Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018240 | ABD32483.2 | 73.464 | 358 | 44 | 4 | 60 | 404 | 4 | 323 | 2.10e-178 | 510 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018240 | sp|Q8L3W1|VRN1_ARATH | 41.414 | 99 | 58 | 0 | 74 | 172 | 6 | 104 | 2.93e-19 | 91.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018240 | Q2HSK0 | 73.464 | 358 | 44 | 4 | 60 | 404 | 4 | 323 | 1.00e-178 | 510 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1018240 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018240 | MtrunA17_Chr7g0233561 | 73.464 | 358 | 44 | 4 | 60 | 404 | 4 | 323 | 0.0 | 510 |
| Msa1018240 | MtrunA17_Chr3g0131891 | 59.437 | 355 | 87 | 3 | 61 | 404 | 6 | 314 | 4.80e-141 | 405 |
| Msa1018240 | MtrunA17_Chr7g0233541 | 59.639 | 332 | 79 | 7 | 89 | 405 | 1 | 292 | 1.29e-124 | 362 |
| Msa1018240 | MtrunA17_Chr7g0233531 | 60.923 | 325 | 63 | 5 | 89 | 402 | 1 | 272 | 2.80e-119 | 348 |
| Msa1018240 | MtrunA17_Chr7g0233521 | 56.923 | 325 | 76 | 6 | 89 | 402 | 1 | 272 | 3.31e-112 | 330 |
| Msa1018240 | MtrunA17_Chr7g0233571 | 50.000 | 252 | 83 | 4 | 68 | 315 | 4 | 216 | 6.36e-72 | 224 |
| Msa1018240 | MtrunA17_Chr8g0390841 | 33.538 | 325 | 168 | 9 | 72 | 391 | 37 | 318 | 1.46e-48 | 172 |
| Msa1018240 | MtrunA17_Chr1g0208771 | 33.333 | 318 | 164 | 13 | 82 | 395 | 8 | 281 | 4.70e-41 | 151 |
| Msa1018240 | MtrunA17_Chr1g0163071 | 33.225 | 307 | 166 | 9 | 89 | 390 | 1 | 273 | 1.56e-39 | 143 |
| Msa1018240 | MtrunA17_Chr3g0103151 | 53.398 | 103 | 46 | 1 | 71 | 173 | 9 | 109 | 1.23e-32 | 120 |
| Msa1018240 | MtrunA17_Chr3g0103191 | 51.456 | 103 | 48 | 1 | 71 | 173 | 9 | 109 | 3.73e-31 | 119 |
| Msa1018240 | MtrunA17_Chr3g0103181 | 50.485 | 103 | 49 | 1 | 71 | 173 | 9 | 109 | 8.18e-29 | 114 |
| Msa1018240 | MtrunA17_Chr5g0419201 | 47.475 | 99 | 52 | 0 | 74 | 172 | 16 | 114 | 3.33e-28 | 109 |
| Msa1018240 | MtrunA17_Chr1g0163181 | 28.896 | 308 | 173 | 10 | 88 | 393 | 19 | 282 | 8.51e-28 | 114 |
| Msa1018240 | MtrunA17_Chr3g0103171 | 27.508 | 309 | 164 | 12 | 90 | 395 | 6 | 257 | 2.39e-25 | 103 |
| Msa1018240 | MtrunA17_Chr4g0067431 | 28.660 | 321 | 191 | 11 | 72 | 390 | 13 | 297 | 7.39e-25 | 103 |
| Msa1018240 | MtrunA17_Chr1g0163261 | 28.267 | 329 | 170 | 10 | 71 | 394 | 6 | 273 | 5.69e-23 | 98.2 |
| Msa1018240 | MtrunA17_Chr1g0163221 | 26.748 | 329 | 178 | 10 | 68 | 390 | 5 | 276 | 9.37e-23 | 98.6 |
| Msa1018240 | MtrunA17_Chr1g0171611 | 44.660 | 103 | 55 | 1 | 71 | 173 | 6 | 106 | 3.35e-21 | 92.8 |
| Msa1018240 | MtrunA17_Chr1g0154111 | 25.904 | 332 | 228 | 6 | 72 | 392 | 24 | 348 | 4.05e-21 | 95.5 |
| Msa1018240 | MtrunA17_Chr1g0154041 | 25.595 | 336 | 229 | 8 | 69 | 391 | 11 | 338 | 1.92e-20 | 93.6 |
| Msa1018240 | MtrunA17_Chr1g0163231 | 43.689 | 103 | 56 | 1 | 71 | 173 | 6 | 106 | 2.86e-20 | 90.5 |
| Msa1018240 | MtrunA17_Chr6g0467351 | 39.252 | 107 | 64 | 1 | 72 | 177 | 13 | 119 | 1.01e-18 | 84.7 |
| Msa1018240 | MtrunA17_Chr1g0163131 | 26.284 | 331 | 197 | 11 | 67 | 394 | 11 | 297 | 1.14e-18 | 85.9 |
| Msa1018240 | MtrunA17_Chr1g0163251 | 47.000 | 100 | 47 | 2 | 74 | 173 | 9 | 102 | 1.52e-18 | 86.7 |
| Msa1018240 | MtrunA17_Chr1g0163101 | 41.739 | 115 | 64 | 2 | 70 | 184 | 13 | 124 | 1.81e-18 | 82.8 |
| Msa1018240 | MtrunA17_Chr1g0154171 | 22.985 | 335 | 222 | 8 | 72 | 392 | 21 | 333 | 2.15e-18 | 85.9 |
| Msa1018240 | MtrunA17_Chr1g0162441 | 38.384 | 99 | 61 | 0 | 74 | 172 | 7 | 105 | 3.21e-18 | 86.3 |
| Msa1018240 | MtrunA17_Chr1g0162441 | 33.333 | 114 | 70 | 2 | 278 | 391 | 272 | 379 | 5.99e-11 | 63.9 |
| Msa1018240 | MtrunA17_Chr4g0033961 | 35.354 | 99 | 64 | 0 | 74 | 172 | 6 | 104 | 1.90e-17 | 84.0 |
| Msa1018240 | MtrunA17_Chr1g0163121 | 48.837 | 86 | 41 | 2 | 88 | 173 | 9 | 91 | 5.01e-17 | 77.4 |
| Msa1018240 | MtrunA17_Chr1g0163241 | 45.238 | 84 | 44 | 1 | 90 | 173 | 23 | 104 | 7.72e-17 | 77.8 |
| Msa1018240 | MtrunA17_Chr1g0154151 | 23.780 | 328 | 192 | 7 | 83 | 392 | 16 | 303 | 8.80e-17 | 80.9 |
| Msa1018240 | MtrunA17_Chr3g0077461 | 34.091 | 132 | 85 | 1 | 59 | 190 | 224 | 353 | 3.63e-16 | 80.1 |
| Msa1018240 | MtrunA17_Chr3g0077461 | 30.137 | 146 | 86 | 3 | 79 | 213 | 13 | 153 | 5.65e-15 | 76.3 |
| Msa1018240 | MtrunA17_Chr1g0163191 | 42.857 | 91 | 50 | 1 | 83 | 173 | 14 | 102 | 3.70e-16 | 75.5 |
| Msa1018240 | MtrunA17_Chr3g0077411 | 30.303 | 132 | 88 | 1 | 57 | 188 | 8 | 135 | 5.39e-16 | 79.7 |
| Msa1018240 | MtrunA17_Chr3g0077411 | 31.852 | 135 | 88 | 2 | 60 | 190 | 245 | 379 | 9.61e-16 | 79.0 |
| Msa1018240 | MtrunA17_Chr3g0077451 | 33.010 | 103 | 69 | 0 | 88 | 190 | 10 | 112 | 8.01e-16 | 76.6 |
| Msa1018240 | MtrunA17_Chr1g0163141 | 45.349 | 86 | 44 | 2 | 88 | 173 | 9 | 91 | 2.80e-15 | 73.9 |
| Msa1018240 | MtrunA17_Chr1g0163201 | 43.678 | 87 | 47 | 1 | 87 | 173 | 16 | 100 | 3.35e-15 | 76.6 |
| Msa1018240 | MtrunA17_Chr1g0154161 | 34.426 | 122 | 77 | 2 | 72 | 190 | 28 | 149 | 4.03e-15 | 75.9 |
