Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018130 | ABD32483.2 | 82.515 | 326 | 55 | 1 | 1 | 324 | 4 | 329 | 0.0 | 552 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018130 | sp|Q8L3W1|VRN1_ARATH | 27.219 | 338 | 194 | 5 | 15 | 307 | 6 | 336 | 7.12e-33 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018130 | Q2HSK0 | 82.515 | 326 | 55 | 1 | 1 | 324 | 4 | 329 | 0.0 | 552 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1018130 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018130 | MtrunA17_Chr7g0233561 | 82.515 | 326 | 55 | 1 | 1 | 324 | 4 | 329 | 0.0 | 552 |
| Msa1018130 | MtrunA17_Chr3g0131891 | 70.588 | 323 | 87 | 2 | 2 | 324 | 6 | 320 | 2.45e-162 | 456 |
| Msa1018130 | MtrunA17_Chr7g0233541 | 73.579 | 299 | 73 | 5 | 30 | 324 | 1 | 297 | 3.14e-153 | 431 |
| Msa1018130 | MtrunA17_Chr7g0233531 | 72.542 | 295 | 66 | 3 | 30 | 324 | 1 | 280 | 8.38e-143 | 404 |
| Msa1018130 | MtrunA17_Chr7g0233521 | 68.581 | 296 | 76 | 4 | 30 | 324 | 1 | 280 | 2.80e-136 | 387 |
| Msa1018130 | MtrunA17_Chr7g0233571 | 60.280 | 214 | 80 | 3 | 9 | 218 | 4 | 216 | 1.59e-82 | 249 |
| Msa1018130 | MtrunA17_Chr8g0390841 | 37.700 | 313 | 159 | 8 | 13 | 307 | 37 | 331 | 2.04e-55 | 188 |
| Msa1018130 | MtrunA17_Chr8g0390841 | 25.658 | 304 | 188 | 13 | 15 | 307 | 242 | 518 | 1.44e-13 | 71.2 |
| Msa1018130 | MtrunA17_Chr1g0208771 | 36.242 | 298 | 162 | 7 | 23 | 307 | 8 | 290 | 3.81e-49 | 170 |
| Msa1018130 | MtrunA17_Chr1g0163071 | 35.235 | 298 | 162 | 8 | 30 | 307 | 1 | 287 | 3.77e-47 | 161 |
| Msa1018130 | MtrunA17_Chr3g0103181 | 31.803 | 305 | 164 | 10 | 12 | 306 | 9 | 279 | 6.29e-40 | 141 |
| Msa1018130 | MtrunA17_Chr3g0103151 | 56.311 | 103 | 43 | 1 | 12 | 114 | 9 | 109 | 8.73e-35 | 124 |
| Msa1018130 | MtrunA17_Chr3g0103171 | 30.035 | 283 | 168 | 9 | 31 | 306 | 6 | 265 | 3.96e-34 | 125 |
| Msa1018130 | MtrunA17_Chr1g0163231 | 29.934 | 304 | 171 | 8 | 12 | 305 | 6 | 277 | 7.09e-34 | 126 |
| Msa1018130 | MtrunA17_Chr3g0103191 | 54.369 | 103 | 45 | 1 | 12 | 114 | 9 | 109 | 2.15e-33 | 123 |
| Msa1018130 | MtrunA17_Chr1g0163181 | 31.119 | 286 | 175 | 9 | 29 | 305 | 19 | 291 | 8.04e-33 | 126 |
| Msa1018130 | MtrunA17_Chr1g0163251 | 31.613 | 310 | 177 | 10 | 15 | 317 | 9 | 290 | 1.31e-32 | 124 |
| Msa1018130 | MtrunA17_Chr1g0171611 | 31.908 | 304 | 153 | 9 | 12 | 305 | 6 | 265 | 2.70e-32 | 121 |
| Msa1018130 | MtrunA17_Chr1g0163261 | 31.746 | 315 | 185 | 11 | 12 | 320 | 6 | 296 | 4.70e-32 | 121 |
| Msa1018130 | MtrunA17_Chr1g0154161 | 27.564 | 312 | 195 | 10 | 13 | 315 | 28 | 317 | 3.58e-29 | 114 |
| Msa1018130 | MtrunA17_Chr4g0067431 | 30.492 | 305 | 195 | 9 | 13 | 306 | 13 | 311 | 5.53e-29 | 113 |
| Msa1018130 | MtrunA17_Chr1g0163221 | 29.373 | 303 | 192 | 10 | 9 | 306 | 5 | 290 | 2.50e-28 | 112 |
| Msa1018130 | MtrunA17_Chr5g0419201 | 45.455 | 99 | 54 | 0 | 15 | 113 | 16 | 114 | 1.01e-27 | 107 |
| Msa1018130 | MtrunA17_Chr1g0163201 | 30.375 | 293 | 168 | 8 | 28 | 307 | 16 | 285 | 1.94e-26 | 108 |
| Msa1018130 | MtrunA17_Chr3g0077451 | 25.517 | 290 | 146 | 6 | 29 | 310 | 10 | 237 | 2.95e-26 | 104 |
| Msa1018130 | MtrunA17_Chr1g0154131 | 28.669 | 293 | 184 | 7 | 14 | 294 | 178 | 457 | 9.77e-26 | 107 |
| Msa1018130 | MtrunA17_Chr1g0154131 | 26.263 | 297 | 166 | 8 | 14 | 303 | 20 | 270 | 4.74e-16 | 78.6 |
| Msa1018130 | MtrunA17_Chr5g0429931 | 26.389 | 288 | 151 | 7 | 31 | 310 | 11 | 245 | 2.39e-24 | 99.4 |
| Msa1018130 | MtrunA17_Chr3g0077411 | 26.625 | 323 | 177 | 11 | 1 | 310 | 245 | 520 | 4.32e-24 | 102 |
| Msa1018130 | MtrunA17_Chr3g0077411 | 32.787 | 122 | 78 | 1 | 8 | 129 | 18 | 135 | 2.85e-17 | 82.4 |
| Msa1018130 | MtrunA17_Chr1g0154171 | 23.964 | 338 | 197 | 8 | 13 | 306 | 21 | 342 | 3.42e-23 | 98.6 |
| Msa1018130 | MtrunA17_Chr1g0154111 | 25.610 | 328 | 196 | 5 | 13 | 295 | 24 | 348 | 5.50e-23 | 99.4 |
| Msa1018130 | MtrunA17_Chr6g0467351 | 40.769 | 130 | 68 | 2 | 13 | 133 | 13 | 142 | 2.76e-22 | 93.6 |
| Msa1018130 | MtrunA17_Chr1g0154041 | 27.027 | 333 | 190 | 9 | 10 | 294 | 11 | 338 | 1.46e-21 | 95.1 |
| Msa1018130 | MtrunA17_Chr3g0103201 | 30.364 | 247 | 135 | 10 | 70 | 306 | 1 | 220 | 3.68e-21 | 90.1 |
| Msa1018130 | MtrunA17_Chr1g0163131 | 27.414 | 321 | 180 | 12 | 8 | 303 | 11 | 303 | 3.76e-21 | 92.0 |
| Msa1018130 | MtrunA17_Chr1g0154071 | 27.326 | 344 | 187 | 11 | 19 | 312 | 159 | 489 | 5.98e-21 | 93.2 |
| Msa1018130 | MtrunA17_Chr1g0154071 | 28.689 | 122 | 77 | 3 | 16 | 134 | 28 | 142 | 3.26e-11 | 63.9 |
| Msa1018130 | MtrunA17_Chr4g0033961 | 39.394 | 99 | 60 | 0 | 15 | 113 | 6 | 104 | 2.63e-20 | 90.9 |
| Msa1018130 | MtrunA17_Chr4g0033961 | 33.083 | 133 | 83 | 2 | 180 | 312 | 267 | 393 | 5.17e-15 | 75.5 |
| Msa1018130 | MtrunA17_Chr3g0077461 | 28.720 | 289 | 143 | 9 | 6 | 294 | 230 | 455 | 4.50e-20 | 90.5 |
| Msa1018130 | MtrunA17_Chr3g0077461 | 33.333 | 99 | 62 | 1 | 31 | 129 | 23 | 117 | 9.90e-16 | 77.8 |
| Msa1018130 | MtrunA17_Chr1g0162441 | 40.404 | 99 | 59 | 0 | 15 | 113 | 7 | 105 | 7.13e-20 | 89.7 |
| Msa1018130 | MtrunA17_Chr1g0162441 | 32.090 | 134 | 85 | 2 | 180 | 313 | 271 | 398 | 7.94e-15 | 74.7 |
| Msa1018130 | MtrunA17_Chr1g0154151 | 24.252 | 301 | 194 | 7 | 24 | 299 | 16 | 307 | 3.37e-19 | 86.7 |
| Msa1018130 | MtrunA17_Chr1g0154191 | 25.000 | 344 | 196 | 8 | 13 | 305 | 20 | 352 | 4.27e-19 | 87.0 |
| Msa1018130 | MtrunA17_Chr1g0163101 | 39.655 | 116 | 67 | 2 | 10 | 125 | 12 | 124 | 3.11e-18 | 81.3 |
| Msa1018130 | MtrunA17_Chr3g0077381 | 28.481 | 158 | 108 | 2 | 29 | 184 | 34 | 188 | 1.21e-16 | 80.1 |
