Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018300 | XP_003622663.1 | 91.746 | 315 | 26 | 0 | 1 | 315 | 1 | 315 | 0.0 | 601 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018300 | sp|Q9ZSH7|Y4158_ARATH | 40.385 | 104 | 62 | 0 | 13 | 116 | 30 | 133 | 3.07e-21 | 92.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018300 | G7KVV4 | 91.746 | 315 | 26 | 0 | 1 | 315 | 1 | 315 | 0.0 | 601 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1018300 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018300 | MtrunA17_Chr7g0233521 | 91.304 | 276 | 24 | 0 | 28 | 303 | 1 | 276 | 0.0 | 530 |
| Msa1018300 | MtrunA17_Chr7g0233541 | 75.768 | 293 | 54 | 4 | 28 | 303 | 1 | 293 | 7.01e-160 | 447 |
| Msa1018300 | MtrunA17_Chr7g0233561 | 65.732 | 321 | 91 | 5 | 1 | 303 | 6 | 325 | 4.32e-145 | 411 |
| Msa1018300 | MtrunA17_Chr3g0131891 | 65.204 | 319 | 86 | 6 | 1 | 303 | 7 | 316 | 3.14e-142 | 404 |
| Msa1018300 | MtrunA17_Chr7g0233531 | 64.605 | 291 | 73 | 5 | 28 | 303 | 1 | 276 | 2.51e-127 | 364 |
| Msa1018300 | MtrunA17_Chr7g0233571 | 63.256 | 215 | 62 | 1 | 5 | 202 | 2 | 216 | 1.48e-94 | 279 |
| Msa1018300 | MtrunA17_Chr8g0390841 | 35.738 | 305 | 161 | 6 | 11 | 290 | 37 | 331 | 3.78e-51 | 176 |
| Msa1018300 | MtrunA17_Chr1g0208771 | 33.219 | 292 | 151 | 7 | 29 | 290 | 13 | 290 | 3.94e-46 | 162 |
| Msa1018300 | MtrunA17_Chr1g0163071 | 34.564 | 298 | 149 | 9 | 28 | 290 | 1 | 287 | 4.28e-46 | 158 |
| Msa1018300 | MtrunA17_Chr3g0103181 | 33.553 | 304 | 159 | 11 | 3 | 289 | 2 | 279 | 3.92e-41 | 144 |
| Msa1018300 | MtrunA17_Chr1g0163181 | 31.338 | 284 | 172 | 7 | 22 | 288 | 14 | 291 | 1.43e-32 | 125 |
| Msa1018300 | MtrunA17_Chr1g0163231 | 29.966 | 297 | 165 | 9 | 10 | 288 | 6 | 277 | 1.72e-32 | 122 |
| Msa1018300 | MtrunA17_Chr1g0163251 | 32.993 | 294 | 171 | 11 | 13 | 296 | 9 | 286 | 3.23e-32 | 123 |
| Msa1018300 | MtrunA17_Chr1g0171611 | 30.662 | 287 | 164 | 7 | 10 | 288 | 6 | 265 | 1.31e-31 | 119 |
| Msa1018300 | MtrunA17_Chr1g0163221 | 30.795 | 302 | 178 | 9 | 5 | 289 | 3 | 290 | 2.36e-31 | 120 |
| Msa1018300 | MtrunA17_Chr1g0163261 | 31.210 | 314 | 161 | 10 | 10 | 297 | 6 | 290 | 3.43e-31 | 119 |
| Msa1018300 | MtrunA17_Chr3g0103191 | 32.870 | 216 | 106 | 6 | 6 | 201 | 5 | 201 | 1.08e-29 | 113 |
| Msa1018300 | MtrunA17_Chr3g0103171 | 28.309 | 272 | 172 | 7 | 29 | 289 | 6 | 265 | 1.20e-29 | 114 |
| Msa1018300 | MtrunA17_Chr3g0103151 | 50.000 | 102 | 49 | 1 | 10 | 111 | 9 | 108 | 2.19e-29 | 110 |
| Msa1018300 | MtrunA17_Chr4g0067431 | 29.739 | 306 | 181 | 8 | 11 | 289 | 13 | 311 | 3.19e-29 | 114 |
| Msa1018300 | MtrunA17_Chr5g0419201 | 46.465 | 99 | 53 | 0 | 13 | 111 | 16 | 114 | 1.19e-27 | 106 |