| Msa1018240 | MtrunA17_Chr1g0162411 | 36.275 | 102 | 65 | 0 | 74 | 175 | 7 | 108 | 1.23e-14 | 75.5 |
| Msa1018240 | MtrunA17_Chr1g0154101 | 36.957 | 92 | 58 | 0 | 72 | 163 | 23 | 114 | 2.12e-14 | 75.1 |
| Msa1018240 | MtrunA17_Chr1g0154101 | 30.935 | 139 | 92 | 2 | 40 | 174 | 145 | 283 | 6.22e-13 | 70.9 |
| Msa1018240 | MtrunA17_Chr1g0163061 | 37.037 | 108 | 61 | 2 | 72 | 175 | 13 | 117 | 3.41e-14 | 72.4 |
| Msa1018240 | MtrunA17_Chr3g0077361 | 31.013 | 158 | 96 | 5 | 57 | 208 | 26 | 176 | 3.59e-14 | 73.9 |
| Msa1018240 | MtrunA17_Chr1g0154211 | 36.957 | 92 | 57 | 1 | 72 | 163 | 21 | 111 | 4.35e-14 | 73.6 |
| Msa1018240 | MtrunA17_Chr1g0154251 | 38.542 | 96 | 57 | 2 | 72 | 166 | 25 | 119 | 5.10e-14 | 73.6 |
| Msa1018240 | MtrunA17_Chr3g0077381 | 33.036 | 112 | 70 | 2 | 88 | 198 | 34 | 141 | 6.24e-14 | 73.2 |
| Msa1018240 | MtrunA17_Chr3g0077381 | 29.661 | 118 | 83 | 0 | 73 | 190 | 246 | 363 | 8.85e-11 | 63.5 |
| Msa1018240 | MtrunA17_Chr5g0429931 | 33.721 | 86 | 57 | 0 | 90 | 175 | 11 | 96 | 7.53e-14 | 70.9 |
| Msa1018240 | MtrunA17_Chr4g0009491 | 30.952 | 126 | 78 | 3 | 88 | 208 | 11 | 132 | 2.93e-13 | 70.9 |
| Msa1018240 | MtrunA17_Chr4g0009491 | 30.508 | 118 | 82 | 0 | 73 | 190 | 224 | 341 | 1.33e-12 | 68.9 |
| Msa1018240 | MtrunA17_Chr1g0154131 | 31.325 | 166 | 99 | 3 | 73 | 233 | 20 | 175 | 3.90e-13 | 70.9 |
| Msa1018240 | MtrunA17_Chr1g0154131 | 31.200 | 125 | 83 | 1 | 42 | 163 | 147 | 271 | 4.25e-12 | 67.8 |
| Msa1018240 | MtrunA17_Chr1g0154071 | 28.472 | 144 | 92 | 3 | 55 | 188 | 130 | 272 | 5.29e-13 | 70.5 |
| Msa1018240 | MtrunA17_Chr1g0154071 | 30.894 | 123 | 78 | 3 | 72 | 193 | 26 | 142 | 4.45e-11 | 64.3 |
| Msa1018240 | MtrunA17_Chr1g0154191 | 34.615 | 104 | 67 | 1 | 72 | 174 | 20 | 123 | 5.52e-13 | 69.7 |
| Msa1018240 | MtrunA17_Chr1g0162161 | 40.625 | 96 | 54 | 2 | 89 | 184 | 3 | 95 | 8.36e-13 | 65.9 |
| Msa1018240 | MtrunA17_Chr1g0154241 | 32.990 | 97 | 64 | 1 | 72 | 168 | 20 | 115 | 4.84e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018240 | AT3G18990.1 | 41.414 | 99 | 58 | 0 | 74 | 172 | 6 | 104 | 2.98e-20 | 91.7 |
| Msa1018240 | AT3G18990.2 | 41.414 | 99 | 58 | 0 | 74 | 172 | 6 | 104 | 5.65e-20 | 91.3 |
| Msa1018240 | AT1G49475.1 | 40.000 | 105 | 62 | 1 | 74 | 178 | 34 | 137 | 8.21e-20 | 87.0 |
| Msa1018240 | AT4G01580.1 | 39.423 | 104 | 63 | 0 | 74 | 177 | 30 | 133 | 3.45e-19 | 85.5 |
| Msa1018240 | AT3G18960.2 | 31.928 | 166 | 97 | 2 | 55 | 204 | 11 | 176 | 6.62e-19 | 84.7 |
| Msa1018240 | AT3G18960.1 | 36.585 | 123 | 78 | 0 | 55 | 177 | 11 | 133 | 8.68e-19 | 84.7 |
| Msa1018240 | AT4G33280.1 | 26.257 | 358 | 210 | 14 | 58 | 405 | 5 | 318 | 4.05e-18 | 85.1 |
| Msa1018240 | AT3G18960.3 | 43.182 | 88 | 50 | 0 | 90 | 177 | 9 | 96 | 2.77e-16 | 76.6 |
| Msa1018240 | AT4G33280.3 | 33.913 | 115 | 71 | 3 | 58 | 168 | 5 | 118 | 6.24e-11 | 64.3 |
Find 73 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGATTTGTACCTCAAATT+TGG | 0.180864 | 7_1:+38186393 | None:intergenic |
| TGCAAAATGGAAATTAAATT+TGG | 0.185593 | 7_1:-38186521 | Msa1018240:CDS |
| TTTCATCGACAATGTGAAAT+TGG | 0.216786 | 7_1:-38186232 | Msa1018240:CDS |
| AGCAGTAGTTGTGTAAAATT+TGG | 0.230825 | 7_1:-38186208 | Msa1018240:CDS |
| AAATTTGAGGTACAAATCTT+TGG | 0.253897 | 7_1:-38186391 | Msa1018240:CDS |
| CGCCTTGACACCTTAATATC+AGG | 0.276595 | 7_1:+38188649 | None:intergenic |
| GAGTGGTTTCCCTGATATTA+AGG | 0.295698 | 7_1:-38188659 | Msa1018240:CDS |
| GTCTCTAGACATATAGCTTT+TGG | 0.313968 | 7_1:+38186553 | None:intergenic |
| CATATTTGACGATAATCTTC+GGG | 0.329018 | 7_1:+38185907 | None:intergenic |
| GAGGAAAGGCTAAGCGAAAA+AGG | 0.335330 | 7_1:+38188539 | None:intergenic |
| AGACTCCAAATGGTGCAAAA+TGG | 0.357064 | 7_1:-38186534 | Msa1018240:CDS |
| GAGAGGAGATATTCAACTTC+AGG | 0.365011 | 7_1:-38185217 | Msa1018240:CDS |
| TACGTCTTCTTCATTGTGTC+AGG | 0.377119 | 7_1:-38186128 | Msa1018240:CDS |
| TTCAACTTCAGGTGTTGAAT+AGG | 0.383926 | 7_1:-38185206 | Msa1018240:CDS |
| AGGTGTTGAATAGGAGAGTT+TGG | 0.384492 | 7_1:-38185197 | Msa1018240:CDS |
| CGTTGAACACCACTTTCTTC+CGG | 0.401759 | 7_1:-38185755 | Msa1018240:intron |
| GACGTAAAATCGTATACCTT+TGG | 0.411964 | 7_1:+38186145 | None:intergenic |
| AAAGGCTTACAAGGTTTCCT+TGG | 0.416023 | 7_1:+38187242 | None:intergenic |
| ACATATTTGACGATAATCTT+CGG | 0.422685 | 7_1:+38185906 | None:intergenic |
| CAATGAGTGATGGCAAGATA+TGG | 0.428994 | 7_1:-38186498 | Msa1018240:CDS |
| AATCTTTGGAAAGAGTGCTT+TGG | 0.429279 | 7_1:-38186377 | Msa1018240:CDS |
| GATGATGCCAAGAAAGTTTG+TGG | 0.433802 | 7_1:-38186596 | Msa1018240:CDS |
| GTCCGTGCTTGCTGTCATGC+TGG | 0.438153 | 7_1:-38188571 | Msa1018240:CDS |
| TCCATCCTTTGTTGTTGTCA+TGG | 0.443657 | 7_1:-38185788 | Msa1018240:CDS |
| GCTTTGGTTGCTTCCACTTG+TGG | 0.445943 | 7_1:+38188615 | None:intergenic |