| Msa1018130 | MtrunA17_Chr3g0077381 | 32.203 | 118 | 80 | 0 | 14 | 131 | 246 | 363 | 1.44e-13 | 71.2 |
| Msa1018130 | MtrunA17_Chr1g0163241 | 42.157 | 102 | 53 | 3 | 19 | 119 | 14 | 110 | 1.34e-16 | 76.3 |
| Msa1018130 | MtrunA17_Chr1g0163191 | 41.000 | 100 | 53 | 2 | 15 | 114 | 9 | 102 | 2.36e-16 | 75.5 |
| Msa1018130 | MtrunA17_Chr1g0163121 | 44.792 | 96 | 50 | 2 | 29 | 124 | 9 | 101 | 2.54e-16 | 74.7 |
| Msa1018130 | MtrunA17_Chr3g0077361 | 24.113 | 282 | 146 | 7 | 14 | 294 | 39 | 253 | 2.76e-16 | 79.3 |
| Msa1018130 | MtrunA17_Chr1g0163061 | 39.048 | 105 | 63 | 1 | 13 | 116 | 13 | 117 | 8.71e-16 | 76.3 |
| Msa1018130 | MtrunA17_Chr1g0163141 | 35.821 | 134 | 68 | 5 | 29 | 148 | 9 | 138 | 1.40e-15 | 73.9 |
| Msa1018130 | MtrunA17_Chr4g0009491 | 33.051 | 118 | 79 | 0 | 14 | 131 | 224 | 341 | 1.59e-15 | 77.0 |
| Msa1018130 | MtrunA17_Chr4g0009491 | 28.472 | 144 | 98 | 2 | 29 | 170 | 11 | 151 | 7.99e-15 | 74.7 |
| Msa1018130 | MtrunA17_Chr1g0162411 | 36.275 | 102 | 65 | 0 | 15 | 116 | 7 | 108 | 3.71e-15 | 75.9 |
| Msa1018130 | MtrunA17_Chr6g0476181 | 45.882 | 85 | 43 | 2 | 30 | 114 | 1 | 82 | 6.96e-15 | 71.2 |
| Msa1018130 | MtrunA17_Chr1g0154101 | 36.957 | 92 | 58 | 0 | 13 | 104 | 23 | 114 | 1.28e-14 | 74.7 |
| Msa1018130 | MtrunA17_Chr1g0154101 | 35.922 | 103 | 63 | 3 | 13 | 114 | 182 | 282 | 2.97e-12 | 67.4 |
| Msa1018130 | MtrunA17_Chr1g0154251 | 37.374 | 99 | 60 | 2 | 13 | 110 | 25 | 122 | 3.31e-14 | 73.2 |
| Msa1018130 | MtrunA17_Chr1g0154211 | 27.027 | 185 | 115 | 6 | 13 | 193 | 21 | 189 | 3.58e-14 | 72.8 |
| Msa1018130 | MtrunA17_Chr1g0162161 | 37.500 | 96 | 57 | 2 | 30 | 125 | 3 | 95 | 1.33e-12 | 65.1 |
| Msa1018130 | MtrunA17_Chr1g0163111 | 40.777 | 103 | 56 | 3 | 205 | 307 | 14 | 111 | 1.92e-12 | 65.9 |
| Msa1018130 | MtrunA17_Chr1g0154241 | 33.696 | 92 | 60 | 1 | 13 | 104 | 20 | 110 | 3.20e-12 | 65.9 |
| Msa1018130 | MtrunA17_Chr1g0163091 | 37.719 | 114 | 60 | 4 | 205 | 315 | 22 | 127 | 6.67e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018130 | AT3G18990.2 | 27.273 | 341 | 196 | 5 | 15 | 310 | 6 | 339 | 4.96e-34 | 128 |
| Msa1018130 | AT3G18990.1 | 27.219 | 338 | 194 | 5 | 15 | 307 | 6 | 336 | 7.24e-34 | 127 |
| Msa1018130 | AT4G33280.1 | 27.410 | 332 | 188 | 11 | 14 | 315 | 19 | 327 | 6.45e-23 | 97.8 |
| Msa1018130 | AT1G49475.1 | 43.564 | 101 | 56 | 1 | 15 | 115 | 34 | 133 | 1.28e-21 | 90.9 |
| Msa1018130 | AT4G01580.1 | 41.584 | 101 | 59 | 0 | 15 | 115 | 30 | 130 | 2.86e-21 | 90.1 |
| Msa1018130 | AT3G18960.2 | 40.594 | 101 | 60 | 0 | 15 | 115 | 30 | 130 | 3.08e-20 | 87.4 |
| Msa1018130 | AT3G18960.1 | 40.594 | 101 | 60 | 0 | 15 | 115 | 30 | 130 | 3.77e-20 | 87.4 |
| Msa1018130 | AT3G18960.3 | 43.529 | 85 | 48 | 0 | 31 | 115 | 9 | 93 | 4.21e-17 | 78.2 |
| Msa1018130 | AT4G33280.2 | 38.000 | 100 | 58 | 2 | 14 | 109 | 19 | 118 | 1.76e-13 | 70.1 |
| Msa1018130 | AT4G33280.3 | 38.000 | 100 | 58 | 2 | 14 | 109 | 19 | 118 | 3.34e-13 | 70.1 |
| Msa1018130 | AT3G53310.1 | 32.353 | 102 | 67 | 2 | 5 | 106 | 2 | 101 | 6.79e-12 | 65.5 |
Find 50 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAATGGAAATTAAATT+TGG | 0.157556 | 7_1:+38002291 | Msa1018130:CDS |
| TTTCACCAACAATGTGAAAT+TGG | 0.216826 | 7_1:+38002580 | Msa1018130:CDS |
| GGTTTCCTTGGAGAAGGTTT+TGG | 0.257981 | 7_1:-37999923 | None:intergenic |
| TGCTTCCAATTTCACATTGT+TGG | 0.309809 | 7_1:-38002585 | None:intergenic |
| GTCTTTAGACATATAGCTTT+TGG | 0.314158 | 7_1:-38002259 | None:intergenic |
| AGGTCTTGAATGGGAGAGTT+TGG | 0.339611 | 7_1:+38003599 | Msa1018130:CDS |
| GAGAGGAGATATTCAACTTC+AGG | 0.362528 | 7_1:+38003579 | Msa1018130:CDS |
| AGACTCCAGATGGTGCAAAA+TGG | 0.364107 | 7_1:+38002278 | Msa1018130:CDS |
| CGTTGAACACCACTTTCTTC+CGG | 0.401759 | 7_1:+38003039 | Msa1018130:CDS |
| AAAAGAGTGATGGCAAGATA+TGG | 0.414999 | 7_1:+38002314 | Msa1018130:CDS |
| ATTCAACTTCAGGTCTTGAA+TGG | 0.422880 | 7_1:+38003589 | Msa1018130:CDS |
| GATGATGCCAAGAAAGTTTG+TGG | 0.433802 | 7_1:+38002216 | Msa1018130:intron |
| GGTCTGCTAGGTATTCTATC+AGG | 0.438342 | 7_1:+38003620 | Msa1018130:CDS |
| AAAGGCTTACAAGGTTTCCT+TGG | 0.438933 | 7_1:-37999935 | None:intergenic |
| AGATATGGTTTGAGAAGGGT+TGG | 0.481735 | 7_1:+38002329 | Msa1018130:CDS |
| TTCAACTTCAGGTCTTGAAT+GGG | 0.489627 | 7_1:+38003590 | Msa1018130:CDS |
| TCTATCAGGATGTGCGCTAA+AGG | 0.492186 | 7_1:+38003634 | Msa1018130:CDS |
| AAGGACAATAACTTGAAAGT+TGG | 0.499244 | 7_1:+38003697 | Msa1018130:CDS |
| AGGTTTATTTCCTTGACCAT+TGG | 0.505200 | 7_1:-38002500 | None:intergenic |
| ATGGGAGAGTTTGGTCTGCT+AGG | 0.505527 | 7_1:+38003608 | Msa1018130:CDS |
| ATTGTTTAACATTTCAGAGT+AGG | 0.512018 | 7_1:+38003806 | Msa1018130:CDS |
| TTACAAGGTTTCCTTGGAGA+AGG | 0.514232 | 7_1:-37999929 | None:intergenic |
| CAAAAGACTTGAAGCTCAGA+AGG | 0.519010 | 7_1:+38002474 | Msa1018130:CDS |
| TTAAATTTGGAAAAGAGTGA+TGG | 0.536531 | 7_1:+38002304 | Msa1018130:CDS |
| ACATTGTTGGTGAAATTCAA+AGG | 0.541544 | 7_1:-38002572 | None:intergenic |
| TCTAAAGATATGAACAATGA+AGG | 0.545794 | 7_1:-38003761 | None:intergenic |
| TGGCAAGATATGGTTTGAGA+AGG | 0.555350 | 7_1:+38002324 | Msa1018130:CDS |
| AAAACATGGAAAGTCGCAAA+AGG | 0.558949 | 7_1:+38002618 | Msa1018130:CDS |
| CTAAAATTTGAACTCACAAG+TGG | 0.566527 | 7_1:+38003658 | Msa1018130:CDS |
| TGAACTCACAAGTGGATGGA+AGG | 0.567593 | 7_1:+38003666 | Msa1018130:CDS |
| CTCATGACAACAACAAAGGA+TGG | 0.571041 | 7_1:-38003007 | None:intergenic |
| GAGCATCACTCTCTAGCTCA+TGG | 0.577825 | 7_1:+38002364 | Msa1018130:CDS |
| CAGAAGGTCTCCAATGGTCA+AGG | 0.588926 | 7_1:+38002490 | Msa1018130:CDS |
