53e-54 | 195 |
| Msa1017090 | MtrunA17_Chr6g0467421 | 28.480 | 467 | 243 | 15 | 113 | 507 | 115 | 562 | 5.47e-52 | 186 |
| Msa1017090 | MtrunA17_Chr6g0467381 | 28.694 | 467 | 242 | 15 | 113 | 507 | 115 | 562 | 1.16e-51 | 185 |
| Msa1017090 | MtrunA17_Chr6g0467531 | 28.694 | 467 | 242 | 15 | 113 | 507 | 115 | 562 | 3.39e-51 | 184 |
| Msa1017090 | MtrunA17_Chr6g0467401 | 28.480 | 467 | 243 | 15 | 113 | 507 | 115 | 562 | 1.12e-49 | 179 |
| Msa1017090 | MtrunA17_Chr3g0094881 | 27.644 | 539 | 268 | 20 | 72 | 526 | 138 | 638 | 3.48e-47 | 174 |
| Msa1017090 | MtrunA17_Chr6g0467411 | 28.027 | 446 | 251 | 16 | 113 | 507 | 54 | 480 | 1.76e-44 | 164 |
| Msa1017090 | MtrunA17_Chr1g0163041 | 28.690 | 481 | 250 | 14 | 110 | 515 | 109 | 571 | 1.12e-41 | 157 |
| Msa1017090 | MtrunA17_Chr2g0306961 | 27.045 | 440 | 234 | 15 | 113 | 507 | 64 | 461 | 2.08e-36 | 141 |
| Msa1017090 | MtrunA17_Chr4g0075321 | 36.500 | 200 | 87 | 5 | 343 | 538 | 901 | 1064 | 1.72e-29 | 123 |
| Msa1017090 | MtrunA17_Chr5g0403241 | 35.354 | 198 | 92 | 5 | 343 | 538 | 1344 | 1507 | 5.96e-28 | 119 |
| Msa1017090 | MtrunA17_Chr8g0373821 | 35.071 | 211 | 95 | 7 | 328 | 533 | 360 | 533 | 2.50e-26 | 112 |
| Msa1017090 | MtrunA17_Chr1g0190311 | 32.057 | 209 | 109 | 8 | 330 | 536 | 465 | 642 | 3.07e-17 | 85.1 |
| Msa1017090 | MtrunA17_Chr1g0183321 | 30.000 | 210 | 105 | 7 | 330 | 533 | 568 | 741 | 9.17e-16 | 80.5 |
| Msa1017090 | MtrunA17_Chr6g0460921 | 25.229 | 218 | 125 | 9 | 321 | 537 | 239 | 419 | 2.45e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1017090 | AT2G35160.5 | 42.831 | 537 | 190 | 15 | 76 | 538 | 265 | 758 | 2.13e-118 | 367 |
| Msa1017090 | AT2G35160.2 | 42.857 | 539 | 187 | 16 | 76 | 538 | 301 | 794 | 4.54e-118 | 367 |
| Msa1017090 | AT2G35160.3 | 42.857 | 539 | 187 | 16 | 76 | 538 | 301 | 794 | 4.54e-118 | 367 |
| Msa1017090 | AT2G35160.1 | 42.857 | 539 | 187 | 16 | 76 | 538 | 301 | 794 | 4.54e-118 | 367 |
| Msa1017090 | AT2G35160.4 | 42.857 | 539 | 187 | 16 | 76 | 538 | 301 | 794 | 4.54e-118 | 367 |
| Msa1017090 | AT2G22740.2 | 40.706 | 538 | 221 | 15 | 82 | 538 | 270 | 790 | 2.69e-111 | 349 |
| Msa1017090 | AT2G22740.1 | 40.706 | 538 | 221 | 15 | 82 | 538 | 270 | 790 | 2.69e-111 | 349 |
| Msa1017090 | AT5G13960.2 | 32.669 | 502 | 242 | 14 | 119 | 538 | 3 | 490 | 8.34e-61 | 208 |
| Msa1017090 | AT5G13960.1 | 32.669 | 502 | 242 | 14 | 119 | 538 | 137 | 624 | 1.48e-60 | 211 |
| Msa1017090 | AT1G73100.1 | 30.600 | 500 | 248 | 15 | 113 | 533 | 185 | 664 | 1.46e-59 | 209 |
| Msa1017090 | AT5G04940.2 | 31.622 | 487 | 229 | 18 | 125 | 533 | 205 | 665 | 9.74e-58 | 204 |
| Msa1017090 | AT5G04940.1 | 31.622 | 487 | 229 | 18 | 125 | 533 | 205 | 665 | 9.74e-58 | 204 |
| Msa1017090 | AT2G33290.1 | 28.596 | 577 | 302 | 17 | 22 | 521 | 104 | 647 | 1.45e-51 | 187 |
| Msa1017090 | AT2G33290.3 | 28.596 | 577 | 302 | 17 | 22 | 521 | 104 | 647 | 1.45e-51 | 187 |
| Msa1017090 | AT2G33290.4 | 28.596 | 577 | 302 | 17 | 22 | 521 | 104 | 647 | 1.45e-51 | 187 |
| Msa1017090 | AT2G33290.2 | 28.596 | 577 | 302 | 17 | 22 | 521 | 104 | 647 | 1.45e-51 | 187 |
| Msa1017090 | AT4G13460.1 | 29.026 | 503 | 260 | 14 | 97 | 526 | 171 | 649 | 1.75e-49 | 181 |
| Msa1017090 | AT4G13460.2 | 29.026 | 503 | 260 | 14 | 97 | 526 | 171 | 649 | 1.75e-49 | 181 |
| Msa1017090 | AT2G24740.1 | 29.375 | 480 | 235 | 16 | 125 | 533 | 304 | 750 | 2.64e-44 | 167 |
| Msa1017090 | AT1G17770.1 | 27.510 | 498 | 242 | 18 | 125 | 533 | 221 | 688 | 2.12e-42 | 161 |
| Msa1017090 | AT5G47150.1 | 38.991 | 218 | 104 | 7 | 78 | 273 | 114 | 324 | 7.92e-28 | 114 |
| Msa1017090 | AT5G47160.1 | 33.101 | 287 | 162 | 7 | 5 | 269 | 129 | 407 | 1.23e-26 | 112 |
| Msa1017090 | AT5G47160.3 | 33.101 | 287 | 162 | 7 | 5 | 269 | 129 | 407 | 1.23e-26 | 112 |
| Msa1017090 | AT5G47160.2 | 33.101 | 287 | 162 | 7 | 5 | 269 | 129 | 407 | 1.23e-26 | 112 |
| Msa1017090 | AT2G23740.1 | 32.143 | 196 | 94 | 4 | 343 | 533 | 1209 | 1370 | 3.72e-23 | 104 |
| Msa1017090 | AT2G23740.3 | 32.143 | 196 | 94 | 4 | 343 | 533 | 1216 | 1377 | 3.82e-23 | 104 |