| Msa1018300 | MtrunA17_Chr1g0163201 | 31.183 | 279 | 163 | 9 | 29 | 290 | 19 | 285 | 3.22e-26 | 107 |
| Msa1018300 | MtrunA17_Chr5g0429931 | 27.106 | 273 | 153 | 7 | 29 | 293 | 11 | 245 | 3.65e-25 | 101 |
| Msa1018300 | MtrunA17_Chr3g0077411 | 26.460 | 291 | 176 | 7 | 11 | 293 | 260 | 520 | 5.52e-24 | 102 |
| Msa1018300 | MtrunA17_Chr3g0077411 | 23.723 | 274 | 156 | 7 | 12 | 285 | 24 | 244 | 2.41e-19 | 88.2 |
| Msa1018300 | MtrunA17_Chr3g0077451 | 26.449 | 276 | 146 | 7 | 27 | 293 | 10 | 237 | 8.03e-24 | 97.4 |
| Msa1018300 | MtrunA17_Chr1g0154131 | 28.671 | 286 | 185 | 9 | 11 | 282 | 182 | 462 | 1.37e-23 | 100 |
| Msa1018300 | MtrunA17_Chr6g0467351 | 40.769 | 130 | 68 | 2 | 11 | 131 | 13 | 142 | 1.50e-23 | 96.7 |
| Msa1018300 | MtrunA17_Chr1g0154161 | 25.256 | 293 | 211 | 5 | 11 | 298 | 28 | 317 | 2.15e-21 | 92.8 |
| Msa1018300 | MtrunA17_Chr1g0163131 | 28.981 | 314 | 169 | 10 | 6 | 286 | 11 | 303 | 2.71e-21 | 92.0 |
| Msa1018300 | MtrunA17_Chr3g0103201 | 30.603 | 232 | 139 | 7 | 68 | 289 | 1 | 220 | 2.89e-21 | 90.1 |
| Msa1018300 | MtrunA17_Chr1g0163101 | 38.298 | 141 | 75 | 3 | 9 | 149 | 13 | 141 | 4.27e-21 | 88.6 |
| Msa1018300 | MtrunA17_Chr1g0154171 | 25.301 | 332 | 195 | 9 | 6 | 289 | 16 | 342 | 1.29e-20 | 90.9 |
| Msa1018300 | MtrunA17_Chr1g0154041 | 24.931 | 361 | 191 | 11 | 6 | 299 | 10 | 357 | 2.59e-20 | 91.3 |
| Msa1018300 | MtrunA17_Chr1g0154071 | 24.561 | 342 | 189 | 10 | 14 | 295 | 157 | 489 | 4.46e-20 | 90.5 |
| Msa1018300 | MtrunA17_Chr4g0033961 | 40.000 | 105 | 61 | 1 | 13 | 115 | 6 | 110 | 5.97e-20 | 89.7 |
| Msa1018300 | MtrunA17_Chr4g0033961 | 33.835 | 133 | 80 | 4 | 165 | 295 | 267 | 393 | 4.72e-14 | 72.4 |
| Msa1018300 | MtrunA17_Chr1g0154191 | 25.788 | 349 | 182 | 9 | 6 | 288 | 15 | 352 | 1.43e-19 | 88.2 |
| Msa1018300 | MtrunA17_Chr1g0163191 | 45.556 | 90 | 47 | 1 | 22 | 111 | 14 | 101 | 2.30e-19 | 83.6 |
| Msa1018300 | MtrunA17_Chr1g0162441 | 38.384 | 99 | 61 | 0 | 13 | 111 | 7 | 105 | 2.48e-19 | 87.8 |
| Msa1018300 | MtrunA17_Chr1g0162441 | 30.000 | 150 | 94 | 4 | 165 | 309 | 272 | 415 | 1.33e-13 | 70.9 |
| Msa1018300 | MtrunA17_Chr1g0163241 | 46.988 | 83 | 42 | 1 | 29 | 111 | 23 | 103 | 2.06e-18 | 80.9 |
| Msa1018300 | MtrunA17_Chr3g0077461 | 27.574 | 272 | 147 | 6 | 12 | 281 | 236 | 459 | 2.08e-18 | 85.5 |
| Msa1018300 | MtrunA17_Chr3g0077461 | 33.721 | 86 | 57 | 0 | 29 | 114 | 23 | 108 | 3.49e-15 | 75.9 |
| Msa1018300 | MtrunA17_Chr1g0163061 | 43.810 | 105 | 58 | 1 | 11 | 114 | 13 | 117 | 2.12e-18 | 83.6 |
| Msa1018300 | MtrunA17_Chr1g0163121 | 39.024 | 123 | 62 | 3 | 27 | 149 | 9 | 118 | 1.27e-17 | 78.2 |
| Msa1018300 | MtrunA17_Chr3g0077421 | 27.236 | 246 | 123 | 8 | 57 | 293 | 1 | 199 | 8.03e-17 | 77.4 |