| TGCAGCTTACCGGAAGAAAG+TGG | 0.589285 | 7_1:-38003048 | None:intergenic |
| AATTTGAACTCACAAGTGGA+TGG | 0.599548 | 7_1:+38003662 | Msa1018130:CDS |
| TTTGATTTGAATAAGAAGAG+AGG | 0.602796 | 7_1:+38003562 | Msa1018130:CDS |
| GGCAAGATATGGTTTGAGAA+GGG | 0.606783 | 7_1:+38002325 | Msa1018130:CDS |
| ACATGGAAAGTCGCAAAAGG+TGG | 0.608889 | 7_1:+38002621 | Msa1018130:CDS |
| ATATGTCTAAAGACTCCAGA+TGG | 0.609807 | 7_1:+38002268 | Msa1018130:CDS |
| AGCATTAGTTGTGTAAAACA+TGG | 0.615182 | 7_1:+38002604 | Msa1018130:CDS |
| GAAGCTCAGAAGGTCTCCAA+TGG | 0.625954 | 7_1:+38002484 | Msa1018130:CDS |
| CTTACCCAAAACCTTCTCCA+AGG | 0.638528 | 7_1:+37999918 | Msa1018130:CDS |
| TGGATGGAAGGCATTTGCAA+AGG | 0.640290 | 7_1:+38003678 | Msa1018130:CDS |
| TGTGTCTTACAAAACAAGGA+TGG | 0.644962 | 7_1:-38003538 | None:intergenic |
| CAAATTGATAGAATGTCCAA+AGG | 0.647085 | 7_1:+38002652 | Msa1018130:CDS |
| AAAGTGTGTCTTACAAAACA+AGG | 0.647663 | 7_1:-38003542 | None:intergenic |
| CAAGGAAATAAACCTCCGAA+TGG | 0.648381 | 7_1:+38002508 | Msa1018130:CDS |
| TGCACTCATGACAACAACAA+AGG | 0.665197 | 7_1:-38003011 | None:intergenic |
| TTGTTGGTGAAATTCAAAGG+AGG | 0.687241 | 7_1:-38002569 | None:intergenic |
| CATGGCTAGTGAAATTGCTG+AGG | 0.726199 | 7_1:+37999866 | Msa1018130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTAACATTTTTATTTTC+TGG | + | chr7_1:38002758-38002777 | Msa1018130:intron | 10.0% |
| !! | CAATAAATAAATAACAGTAA+AGG | - | chr7_1:37999956-37999975 | None:intergenic | 15.0% |
| !! | TTTCAAAAAAAAAAATGTCA+TGG | - | chr7_1:38000121-38000140 | None:intergenic | 15.0% |
| !! | AAAAGAAAATTAATATGTCA+TGG | - | chr7_1:38000159-38000178 | None:intergenic | 15.0% |
| !! | CAAAAAAATGCATAAAAATA+AGG | - | chr7_1:38000352-38000371 | None:intergenic | 15.0% |
| !!! | AAATGTTTTTAGTTTTTTAG+GGG | - | chr7_1:38000621-38000640 | None:intergenic | 15.0% |
| !!! | CAAATGTTTTTAGTTTTTTA+GGG | - | chr7_1:38000622-38000641 | None:intergenic | 15.0% |
| !!! | CAATTATTTTACATTACTTT+AGG | - | chr7_1:38002158-38002177 | None:intergenic | 15.0% |
| !! | AGTTATATCATTCATATTAA+TGG | + | chr7_1:38002178-38002197 | Msa1018130:intron | 15.0% |
| !! | TTAGAATAACTTTAATTAGT+TGG | + | chr7_1:38002831-38002850 | Msa1018130:intron | 15.0% |
| !!! | GGTGTTTTTATTTTTATTTT+TGG | - | chr7_1:38003451-38003470 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAACACCAAA+GGG | - | chr7_1:38003472-38003491 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAAACACCAA+AGG | - | chr7_1:38003473-38003492 | None:intergenic | 15.0% |
| !! | ATCAAATTGTTCTGTAATTT+AGG | - | chr7_1:38000298-38000317 | None:intergenic | 20.0% |
| !!! | GCAAATGTTTTTAGTTTTTT+AGG | - | chr7_1:38000623-38000642 | None:intergenic | 20.0% |
| !!! | ATATTCATATCGTTTTTGTT+CGG | - | chr7_1:38000691-38000710 | None:intergenic | 20.0% |
| !!! | AAACGTTTTTAGTTTATTAG+AGG | - | chr7_1:38000832-38000851 | None:intergenic | 20.0% |
| !! | GGTAAAATTGGAAAAAAATA+GGG | + | chr7_1:38001941-38001960 | Msa1018130:intron | 20.0% |
| !! | TGCAAAATGGAAATTAAATT+TGG | + | chr7_1:38002291-38002310 | Msa1018130:CDS | 20.0% |
| !! | AAAAATTTGTACCTCAAATT+TGG | - | chr7_1:38002422-38002441 | None:intergenic | 20.0% |
| !!! | AAATTTGAGGTACAAATTTT+TGG | + | chr7_1:38002421-38002440 | Msa1018130:CDS | 20.0% |
| !!! | AAAAACCTTTTTATTGTTGT+TGG | - | chr7_1:38003109-38003128 | None:intergenic | 20.0% |
| !! | ATAAAAATAAAAACACCCTT+TGG | + | chr7_1:38003454-38003473 | Msa1018130:intron | 20.0% |
| ! | TAAGTATGATCTTGAAAAAG+TGG | - | chr7_1:37999902-37999921 | None:intergenic | 25.0% |
| !!! | ACATGATGTTACTTTGTATT+TGG | + | chr7_1:38000008-38000027 | Msa1018130:intron | 25.0% |
| ! | AATCAACGACATATCATAAA+TGG | + | chr7_1:38000183-38000202 | Msa1018130:intron | 25.0% |
| ! | ATCAACGACATATCATAAAT+GGG | + | chr7_1:38000184-38000203 | Msa1018130:intron | 25.0% |
| ! | AAACTTAGAGTTAAACCTAA+TGG | + | chr7_1:38000264-38000283 | Msa1018130:intron | 25.0% |
| ! | TTTGAAGAACATTTCTCTTT+AGG | + | chr7_1:38000368-38000387 | Msa1018130:intron | 25.0% |
| !!! | GTATTTTTGGAATTTTTGCA+GGG | - | chr7_1:38000471-38000490 | None:intergenic | 25.0% |
| ! | AAAAATTCCAAAAATACCCT+TGG | + | chr7_1:38000474-38000493 | Msa1018130:intron | 25.0% |
| ! | TTTGTTCGGATTTAAATTTC+CGG | - | chr7_1:38000677-38000696 | None:intergenic | 25.0% |
| !!! | TTTTAGTTTATTAGAGGTGT+CGG | - | chr7_1:38000826-38000845 | None:intergenic | 25.0% |
| ! | TGAAGAAAATTGAAGAAAAG+AGG | + | chr7_1:38000851-38000870 | Msa1018130:intron | 25.0% |
| !! | ACTTGTTTAAGGCTATAAAT+AGG | - | chr7_1:38000914-38000933 | None:intergenic | 25.0% |
| ! | TTAATCCGGAAAATATATTC+CGG | + | chr7_1:38001107-38001126 | Msa1018130:intron | 25.0% |
| !!! | GGTTTAAAAGGGTATTTATA+GGG | - | chr7_1:38001293-38001312 | None:intergenic | 25.0% |
| ! | AGGAGATTAGAAATAGATTT+AGG | + | chr7_1:38001677-38001696 | Msa1018130:intron | 25.0% |
| !!! | TGTTTCTGGATTTTAAAATC+CGG | - | chr7_1:38001873-38001892 | None:intergenic | 25.0% |
| ! | GGGTAAAATTGGAAAAAAAT+AGG | + | chr7_1:38001940-38001959 | Msa1018130:intron | 25.0% |
| ! | TCTTGCCAATTTATTCAATT+TGG | + | chr7_1:38002100-38002119 | Msa1018130:intron | 25.0% |
| !! | TATTTTTCCACAAACTTTCT+TGG | - | chr7_1:38002226-38002245 | None:intergenic | 25.0% |
| ! | AGAAAGTTTGTGGAAAAATA+TGG | + | chr7_1:38002226-38002245 | Msa1018130:CDS | 25.0% |
| ! | TTAAATTTGGAAAAGAGTGA+TGG | + | chr7_1:38002304-38002323 | Msa1018130:CDS | 25.0% |
| ! | TGAAAAAACTTCCAAATTTG+AGG | + | chr7_1:38002408-38002427 | Msa1018130:CDS | 25.0% |