| CCATCCTTTGTTGTTGTCAT+GGG | 0.446533 | 7_1:-38185787 | Msa1018240:CDS |
| GAGTTGAATGACCAAAGCTT+TGG | 0.473300 | 7_1:+38188599 | None:intergenic |
| GGTCTGCTAGGTACTCTATC+AGG | 0.476846 | 7_1:-38185176 | Msa1018240:CDS |
| AGTGGAAGCAACCAAAGCTT+TGG | 0.479940 | 7_1:-38188610 | Msa1018240:CDS |
| AGATATGGTTTGAGAAGGGT+TGG | 0.481735 | 7_1:-38186483 | Msa1018240:CDS |
| TCTATCAGGATGTGCGCTAA+AGG | 0.492943 | 7_1:-38185162 | Msa1018240:CDS |
| AAGGACAATAACTTGAAAGT+TGG | 0.499244 | 7_1:-38185099 | Msa1018240:CDS |
| AGGTTTATTTCCTTGACCAT+TGG | 0.507461 | 7_1:+38186312 | None:intergenic |
| ATTGTAGAGCAGCTCAAAAG+AGG | 0.511221 | 7_1:-38186276 | Msa1018240:CDS |
| CAAGGAAATAAACCTCCAAA+TGG | 0.511352 | 7_1:-38186304 | Msa1018240:CDS |
| TTAAATTTGGCAATGAGTGA+TGG | 0.512239 | 7_1:-38186508 | Msa1018240:CDS |
| TTACAAGGTTTCCTTGGAGA+AGG | 0.514232 | 7_1:+38187248 | None:intergenic |
| GCATGACAGCAAGCACGGAC+TGG | 0.517528 | 7_1:+38188574 | None:intergenic |
| GGTGTCAAGGCGGTCGAAGA+AGG | 0.518592 | 7_1:-38188638 | Msa1018240:CDS |
| ATAGGAGAGTTTGGTCTGCT+AGG | 0.518856 | 7_1:-38185188 | Msa1018240:CDS |
| TTTGCAGAGCATCACTCTCT+AGG | 0.540785 | 7_1:-38186454 | Msa1018240:CDS |
| TGGCAAGATATGGTTTGAGA+AGG | 0.555350 | 7_1:-38186488 | Msa1018240:CDS |
| TGCCAGCATGACAGCAAGCA+CGG | 0.564642 | 7_1:+38188569 | None:intergenic |
| GAAGATATGAAGGAGGAGAG+TGG | 0.566048 | 7_1:-38188676 | None:intergenic |
| CTAAAATTTGAACTCACAAG+TGG | 0.566527 | 7_1:-38185138 | Msa1018240:CDS |
| TGAACTCACAAGTGGATGGA+AGG | 0.567593 | 7_1:-38185130 | Msa1018240:CDS |
| CCCATGACAACAACAAAGGA+TGG | 0.571041 | 7_1:+38185787 | None:intergenic |
| TCAAATTGATATTCGTCCAA+AGG | 0.584086 | 7_1:-38186161 | Msa1018240:CDS |
| ATATGTCTAGAGACTCCAAA+TGG | 0.586498 | 7_1:-38186544 | Msa1018240:CDS |
| ACATTGTCGATGAAATTCAA+AGG | 0.588513 | 7_1:+38186240 | None:intergenic |
| TGCAGCTTACCGGAAGAAAG+TGG | 0.589285 | 7_1:+38185746 | None:intergenic |
| CGTAACAGTTGAAAGAGGAA+AGG | 0.595124 | 7_1:+38188525 | None:intergenic |
| ATTTGGAAAATCGCAGAAGG+TGG | 0.595133 | 7_1:-38186191 | Msa1018240:CDS |
| GAGCATCACTCTCTAGGTCA+TGG | 0.595626 | 7_1:-38186448 | Msa1018240:CDS |
| CATCTCGTAACAGTTGAAAG+AGG | 0.599218 | 7_1:+38188520 | None:intergenic |
| AATTTGAACTCACAAGTGGA+TGG | 0.599548 | 7_1:-38185134 | Msa1018240:CDS |
| TCCCTGATATTAAGGTGTCA+AGG | 0.600265 | 7_1:-38188651 | Msa1018240:CDS |
| TTTGATTTGAATAAGAAGAG+AGG | 0.602796 | 7_1:-38185234 | Msa1018240:CDS |
| GCCTTGACACCTTAATATCA+GGG | 0.605833 | 7_1:+38188650 | None:intergenic |
| CGGTCGAAGAAGGCCACAAG+TGG | 0.606234 | 7_1:-38188628 | Msa1018240:CDS |
| GGCAAGATATGGTTTGAGAA+GGG | 0.606783 | 7_1:-38186487 | Msa1018240:CDS |
| GTTACTCAAAACCTTCTCCA+AGG | 0.614774 | 7_1:-38187259 | Msa1018240:CDS |
| TGACAGCAAGCACGGACTGG+CGG | 0.617509 | 7_1:+38188577 | None:intergenic |
| CATAAATGAAGATATGAAGG+AGG | 0.626329 | 7_1:-38188683 | None:intergenic |
| AAAATTTGGAAAATCGCAGA+AGG | 0.630701 | 7_1:-38186194 | Msa1018240:CDS |
| TGGATGGAAGGCATTTGCAA+AGG | 0.640290 | 7_1:-38185118 | Msa1018240:CDS |
| TGTGTCTTACAAAACAAGGA+TGG | 0.644962 | 7_1:+38185258 | None:intergenic |
| AAAGTGTGTCTTACAAAACA+AGG | 0.647663 | 7_1:+38185254 | None:intergenic |
| TTGTCGATGAAATTCAAAGG+AGG | 0.673392 | 7_1:+38186243 | None:intergenic |
| ATATTTGACGATAATCTTCG+GGG | 0.677065 | 7_1:+38185908 | None:intergenic |
| TGCACCCATGACAACAACAA+AGG | 0.693553 | 7_1:+38185783 | None:intergenic |
| CATGGCTAGTGAAATTGCTG+AGG | 0.726199 | 7_1:-38187311 | Msa1018240:CDS |
| CTGATATTAAGGTGTCAAGG+CGG | 0.749052 | 7_1:-38188648 | Msa1018240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAAAAAGCATAAAAATA+AGG | + | chr7_1:38186762-38186781 | None:intergenic | 10.0% |
| !!! | ATATTATTTTACATTACTTT+AGG | + | chr7_1:38187041-38187060 | None:intergenic | 10.0% |
| !! | TTATATCATTCATATTAATA+TGG | - | chr7_1:38187065-38187084 | Msa1018240:intron | 10.0% |
| !!! | ATATTATCATTTTTATTTTC+TGG | - | chr7_1:38187644-38187663 | Msa1018240:intron | 10.0% |
| !! | AAAAAAAAAAAAAAACCAAA+GGG | + | chr7_1:38188377-38188396 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAACCAA+AGG | + | chr7_1:38188378-38188397 | None:intergenic | 10.0% |
| !! | GTAGATAAAAAATTATGAAT+GGG | + | chr7_1:38185892-38185911 | None:intergenic | 15.0% |
| !! | TGTAGATAAAAAATTATGAA+TGG | + | chr7_1:38185893-38185912 | None:intergenic | 15.0% |
| !!! | AGATTTTATGCTTTTATATT+AGG | - | chr7_1:38186359-38186378 | Msa1018240:CDS | 15.0% |
| !!! | GGTGTTTTTATTTTTATTTT+TGG | + | chr7_1:38188356-38188375 | None:intergenic | 15.0% |
| !!! | TTTTGTTTAAGCTTAAGATT+CGG | + | chr7_1:38185491-38185510 | None:intergenic | 20.0% |
| !!! | GTTGATAATAAAAAGATGTA+CGG | - | chr7_1:38186103-38186122 | Msa1018240:intron | 20.0% |
| !!! | ATAAAAAACAGTGTCAATTT+TGG | - | chr7_1:38186667-38186686 | Msa1018240:intron | 20.0% |