| Msa1017090 | AT2G23740.6 | 32.143 | 196 | 94 | 4 | 343 | 533 | 1216 | 1377 | 3.82e-23 | 104 |
| Msa1017090 | AT2G23740.2 | 32.143 | 196 | 94 | 4 | 343 | 533 | 1216 | 1377 | 3.82e-23 | 104 |
| Msa1017090 | AT3G04380.1 | 31.579 | 209 | 109 | 8 | 330 | 536 | 284 | 460 | 5.18e-17 | 84.3 |
| Msa1017090 | AT3G04380.6 | 31.579 | 209 | 109 | 8 | 330 | 536 | 257 | 433 | 5.22e-17 | 84.0 |
| Msa1017090 | AT3G04380.5 | 31.579 | 209 | 109 | 8 | 330 | 536 | 241 | 417 | 5.31e-17 | 84.0 |
| Msa1017090 | AT3G04380.2 | 31.579 | 209 | 109 | 8 | 330 | 536 | 257 | 433 | 5.53e-17 | 84.0 |
| Msa1017090 | AT3G04380.4 | 31.579 | 209 | 109 | 8 | 330 | 536 | 284 | 460 | 5.80e-17 | 84.3 |
| Msa1017090 | AT3G04380.3 | 31.579 | 209 | 109 | 8 | 330 | 536 | 268 | 444 | 6.13e-17 | 84.0 |
| Msa1017090 | AT1G04050.3 | 28.155 | 206 | 111 | 7 | 330 | 533 | 444 | 614 | 5.64e-13 | 72.0 |
| Msa1017090 | AT1G04050.2 | 28.155 | 206 | 111 | 7 | 330 | 533 | 548 | 718 | 5.85e-13 | 72.0 |
| Msa1017090 | AT1G04050.1 | 28.155 | 206 | 111 | 7 | 330 | 533 | 548 | 718 | 5.85e-13 | 72.0 |
| Msa1017090 | AT2G23740.4 | 32.558 | 129 | 52 | 3 | 343 | 466 | 1216 | 1314 | 8.97e-13 | 72.0 |
| Msa1017090 | AT2G23740.5 | 32.558 | 129 | 52 | 3 | 343 | 466 | 1216 | 1314 | 8.97e-13 | 72.0 |
| Msa1017090 | AT1G76710.3 | 32.065 | 184 | 74 | 9 | 352 | 533 | 90 | 224 | 4.98e-12 | 68.9 |
| Msa1017090 | AT1G76710.2 | 32.065 | 184 | 74 | 9 | 352 | 533 | 90 | 224 | 5.08e-12 | 68.6 |
| Msa1017090 | AT1G76710.1 | 32.065 | 184 | 74 | 9 | 352 | 533 | 90 | 224 | 5.08e-12 | 68.6 |
| Msa1017090 | AT2G05900.1 | 27.363 | 201 | 104 | 7 | 148 | 311 | 1 | 196 | 5.36e-12 | 67.4 |
| Msa1017090 | AT1G76710.4 | 32.065 | 184 | 74 | 9 | 352 | 533 | 90 | 224 | 6.35e-12 | 68.6 |
Find 94 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATAAAGTCGAATCTATT+TGG | 0.122230 | 7_1:-35511141 | Msa1017090:CDS |
| TTTACCACTTGAAGCTTCTA+AGG | 0.221245 | 7_1:+35510592 | None:intergenic |
| GATGAGTATTTATTTAATAT+TGG | 0.247972 | 7_1:-35510695 | Msa1017090:CDS |
| AACATTTCGAGCAAACAAAT+TGG | 0.261209 | 7_1:+35510475 | None:intergenic |
| AACTTTATAATAACTCTAAT+AGG | 0.276626 | 7_1:+35511226 | None:intergenic |
| TTTCTTGATTGGTGTTTCAT+TGG | 0.287334 | 7_1:+35511735 | None:intergenic |
| GGAGGTAATGTCATTAATTC+TGG | 0.290555 | 7_1:-35511301 | Msa1017090:CDS |
| CGAGTAATGTATTGAAAATA+TGG | 0.296319 | 7_1:+35510983 | None:intergenic |
| ACAATTGATGCTGCTAAGTA+TGG | 0.305938 | 7_1:-35510533 | Msa1017090:CDS |
| TCAGAGAATGCAATTGCTTC+TGG | 0.309438 | 7_1:-35510785 | Msa1017090:CDS |
| TTATAAAGTCGAATCTATTT+GGG | 0.319297 | 7_1:-35511140 | Msa1017090:CDS |
| AATTCTGGAGAATGTGATAA+AGG | 0.344872 | 7_1:-35511286 | Msa1017090:CDS |
| GAATCTTCGAAAAGCCATTC+AGG | 0.347836 | 7_1:+35510950 | None:intergenic |
| ACAAAAGTGTTCGTTTATAC+AGG | 0.350376 | 7_1:-35511328 | Msa1017090:CDS |
| TCTCATTGATTACGTGATAA+AGG | 0.363505 | 7_1:-35511407 | Msa1017090:CDS |
| TTTAAATGCAGTTTCTTGAT+TGG | 0.364503 | 7_1:+35511724 | None:intergenic |
| CTCGTAACATTTATCCTGAA+TGG | 0.372209 | 7_1:-35510964 | Msa1017090:CDS |
| TTGTCACCTACTTCAATTCC+AGG | 0.384331 | 7_1:+35511484 | None:intergenic |
| AGGTGAGATAATTGAAGATC+AGG | 0.385083 | 7_1:-35510741 | Msa1017090:CDS |
| CTTGAAATGATTTGTGTTGT+GGG | 0.398982 | 7_1:+35511848 | None:intergenic |
| TTCATATATGGTTGATAGTA+AGG | 0.403159 | 7_1:-35510633 | Msa1017090:CDS |
| ATTATATTCACAAGGTCTAT+AGG | 0.407539 | 7_1:-35510670 | Msa1017090:CDS |
| GTGGTTAATCGTATAGATTC+TGG | 0.413281 | 7_1:-35511013 | Msa1017090:CDS |
| GGTGGTGGTGCACGTGGTGG+AGG | 0.414640 | 7_1:-35511187 | Msa1017090:CDS |
| AGAATCCGTGACACTTTGAT+AGG | 0.423926 | 7_1:+35511559 | None:intergenic |
| TCTTTCAGTAAAGTTCCTAT+TGG | 0.426830 | 7_1:+35511822 | None:intergenic |
| ACAAATTGGGAGAACAACTA+TGG | 0.427505 | 7_1:+35510489 | None:intergenic |
| GGTGAGGTGTATTGTTACTA+TGG | 0.435582 | 7_1:-35511166 | Msa1017090:CDS |
| GATCAAGTTATTGATTCAAA+TGG | 0.437105 | 7_1:-35510350 | Msa1017090:CDS |
| AATCATTTCAAGTCGCCAAT+AGG | 0.448611 | 7_1:-35511837 | Msa1017090:CDS |
| ACATTTCGAGCAAACAAATT+GGG | 0.449844 | 7_1:+35510476 | None:intergenic |
| GTGGGAAGAGGATTCATATA+TGG | 0.450043 | 7_1:-35510645 | Msa1017090:CDS |