| !!! | TTTTATTTTCTGGAGTGTTA+AGG | + | chr7_1:38002768-38002787 | Msa1018130:intron | 25.0% |
| !!! | TTTATTTTCTGGAGTGTTAA+GGG | + | chr7_1:38002769-38002788 | Msa1018130:intron | 25.0% |
| !! | TGCAAAATTGGAACATTTTA+AGG | - | chr7_1:38002915-38002934 | None:intergenic | 25.0% |
| !! | TTAAAATGTTCCAATTTTGC+AGG | + | chr7_1:38002914-38002933 | Msa1018130:intron | 25.0% |
| ! | GTTAAAAAGATCATATCTAG+TGG | - | chr7_1:38003133-38003152 | None:intergenic | 25.0% |
| !! | CATTTGCATTTTCTATTGTT+TGG | + | chr7_1:38003506-38003525 | Msa1018130:intron | 25.0% |
| !!! | TTTGATTTGAATAAGAAGAG+AGG | + | chr7_1:38003562-38003581 | Msa1018130:CDS | 25.0% |
| ! | TCTAAAGATATGAACAATGA+AGG | - | chr7_1:38003764-38003783 | None:intergenic | 25.0% |
| ! | ATTGTTTAACATTTCAGAGT+AGG | + | chr7_1:38003806-38003825 | Msa1018130:CDS | 25.0% |
| ATGATCTTGAAAAAGTGGAT+TGG | - | chr7_1:37999897-37999916 | None:intergenic | 30.0% | |
| AATAACAGTAAAGGCTTACA+AGG | - | chr7_1:37999947-37999966 | None:intergenic | 30.0% | |
| !!! | GGTATTTTTGGAATTTTTGC+AGG | - | chr7_1:38000472-38000491 | None:intergenic | 30.0% |
| AAGTAACTAACAATCTGGTT+CGG | - | chr7_1:38000515-38000534 | None:intergenic | 30.0% | |
| !!! | TTTTAGTTTTTTAGGGGTGT+CGG | - | chr7_1:38000615-38000634 | None:intergenic | 30.0% |
| TGCAGAAAATTGAAGAAAAG+AGG | + | chr7_1:38000640-38000659 | Msa1018130:intron | 30.0% | |
| TGTGTATTTCTTTGATGTCA+AGG | + | chr7_1:38000713-38000732 | Msa1018130:intron | 30.0% | |
| GTGTATTTCTTTGATGTCAA+GGG | + | chr7_1:38000714-38000733 | Msa1018130:intron | 30.0% | |
| ATTGACTGTATTAATGACCT+AGG | - | chr7_1:38000937-38000956 | None:intergenic | 30.0% | |
| ! | TGAAAGAGAGCCTTTAATTT+GGG | - | chr7_1:38000991-38001010 | None:intergenic | 30.0% |
| TTGAAAGAGAGCCTTTAATT+TGG | - | chr7_1:38000992-38001011 | None:intergenic | 30.0% | |
| !! | ACATTCTGGAATGTAAAATC+CGG | - | chr7_1:38001037-38001056 | None:intergenic | 30.0% |
| AAATATATTCCGGAAACCAA+TGG | + | chr7_1:38001117-38001136 | Msa1018130:intron | 30.0% | |
| ATAAATGCAGTCAAATAACG+TGG | - | chr7_1:38001241-38001260 | None:intergenic | 30.0% | |
| ACGTTATTTGACTGCATTTA+TGG | + | chr7_1:38001240-38001259 | Msa1018130:intron | 30.0% | |
| !! | TAAAAGGGTATTTATAGGGA+GGG | - | chr7_1:38001289-38001308 | None:intergenic | 30.0% |
| !! | TTAAAAGGGTATTTATAGGG+AGG | - | chr7_1:38001290-38001309 | None:intergenic | 30.0% |
| !! | GGGTTTAAAAGGGTATTTAT+AGG | - | chr7_1:38001294-38001313 | None:intergenic | 30.0% |
| GCTCTTAGAAGATTAGAATT+AGG | + | chr7_1:38001649-38001668 | Msa1018130:intron | 30.0% | |
| AAGATTAGAATTAGGCTCTT+AGG | + | chr7_1:38001657-38001676 | Msa1018130:intron | 30.0% | |
| GTTCTGCTAAAATACTATTC+CGG | + | chr7_1:38001851-38001870 | Msa1018130:intron | 30.0% | |
| TTAAAATCCAGAAACATCTG+AGG | + | chr7_1:38001877-38001896 | Msa1018130:intron | 30.0% | |
| !!! | TTTTTTTCCAATTTTACCCC+TGG | - | chr7_1:38001939-38001958 | None:intergenic | 30.0% |
| ACTGGATGTATGTTTATTCT+GGG | - | chr7_1:38002012-38002031 | None:intergenic | 30.0% | |
| TACTGGATGTATGTTTATTC+TGG | - | chr7_1:38002013-38002032 | None:intergenic | 30.0% | |
| ! | TAAGTACCTGATGTGTATTT+TGG | + | chr7_1:38002035-38002054 | Msa1018130:intron | 30.0% |
| CAATTTATTCAATTTGGCCA+GGG | + | chr7_1:38002106-38002125 | Msa1018130:intron | 30.0% | |
| AATTTATTCAATTTGGCCAG+GGG | + | chr7_1:38002107-38002126 | Msa1018130:intron | 30.0% | |
| ! | TACATTACTTTAGGAAACAC+TGG | - | chr7_1:38002149-38002168 | None:intergenic | 30.0% |
| TTTGTGGAAAAATATGGAAG+AGG | + | chr7_1:38002232-38002251 | Msa1018130:CDS | 30.0% | |
| ! | GTCTTTAGACATATAGCTTT+TGG | - | chr7_1:38002262-38002281 | None:intergenic | 30.0% |
| CATATCTAAAAAGCAGAAGA+TGG | - | chr7_1:38002390-38002409 | None:intergenic | 30.0% | |
| !!! | AATTTTTGGAAAGAGTGCTT+TGG | + | chr7_1:38002435-38002454 | Msa1018130:CDS | 30.0% |
| ! | ACATTGTTGGTGAAATTCAA+AGG | - | chr7_1:38002575-38002594 | None:intergenic | 30.0% |
| TTTCACCAACAATGTGAAAT+TGG | + | chr7_1:38002580-38002599 | Msa1018130:CDS | 30.0% | |
| AGCATTAGTTGTGTAAAACA+TGG | + | chr7_1:38002604-38002623 | Msa1018130:CDS | 30.0% | |
| CAAATTGATAGAATGTCCAA+AGG | + | chr7_1:38002652-38002671 | Msa1018130:CDS | 30.0% | |
| GACATAAAATCGTATACCTT+TGG | - | chr7_1:38002671-38002690 | None:intergenic | 30.0% | |
| GGTTGCTAAAAATTTAAGCA+TGG | - | chr7_1:38002868-38002887 | None:intergenic | 30.0% | |
| ATATTTGACGATAATCTTCG+AGG | - | chr7_1:38002889-38002908 | None:intergenic | 30.0% | |
| AGTAGCCAACAACAATAAAA+AGG | + | chr7_1:38003101-38003120 | Msa1018130:intron | 30.0% | |
| GTAATCACATGTGTCAATAT+CGG | - | chr7_1:38003206-38003225 | None:intergenic | 30.0% | |
| ! | ATCAATTTTACCGTGACAAT+TGG | - | chr7_1:38003310-38003329 | None:intergenic | 30.0% |
| !! | TTTTTGGTGATCAAAAGACT+GGG | - | chr7_1:38003435-38003454 | None:intergenic | 30.0% |
| !!! | ATTTTTGGTGATCAAAAGAC+TGG | - | chr7_1:38003436-38003455 | None:intergenic | 30.0% |
| AAAGTGTGTCTTACAAAACA+AGG | - | chr7_1:38003545-38003564 | None:intergenic | 30.0% | |
| CTAAAATTTGAACTCACAAG+TGG | + | chr7_1:38003658-38003677 | Msa1018130:CDS | 30.0% | |
| AAGGACAATAACTTGAAAGT+TGG | + | chr7_1:38003697-38003716 | Msa1018130:CDS | 30.0% | |
| ! | CCTTTTATCATGCCATCATA+AGG | - | chr7_1:38000084-38000103 | None:intergenic | 35.0% |
| CCTTATGATGGCATGATAAA+AGG | + | chr7_1:38000081-38000100 | Msa1018130:intron | 35.0% | |
| AGGGTGGAAAAAATAAATCC+CGG | - | chr7_1:38000432-38000451 | None:intergenic | 35.0% | |
| ACCAGATTGTTAGTTACTTC+CGG | + | chr7_1:38000516-38000535 | Msa1018130:intron | 35.0% | |