| !! | ATTCAATTGTTCTGTAATTT+AGG | + | chr7_1:38186714-38186733 | None:intergenic | 20.0% |
| !! | TGCAAAATGGAAATTAAATT+TGG | - | chr7_1:38187178-38187197 | Msa1018240:intron | 20.0% |
| !! | ATAAAAATAAAAACACCCTT+TGG | - | chr7_1:38188359-38188378 | Msa1018240:intron | 20.0% |
| ! | AAAAATTATGAATGGGATTG+TGG | + | chr7_1:38185885-38185904 | None:intergenic | 25.0% |
| ! | TTTCCATATTCCATGTTAAT+GGG | + | chr7_1:38186279-38186298 | None:intergenic | 25.0% |
| !! | TTTTATATTAGGCAAGATCA+TGG | - | chr7_1:38186370-38186389 | Msa1018240:CDS | 25.0% |
| ! | TAACTATGATCTTGAAAAAG+TGG | + | chr7_1:38186424-38186443 | None:intergenic | 25.0% |
| ! | AACATCAACAAAGAATCTAA+AGG | + | chr7_1:38186478-38186497 | None:intergenic | 25.0% |
| !!! | TTTTAAGAACGTTTCTCTTT+AGG | - | chr7_1:38186776-38186795 | Msa1018240:intron | 25.0% |
| !! | TCGATTACTTGTTAAAAACT+TGG | - | chr7_1:38186908-38186927 | Msa1018240:intron | 25.0% |
| !! | CGATTACTTGTTAAAAACTT+GGG | - | chr7_1:38186909-38186928 | Msa1018240:intron | 25.0% |
| ! | ATGGGACAAATTGAATAAAT+TGG | + | chr7_1:38186982-38187001 | None:intergenic | 25.0% |
| ! | TTTATTCAATTTGTCCCATT+TGG | - | chr7_1:38186983-38187002 | Msa1018240:intron | 25.0% |
| !! | TACATTACTTTAGGAAATAC+TGG | + | chr7_1:38187032-38187051 | None:intergenic | 25.0% |
| !! | TATTTTTCCACAAACTTTCT+TGG | + | chr7_1:38187113-38187132 | None:intergenic | 25.0% |
| ! | AGAAAGTTTGTGGAAAAATA+TGG | - | chr7_1:38187113-38187132 | Msa1018240:intron | 25.0% |
| ! | TTTGTGGAAAAATATGGAAA+AGG | - | chr7_1:38187119-38187138 | Msa1018240:intron | 25.0% |
| ! | TGAAAAAACTTCCAAATTTG+AGG | - | chr7_1:38187295-38187314 | Msa1018240:CDS | 25.0% |
| ! | AAAGATTTGTACCTCAAATT+TGG | + | chr7_1:38187309-38187328 | None:intergenic | 25.0% |
| !! | AAATTTGAGGTACAAATCTT+TGG | - | chr7_1:38187308-38187327 | Msa1018240:CDS | 25.0% |
| ! | GAATATAAAAAGTTCTCCAA+TGG | - | chr7_1:38187371-38187390 | Msa1018240:intron | 25.0% |
| !!! | TTTTATTTTCTGGAGTGTTA+AGG | - | chr7_1:38187654-38187673 | Msa1018240:intron | 25.0% |
| !!! | TTTATTTTCTGGAGTGTTAA+GGG | - | chr7_1:38187655-38187674 | Msa1018240:intron | 25.0% |
| ! | ACATATTTGACGATAATCTT+CGG | + | chr7_1:38187796-38187815 | None:intergenic | 25.0% |
| !! | TGCAAAATTGGAACATTTTA+AGG | + | chr7_1:38187820-38187839 | None:intergenic | 25.0% |
| !! | TTAAAATGTTCCAATTTTGC+AGG | - | chr7_1:38187819-38187838 | Msa1018240:intron | 25.0% |
| ! | AGTAGTCAACAACAATAAAA+AGG | - | chr7_1:38188006-38188025 | Msa1018240:intron | 25.0% |
| !! | CATTTGCATTTTCTATTGTT+TGG | - | chr7_1:38188409-38188428 | Msa1018240:intron | 25.0% |
| !!! | TTTGATTTGAATAAGAAGAG+AGG | - | chr7_1:38188465-38188484 | Msa1018240:intron | 25.0% |
| TCATTCAGATAGGAATGATT+CGG | + | chr7_1:38185533-38185552 | None:intergenic | 30.0% | |
| AAAAAGTAAACCGCATATCA+CGG | + | chr7_1:38186024-38186043 | None:intergenic | 30.0% | |
| TATCAACAATGCTACATGTA+GGG | + | chr7_1:38186090-38186109 | None:intergenic | 30.0% | |
| TTATCAACAATGCTACATGT+AGG | + | chr7_1:38186091-38186110 | None:intergenic | 30.0% | |
| CTTTCCATATTCCATGTTAA+TGG | + | chr7_1:38186280-38186299 | None:intergenic | 30.0% | |
| ATGATCTTGAAAAAGTGGAT+TGG | + | chr7_1:38186419-38186438 | None:intergenic | 30.0% | |
| AAAGAATCTAAAGGCTTACA+AGG | + | chr7_1:38186469-38186488 | None:intergenic | 30.0% | |
| !! | TCAATTTTGGTCAAACCTAA+TGG | - | chr7_1:38186680-38186699 | Msa1018240:intron | 30.0% |
| ! | AACAATTGAATCATTTTCGC+CGG | - | chr7_1:38186723-38186742 | Msa1018240:intron | 30.0% |
| TCCAGGAGTTAATTGTATTA+GGG | + | chr7_1:38186824-38186843 | None:intergenic | 30.0% | |
| TTCCAGGAGTTAATTGTATT+AGG | + | chr7_1:38186825-38186844 | None:intergenic | 30.0% | |
| TACCAGATTATGTTTATTCC+AGG | + | chr7_1:38186841-38186860 | None:intergenic | 30.0% | |
| TAACTACCTGATGTGTATTT+AGG | - | chr7_1:38186863-38186882 | Msa1018240:intron | 30.0% | |
| AAGAAACCTAAATACACATC+AGG | + | chr7_1:38186872-38186891 | None:intergenic | 30.0% | |
| ! | AATTTCCATTTTGCACCATT+TGG | + | chr7_1:38187173-38187192 | None:intergenic | 30.0% |
| TTAAATTTGGCAATGAGTGA+TGG | - | chr7_1:38187191-38187210 | Msa1018240:intron | 30.0% | |
| CATATCTAAAAAGCAGAAGA+TGG | + | chr7_1:38187277-38187296 | None:intergenic | 30.0% | |
| ACATTGTCGATGAAATTCAA+AGG | + | chr7_1:38187462-38187481 | None:intergenic | 30.0% | |
| TTTCATCGACAATGTGAAAT+TGG | - | chr7_1:38187467-38187486 | Msa1018240:intron | 30.0% | |
| AGCAGTAGTTGTGTAAAATT+TGG | - | chr7_1:38187491-38187510 | Msa1018240:intron | 30.0% | |
| AAAATTTGGAAAATCGCAGA+AGG | - | chr7_1:38187505-38187524 | Msa1018240:intron | 30.0% | |
| TCAAATTGATATTCGTCCAA+AGG | - | chr7_1:38187538-38187557 | Msa1018240:intron | 30.0% | |
| ATATTTGACGATAATCTTCG+GGG | + | chr7_1:38187794-38187813 | None:intergenic | 30.0% | |
| CATATTTGACGATAATCTTC+GGG | + | chr7_1:38187795-38187814 | None:intergenic | 30.0% | |