| ATACGATTAACCACACATAT+AGG | 0.451047 | 7_1:+35511022 | None:intergenic |
| GGTCTATAGGTCGTGGGAAG+AGG | 0.454401 | 7_1:-35510657 | Msa1017090:CDS |
| ATTCTGGAGAATGTGATAAA+GGG | 0.456300 | 7_1:-35511285 | Msa1017090:CDS |
| CCCTCCACTCTTAAGAGCAC+AGG | 0.461039 | 7_1:+35510889 | None:intergenic |
| TGGCAAGAACTCAACGTTGT+TGG | 0.468798 | 7_1:-35511451 | Msa1017090:CDS |
| ACTTGAAATGATTTGTGTTG+TGG | 0.470556 | 7_1:+35511847 | None:intergenic |
| TTTGTGTTGTGGGTTGGTAG+TGG | 0.483000 | 7_1:+35511858 | None:intergenic |
| GAGGAAAATTCATTCACAAT+GGG | 0.486380 | 7_1:-35511528 | Msa1017090:CDS |
| TTTCTTTCTTCTTGAGTCAT+CGG | 0.493504 | 7_1:+35511654 | None:intergenic |
| AAAATTATTGGAAATGTCCC+TGG | 0.496911 | 7_1:-35511502 | Msa1017090:CDS |
| TTCACAAGGTCTATAGGTCG+TGG | 0.504274 | 7_1:-35510664 | Msa1017090:CDS |
| AAGACGAAAGTATGTTATTG+TGG | 0.504531 | 7_1:-35510320 | Msa1017090:CDS |
| CAAGACTAAGGCGAAAGGAT+GGG | 0.513493 | 7_1:-35510816 | Msa1017090:CDS |
| CGTGCTCTCTGTGGAAAACT+CGG | 0.520054 | 7_1:-35511607 | Msa1017090:CDS |
| ATAAAGTTTAATTCAAAGAA+CGG | 0.520311 | 7_1:-35511211 | Msa1017090:CDS |
| AAATGATTTGTGTTGTGGGT+TGG | 0.522717 | 7_1:+35511852 | None:intergenic |
| TAGGTGACAAGTTTCAGTAT+TGG | 0.528561 | 7_1:-35511471 | Msa1017090:CDS |
| TCAAGACTAAGGCGAAAGGA+TGG | 0.530216 | 7_1:-35510817 | Msa1017090:CDS |
| GCCTGTGCTCTTAAGAGTGG+AGG | 0.530694 | 7_1:-35510890 | Msa1017090:CDS |
| CAAAAGTGTTCGTTTATACA+GGG | 0.533398 | 7_1:-35511327 | Msa1017090:CDS |
| AAGACTAAGGCGAAAGGATG+GGG | 0.542189 | 7_1:-35510815 | Msa1017090:CDS |
| TTACCACTTGAAGCTTCTAA+GGG | 0.542917 | 7_1:+35510593 | None:intergenic |
| AATTCAAAGAACGGTGGTGG+TGG | 0.550993 | 7_1:-35511202 | Msa1017090:CDS |
| GTTGATGATCGATGTGATAG+TGG | 0.551003 | 7_1:-35510563 | Msa1017090:CDS |
| GGTGGTGGTGGTGCACGTGG+TGG | 0.552190 | 7_1:-35511190 | Msa1017090:CDS |
| AGAAGCTTCAAGTGGTAAAG+AGG | 0.552219 | 7_1:-35510588 | Msa1017090:CDS |
| TTTGTTATAGATATTTCCAA+TGG | 0.556582 | 7_1:-35511058 | Msa1017090:CDS |
| AGAGGAAAATTCATTCACAA+TGG | 0.557077 | 7_1:-35511529 | Msa1017090:CDS |
| TTTAATTCAAAGAACGGTGG+TGG | 0.569178 | 7_1:-35511205 | Msa1017090:CDS |
| AACGGTGGTGGTGGTGCACG+TGG | 0.573546 | 7_1:-35511193 | Msa1017090:CDS |
| TTTGCCTGTGCTCTTAAGAG+TGG | 0.575325 | 7_1:-35510893 | Msa1017090:CDS |
| TGGTGCACGTGGTGGAGGTG+AGG | 0.581579 | 7_1:-35511182 | Msa1017090:CDS |
| CCTGTGCTCTTAAGAGTGGA+GGG | 0.588175 | 7_1:-35510889 | Msa1017090:CDS |
| CACAATGAGAGTATTGTCAA+AGG | 0.593914 | 7_1:-35511776 | Msa1017090:CDS |
| TCTCTGTGGAAAACTCGGTA+AGG | 0.594265 | 7_1:-35511602 | Msa1017090:CDS |
| ATGATCGATGTGATAGTGGT+AGG | 0.595335 | 7_1:-35510559 | Msa1017090:CDS |
| AAAGTCAGCTCATTCATGCT+CGG | 0.596521 | 7_1:+35510392 | None:intergenic |
| TTTACAATGATGATGATCTG+AGG | 0.599652 | 7_1:-35510451 | Msa1017090:CDS |
| GTGTTCGTTTATACAGGGGA+AGG | 0.599990 | 7_1:-35511322 | Msa1017090:CDS |
| AATCTCATCAATACAGTCGA+CGG | 0.610597 | 7_1:+35510282 | None:intergenic |
| TTCGTTTATACAGGGGAAGG+AGG | 0.611584 | 7_1:-35511319 | Msa1017090:CDS |
| CTAAGTATGGTAATGTGGCA+AGG | 0.612015 | 7_1:-35510520 | Msa1017090:CDS |
| TATTGGCAATTATATTCACA+AGG | 0.615507 | 7_1:-35510678 | Msa1017090:CDS |
| TCACAAGGTCTATAGGTCGT+GGG | 0.621148 | 7_1:-35510663 | Msa1017090:CDS |
| AATGTCCCTGGAATTGAAGT+AGG | 0.621360 | 7_1:-35511490 | Msa1017090:CDS |
| CACTTTGATAGGAAGCGCGT+CGG | 0.622846 | 7_1:+35511570 | None:intergenic |
| GGTAACTTCCGTGCTCTCTG+TGG | 0.631604 | 7_1:-35511616 | Msa1017090:CDS |
| CGCTTCCTATCAAAGTGTCA+CGG | 0.631675 | 7_1:-35511564 | Msa1017090:CDS |
| TAATCGTATAGATTCTGGCA+AGG | 0.632162 | 7_1:-35511008 | Msa1017090:CDS |
| TGGGTTGGTAGTGGAAGACG+AGG | 0.634379 | 7_1:+35511867 | None:intergenic |
| TGTCACCTACTTCAATTCCA+GGG | 0.640833 | 7_1:+35511485 | None:intergenic |
| CAACCCTTAGAAGCTTCAAG+TGG | 0.647600 | 7_1:-35510596 | Msa1017090:CDS |
| TCACGGATTCTCAAAAGCAG+AGG | 0.651254 | 7_1:-35511547 | Msa1017090:CDS |
| GAGTCATCGGAAGTCAAAGA+CGG | 0.651653 | 7_1:+35511667 | None:intergenic |
| AGAACATTTACGCCCAACAG+AGG | 0.655904 | 7_1:+35510928 | None:intergenic |