| TTGTAACTAACAATCTGGTC+CGG | - | chr7_1:38000538-38000557 | None:intergenic | 35.0% | |
| TCAGCTTGTAACTAACAATC+TGG | - | chr7_1:38000543-38000562 | None:intergenic | 35.0% | |
| TATTGCAGGGTTCATATGAA+CGG | + | chr7_1:38000568-38000587 | Msa1018130:intron | 35.0% | |
| AAAAGAGGTGAAGAGATTTC+CGG | + | chr7_1:38000655-38000674 | Msa1018130:intron | 35.0% | |
| AATAGCATTTCAGCTTGTGT+GGG | - | chr7_1:38000763-38000782 | None:intergenic | 35.0% | |
| AAAAGAGGTGAAGTGAAGAA+TGG | + | chr7_1:38000866-38000885 | Msa1018130:intron | 35.0% | |
| !! | ATGGAGGTATTTGTTGAAGA+TGG | + | chr7_1:38000885-38000904 | Msa1018130:intron | 35.0% |
| ! | TATAGCCTTAAACAAGTCCT+AGG | + | chr7_1:38000917-38000936 | Msa1018130:intron | 35.0% |
| ! | AATGACCTAGGACTTGTTTA+AGG | - | chr7_1:38000925-38000944 | None:intergenic | 35.0% |
| AGTCAATGAAAACGTGTTAG+TGG | + | chr7_1:38000950-38000969 | Msa1018130:intron | 35.0% | |
| TCACCATTATCGCATTAATC+CGG | + | chr7_1:38001093-38001112 | Msa1018130:intron | 35.0% | |
| TTTCCGGATTAATGCGATAA+TGG | - | chr7_1:38001099-38001118 | None:intergenic | 35.0% | |
| ! | GGTTTCCGGAATATATTTTC+CGG | - | chr7_1:38001115-38001134 | None:intergenic | 35.0% |
| !! | AAAAGGGTATTTATAGGGAG+GGG | - | chr7_1:38001288-38001307 | None:intergenic | 35.0% |
| ! | AGAAATGGTGGGGTTTAAAA+GGG | - | chr7_1:38001304-38001323 | None:intergenic | 35.0% |
| TATCTATGAAAGGCCAATGA+TGG | - | chr7_1:38001373-38001392 | None:intergenic | 35.0% | |
| !! | TCATTGGCCTTTCATAGATA+AGG | + | chr7_1:38001373-38001392 | Msa1018130:intron | 35.0% |
| !! | CATTGGCCTTTCATAGATAA+GGG | + | chr7_1:38001374-38001393 | Msa1018130:intron | 35.0% |
| ACTTTCAGGGTTTGTATGAA+CGG | + | chr7_1:38001408-38001427 | Msa1018130:intron | 35.0% | |
| CTTGGTTATTGGAGGAAAAT+CGG | - | chr7_1:38001595-38001614 | None:intergenic | 35.0% | |
| TATGTCCTATCACATAGCAA+TGG | + | chr7_1:38001622-38001641 | Msa1018130:intron | 35.0% | |
| TAGTATTCCTCAGATGTTTC+TGG | - | chr7_1:38001887-38001906 | None:intergenic | 35.0% | |
| GGAATACTAACAATACGTTC+CGG | + | chr7_1:38001898-38001917 | Msa1018130:intron | 35.0% | |
| CCTGGCCAAATTGAATAAAT+TGG | - | chr7_1:38002108-38002127 | None:intergenic | 35.0% | |
| CCAATTTATTCAATTTGGCC+AGG | + | chr7_1:38002105-38002124 | Msa1018130:intron | 35.0% | |
| ATATGTCTAAAGACTCCAGA+TGG | + | chr7_1:38002268-38002287 | Msa1018130:CDS | 35.0% | |
| ! | AATTTCCATTTTGCACCATC+TGG | - | chr7_1:38002286-38002305 | None:intergenic | 35.0% |
| AAAAGAGTGATGGCAAGATA+TGG | + | chr7_1:38002314-38002333 | Msa1018130:CDS | 35.0% | |
| AGGTTTATTTCCTTGACCAT+TGG | - | chr7_1:38002503-38002522 | None:intergenic | 35.0% | |
| ! | TTGTTGGTGAAATTCAAAGG+AGG | - | chr7_1:38002572-38002591 | None:intergenic | 35.0% |
| TGCTTCCAATTTCACATTGT+TGG | - | chr7_1:38002588-38002607 | None:intergenic | 35.0% | |
| AAAACATGGAAAGTCGCAAA+AGG | + | chr7_1:38002618-38002637 | Msa1018130:CDS | 35.0% | |
| TATGTCTTCTTCATTGTGTC+AGG | + | chr7_1:38002685-38002704 | Msa1018130:intron | 35.0% | |
| !! | CACTTGTTTTCCTGCAAAAT+TGG | - | chr7_1:38002927-38002946 | None:intergenic | 35.0% |
| AATGTTTCTTTGCAGCTTAC+CGG | - | chr7_1:38003061-38003080 | None:intergenic | 35.0% | |
| GTAAGCTGCAAAGAAACATT+TGG | + | chr7_1:38003061-38003080 | Msa1018130:intron | 35.0% | |
| TGACAATTGGCTACATAATG+TGG | - | chr7_1:38003297-38003316 | None:intergenic | 35.0% | |
| CATTATGTAGCCAATTGTCA+CGG | + | chr7_1:38003297-38003316 | Msa1018130:intron | 35.0% | |
| TGTGTCTTACAAAACAAGGA+TGG | - | chr7_1:38003541-38003560 | None:intergenic | 35.0% | |
| ATTCAACTTCAGGTCTTGAA+TGG | + | chr7_1:38003589-38003608 | Msa1018130:CDS | 35.0% | |
| TTCAACTTCAGGTCTTGAAT+GGG | + | chr7_1:38003590-38003609 | Msa1018130:CDS | 35.0% | |
| AATTTGAACTCACAAGTGGA+TGG | + | chr7_1:38003662-38003681 | Msa1018130:CDS | 35.0% | |
| ! | GTTTCCTTGGAGAAGGTTTT+GGG | - | chr7_1:37999925-37999944 | None:intergenic | 40.0% |
| TTACAAGGTTTCCTTGGAGA+AGG | - | chr7_1:37999932-37999951 | None:intergenic | 40.0% | |
| AAAGGCTTACAAGGTTTCCT+TGG | - | chr7_1:37999938-37999957 | None:intergenic | 40.0% | |
| ! | TGCCATCATAAGGTGTTCTT+GGG | - | chr7_1:38000074-38000093 | None:intergenic | 40.0% |
| ! | ATGCCATCATAAGGTGTTCT+TGG | - | chr7_1:38000075-38000094 | None:intergenic | 40.0% |
| AAGACTCAGATGACAAGGTA+AGG | - | chr7_1:38000218-38000237 | None:intergenic | 40.0% | |
| GTTGAAAGACTCAGATGACA+AGG | - | chr7_1:38000223-38000242 | None:intergenic | 40.0% | |
| ! | ATTTAGGAGTGCAGTCCATT+AGG | - | chr7_1:38000282-38000301 | None:intergenic | 40.0% |
| TTCCAAAAATACCCTTGGTC+CGG | + | chr7_1:38000479-38000498 | Msa1018130:intron | 40.0% | |
| GAAAACAAAATCCGGACCAA+GGG | - | chr7_1:38000493-38000512 | None:intergenic | 40.0% | |
| !! | CTGGTTCGGAAAACAAAATC+CGG | - | chr7_1:38000501-38000520 | None:intergenic | 40.0% |
| TCCGGAAGTAACTAACAATC+TGG | - | chr7_1:38000520-38000539 | None:intergenic | 40.0% | |
| ACAAGCTGAAATGCTATTGC+AGG | + | chr7_1:38000554-38000573 | Msa1018130:intron | 40.0% | |
| CAAGCTGAAATGCTATTGCA+GGG | + | chr7_1:38000555-38000574 | Msa1018130:intron | 40.0% | |
| CTTGTGTGGGGTTCATATAA+CGG | - | chr7_1:38000750-38000769 | None:intergenic | 40.0% | |
| ATAGCATTTCAGCTTGTGTG+GGG | - | chr7_1:38000762-38000781 | None:intergenic | 40.0% | |
| CAATAGCATTTCAGCTTGTG+TGG | - | chr7_1:38000764-38000783 | None:intergenic | 40.0% | |
| ACAAGCTGAAATGCTATTGC+AGG | + | chr7_1:38000554-38000573 | Msa1018130:intron | 40.0% | |