| ACATGTTTCAATATCGAACA+AGG | + | chr7_1:38188105-38188124 | None:intergenic | 30.0% | |
| ! | ATCAATTTTACCGTGACAAT+GGG | + | chr7_1:38188215-38188234 | None:intergenic | 30.0% |
| ! | AATCAATTTTACCGTGACAA+TGG | + | chr7_1:38188216-38188235 | None:intergenic | 30.0% |
| !! | TTTTTGGTGATCAAAAGACT+GGG | + | chr7_1:38188340-38188359 | None:intergenic | 30.0% |
| !!! | ATTTTTGGTGATCAAAAGAC+TGG | + | chr7_1:38188341-38188360 | None:intergenic | 30.0% |
| AAAGTGTGTCTTACAAAACA+AGG | + | chr7_1:38188448-38188467 | None:intergenic | 30.0% | |
| CTAAAATTTGAACTCACAAG+TGG | - | chr7_1:38188561-38188580 | Msa1018240:CDS | 30.0% | |
| AAGGACAATAACTTGAAAGT+TGG | - | chr7_1:38188600-38188619 | Msa1018240:CDS | 30.0% | |
| ! | TTTTCTTCAACGGGTGATAA+AGG | + | chr7_1:38185270-38185289 | None:intergenic | 35.0% |
| TGTTCTTTCATCAGCAAATG+TGG | + | chr7_1:38185309-38185328 | None:intergenic | 35.0% | |
| TGATGAAAGAACAGCAAGAA+CGG | - | chr7_1:38185316-38185335 | Msa1018240:intron | 35.0% | |
| ! | TTTTCTCATCCTTATCGTAC+GGG | + | chr7_1:38185408-38185427 | None:intergenic | 35.0% |
| ! | CTTTTCTCATCCTTATCGTA+CGG | + | chr7_1:38185409-38185428 | None:intergenic | 35.0% |
| GAGAGTGATTTAGTTAGGAA+AGG | - | chr7_1:38185445-38185464 | Msa1018240:intron | 35.0% | |
| TAAGCTTAAGATTCGGATTC+AGG | + | chr7_1:38185484-38185503 | None:intergenic | 35.0% | |
| CATTCAGATAGGAATGATTC+GGG | + | chr7_1:38185532-38185551 | None:intergenic | 35.0% | |
| ATTCCTATCTGAATGAGAAG+TGG | - | chr7_1:38185537-38185556 | Msa1018240:intron | 35.0% | |
| ! | TAGTTGTTGTATTGACGCTT+TGG | + | chr7_1:38185685-38185704 | None:intergenic | 35.0% |
| AGCGTCAATACAACAACTAA+AGG | - | chr7_1:38185686-38185705 | Msa1018240:intron | 35.0% | |
| TGACCTTTGGATTCTTAAGT+AGG | - | chr7_1:38185709-38185728 | Msa1018240:intron | 35.0% | |
| GACCTTTGGATTCTTAAGTA+GGG | - | chr7_1:38185710-38185729 | Msa1018240:intron | 35.0% | |
| ACCTTTGGATTCTTAAGTAG+GGG | - | chr7_1:38185711-38185730 | Msa1018240:intron | 35.0% | |
| GGATATATAGCAAAGCTCTT+TGG | - | chr7_1:38185962-38185981 | Msa1018240:intron | 35.0% | |
| GGTGAAAATCGACTAATTCT+TGG | - | chr7_1:38185983-38186002 | Msa1018240:intron | 35.0% | |
| ACAACACTACTGAAATTTCC+TGG | - | chr7_1:38186054-38186073 | Msa1018240:intron | 35.0% | |
| !! | ATGTAGGGAATTTGTTTTCC+AGG | + | chr7_1:38186075-38186094 | None:intergenic | 35.0% |
| TTCTACTTGATCGAATCTCA+AGG | + | chr7_1:38186203-38186222 | None:intergenic | 35.0% | |
| !! | TGGTTTGCTTGCTCAAAAAA+AGG | + | chr7_1:38186251-38186270 | None:intergenic | 35.0% |
| AACCAATCTTCCCATTAACA+TGG | - | chr7_1:38186266-38186285 | Msa1018240:CDS | 35.0% | |
| TTCCATGTTAATGGGAAGAT+TGG | + | chr7_1:38186271-38186290 | None:intergenic | 35.0% | |
| CTTCCCATTAACATGGAATA+TGG | - | chr7_1:38186273-38186292 | Msa1018240:CDS | 35.0% | |
| CGTAGTTCAATTATTCCTCT+TGG | - | chr7_1:38186301-38186320 | Msa1018240:CDS | 35.0% | |
| AATGAAGTTTAGATGCCAAG+AGG | + | chr7_1:38186319-38186338 | None:intergenic | 35.0% | |
| AGAAAAGAATAGAGAGGTTC+AGG | + | chr7_1:38186592-38186611 | None:intergenic | 35.0% | |
| CCTGTTAGAAAAGAATAGAG+AGG | + | chr7_1:38186598-38186617 | None:intergenic | 35.0% | |
| ! | CCTCTCTATTCTTTTCTAAC+AGG | - | chr7_1:38186595-38186614 | Msa1018240:CDS | 35.0% |
| CAGGAGTTAATTGTATTAGG+GGG | + | chr7_1:38186822-38186841 | None:intergenic | 35.0% | |
| CCAGGAGTTAATTGTATTAG+GGG | + | chr7_1:38186823-38186842 | None:intergenic | 35.0% | |
| CTCCTGGAATAAACATAATC+TGG | - | chr7_1:38186836-38186855 | Msa1018240:intron | 35.0% | |
| ! | GTCTCTAGACATATAGCTTT+TGG | + | chr7_1:38187149-38187168 | None:intergenic | 35.0% |
| ATATGTCTAGAGACTCCAAA+TGG | - | chr7_1:38187155-38187174 | Msa1018240:intron | 35.0% | |
| !! | AATCTTTGGAAAGAGTGCTT+TGG | - | chr7_1:38187322-38187341 | Msa1018240:intron | 35.0% |
| AAAAAGTTCTCCAATGGTCA+AGG | - | chr7_1:38187377-38187396 | Msa1018240:intron | 35.0% | |
| AGGTTTATTTCCTTGACCAT+TGG | + | chr7_1:38187390-38187409 | None:intergenic | 35.0% | |
| CAAGGAAATAAACCTCCAAA+TGG | - | chr7_1:38187395-38187414 | Msa1018240:intron | 35.0% | |
| ! | CTACAATTTTCACCATTTGG+AGG | + | chr7_1:38187410-38187429 | None:intergenic | 35.0% |
| ! | GCTCTACAATTTTCACCATT+TGG | + | chr7_1:38187413-38187432 | None:intergenic | 35.0% |
| TTGTCGATGAAATTCAAAGG+AGG | + | chr7_1:38187459-38187478 | None:intergenic | 35.0% | |
| GACGTAAAATCGTATACCTT+TGG | + | chr7_1:38187557-38187576 | None:intergenic | 35.0% | |
| TTTGCATCTCATGTTCTAGT+TGG | - | chr7_1:38187735-38187754 | Msa1018240:intron | 35.0% | |
| !! | CACTTGTTTTCCTGCAAAAT+TGG | + | chr7_1:38187832-38187851 | None:intergenic | 35.0% |
| AATGTTTCTTTGCAGCTTAC+CGG | + | chr7_1:38187966-38187985 | None:intergenic | 35.0% | |
| GTAAGCTGCAAAGAAACATT+TGG | - | chr7_1:38187966-38187985 | Msa1018240:intron | 35.0% | |
| TGTGTCTTACAAAACAAGGA+TGG | + | chr7_1:38188444-38188463 | None:intergenic | 35.0% | |