| ACTATCACATCGATCATCAA+CGG | 0.657622 | 7_1:+35510565 | None:intergenic |
| AAAAGTGTTCGTTTATACAG+GGG | 0.661822 | 7_1:-35511326 | Msa1017090:CDS |
| AGAAGCTGTTCCTATATGTG+TGG | 0.665038 | 7_1:-35511032 | Msa1017090:CDS |
| TGCTGCTAAGTATGGTAATG+TGG | 0.666308 | 7_1:-35510525 | Msa1017090:CDS |
| AAGTTTAATTCAAAGAACGG+TGG | 0.694907 | 7_1:-35511208 | Msa1017090:CDS |
| GCTGCATATAGCATGATGTG+TGG | 0.717627 | 7_1:+35510425 | None:intergenic |
| GGGTTGGTAGTGGAAGACGA+GGG | 0.736975 | 7_1:+35511868 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAGATTTTAAATTTTGTT+TGG | - | chr7_1:35511068-35511087 | Msa1017090:CDS | 10.0% |
| !!! | ATTAGATTTTAAATTTTGTT+TGG | - | chr7_1:35511068-35511087 | Msa1017090:CDS | 10.0% |
| !! | AACTTTATAATAACTCTAAT+AGG | + | chr7_1:35510949-35510968 | None:intergenic | 15.0% |
| !! | ATAAAGTTTAATTCAAAGAA+CGG | - | chr7_1:35510961-35510980 | Msa1017090:CDS | 15.0% |
| !! | GATGAGTATTTATTTAATAT+TGG | - | chr7_1:35511477-35511496 | Msa1017090:CDS | 15.0% |
| !! | AACTTTATAATAACTCTAAT+AGG | + | chr7_1:35510949-35510968 | None:intergenic | 15.0% |
| !! | ATAAAGTTTAATTCAAAGAA+CGG | - | chr7_1:35510961-35510980 | Msa1017090:CDS | 15.0% |
| !! | GATGAGTATTTATTTAATAT+TGG | - | chr7_1:35511477-35511496 | Msa1017090:CDS | 15.0% |
| !! | AAGAAAGTAAAAACTACATT+AGG | - | chr7_1:35510535-35510554 | Msa1017090:CDS | 20.0% |
| !! | TTTATAAAGTCGAATCTATT+TGG | - | chr7_1:35511031-35511050 | Msa1017090:CDS | 20.0% |
| !! | TTATAAAGTCGAATCTATTT+GGG | - | chr7_1:35511032-35511051 | Msa1017090:CDS | 20.0% |
| !! | AATCTATTTGGGAAAAAAAA+GGG | - | chr7_1:35511043-35511062 | Msa1017090:CDS | 20.0% |
| !! | ATAACAAAAAATTTCTGATC+AGG | + | chr7_1:35511102-35511121 | None:intergenic | 20.0% |
| !!! | TTTGTTATAGATATTTCCAA+TGG | - | chr7_1:35511114-35511133 | Msa1017090:CDS | 20.0% |
| !!! | AGTTTTATTTGTGAGTATTT+AGG | - | chr7_1:35511411-35511430 | Msa1017090:CDS | 20.0% |
| !! | AAGAAAGTAAAAACTACATT+AGG | - | chr7_1:35510535-35510554 | Msa1017090:CDS | 20.0% |
| !! | TTTATAAAGTCGAATCTATT+TGG | - | chr7_1:35511031-35511050 | Msa1017090:CDS | 20.0% |
| !! | TTATAAAGTCGAATCTATTT+GGG | - | chr7_1:35511032-35511051 | Msa1017090:CDS | 20.0% |
| !! | AATCTATTTGGGAAAAAAAA+GGG | - | chr7_1:35511043-35511062 | Msa1017090:CDS | 20.0% |
| !! | ATAACAAAAAATTTCTGATC+AGG | + | chr7_1:35511102-35511121 | None:intergenic | 20.0% |
| !!! | TTTGTTATAGATATTTCCAA+TGG | - | chr7_1:35511114-35511133 | Msa1017090:CDS | 20.0% |
| !!! | AGTTTTATTTGTGAGTATTT+AGG | - | chr7_1:35511411-35511430 | Msa1017090:CDS | 20.0% |
| ! | TTTAAATGCAGTTTCTTGAT+TGG | + | chr7_1:35510451-35510470 | None:intergenic | 25.0% |
| ! | CACAATGGGAAAAAAATTAT+TGG | - | chr7_1:35510658-35510677 | Msa1017090:CDS | 25.0% |
| !!! | TTCTTGTCATTTTGATGATA+TGG | - | chr7_1:35510816-35510835 | Msa1017090:CDS | 25.0% |
| ! | GAATCTATTTGGGAAAAAAA+AGG | - | chr7_1:35511042-35511061 | Msa1017090:CDS | 25.0% |
| ! | CGAGTAATGTATTGAAAATA+TGG | + | chr7_1:35511192-35511211 | None:intergenic | 25.0% |
| !!! | ATCTCATTTTTCTTTACTCT+AGG | + | chr7_1:35511315-35511334 | None:intergenic | 25.0% |
| ! | TATTGGCAATTATATTCACA+AGG | - | chr7_1:35511494-35511513 | Msa1017090:CDS | 25.0% |
| ! | ATTATATTCACAAGGTCTAT+AGG | - | chr7_1:35511502-35511521 | Msa1017090:CDS | 25.0% |
| !!! | TTCATATATGGTTGATAGTA+AGG | - | chr7_1:35511539-35511558 | Msa1017090:CDS | 25.0% |
| !!! | GATCAAGTTATTGATTCAAA+TGG | - | chr7_1:35511822-35511841 | Msa1017090:CDS | 25.0% |
| ! | TTTAAATGCAGTTTCTTGAT+TGG | + | chr7_1:35510451-35510470 | None:intergenic | 25.0% |
| ! | CACAATGGGAAAAAAATTAT+TGG | - | chr7_1:35510658-35510677 | Msa1017090:CDS | 25.0% |
| !!! | TTCTTGTCATTTTGATGATA+TGG | - | chr7_1:35510816-35510835 | Msa1017090:CDS | 25.0% |
| ! | GAATCTATTTGGGAAAAAAA+AGG | - | chr7_1:35511042-35511061 | Msa1017090:CDS | 25.0% |
| ! | CGAGTAATGTATTGAAAATA+TGG | + | chr7_1:35511192-35511211 | None:intergenic | 25.0% |
| !!! | ATCTCATTTTTCTTTACTCT+AGG | + | chr7_1:35511315-35511334 | None:intergenic | 25.0% |
| ! | TATTGGCAATTATATTCACA+AGG | - | chr7_1:35511494-35511513 | Msa1017090:CDS | 25.0% |