| CAAGCTGAAATGCTATTGCA+GGG | + | chr7_1:38000555-38000574 | Msa1018130:intron | 40.0% | |
| AATGCTATTGCAGGGTTCAT+AGG | + | chr7_1:38000563-38000582 | Msa1018130:intron | 40.0% | |
| TATTGCAGGGTTCATAGGAA+TGG | + | chr7_1:38000779-38000798 | Msa1018130:intron | 40.0% | |
| !! | TAGTTTATTAGAGGTGTCGG+TGG | - | chr7_1:38000823-38000842 | None:intergenic | 40.0% |
| ACCGTCCAAACCCAAATTAA+AGG | + | chr7_1:38000978-38000997 | Msa1018130:intron | 40.0% | |
| !! | GCCTTTAATTTGGGTTTGGA+CGG | - | chr7_1:38000982-38001001 | None:intergenic | 40.0% |
| !! | GAGAGCCTTTAATTTGGGTT+TGG | - | chr7_1:38000986-38001005 | None:intergenic | 40.0% |
| ! | AATGCGATAATGGTGAACGA+GGG | - | chr7_1:38001089-38001108 | None:intergenic | 40.0% |
| ! | TAATGCGATAATGGTGAACG+AGG | - | chr7_1:38001090-38001109 | None:intergenic | 40.0% |
| GCATTCCGGATTGTATATTC+CGG | + | chr7_1:38001141-38001160 | Msa1018130:intron | 40.0% | |
| ! | GAGAAATGGTGGGGTTTAAA+AGG | - | chr7_1:38001305-38001324 | None:intergenic | 40.0% |
| ATGGTTGTAGAAGGAAGAAG+AGG | - | chr7_1:38001344-38001363 | None:intergenic | 40.0% | |
| TCTTCTTCCTTCTACAACCA+TGG | + | chr7_1:38001343-38001362 | Msa1018130:intron | 40.0% | |
| TGGAAAACCATGGTTGTAGA+AGG | - | chr7_1:38001353-38001372 | None:intergenic | 40.0% | |
| ! | CAACCATGGTTTTCCATCAT+TGG | + | chr7_1:38001357-38001376 | Msa1018130:intron | 40.0% |
| ! | AACCCTGAAAGTTTTCAACG+AGG | - | chr7_1:38001400-38001419 | None:intergenic | 40.0% |
| GTTTGTATGAACGGTCAATG+AGG | + | chr7_1:38001417-38001436 | Msa1018130:intron | 40.0% | |
| CATAGCAGTAGCTTGGTTAT+TGG | - | chr7_1:38001606-38001625 | None:intergenic | 40.0% | |
| CCTAACCATTGCTATGTGAT+AGG | - | chr7_1:38001630-38001649 | None:intergenic | 40.0% | |
| CCTATCACATAGCAATGGTT+AGG | + | chr7_1:38001627-38001646 | Msa1018130:intron | 40.0% | |
| CACATCAGGTACTTATCTAC+TGG | - | chr7_1:38002030-38002049 | None:intergenic | 40.0% | |
| GCTATGCCAAAATACACATC+AGG | - | chr7_1:38002044-38002063 | None:intergenic | 40.0% | |
| ! | AAAACACACCAGTTTGGGTT+GGG | - | chr7_1:38002066-38002085 | None:intergenic | 40.0% |
| TAAAACACACCAGTTTGGGT+TGG | - | chr7_1:38002067-38002086 | None:intergenic | 40.0% | |
| ! | AACCCAAACTGGTGTGTTTT+AGG | + | chr7_1:38002066-38002085 | Msa1018130:intron | 40.0% |
| AGCCTAAAACACACCAGTTT+GGG | - | chr7_1:38002071-38002090 | None:intergenic | 40.0% | |
| TAGCCTAAAACACACCAGTT+TGG | - | chr7_1:38002072-38002091 | None:intergenic | 40.0% | |
| GATGATGCCAAGAAAGTTTG+TGG | + | chr7_1:38002216-38002235 | Msa1018130:intron | 40.0% | |
| TGGCAAGATATGGTTTGAGA+AGG | + | chr7_1:38002324-38002343 | Msa1018130:CDS | 40.0% | |
| GGCAAGATATGGTTTGAGAA+GGG | + | chr7_1:38002325-38002344 | Msa1018130:CDS | 40.0% | |
| AGATATGGTTTGAGAAGGGT+TGG | + | chr7_1:38002329-38002348 | Msa1018130:CDS | 40.0% | |
| CAAAAGACTTGAAGCTCAGA+AGG | + | chr7_1:38002474-38002493 | Msa1018130:CDS | 40.0% | |
| CAAGGAAATAAACCTCCGAA+TGG | + | chr7_1:38002508-38002527 | Msa1018130:CDS | 40.0% | |
| ! | GCTCTACGATTTTCACCATT+CGG | - | chr7_1:38002526-38002545 | None:intergenic | 40.0% |
| CTCATGACAACAACAAAGGA+TGG | - | chr7_1:38003010-38003029 | None:intergenic | 40.0% | |
| TGCACTCATGACAACAACAA+AGG | - | chr7_1:38003014-38003033 | None:intergenic | 40.0% | |
| ACATGTGTCAATATCGGACA+CGG | - | chr7_1:38003200-38003219 | None:intergenic | 40.0% | |
| !! | TACATAATGTGGCACTGACA+CGG | - | chr7_1:38003286-38003305 | None:intergenic | 40.0% |
| GAGAGGAGATATTCAACTTC+AGG | + | chr7_1:38003579-38003598 | Msa1018130:CDS | 40.0% | |
| CATGGCTAGTGAAATTGCTG+AGG | + | chr7_1:37999866-37999885 | Msa1018130:CDS | 45.0% | |
| CTTACCCAAAACCTTCTCCA+AGG | + | chr7_1:37999918-37999937 | Msa1018130:CDS | 45.0% | |
| ! | GGTTTCCTTGGAGAAGGTTT+TGG | - | chr7_1:37999926-37999945 | None:intergenic | 45.0% |
| GTCCCAAGAACACCTTATGA+TGG | + | chr7_1:38000069-38000088 | Msa1018130:intron | 45.0% | |
| CTCAGATGACAAGGTAAGGT+AGG | - | chr7_1:38000214-38000233 | None:intergenic | 45.0% | |
| AATAAGGCCGAGTGAGACAA+CGG | - | chr7_1:38000336-38000355 | None:intergenic | 45.0% | |
| AGGCCCCAGAAATATCTCTA+AGG | + | chr7_1:38000388-38000407 | Msa1018130:intron | 45.0% | |
| ! | GGGCCTTAGAGATATTTCTG+GGG | - | chr7_1:38000394-38000413 | None:intergenic | 45.0% |
| GGGGCCTTAGAGATATTTCT+GGG | - | chr7_1:38000395-38000414 | None:intergenic | 45.0% | |
| !! | TATCTCTAAGGCCCCCAATA+CGG | + | chr7_1:38000400-38000419 | Msa1018130:intron | 45.0% |
| ATCCCGGAGTTATCCGTATT+GGG | - | chr7_1:38000416-38000435 | None:intergenic | 45.0% | |
| AATCCCGGAGTTATCCGTAT+TGG | - | chr7_1:38000417-38000436 | None:intergenic | 45.0% | |
| !!! | ATCCGGACCAAGGGTATTTT+TGG | - | chr7_1:38000484-38000503 | None:intergenic | 45.0% |
| GGAAAACAAAATCCGGACCA+AGG | - | chr7_1:38000494-38000513 | None:intergenic | 45.0% | |
| !!! | TAGTTTTTTAGGGGTGTCGG+TGG | - | chr7_1:38000612-38000631 | None:intergenic | 45.0% |
| AGAGGTGAAGTGAAGAATGG+AGG | + | chr7_1:38000869-38000888 | Msa1018130:intron | 45.0% | |
| ! | AATCCAATGCTGAAGCGTTC+CGG | + | chr7_1:38001015-38001034 | Msa1018130:intron | 45.0% |
| GAAAGTTGGCACTTCCTGTA+GGG | - | chr7_1:38001066-38001085 | None:intergenic | 45.0% | |
| ! | ATGCGATAATGGTGAACGAG+GGG | - | chr7_1:38001088-38001107 | None:intergenic | 45.0% |
| TACAATCCGGAATGCACCAT+TGG | - | chr7_1:38001136-38001155 | None:intergenic | 45.0% | |
| GCGTTCCGGAATATACAATC+CGG | - | chr7_1:38001149-38001168 | None:intergenic | 45.0% | |
| ACCACTGTCAAAAACGTGTG+GGG | - | chr7_1:38001196-38001215 | None:intergenic | 45.0% | |
| GACCACTGTCAAAAACGTGT+GGG | - | chr7_1:38001197-38001216 | None:intergenic | 45.0% | |