| Msa1018300 | MtrunA17_Chr3g0077441 | 27.236 | 246 | 123 | 8 | 57 | 293 | 1 | 199 | 8.03e-17 | 77.4 |
| Msa1018300 | MtrunA17_Chr3g0077431 | 26.423 | 246 | 124 | 7 | 57 | 293 | 1 | 198 | 1.11e-15 | 74.3 |
| Msa1018300 | MtrunA17_Chr3g0077381 | 29.661 | 118 | 78 | 1 | 27 | 139 | 34 | 151 | 3.61e-15 | 75.9 |
| Msa1018300 | MtrunA17_Chr3g0077381 | 30.702 | 114 | 79 | 0 | 12 | 125 | 246 | 359 | 6.82e-14 | 72.0 |
| Msa1018300 | MtrunA17_Chr4g0009491 | 31.579 | 114 | 78 | 0 | 12 | 125 | 224 | 337 | 3.87e-15 | 75.5 |
| Msa1018300 | MtrunA17_Chr4g0009491 | 29.730 | 111 | 73 | 1 | 27 | 132 | 11 | 121 | 3.41e-14 | 72.8 |
| Msa1018300 | MtrunA17_Chr1g0163141 | 34.646 | 127 | 78 | 3 | 27 | 153 | 9 | 130 | 7.43e-15 | 71.6 |
| Msa1018300 | MtrunA17_Chr1g0162411 | 36.364 | 99 | 61 | 1 | 13 | 111 | 7 | 103 | 8.72e-15 | 74.7 |
| Msa1018300 | MtrunA17_Chr1g0162161 | 34.426 | 122 | 67 | 3 | 28 | 149 | 3 | 111 | 6.31e-14 | 68.6 |
| Msa1018300 | MtrunA17_Chr6g0476181 | 45.238 | 84 | 43 | 2 | 28 | 111 | 1 | 81 | 1.32e-13 | 67.8 |
| Msa1018300 | MtrunA17_Chr3g0077361 | 23.221 | 267 | 152 | 6 | 12 | 277 | 39 | 253 | 1.50e-13 | 70.9 |
| Msa1018300 | MtrunA17_Chr1g0163081 | 36.154 | 130 | 68 | 5 | 28 | 157 | 5 | 119 | 1.70e-13 | 67.0 |
| Msa1018300 | MtrunA17_Chr1g0154101 | 31.333 | 150 | 92 | 3 | 11 | 154 | 23 | 167 | 1.94e-13 | 70.9 |
| Msa1018300 | MtrunA17_Chr1g0154101 | 26.289 | 194 | 120 | 4 | 11 | 183 | 182 | 373 | 2.40e-13 | 70.9 |
| Msa1018300 | MtrunA17_Chr1g0154101 | 33.333 | 135 | 81 | 4 | 154 | 282 | 463 | 594 | 9.50e-12 | 65.9 |
| Msa1018300 | MtrunA17_Chr1g0154211 | 33.673 | 98 | 64 | 1 | 6 | 103 | 16 | 112 | 4.04e-12 | 66.2 |
| Msa1018300 | MtrunA17_Chr1g0154251 | 33.333 | 93 | 61 | 1 | 11 | 103 | 25 | 116 | 5.50e-12 | 66.2 |
| Msa1018300 | MtrunA17_Chr1g0154151 | 30.178 | 169 | 86 | 3 | 16 | 184 | 14 | 150 | 1.23e-11 | 64.7 |
| Msa1018300 | MtrunA17_Chr1g0154241 | 28.947 | 152 | 103 | 3 | 11 | 158 | 20 | 170 | 2.15e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018300 | AT4G01580.1 | 40.385 | 104 | 62 | 0 | 13 | 116 | 30 | 133 | 3.12e-22 | 92.4 |
| Msa1018300 | AT1G49475.1 | 44.118 | 102 | 56 | 1 | 13 | 114 | 34 | 134 | 7.96e-22 | 91.3 |
| Msa1018300 | AT3G18990.1 | 43.434 | 99 | 56 | 0 | 13 | 111 | 6 | 104 | 8.02e-22 | 94.4 |
| Msa1018300 | AT3G18990.1 | 29.221 | 154 | 101 | 3 | 137 | 290 | 191 | 336 | 3.20e-13 | 69.7 |
| Msa1018300 | AT3G18990.2 | 43.434 | 99 | 56 | 0 | 13 | 111 | 6 | 104 | 1.22e-21 | 94.4 |
| Msa1018300 | AT3G18990.2 | 29.299 | 157 | 103 | 3 | 137 | 293 | 191 | 339 | 1.58e-13 | 70.9 |
| Msa1018300 | AT3G18960.2 | 39.423 | 104 | 63 | 0 | 13 | 116 | 30 | 133 | 5.65e-21 | 89.0 |