| ! | ATTATATTCACAAGGTCTAT+AGG | - | chr7_1:35511502-35511521 | Msa1017090:CDS | 25.0% |
| !!! | TTCATATATGGTTGATAGTA+AGG | - | chr7_1:35511539-35511558 | Msa1017090:CDS | 25.0% |
| !!! | GATCAAGTTATTGATTCAAA+TGG | - | chr7_1:35511822-35511841 | Msa1017090:CDS | 25.0% |
| ! | CTTGAAATGATTTGTGTTGT+GGG | + | chr7_1:35510327-35510346 | None:intergenic | 30.0% |
| ! | ACTTGAAATGATTTGTGTTG+TGG | + | chr7_1:35510328-35510347 | None:intergenic | 30.0% |
| TCTTTCAGTAAAGTTCCTAT+TGG | + | chr7_1:35510353-35510372 | None:intergenic | 30.0% | |
| ! | TTTCTTGATTGGTGTTTCAT+TGG | + | chr7_1:35510440-35510459 | None:intergenic | 30.0% |
| TTTCTTTCTTCTTGAGTCAT+CGG | + | chr7_1:35510521-35510540 | None:intergenic | 30.0% | |
| AGAGGAAAATTCATTCACAA+TGG | - | chr7_1:35510643-35510662 | Msa1017090:CDS | 30.0% | |
| GAGGAAAATTCATTCACAAT+GGG | - | chr7_1:35510644-35510663 | Msa1017090:CDS | 30.0% | |
| AAAATTATTGGAAATGTCCC+TGG | - | chr7_1:35510670-35510689 | Msa1017090:CDS | 30.0% | |
| ! | TCTCATTGATTACGTGATAA+AGG | - | chr7_1:35510765-35510784 | Msa1017090:CDS | 30.0% |
| !! | ACAAAAGTGTTCGTTTATAC+AGG | - | chr7_1:35510844-35510863 | Msa1017090:CDS | 30.0% |
| !! | CAAAAGTGTTCGTTTATACA+GGG | - | chr7_1:35510845-35510864 | Msa1017090:CDS | 30.0% |
| !! | AAAAGTGTTCGTTTATACAG+GGG | - | chr7_1:35510846-35510865 | Msa1017090:CDS | 30.0% |
| ! | AATTCTGGAGAATGTGATAA+AGG | - | chr7_1:35510886-35510905 | Msa1017090:CDS | 30.0% |
| ! | ATTCTGGAGAATGTGATAAA+GGG | - | chr7_1:35510887-35510906 | Msa1017090:CDS | 30.0% |
| AAGTTTAATTCAAAGAACGG+TGG | - | chr7_1:35510964-35510983 | Msa1017090:CDS | 30.0% | |
| ATACGATTAACCACACATAT+AGG | + | chr7_1:35511153-35511172 | None:intergenic | 30.0% | |
| !! | GCTTCAAATTTTCAAGACTA+AGG | - | chr7_1:35511344-35511363 | Msa1017090:CDS | 30.0% |
| ACATTTCGAGCAAACAAATT+GGG | + | chr7_1:35511699-35511718 | None:intergenic | 30.0% | |
| AACATTTCGAGCAAACAAAT+TGG | + | chr7_1:35511700-35511719 | None:intergenic | 30.0% | |
| ! | TTTACAATGATGATGATCTG+AGG | - | chr7_1:35511721-35511740 | Msa1017090:CDS | 30.0% |
| ! | AAGACGAAAGTATGTTATTG+TGG | - | chr7_1:35511852-35511871 | Msa1017090:CDS | 30.0% |
| ! | CTTGAAATGATTTGTGTTGT+GGG | + | chr7_1:35510327-35510346 | None:intergenic | 30.0% |
| ! | ACTTGAAATGATTTGTGTTG+TGG | + | chr7_1:35510328-35510347 | None:intergenic | 30.0% |
| TCTTTCAGTAAAGTTCCTAT+TGG | + | chr7_1:35510353-35510372 | None:intergenic | 30.0% | |
| ! | TTTCTTGATTGGTGTTTCAT+TGG | + | chr7_1:35510440-35510459 | None:intergenic | 30.0% |
| TTTCTTTCTTCTTGAGTCAT+CGG | + | chr7_1:35510521-35510540 | None:intergenic | 30.0% | |
| AGAGGAAAATTCATTCACAA+TGG | - | chr7_1:35510643-35510662 | Msa1017090:CDS | 30.0% | |
| GAGGAAAATTCATTCACAAT+GGG | - | chr7_1:35510644-35510663 | Msa1017090:CDS | 30.0% | |
| AAAATTATTGGAAATGTCCC+TGG | - | chr7_1:35510670-35510689 | Msa1017090:CDS | 30.0% | |
| ! | TCTCATTGATTACGTGATAA+AGG | - | chr7_1:35510765-35510784 | Msa1017090:CDS | 30.0% |
| !! | ACAAAAGTGTTCGTTTATAC+AGG | - | chr7_1:35510844-35510863 | Msa1017090:CDS | 30.0% |
| !! | CAAAAGTGTTCGTTTATACA+GGG | - | chr7_1:35510845-35510864 | Msa1017090:CDS | 30.0% |
| !! | AAAAGTGTTCGTTTATACAG+GGG | - | chr7_1:35510846-35510865 | Msa1017090:CDS | 30.0% |
| ! | AATTCTGGAGAATGTGATAA+AGG | - | chr7_1:35510886-35510905 | Msa1017090:CDS | 30.0% |
| ! | ATTCTGGAGAATGTGATAAA+GGG | - | chr7_1:35510887-35510906 | Msa1017090:CDS | 30.0% |
| AAGTTTAATTCAAAGAACGG+TGG | - | chr7_1:35510964-35510983 | Msa1017090:CDS | 30.0% | |
| ATACGATTAACCACACATAT+AGG | + | chr7_1:35511153-35511172 | None:intergenic | 30.0% | |
| !! | GCTTCAAATTTTCAAGACTA+AGG | - | chr7_1:35511344-35511363 | Msa1017090:CDS | 30.0% |
| ACATTTCGAGCAAACAAATT+GGG | + | chr7_1:35511699-35511718 | None:intergenic | 30.0% | |
| AACATTTCGAGCAAACAAAT+TGG | + | chr7_1:35511700-35511719 | None:intergenic | 30.0% | |
| ! | TTTACAATGATGATGATCTG+AGG | - | chr7_1:35511721-35511740 | Msa1017090:CDS | 30.0% |
| ! | AAGACGAAAGTATGTTATTG+TGG | - | chr7_1:35511852-35511871 | Msa1017090:CDS | 30.0% |