| TGACCACTGTCAAAAACGTG+TGG | - | chr7_1:38001198-38001217 | None:intergenic | 45.0% | |
| GGGGTGGGTAAAAAATGGTT+GGG | - | chr7_1:38001269-38001288 | None:intergenic | 45.0% | |
| AGGGGTGGGTAAAAAATGGT+TGG | - | chr7_1:38001270-38001289 | None:intergenic | 45.0% | |
| GAAAGGGATGGTGTGAGAAA+TGG | - | chr7_1:38001319-38001338 | None:intergenic | 45.0% | |
| GAAGGAAGAAGAGGAGGAAA+GGG | - | chr7_1:38001335-38001354 | None:intergenic | 45.0% | |
| AGAAGGAAGAAGAGGAGGAA+AGG | - | chr7_1:38001336-38001355 | None:intergenic | 45.0% | |
| GTTGTAGAAGGAAGAAGAGG+AGG | - | chr7_1:38001341-38001360 | None:intergenic | 45.0% | |
| ! | AGGCCAATGATGGAAAACCA+TGG | - | chr7_1:38001363-38001382 | None:intergenic | 45.0% |
| ACGAGGCCCTTATCTATGAA+AGG | - | chr7_1:38001383-38001402 | None:intergenic | 45.0% | |
| GGCCTCGTTGAAAACTTTCA+GGG | + | chr7_1:38001395-38001414 | Msa1018130:intron | 45.0% | |
| GTATGAACGGTCAATGAGGA+TGG | + | chr7_1:38001421-38001440 | Msa1018130:intron | 45.0% | |
| AATGAAGTGCGGTTCATCTG+AGG | + | chr7_1:38001455-38001474 | Msa1018130:intron | 45.0% | |
| ATGAAGTGCGGTTCATCTGA+GGG | + | chr7_1:38001456-38001475 | Msa1018130:intron | 45.0% | |
| GAAGAAACAAATGCCCCTGA+GGG | - | chr7_1:38001546-38001565 | None:intergenic | 45.0% | |
| AGAAGAAACAAATGCCCCTG+AGG | - | chr7_1:38001547-38001566 | None:intergenic | 45.0% | |
| TATTGGAGGAAAATCGGAGG+AGG | - | chr7_1:38001589-38001608 | None:intergenic | 45.0% | |
| GGTTATTGGAGGAAAATCGG+AGG | - | chr7_1:38001592-38001611 | None:intergenic | 45.0% | |
| AGCAGTAGCTTGGTTATTGG+AGG | - | chr7_1:38001603-38001622 | None:intergenic | 45.0% | |
| GATAGGACATAGCAGTAGCT+TGG | - | chr7_1:38001613-38001632 | None:intergenic | 45.0% | |
| ACGTTCCGGAATACGAAATC+CGG | + | chr7_1:38001912-38001931 | Msa1018130:intron | 45.0% | |
| ! | TTCCAATTTTACCCCTGGTC+CGG | - | chr7_1:38001934-38001953 | None:intergenic | 45.0% |
| AGACTCCAGATGGTGCAAAA+TGG | + | chr7_1:38002278-38002297 | Msa1018130:CDS | 45.0% | |
| ! | CTACGATTTTCACCATTCGG+AGG | - | chr7_1:38002523-38002542 | None:intergenic | 45.0% |
| ACATGGAAAGTCGCAAAAGG+TGG | + | chr7_1:38002621-38002640 | Msa1018130:CDS | 45.0% | |
| CGTTGAACACCACTTTCTTC+CGG | + | chr7_1:38003039-38003058 | Msa1018130:CDS | 45.0% | |
| ACACGGACATGTCTCTAACA+AGG | - | chr7_1:38003183-38003202 | None:intergenic | 45.0% | |
| AGGTCTTGAATGGGAGAGTT+TGG | + | chr7_1:38003599-38003618 | Msa1018130:CDS | 45.0% | |
| GGTCTGCTAGGTATTCTATC+AGG | + | chr7_1:38003620-38003639 | Msa1018130:CDS | 45.0% | |
| TCTATCAGGATGTGCGCTAA+AGG | + | chr7_1:38003634-38003653 | Msa1018130:CDS | 45.0% | |
| TGAACTCACAAGTGGATGGA+AGG | + | chr7_1:38003666-38003685 | Msa1018130:CDS | 45.0% | |
| !! | TGGATGGAAGGCATTTGCAA+AGG | + | chr7_1:38003678-38003697 | Msa1018130:CDS | 45.0% |
| !! | TTAATTAATTGAAATATTAT+AGG | + | chr7_1:38003370-38003389 | Msa1018130:intron | 5.0% |
| ATAAGGCCGAGTGAGACAAC+GGG | - | chr7_1:38000335-38000354 | None:intergenic | 50.0% | |
| GGGGGCCTTAGAGATATTTC+TGG | - | chr7_1:38000396-38000415 | None:intergenic | 50.0% | |
| TCCCGGAGTTATCCGTATTG+GGG | - | chr7_1:38000415-38000434 | None:intergenic | 50.0% | |
| AATCCGGAACGCTTCAGCAT+TGG | - | chr7_1:38001021-38001040 | None:intergenic | 50.0% | |
| CTGTAGGGCTAAGGACATTC+TGG | - | chr7_1:38001051-38001070 | None:intergenic | 50.0% | |
| CAGAATGTCCTTAGCCCTAC+AGG | + | chr7_1:38001049-38001068 | Msa1018130:intron | 50.0% | |
| GGAAAGTTGGCACTTCCTGT+AGG | - | chr7_1:38001067-38001086 | None:intergenic | 50.0% | |
| ATGGTGAACGAGGGGAAAGT+TGG | - | chr7_1:38001080-38001099 | None:intergenic | 50.0% | |
| !! | CGGAATGCACCATTGGTTTC+CGG | - | chr7_1:38001129-38001148 | None:intergenic | 50.0% |
| CGGAAACCAATGGTGCATTC+CGG | + | chr7_1:38001127-38001146 | Msa1018130:intron | 50.0% | |
| AGGGAGGGGTGGGTAAAAAA+TGG | - | chr7_1:38001274-38001293 | None:intergenic | 50.0% | |
| GGGTATTTATAGGGAGGGGT+GGG | - | chr7_1:38001284-38001303 | None:intergenic | 50.0% | |
| ! | AGGGTATTTATAGGGAGGGG+TGG | - | chr7_1:38001285-38001304 | None:intergenic | 50.0% |
| GGATGGTGTGAGAAATGGTG+GGG | - | chr7_1:38001314-38001333 | None:intergenic | 50.0% | |
| GGGATGGTGTGAGAAATGGT+GGG | - | chr7_1:38001315-38001334 | None:intergenic | 50.0% | |
| AGGGATGGTGTGAGAAATGG+TGG | - | chr7_1:38001316-38001335 | None:intergenic | 50.0% | |
| GAAGAAGAGGAGGAAAGGGA+TGG | - | chr7_1:38001331-38001350 | None:intergenic | 50.0% | |
| GGGCCTCGTTGAAAACTTTC+AGG | + | chr7_1:38001394-38001413 | Msa1018130:intron | 50.0% | |
| GGTTCATCTGAGGGTCATGT+GGG | + | chr7_1:38001465-38001484 | Msa1018130:intron | 50.0% | |
| GTTCTTAGCTTCGCCAGTCT+GGG | + | chr7_1:38001496-38001515 | Msa1018130:intron | 50.0% | |
| CTGGTCCGGATTTCGTATTC+CGG | - | chr7_1:38001920-38001939 | None:intergenic | 50.0% | |
| GGAATACGAAATCCGGACCA+GGG | + | chr7_1:38001919-38001938 | Msa1018130:intron | 50.0% | |
| GAATACGAAATCCGGACCAG+GGG | + | chr7_1:38001920-38001939 | Msa1018130:intron | 50.0% | |
| ATCCGGACCAGGGGTAAAAT+TGG | + | chr7_1:38001929-38001948 | Msa1018130:intron | 50.0% | |
| TTTGGCCAGGGGAATTTGTG+TGG | + | chr7_1:38002118-38002137 | Msa1018130:intron | 50.0% | |
| ! | GAGCATCACTCTCTAGCTCA+TGG | + | chr7_1:38002364-38002383 | Msa1018130:CDS | 50.0% |
| GAAGCTCAGAAGGTCTCCAA+TGG | + | chr7_1:38002484-38002503 | Msa1018130:CDS | 50.0% | |
| CAGAAGGTCTCCAATGGTCA+AGG | + | chr7_1:38002490-38002509 | Msa1018130:CDS | 50.0% | |
| TGCAGCTTACCGGAAGAAAG+TGG | - | chr7_1:38003051-38003070 | None:intergenic | 50.0% | |