| !! | TTCAACTTCAGGTGTTGAAT+AGG | - | chr7_1:38188493-38188512 | Msa1018240:intron | 35.0% |
| AATTTGAACTCACAAGTGGA+TGG | - | chr7_1:38188565-38188584 | Msa1018240:CDS | 35.0% | |
| GAGTGGTTTCCCTGATATTA+AGG | - | chr7_1:38185040-38185059 | Msa1018240:CDS | 40.0% | |
| ! | TCCCTGATATTAAGGTGTCA+AGG | - | chr7_1:38185048-38185067 | Msa1018240:CDS | 40.0% |
| GCCTTGACACCTTAATATCA+GGG | + | chr7_1:38185052-38185071 | None:intergenic | 40.0% | |
| ! | CTGATATTAAGGTGTCAAGG+CGG | - | chr7_1:38185051-38185070 | Msa1018240:CDS | 40.0% |
| GAGTTGAATGACCAAAGCTT+TGG | + | chr7_1:38185103-38185122 | None:intergenic | 40.0% | |
| CGTAACAGTTGAAAGAGGAA+AGG | + | chr7_1:38185177-38185196 | None:intergenic | 40.0% | |
| CATCTCGTAACAGTTGAAAG+AGG | + | chr7_1:38185182-38185201 | None:intergenic | 40.0% | |
| GATAAAGGTAAGGTAAGGGA+TGG | + | chr7_1:38185255-38185274 | None:intergenic | 40.0% | |
| GGGTGATAAAGGTAAGGTAA+GGG | + | chr7_1:38185259-38185278 | None:intergenic | 40.0% | |
| TTCAACGGGTGATAAAGGTA+AGG | + | chr7_1:38185265-38185284 | None:intergenic | 40.0% | |
| ! | ACTGGTGGTCTTTTCTTCAA+CGG | + | chr7_1:38185280-38185299 | None:intergenic | 40.0% |
| GATGAAAGAACAGCAAGAAC+GGG | - | chr7_1:38185317-38185336 | Msa1018240:intron | 40.0% | |
| CGTACGATAAGGATGAGAAA+AGG | - | chr7_1:38185407-38185426 | Msa1018240:intron | 40.0% | |
| GAGGAGAGAGTGATTTAGTT+AGG | - | chr7_1:38185440-38185459 | Msa1018240:intron | 40.0% | |
| TTAAGATTCGGATTCAGGCT+GGG | + | chr7_1:38185479-38185498 | None:intergenic | 40.0% | |
| TCACCACTTCTCATTCAGAT+AGG | + | chr7_1:38185543-38185562 | None:intergenic | 40.0% | |
| AACACTAACTGAAAGCGACA+GGG | - | chr7_1:38185640-38185659 | Msa1018240:intron | 40.0% | |
| ATTGACGCTTTGGTTAGGAA+TGG | + | chr7_1:38185675-38185694 | None:intergenic | 40.0% | |
| ! | GTTGTATTGACGCTTTGGTT+AGG | + | chr7_1:38185680-38185699 | None:intergenic | 40.0% |
| CAACAACTAAAGGTGACCTT+TGG | - | chr7_1:38185696-38185715 | Msa1018240:intron | 40.0% | |
| TCCCCTACTTAAGAATCCAA+AGG | + | chr7_1:38185715-38185734 | None:intergenic | 40.0% | |
| TTCTTAAGTAGGGGACAAAG+AGG | - | chr7_1:38185720-38185739 | Msa1018240:intron | 40.0% | |
| TAATCCAAAGCCCATAACAC+TGG | - | chr7_1:38185913-38185932 | Msa1018240:CDS | 40.0% | |
| TATCCTCCTTGCATTTATGC+CGG | + | chr7_1:38185947-38185966 | None:intergenic | 40.0% | |
| GCCAAAAAAACCGTGATATG+CGG | - | chr7_1:38186011-38186030 | Msa1018240:intron | 40.0% | |
| !!! | ACCGCATATCACGGTTTTTT+TGG | + | chr7_1:38186015-38186034 | None:intergenic | 40.0% |
| GTTACTCAAAACCTTCTCCA+AGG | - | chr7_1:38186440-38186459 | Msa1018240:CDS | 40.0% | |
| TTACAAGGTTTCCTTGGAGA+AGG | + | chr7_1:38186454-38186473 | None:intergenic | 40.0% | |
| AAAGGCTTACAAGGTTTCCT+TGG | + | chr7_1:38186460-38186479 | None:intergenic | 40.0% | |
| AGAATAGAGAGGTTCAGGTA+AGG | + | chr7_1:38186587-38186606 | None:intergenic | 40.0% | |
| ! | ATTTAGGAGTGCAGTCCATT+AGG | + | chr7_1:38186698-38186717 | None:intergenic | 40.0% |
| ! | ATTGAATCATTTTCGCCGGT+TGG | - | chr7_1:38186727-38186746 | Msa1018240:intron | 40.0% |
| CCCCTAATACAATTAACTCC+TGG | - | chr7_1:38186820-38186839 | Msa1018240:intron | 40.0% | |
| ! | AAAACACACCAGTTTGGGTT+TGG | + | chr7_1:38186940-38186959 | None:intergenic | 40.0% |
| ! | AACCCAAACTGGTGTGTTTT+AGG | - | chr7_1:38186940-38186959 | Msa1018240:intron | 40.0% |
| AGCCTAAAACACACCAGTTT+GGG | + | chr7_1:38186945-38186964 | None:intergenic | 40.0% | |
| TAGCCTAAAACACACCAGTT+TGG | + | chr7_1:38186946-38186965 | None:intergenic | 40.0% | |
| TCAATTTGTCCCATTTGGCT+AGG | - | chr7_1:38186988-38187007 | Msa1018240:intron | 40.0% | |
| CAATTTGTCCCATTTGGCTA+GGG | - | chr7_1:38186989-38187008 | Msa1018240:intron | 40.0% | |
| AATTTGTCCCATTTGGCTAG+GGG | - | chr7_1:38186990-38187009 | Msa1018240:intron | 40.0% | |
| GATGATGCCAAGAAAGTTTG+TGG | - | chr7_1:38187103-38187122 | Msa1018240:intron | 40.0% | |
| AGACTCCAAATGGTGCAAAA+TGG | - | chr7_1:38187165-38187184 | Msa1018240:intron | 40.0% | |
| CAATGAGTGATGGCAAGATA+TGG | - | chr7_1:38187201-38187220 | Msa1018240:intron | 40.0% | |
| TGGCAAGATATGGTTTGAGA+AGG | - | chr7_1:38187211-38187230 | Msa1018240:intron | 40.0% | |
| GGCAAGATATGGTTTGAGAA+GGG | - | chr7_1:38187212-38187231 | Msa1018240:intron | 40.0% | |
| AGATATGGTTTGAGAAGGGT+TGG | - | chr7_1:38187216-38187235 | Msa1018240:intron | 40.0% | |
| ATTGTAGAGCAGCTCAAAAG+AGG | - | chr7_1:38187423-38187442 | Msa1018240:intron | 40.0% | |
| ATTTGGAAAATCGCAGAAGG+TGG | - | chr7_1:38187508-38187527 | Msa1018240:intron | 40.0% | |
| TACGTCTTCTTCATTGTGTC+AGG | - | chr7_1:38187571-38187590 | Msa1018240:intron | 40.0% | |
| !!! | TTTTCTGGAGTGTTAAGGGA+TGG | - | chr7_1:38187659-38187678 | Msa1018240:intron | 40.0% |
| !! | TCCATCCTTTGTTGTTGTCA+TGG | - | chr7_1:38187911-38187930 | Msa1018240:intron | 40.0% |