| ! | AAATGATTTGTGTTGTGGGT+TGG | + | chr7_1:35510323-35510342 | None:intergenic | 35.0% |
| ! | AATCATTTCAAGTCGCCAAT+AGG | - | chr7_1:35510335-35510354 | Msa1017090:CDS | 35.0% |
| !! | CACAATGAGAGTATTGTCAA+AGG | - | chr7_1:35510396-35510415 | Msa1017090:CDS | 35.0% |
| TAGGTGACAAGTTTCAGTAT+TGG | - | chr7_1:35510701-35510720 | Msa1017090:CDS | 35.0% | |
| GGAGGTAATGTCATTAATTC+TGG | - | chr7_1:35510871-35510890 | Msa1017090:CDS | 35.0% | |
| TTTAATTCAAAGAACGGTGG+TGG | - | chr7_1:35510967-35510986 | Msa1017090:CDS | 35.0% | |
| GTGGTTAATCGTATAGATTC+TGG | - | chr7_1:35511159-35511178 | Msa1017090:CDS | 35.0% | |
| TAATCGTATAGATTCTGGCA+AGG | - | chr7_1:35511164-35511183 | Msa1017090:CDS | 35.0% | |
| CTCGTAACATTTATCCTGAA+TGG | - | chr7_1:35511208-35511227 | Msa1017090:CDS | 35.0% | |
| ! | TTTTCGAAGATTCCTCTGTT+GGG | - | chr7_1:35511232-35511251 | Msa1017090:CDS | 35.0% |
| !! | ATTTTCAAGACTAAGGCGAA+AGG | - | chr7_1:35511351-35511370 | Msa1017090:CDS | 35.0% |
| AGGTGAGATAATTGAAGATC+AGG | - | chr7_1:35511431-35511450 | Msa1017090:CDS | 35.0% | |
| TTACCACTTGAAGCTTCTAA+GGG | + | chr7_1:35511582-35511601 | None:intergenic | 35.0% | |
| TTTACCACTTGAAGCTTCTA+AGG | + | chr7_1:35511583-35511602 | None:intergenic | 35.0% | |
| ACTATCACATCGATCATCAA+CGG | + | chr7_1:35511610-35511629 | None:intergenic | 35.0% | |
| ACAATTGATGCTGCTAAGTA+TGG | - | chr7_1:35511639-35511658 | Msa1017090:CDS | 35.0% | |
| ACAAATTGGGAGAACAACTA+TGG | + | chr7_1:35511686-35511705 | None:intergenic | 35.0% | |
| ! | AAATGATTTGTGTTGTGGGT+TGG | + | chr7_1:35510323-35510342 | None:intergenic | 35.0% |
| ! | AATCATTTCAAGTCGCCAAT+AGG | - | chr7_1:35510335-35510354 | Msa1017090:CDS | 35.0% |
| !! | CACAATGAGAGTATTGTCAA+AGG | - | chr7_1:35510396-35510415 | Msa1017090:CDS | 35.0% |
| TAGGTGACAAGTTTCAGTAT+TGG | - | chr7_1:35510701-35510720 | Msa1017090:CDS | 35.0% | |
| GGAGGTAATGTCATTAATTC+TGG | - | chr7_1:35510871-35510890 | Msa1017090:CDS | 35.0% | |
| TTTAATTCAAAGAACGGTGG+TGG | - | chr7_1:35510967-35510986 | Msa1017090:CDS | 35.0% | |
| GTGGTTAATCGTATAGATTC+TGG | - | chr7_1:35511159-35511178 | Msa1017090:CDS | 35.0% | |
| TAATCGTATAGATTCTGGCA+AGG | - | chr7_1:35511164-35511183 | Msa1017090:CDS | 35.0% | |
| CTCGTAACATTTATCCTGAA+TGG | - | chr7_1:35511208-35511227 | Msa1017090:CDS | 35.0% | |
| ! | TTTTCGAAGATTCCTCTGTT+GGG | - | chr7_1:35511232-35511251 | Msa1017090:CDS | 35.0% |
| !! | ATTTTCAAGACTAAGGCGAA+AGG | - | chr7_1:35511351-35511370 | Msa1017090:CDS | 35.0% |
| AGGTGAGATAATTGAAGATC+AGG | - | chr7_1:35511431-35511450 | Msa1017090:CDS | 35.0% | |
| TTACCACTTGAAGCTTCTAA+GGG | + | chr7_1:35511582-35511601 | None:intergenic | 35.0% | |
| TTTACCACTTGAAGCTTCTA+AGG | + | chr7_1:35511583-35511602 | None:intergenic | 35.0% | |
| ACTATCACATCGATCATCAA+CGG | + | chr7_1:35511610-35511629 | None:intergenic | 35.0% | |
| ACAATTGATGCTGCTAAGTA+TGG | - | chr7_1:35511639-35511658 | Msa1017090:CDS | 35.0% | |
| ACAAATTGGGAGAACAACTA+TGG | + | chr7_1:35511686-35511705 | None:intergenic | 35.0% | |
| AGAATCCGTGACACTTTGAT+AGG | + | chr7_1:35510616-35510635 | None:intergenic | 40.0% | |
| AATGTCCCTGGAATTGAAGT+AGG | - | chr7_1:35510682-35510701 | Msa1017090:CDS | 40.0% | |
| TGTCACCTACTTCAATTCCA+GGG | + | chr7_1:35510690-35510709 | None:intergenic | 40.0% | |
| TTGTCACCTACTTCAATTCC+AGG | + | chr7_1:35510691-35510710 | None:intergenic | 40.0% | |
| GGTGAGGTGTATTGTTACTA+TGG | - | chr7_1:35511006-35511025 | Msa1017090:CDS | 40.0% | |
| ! | AGGAACAGCTTCTTTTCCAT+TGG | + | chr7_1:35511133-35511152 | None:intergenic | 40.0% |
| AGAAGCTGTTCCTATATGTG+TGG | - | chr7_1:35511140-35511159 | Msa1017090:CDS | 40.0% | |
| GAATCTTCGAAAAGCCATTC+AGG | + | chr7_1:35511225-35511244 | None:intergenic | 40.0% | |
| ! | CTTTTCGAAGATTCCTCTGT+TGG | - | chr7_1:35511231-35511250 | Msa1017090:CDS | 40.0% |
| TCAGAGAATGCAATTGCTTC+TGG | - | chr7_1:35511387-35511406 | Msa1017090:CDS | 40.0% | |
| GTGGGAAGAGGATTCATATA+TGG | - | chr7_1:35511527-35511546 | Msa1017090:CDS | 40.0% | |
| AGAAGCTTCAAGTGGTAAAG+AGG | - | chr7_1:35511584-35511603 | Msa1017090:CDS | 40.0% | |