| ATGGGAGAGTTTGGTCTGCT+AGG | + | chr7_1:38003608-38003627 | Msa1018130:CDS | 50.0% | |
| GTCCATCCCGTTGTCTCACT+CGG | + | chr7_1:38000326-38000345 | Msa1018130:intron | 55.0% | |
| GCCCCCAATACGGATAACTC+CGG | + | chr7_1:38000410-38000429 | Msa1018130:intron | 55.0% | |
| CCCGGAGTTATCCGTATTGG+GGG | - | chr7_1:38000414-38000433 | None:intergenic | 55.0% | |
| CCCCCAATACGGATAACTCC+GGG | + | chr7_1:38000411-38000430 | Msa1018130:intron | 55.0% | |
| !! | TAGAGGTGTCGGTGGTGTCA+TGG | - | chr7_1:38000815-38000834 | None:intergenic | 55.0% |
| TGGCACTTCCTGTAGGGCTA+AGG | - | chr7_1:38001060-38001079 | None:intergenic | 55.0% | |
| TCCGGAACGCATCAGTGTCA+TGG | + | chr7_1:38001159-38001178 | Msa1018130:intron | 55.0% | |
| GCCATGACACTGATGCGTTC+CGG | - | chr7_1:38001163-38001182 | None:intergenic | 55.0% | |
| GAACGCATCAGTGTCATGGC+CGG | + | chr7_1:38001163-38001182 | Msa1018130:intron | 55.0% | |
| ! | GCCCCACACGTTTTTGACAG+TGG | + | chr7_1:38001192-38001211 | Msa1018130:intron | 55.0% |
| AACCGCGCTGCAATGAAGTG+CGG | + | chr7_1:38001444-38001463 | Msa1018130:intron | 55.0% | |
| AACCGCACTTCATTGCAGCG+CGG | - | chr7_1:38001449-38001468 | None:intergenic | 55.0% | |
| CGGTTCATCTGAGGGTCATG+TGG | + | chr7_1:38001464-38001483 | Msa1018130:intron | 55.0% | |
| GGTTCTTAGCTTCGCCAGTC+TGG | + | chr7_1:38001495-38001514 | Msa1018130:intron | 55.0% | |
| AAATGCCCCTGAGGGATGTG+GGG | - | chr7_1:38001538-38001557 | None:intergenic | 55.0% | |
| CAAATGCCCCTGAGGGATGT+GGG | - | chr7_1:38001539-38001558 | None:intergenic | 55.0% | |
| ACAAATGCCCCTGAGGGATG+TGG | - | chr7_1:38001540-38001559 | None:intergenic | 55.0% | |
| AAATCGGAGGAGGAGGGAAG+AGG | - | chr7_1:38001579-38001598 | None:intergenic | 55.0% | |
| GGAGGAAAATCGGAGGAGGA+GGG | - | chr7_1:38001585-38001604 | None:intergenic | 55.0% | |
| TGGAGGAAAATCGGAGGAGG+AGG | - | chr7_1:38001586-38001605 | None:intergenic | 55.0% | |
| CGGAATACGAAATCCGGACC+AGG | + | chr7_1:38001918-38001937 | Msa1018130:intron | 55.0% | |
| GGAAAAAAATAGGGCGCGCG+AGG | + | chr7_1:38001950-38001969 | Msa1018130:intron | 55.0% | |
| CGCGAGGAAAGACATAGGGT+GGG | + | chr7_1:38001966-38001985 | Msa1018130:intron | 55.0% | |
| TGGCATAGCCCAACCCAAAC+TGG | + | chr7_1:38002055-38002074 | Msa1018130:intron | 55.0% | |
| CAGCTCCACACAAATTCCCC+TGG | - | chr7_1:38002126-38002145 | None:intergenic | 55.0% | |
| ! | TTTTTGCAGGGCGCGCGAGA+AGG | - | chr7_1:38000459-38000478 | None:intergenic | 60.0% |
| !! | TAGGGGTGTCGGTGGTGTCA+TGG | - | chr7_1:38000604-38000623 | None:intergenic | 60.0% |
| AAACGTGTGGGGCAGACCAC+CGG | - | chr7_1:38001185-38001204 | None:intergenic | 60.0% | |
| GAGGGTCATGTGGGTCAGTG+TGG | + | chr7_1:38001474-38001493 | Msa1018130:intron | 60.0% | |
| GCTCAGACTTACGCCCAGAC+TGG | - | chr7_1:38001512-38001531 | None:intergenic | 60.0% | |
| AATGCCCCTGAGGGATGTGG+GGG | - | chr7_1:38001537-38001556 | None:intergenic | 60.0% | |
| GGCGCGCGAGGAAAGACATA+GGG | + | chr7_1:38001962-38001981 | Msa1018130:intron | 60.0% | |
| GCGCGAGGAAAGACATAGGG+TGG | + | chr7_1:38001965-38001984 | Msa1018130:intron | 60.0% | |
| GGCCGAGTGAGACAACGGGA+TGG | - | chr7_1:38000331-38000350 | None:intergenic | 65.0% | |
| CGCATCAGTGTCATGGCCGG+TGG | + | chr7_1:38001166-38001185 | Msa1018130:intron | 65.0% | |
| AGCACCCCCCACATCCCTCA+GGG | + | chr7_1:38001529-38001548 | Msa1018130:intron | 65.0% | |
| ATGCCCCTGAGGGATGTGGG+GGG | - | chr7_1:38001536-38001555 | None:intergenic | 65.0% | |
| AGGAGGAGGGAAGAGGAGGG+CGG | - | chr7_1:38001572-38001591 | None:intergenic | 65.0% | |
| CGGAGGAGGAGGGAAGAGGA+GGG | - | chr7_1:38001575-38001594 | None:intergenic | 65.0% | |
| TCGGAGGAGGAGGGAAGAGG+AGG | - | chr7_1:38001576-38001595 | None:intergenic | 65.0% | |
| GGGCGCGCGAGGAAAGACAT+AGG | + | chr7_1:38001961-38001980 | Msa1018130:intron | 65.0% | |
| CGCGCGAGAAGGCAGTAGGG+TGG | - | chr7_1:38000448-38000467 | None:intergenic | 70.0% | |
| GGGCGCGCGAGAAGGCAGTA+GGG | - | chr7_1:38000451-38000470 | None:intergenic | 70.0% | |
| AGGGCGCGCGAGAAGGCAGT+AGG | - | chr7_1:38000452-38000471 | None:intergenic | 70.0% | |
| GAGCACCCCCCACATCCCTC+AGG | + | chr7_1:38001528-38001547 | Msa1018130:intron | 70.0% | |
| GCACCCCCCACATCCCTCAG+GGG | + | chr7_1:38001530-38001549 | Msa1018130:intron | 70.0% | |
| GGAGGAGGGAAGAGGAGGGC+GGG | - | chr7_1:38001571-38001590 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 37999861 | 38003837 | 37999861 | ID=Msa1018130;Name=Msa1018130 |
| chr7_1 | mRNA | 37999861 | 38003837 | 37999861 | ID=Msa1018130-mRNA-1;Parent=Msa1018130;Name=Msa1018130-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|0.66|0.75|4|0|324 |
| chr7_1 | exon | 37999861 | 37999947 | 37999861 | ID=Msa1018130-mRNA-1:exon:7323;Parent=Msa1018130-mRNA-1 |
| chr7_1 | exon | 38002217 | 38002673 | 38002217 | ID=Msa1018130-mRNA-1:exon:7324;Parent=Msa1018130-mRNA-1 |
| chr7_1 | exon | 38002936 | 38003060 | 38002936 | ID=Msa1018130-mRNA-1:exon:7325;Parent=Msa1018130-mRNA-1 |
| chr7_1 | exon | 38003532 | 38003837 | 38003532 | ID=Msa1018130-mRNA-1:exon:7326;Parent=Msa1018130-mRNA-1 |
| chr7_1 | CDS | 37999861 | 37999947 | 37999861 | ID=Msa1018130-mRNA-1:cds;Parent=Msa1018130-mRNA-1 |
| chr7_1 | CDS | 38002217 | 38002673 | 38002217 | ID=Msa1018130-mRNA-1:cds;Parent=Msa1018130-mRNA-1 |
| chr7_1 | CDS | 38002936 | 38003060 | 38002936 | ID=Msa1018130-mRNA-1:cds;Parent=Msa1018130-mRNA-1 |
| chr7_1 | CDS | 38003532 | 38003837 | 38003532 | ID=Msa1018130-mRNA-1:cds;Parent=Msa1018130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