| !! | CCATCCTTTGTTGTTGTCAT+GGG | - | chr7_1:38187912-38187931 | Msa1018240:intron | 40.0% |
| ACATCAACACATACGATCGA+AGG | - | chr7_1:38188056-38188075 | Msa1018240:intron | 40.0% | |
| ACAAGGACATGTGTCTAACA+AGG | + | chr7_1:38188088-38188107 | None:intergenic | 40.0% | |
| !! | TACATAATGTGGCACTGACA+CGG | + | chr7_1:38188191-38188210 | None:intergenic | 40.0% |
| !! | TGACAATGGGCTACATAATG+TGG | + | chr7_1:38188202-38188221 | None:intergenic | 40.0% |
| CATTATGTAGCCCATTGTCA+CGG | - | chr7_1:38188202-38188221 | Msa1018240:intron | 40.0% | |
| GAGAGGAGATATTCAACTTC+AGG | - | chr7_1:38188482-38188501 | Msa1018240:intron | 40.0% | |
| !! | AGGTGTTGAATAGGAGAGTT+TGG | - | chr7_1:38188502-38188521 | Msa1018240:intron | 40.0% |
| CGCCTTGACACCTTAATATC+AGG | + | chr7_1:38185053-38185072 | None:intergenic | 45.0% | |
| AGTGGAAGCAACCAAAGCTT+TGG | - | chr7_1:38185089-38185108 | Msa1018240:CDS | 45.0% | |
| GAGGAAAGGCTAAGCGAAAA+AGG | + | chr7_1:38185163-38185182 | None:intergenic | 45.0% | |
| CGTGCAAGCAAAGACGTTAA+AGG | + | chr7_1:38185211-38185230 | None:intergenic | 45.0% | |
| CGGGTGATAAAGGTAAGGTA+AGG | + | chr7_1:38185260-38185279 | None:intergenic | 45.0% | |
| ! | CTGGTGGTCTTTTCTTCAAC+GGG | + | chr7_1:38185279-38185298 | None:intergenic | 45.0% |
| TAAGATTCGGATTCAGGCTG+GGG | + | chr7_1:38185478-38185497 | None:intergenic | 45.0% | |
| CTTAAGATTCGGATTCAGGC+TGG | + | chr7_1:38185480-38185499 | None:intergenic | 45.0% | |
| CAACACTAACTGAAAGCGAC+AGG | - | chr7_1:38185639-38185658 | Msa1018240:intron | 45.0% | |
| CCAGTGGCTTATGTAGTGTT+TGG | + | chr7_1:38185760-38185779 | None:intergenic | 45.0% | |
| CCAAACACTACATAAGCCAC+TGG | - | chr7_1:38185757-38185776 | Msa1018240:CDS | 45.0% | |
| AACACTACATAAGCCACTGG+TGG | - | chr7_1:38185760-38185779 | Msa1018240:CDS | 45.0% | |
| AAGCAAGCAGCACCTTGTAT+AGG | - | chr7_1:38185791-38185810 | Msa1018240:CDS | 45.0% | |
| AAGCAGCACCTTGTATAGGA+TGG | - | chr7_1:38185795-38185814 | Msa1018240:CDS | 45.0% | |
| AGCAGCACCTTGTATAGGAT+GGG | - | chr7_1:38185796-38185815 | Msa1018240:CDS | 45.0% | |
| ! | AAGCAGCGTTCCCTTCTTTT+CGG | - | chr7_1:38185826-38185845 | Msa1018240:CDS | 45.0% |
| CATGGCTAGTGAAATTGCTG+AGG | - | chr7_1:38186388-38186407 | Msa1018240:CDS | 45.0% | |
| AGGCCCCACAAATATCTCTA+AGG | - | chr7_1:38186796-38186815 | Msa1018240:intron | 45.0% | |
| GGGCCTTAGAGATATTTGTG+GGG | + | chr7_1:38186802-38186821 | None:intergenic | 45.0% | |
| GGGGCCTTAGAGATATTTGT+GGG | + | chr7_1:38186803-38186822 | None:intergenic | 45.0% | |
| ACAAACTCCCCTAGCCAAAT+GGG | + | chr7_1:38187000-38187019 | None:intergenic | 45.0% | |
| ! | TTTGCAGAGCATCACTCTCT+AGG | - | chr7_1:38187245-38187264 | Msa1018240:intron | 45.0% |
| CCCATGACAACAACAAAGGA+TGG | + | chr7_1:38187915-38187934 | None:intergenic | 45.0% | |
| TGCACCCATGACAACAACAA+AGG | + | chr7_1:38187919-38187938 | None:intergenic | 45.0% | |
| CGTTGAACACCACTTTCTTC+CGG | - | chr7_1:38187944-38187963 | Msa1018240:intron | 45.0% | |
| ATAGGAGAGTTTGGTCTGCT+AGG | - | chr7_1:38188511-38188530 | Msa1018240:intron | 45.0% | |
| TCTATCAGGATGTGCGCTAA+AGG | - | chr7_1:38188537-38188556 | Msa1018240:CDS | 45.0% | |
| TGAACTCACAAGTGGATGGA+AGG | - | chr7_1:38188569-38188588 | Msa1018240:CDS | 45.0% | |
| !! | TGGATGGAAGGCATTTGCAA+AGG | - | chr7_1:38188581-38188600 | Msa1018240:CDS | 45.0% |
| !! | ATAATTAATTGAAATATTAT+AGG | - | chr7_1:38188275-38188294 | Msa1018240:intron | 5.0% |
| GCTTTGGTTGCTTCCACTTG+TGG | + | chr7_1:38185087-38185106 | None:intergenic | 50.0% | |
| CACGACTTTCCACACAGCAT+TGG | - | chr7_1:38185227-38185246 | Msa1018240:CDS | 50.0% | |
| CAAATGTGGCAAGCTACTGG+TGG | + | chr7_1:38185295-38185314 | None:intergenic | 50.0% | |
| CAGCAAATGTGGCAAGCTAC+TGG | + | chr7_1:38185298-38185317 | None:intergenic | 50.0% | |
| TGCTCTAGTCCCGTACGATA+AGG | - | chr7_1:38185396-38185415 | Msa1018240:intron | 50.0% | |
| TCACTCTCTCCTCTCGTAGT+GGG | + | chr7_1:38185433-38185452 | None:intergenic | 50.0% | |
| ATCACTCTCTCCTCTCGTAG+TGG | + | chr7_1:38185434-38185453 | None:intergenic | 50.0% | |
| ! | TAGGAATGATTCGGGTGCTG+AGG | + | chr7_1:38185524-38185543 | None:intergenic | 50.0% |
| GTGATCTCGTCTTGCTTGCT+GGG | - | chr7_1:38185559-38185578 | Msa1018240:intron | 50.0% | |
| TTGAGTGATCGCTCGCAATC+TGG | + | chr7_1:38185615-38185634 | None:intergenic | 50.0% | |
| AAGGATGCCGCCGAAAAGAA+GGG | + | chr7_1:38185839-38185858 | None:intergenic | 50.0% | |
| GTCACCAGTGTTATGGGCTT+TGG | + | chr7_1:38185920-38185939 | None:intergenic | 50.0% | |
| GGAGACGTCACCAGTGTTAT+GGG | + | chr7_1:38185926-38185945 | None:intergenic | 50.0% | |
| ! | CATAACACTGGTGACGTCTC+CGG | - | chr7_1:38185925-38185944 | Msa1018240:CDS | 50.0% |
| ACGTCTCCGGCATAAATGCA+AGG | - | chr7_1:38185938-38185957 | Msa1018240:intron | 50.0% | |
| TCTCCGGCATAAATGCAAGG+AGG | - | chr7_1:38185941-38185960 | Msa1018240:intron | 50.0% | |