| !! | GTTGATGATCGATGTGATAG+TGG | - | chr7_1:35511609-35511628 | Msa1017090:CDS | 40.0% |
| !! | ATGATCGATGTGATAGTGGT+AGG | - | chr7_1:35511613-35511632 | Msa1017090:CDS | 40.0% |
| ! | TGCTGCTAAGTATGGTAATG+TGG | - | chr7_1:35511647-35511666 | Msa1017090:CDS | 40.0% |
| ! | CTAAGTATGGTAATGTGGCA+AGG | - | chr7_1:35511652-35511671 | Msa1017090:CDS | 40.0% |
| AAAGTCAGCTCATTCATGCT+CGG | + | chr7_1:35511783-35511802 | None:intergenic | 40.0% | |
| AGAATCCGTGACACTTTGAT+AGG | + | chr7_1:35510616-35510635 | None:intergenic | 40.0% | |
| AATGTCCCTGGAATTGAAGT+AGG | - | chr7_1:35510682-35510701 | Msa1017090:CDS | 40.0% | |
| TGTCACCTACTTCAATTCCA+GGG | + | chr7_1:35510690-35510709 | None:intergenic | 40.0% | |
| TTGTCACCTACTTCAATTCC+AGG | + | chr7_1:35510691-35510710 | None:intergenic | 40.0% | |
| GGTGAGGTGTATTGTTACTA+TGG | - | chr7_1:35511006-35511025 | Msa1017090:CDS | 40.0% | |
| ! | AGGAACAGCTTCTTTTCCAT+TGG | + | chr7_1:35511133-35511152 | None:intergenic | 40.0% |
| AGAAGCTGTTCCTATATGTG+TGG | - | chr7_1:35511140-35511159 | Msa1017090:CDS | 40.0% | |
| GAATCTTCGAAAAGCCATTC+AGG | + | chr7_1:35511225-35511244 | None:intergenic | 40.0% | |
| ! | CTTTTCGAAGATTCCTCTGT+TGG | - | chr7_1:35511231-35511250 | Msa1017090:CDS | 40.0% |
| TCAGAGAATGCAATTGCTTC+TGG | - | chr7_1:35511387-35511406 | Msa1017090:CDS | 40.0% | |
| GTGGGAAGAGGATTCATATA+TGG | - | chr7_1:35511527-35511546 | Msa1017090:CDS | 40.0% | |
| AGAAGCTTCAAGTGGTAAAG+AGG | - | chr7_1:35511584-35511603 | Msa1017090:CDS | 40.0% | |
| !! | GTTGATGATCGATGTGATAG+TGG | - | chr7_1:35511609-35511628 | Msa1017090:CDS | 40.0% |
| !! | ATGATCGATGTGATAGTGGT+AGG | - | chr7_1:35511613-35511632 | Msa1017090:CDS | 40.0% |
| ! | TGCTGCTAAGTATGGTAATG+TGG | - | chr7_1:35511647-35511666 | Msa1017090:CDS | 40.0% |
| ! | CTAAGTATGGTAATGTGGCA+AGG | - | chr7_1:35511652-35511671 | Msa1017090:CDS | 40.0% |
| AAAGTCAGCTCATTCATGCT+CGG | + | chr7_1:35511783-35511802 | None:intergenic | 40.0% | |
| !! | TTTGTGTTGTGGGTTGGTAG+TGG | + | chr7_1:35510317-35510336 | None:intergenic | 45.0% |
| GAGTCATCGGAAGTCAAAGA+CGG | + | chr7_1:35510508-35510527 | None:intergenic | 45.0% | |
| TCTCTGTGGAAAACTCGGTA+AGG | - | chr7_1:35510570-35510589 | Msa1017090:CDS | 45.0% | |
| ! | CGCTTCCTATCAAAGTGTCA+CGG | - | chr7_1:35510608-35510627 | Msa1017090:CDS | 45.0% |
| TCACGGATTCTCAAAAGCAG+AGG | - | chr7_1:35510625-35510644 | Msa1017090:CDS | 45.0% | |
| TGGCAAGAACTCAACGTTGT+TGG | - | chr7_1:35510721-35510740 | Msa1017090:CDS | 45.0% | |
| GTGTTCGTTTATACAGGGGA+AGG | - | chr7_1:35510850-35510869 | Msa1017090:CDS | 45.0% | |
| TTCGTTTATACAGGGGAAGG+AGG | - | chr7_1:35510853-35510872 | Msa1017090:CDS | 45.0% | |
| ! | AATTCAAAGAACGGTGGTGG+TGG | - | chr7_1:35510970-35510989 | Msa1017090:CDS | 45.0% |
| AGAACATTTACGCCCAACAG+AGG | + | chr7_1:35511247-35511266 | None:intergenic | 45.0% | |
| TTTGCCTGTGCTCTTAAGAG+TGG | - | chr7_1:35511279-35511298 | Msa1017090:CDS | 45.0% | |
| TCAAGACTAAGGCGAAAGGA+TGG | - | chr7_1:35511355-35511374 | Msa1017090:CDS | 45.0% | |
| CAAGACTAAGGCGAAAGGAT+GGG | - | chr7_1:35511356-35511375 | Msa1017090:CDS | 45.0% | |
| AAGACTAAGGCGAAAGGATG+GGG | - | chr7_1:35511357-35511376 | Msa1017090:CDS | 45.0% | |
| TTCACAAGGTCTATAGGTCG+TGG | - | chr7_1:35511508-35511527 | Msa1017090:CDS | 45.0% | |
| TCACAAGGTCTATAGGTCGT+GGG | - | chr7_1:35511509-35511528 | Msa1017090:CDS | 45.0% | |
| CAACCCTTAGAAGCTTCAAG+TGG | - | chr7_1:35511576-35511595 | Msa1017090:CDS | 45.0% | |
| GCTGCATATAGCATGATGTG+TGG | + | chr7_1:35511750-35511769 | None:intergenic | 45.0% | |
| !! | TTTGTGTTGTGGGTTGGTAG+TGG | + | chr7_1:35510317-35510336 | None:intergenic | 45.0% |
| GAGTCATCGGAAGTCAAAGA+CGG | + | chr7_1:35510508-35510527 | None:intergenic | 45.0% | |
| TCTCTGTGGAAAACTCGGTA+AGG | - | chr7_1:35510570-35510589 | Msa1017090:CDS | 45.0% | |
| ! | CGCTTCCTATCAAAGTGTCA+CGG | - | chr7_1:35510608-35510627 | Msa1017090:CDS | 45.0% |
| TCACGGATTCTCAAAAGCAG+AGG | - | chr7_1:35510625-35510644 | Msa1017090:CDS | 45.0% | |
| TGGCAAGAACTCAACGTTGT+TGG | - | chr7_1:35510721-35510740 | Msa1017090:CDS | 45.0% | |