| GATCGAATCTCAAGGCTTCG+TGG | + | chr7_1:38186195-38186214 | None:intergenic | 50.0% | |
| !! | TTTTCGCCGGTTGGTTCACT+CGG | - | chr7_1:38186736-38186755 | Msa1018240:intron | 50.0% |
| ATAAGGCCGAGTGAACCAAC+CGG | + | chr7_1:38186745-38186764 | None:intergenic | 50.0% | |
| GGGGGCCTTAGAGATATTTG+TGG | + | chr7_1:38186804-38186823 | None:intergenic | 50.0% | |
| CACAAACTCCCCTAGCCAAA+TGG | + | chr7_1:38187001-38187020 | None:intergenic | 50.0% | |
| TTTGGCTAGGGGAGTTTGTG+TGG | - | chr7_1:38187001-38187020 | Msa1018240:intron | 50.0% | |
| GAGCATCACTCTCTAGGTCA+TGG | - | chr7_1:38187251-38187270 | Msa1018240:intron | 50.0% | |
| TGCAGCTTACCGGAAGAAAG+TGG | + | chr7_1:38187956-38187975 | None:intergenic | 50.0% | |
| GGTCTGCTAGGTACTCTATC+AGG | - | chr7_1:38188523-38188542 | Msa1018240:CDS | 50.0% | |
| TGCCAGCATGACAGCAAGCA+CGG | + | chr7_1:38185133-38185152 | None:intergenic | 55.0% | |
| GGGATGGAACCAATGCTGTG+TGG | + | chr7_1:38185239-38185258 | None:intergenic | 55.0% | |
| GAGAAAAGGCCCACTACGAG+AGG | - | chr7_1:38185421-38185440 | Msa1018240:intron | 55.0% | |
| !! | ATGATTCGGGTGCTGAGGAC+AGG | + | chr7_1:38185519-38185538 | None:intergenic | 55.0% |
| GGTGATCTCGTCTTGCTTGC+TGG | - | chr7_1:38185558-38185577 | Msa1018240:intron | 55.0% | |
| ATCTGGCTGGAAAGGTGGTC+TGG | + | chr7_1:38185598-38185617 | None:intergenic | 55.0% | |
| TCGCAATCTGGCTGGAAAGG+TGG | + | chr7_1:38185603-38185622 | None:intergenic | 55.0% | |
| TGCTTTCTCTCAGCCACCAG+TGG | + | chr7_1:38185776-38185795 | None:intergenic | 55.0% | |
| CGCTCTGCCCATCCTATACA+AGG | + | chr7_1:38185806-38185825 | None:intergenic | 55.0% | |
| ! | CAGCGTTCCCTTCTTTTCGG+CGG | - | chr7_1:38185829-38185848 | Msa1018240:CDS | 55.0% |
| GAAGGATGCCGCCGAAAAGA+AGG | + | chr7_1:38185840-38185859 | None:intergenic | 55.0% | |
| CGGAGACGTCACCAGTGTTA+TGG | + | chr7_1:38185927-38185946 | None:intergenic | 55.0% | |
| GGGCTTAGCCAAACCCAAAC+TGG | - | chr7_1:38186929-38186948 | Msa1018240:intron | 55.0% | |
| GGTGTCAAGGCGGTCGAAGA+AGG | - | chr7_1:38185061-38185080 | Msa1018240:CDS | 60.0% | |
| CGGTCGAAGAAGGCCACAAG+TGG | - | chr7_1:38185071-38185090 | Msa1018240:CDS | 60.0% | |
| !! | TGACAGCAAGCACGGACTGG+CGG | + | chr7_1:38185125-38185144 | None:intergenic | 60.0% |
| GCATGACAGCAAGCACGGAC+TGG | + | chr7_1:38185128-38185147 | None:intergenic | 60.0% | |
| !! | GTCCGTGCTTGCTGTCATGC+TGG | - | chr7_1:38185128-38185147 | Msa1018240:CDS | 60.0% |
| CGTACGGGACTAGAGCAAGC+TGG | + | chr7_1:38185393-38185412 | None:intergenic | 60.0% | |
| GATTCGGATTCAGGCTGGGG+AGG | + | chr7_1:38185475-38185494 | None:intergenic | 60.0% | |
| CGCTCGCAATCTGGCTGGAA+AGG | + | chr7_1:38185606-38185625 | None:intergenic | 60.0% | |
| GTGATCGCTCGCAATCTGGC+TGG | + | chr7_1:38185611-38185630 | None:intergenic | 60.0% | |
| ! | GGGGACAAAGAGGAGCACGT+AGG | - | chr7_1:38185730-38185749 | Msa1018240:intron | 60.0% |
| ! | CCACTTGCTGCCAATGCGGA+AGG | + | chr7_1:38185858-38185877 | None:intergenic | 60.0% |
| ! | CCTTCCGCATTGGCAGCAAG+TGG | - | chr7_1:38185855-38185874 | Msa1018240:CDS | 60.0% |
| ! | TCCGCATTGGCAGCAAGTGG+AGG | - | chr7_1:38185858-38185877 | Msa1018240:CDS | 60.0% |
| ! | CCCTCCACTTGCTGCCAATG+CGG | + | chr7_1:38185862-38185881 | None:intergenic | 60.0% |
| ! | CCGCATTGGCAGCAAGTGGA+GGG | - | chr7_1:38185859-38185878 | Msa1018240:CDS | 60.0% |
| TCGGCGGCATCCTTCCGCAT+TGG | - | chr7_1:38185845-38185864 | Msa1018240:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 38185029 | 38188692 | 38185029 | ID=Msa1018240;Name=Msa1018240 |
| chr7_1 | mRNA | 38185029 | 38188692 | 38185029 | ID=Msa1018240-mRNA-1;Parent=Msa1018240;Name=Msa1018240-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|0.8|0.75|0.6|5|0|405 |
| chr7_1 | exon | 38188518 | 38188692 | 38188518 | ID=Msa1018240-mRNA-1:exon:7358;Parent=Msa1018240-mRNA-1 |
| chr7_1 | exon | 38187252 | 38187340 | 38187252 | ID=Msa1018240-mRNA-1:exon:7357;Parent=Msa1018240-mRNA-1 |
| chr7_1 | exon | 38186118 | 38186617 | 38186118 | ID=Msa1018240-mRNA-1:exon:7356;Parent=Msa1018240-mRNA-1 |
| chr7_1 | exon | 38185756 | 38185951 | 38185756 | ID=Msa1018240-mRNA-1:exon:7355;Parent=Msa1018240-mRNA-1 |
| chr7_1 | exon | 38185029 | 38185286 | 38185029 | ID=Msa1018240-mRNA-1:exon:7354;Parent=Msa1018240-mRNA-1 |
| chr7_1 | CDS | 38188518 | 38188692 | 38188518 | ID=Msa1018240-mRNA-1:cds;Parent=Msa1018240-mRNA-1 |
| chr7_1 | CDS | 38187252 | 38187340 | 38187252 | ID=Msa1018240-mRNA-1:cds;Parent=Msa1018240-mRNA-1 |
| chr7_1 | CDS | 38186118 | 38186617 | 38186118 | ID=Msa1018240-mRNA-1:cds;Parent=Msa1018240-mRNA-1 |
| chr7_1 | CDS | 38185756 | 38185951 | 38185756 | ID=Msa1018240-mRNA-1:cds;Parent=Msa1018240-mRNA-1 |
| chr7_1 | CDS | 38185029 | 38185286 | 38185029 | ID=Msa1018240-mRNA-1:cds;Parent=Msa1018240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