| GTGTTCGTTTATACAGGGGA+AGG | - | chr7_1:35510850-35510869 | Msa1017090:CDS | 45.0% | |
| TTCGTTTATACAGGGGAAGG+AGG | - | chr7_1:35510853-35510872 | Msa1017090:CDS | 45.0% | |
| ! | AATTCAAAGAACGGTGGTGG+TGG | - | chr7_1:35510970-35510989 | Msa1017090:CDS | 45.0% |
| AGAACATTTACGCCCAACAG+AGG | + | chr7_1:35511247-35511266 | None:intergenic | 45.0% | |
| TTTGCCTGTGCTCTTAAGAG+TGG | - | chr7_1:35511279-35511298 | Msa1017090:CDS | 45.0% | |
| TCAAGACTAAGGCGAAAGGA+TGG | - | chr7_1:35511355-35511374 | Msa1017090:CDS | 45.0% | |
| CAAGACTAAGGCGAAAGGAT+GGG | - | chr7_1:35511356-35511375 | Msa1017090:CDS | 45.0% | |
| AAGACTAAGGCGAAAGGATG+GGG | - | chr7_1:35511357-35511376 | Msa1017090:CDS | 45.0% | |
| TTCACAAGGTCTATAGGTCG+TGG | - | chr7_1:35511508-35511527 | Msa1017090:CDS | 45.0% | |
| TCACAAGGTCTATAGGTCGT+GGG | - | chr7_1:35511509-35511528 | Msa1017090:CDS | 45.0% | |
| CAACCCTTAGAAGCTTCAAG+TGG | - | chr7_1:35511576-35511595 | Msa1017090:CDS | 45.0% | |
| GCTGCATATAGCATGATGTG+TGG | + | chr7_1:35511750-35511769 | None:intergenic | 45.0% | |
| ! | CGAGTTTTCCACAGAGAGCA+CGG | + | chr7_1:35510567-35510586 | None:intergenic | 50.0% |
| CGTGCTCTCTGTGGAAAACT+CGG | - | chr7_1:35510565-35510584 | Msa1017090:CDS | 50.0% | |
| ! | CACTTTGATAGGAAGCGCGT+CGG | + | chr7_1:35510605-35510624 | None:intergenic | 50.0% |
| CCTGTGCTCTTAAGAGTGGA+GGG | - | chr7_1:35511283-35511302 | Msa1017090:CDS | 50.0% | |
| ! | CGAGTTTTCCACAGAGAGCA+CGG | + | chr7_1:35510567-35510586 | None:intergenic | 50.0% |
| CGTGCTCTCTGTGGAAAACT+CGG | - | chr7_1:35510565-35510584 | Msa1017090:CDS | 50.0% | |
| ! | CACTTTGATAGGAAGCGCGT+CGG | + | chr7_1:35510605-35510624 | None:intergenic | 50.0% |
| CCTGTGCTCTTAAGAGTGGA+GGG | - | chr7_1:35511283-35511302 | Msa1017090:CDS | 50.0% | |
| !! | GGGTTGGTAGTGGAAGACGA+GGG | + | chr7_1:35510307-35510326 | None:intergenic | 55.0% |
| !! | TGGGTTGGTAGTGGAAGACG+AGG | + | chr7_1:35510308-35510327 | None:intergenic | 55.0% |
| GGTAACTTCCGTGCTCTCTG+TGG | - | chr7_1:35510556-35510575 | Msa1017090:CDS | 55.0% | |
| GCCTGTGCTCTTAAGAGTGG+AGG | - | chr7_1:35511282-35511301 | Msa1017090:CDS | 55.0% | |
| ! | CCCTCCACTCTTAAGAGCAC+AGG | + | chr7_1:35511286-35511305 | None:intergenic | 55.0% |
| GGTCTATAGGTCGTGGGAAG+AGG | - | chr7_1:35511515-35511534 | Msa1017090:CDS | 55.0% | |
| !! | GGGTTGGTAGTGGAAGACGA+GGG | + | chr7_1:35510307-35510326 | None:intergenic | 55.0% |
| !! | TGGGTTGGTAGTGGAAGACG+AGG | + | chr7_1:35510308-35510327 | None:intergenic | 55.0% |
| GGTAACTTCCGTGCTCTCTG+TGG | - | chr7_1:35510556-35510575 | Msa1017090:CDS | 55.0% | |
| GCCTGTGCTCTTAAGAGTGG+AGG | - | chr7_1:35511282-35511301 | Msa1017090:CDS | 55.0% | |
| ! | CCCTCCACTCTTAAGAGCAC+AGG | + | chr7_1:35511286-35511305 | None:intergenic | 55.0% |
| GGTCTATAGGTCGTGGGAAG+AGG | - | chr7_1:35511515-35511534 | Msa1017090:CDS | 55.0% | |
| !! | AACGGTGGTGGTGGTGCACG+TGG | - | chr7_1:35510979-35510998 | Msa1017090:CDS | 65.0% |
| ! | TGGTGCACGTGGTGGAGGTG+AGG | - | chr7_1:35510990-35511009 | Msa1017090:CDS | 65.0% |
| !! | AACGGTGGTGGTGGTGCACG+TGG | - | chr7_1:35510979-35510998 | Msa1017090:CDS | 65.0% |
| ! | TGGTGCACGTGGTGGAGGTG+AGG | - | chr7_1:35510990-35511009 | Msa1017090:CDS | 65.0% |
| !! | GGTGGTGGTGGTGCACGTGG+TGG | - | chr7_1:35510982-35511001 | Msa1017090:CDS | 70.0% |
| ! | GGTGGTGGTGCACGTGGTGG+AGG | - | chr7_1:35510985-35511004 | Msa1017090:CDS | 70.0% |
| !! | GGTGGTGGTGGTGCACGTGG+TGG | - | chr7_1:35510982-35511001 | Msa1017090:CDS | 70.0% |
| ! | GGTGGTGGTGCACGTGGTGG+AGG | - | chr7_1:35510985-35511004 | Msa1017090:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 35510289 | 35511905 | 35510289 | ID=Msa1017090;Name=Msa1017090 |
| chr7_1 | mRNA | 35510289 | 35511905 | 35510289 | ID=Msa1017090-mRNA-1;Parent=Msa1017090;Name=Msa1017090-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|-1|0|1|-1|1|1|0|538 |
| chr7_1 | exon | 35510289 | 35511905 | 35510289 | ID=Msa1017090-mRNA-1:exon:6746;Parent=Msa1017090-mRNA-1 |
| chr7_1 | CDS | 35510289 | 35511905 | 35510289 | ID=Msa1017090-mRNA-1:cds;Parent=Msa1017090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