| Msa1018300 | AT3G18960.1 | 39.423 | 104 | 63 | 0 | 13 | 116 | 30 | 133 | 5.90e-21 | 89.4 |
| Msa1018300 | AT3G18960.3 | 42.045 | 88 | 51 | 0 | 29 | 116 | 9 | 96 | 1.90e-17 | 79.0 |
| Msa1018300 | AT1G49480.3 | 31.746 | 126 | 80 | 2 | 165 | 290 | 102 | 221 | 9.90e-14 | 69.7 |
| Msa1018300 | AT1G49480.1 | 31.746 | 126 | 80 | 2 | 165 | 290 | 102 | 221 | 9.90e-14 | 69.7 |
| Msa1018300 | AT1G49480.2 | 31.746 | 126 | 80 | 2 | 165 | 290 | 102 | 221 | 9.90e-14 | 69.7 |
Find 45 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGTTAAATGAAGGAATT+TGG | 0.170862 | 7_1:-38305596 | Msa1018300:CDS |
| TGCAAAATGGAAATTAAATT+TGG | 0.194062 | 7_1:-38306605 | Msa1018300:CDS |
| TATTTCTCCACAAACTTTCT+TGG | 0.217927 | 7_1:+38306673 | None:intergenic |
| AGAAAGTTTGTGGAGAAATA+TGG | 0.293086 | 7_1:-38306670 | Msa1018300:CDS |
| CGTGGAACACCGATTTCTTA+TGG | 0.302917 | 7_1:-38306096 | Msa1018300:intron |
| GAATGGATAATTTATCTCTA+AGG | 0.305393 | 7_1:+38306444 | None:intergenic |
| CCAAAGAGTTGCAGCTAAAA+AGG | 0.311285 | 7_1:-38306422 | Msa1018300:CDS |
| TTCCATCAACCACGTGAAAT+AGG | 0.327923 | 7_1:-38306358 | Msa1018300:CDS |
| CTAATCAGGATGACCCTAAA+AGG | 0.334409 | 7_1:-38305561 | Msa1018300:CDS |
| AGACTCCAAATGGTGCAAAA+TGG | 0.337543 | 7_1:-38306618 | Msa1018300:CDS |
| ATCCTGATTAGGTACTTTGC+AGG | 0.384916 | 7_1:+38305573 | None:intergenic |
| TGGTAATAGACACTTTGATT+TGG | 0.391800 | 7_1:-38305643 | Msa1018300:CDS |
| GGCAAGGTATGGTTTGAAAA+AGG | 0.397029 | 7_1:-38306571 | Msa1018300:CDS |
| TGATGCAAAGTTGCTACCTT+TGG | 0.408525 | 7_1:+38306304 | None:intergenic |
| TTCCTATTTCACGTGGTTGA+TGG | 0.411563 | 7_1:+38306356 | None:intergenic |
| CAGAATATACCACGTATGTT+TGG | 0.412403 | 7_1:-38305663 | Msa1018300:CDS |
| GTTTATTTGTTGTTAAATGA+AGG | 0.421453 | 7_1:-38305603 | Msa1018300:CDS |
| GGCCTGCAAAGTACCTAATC+AGG | 0.423211 | 7_1:-38305575 | Msa1018300:CDS |
| GATGATGCCAAGAAAGTTTG+TGG | 0.440968 | 7_1:-38306680 | Msa1018300:CDS |
| GATATTTGAACAGCAGAAGA+TGG | 0.468399 | 7_1:+38306509 | None:intergenic |
| AGCAACTTACCATAAGAAAT+CGG | 0.473971 | 7_1:+38306087 | None:intergenic |
| GAGAAGCTTCTTCTTTCACT+TGG | 0.486869 | 7_1:+38305281 | None:intergenic |
| TTTGTGGAGAAATATGGAAA+AGG | 0.487637 | 7_1:-38306664 | Msa1018300:CDS |
| ATATATCTAAAGACTCCAAA+TGG | 0.494837 | 7_1:-38306628 | Msa1018300:CDS |
| AAGGACAATAACTTGAAAGT+TGG | 0.499244 | 7_1:-38305498 | Msa1018300:CDS |
| TTAGCTGCAACTCTTTGGAA+TGG | 0.508092 | 7_1:+38306427 | None:intergenic |
| TCTAAAGATATGAACAATGA+AGG | 0.545794 | 7_1:+38305434 | None:intergenic |
| CGCATGACAACAACAAAGGA+TGG | 0.548509 | 7_1:+38306128 | None:intergenic |
| TGATCTCACAACTGGATGGA+AGG | 0.549699 | 7_1:-38305529 | Msa1018300:CDS |
| AGAAGCTTCTTCTTTCACTT+GGG | 0.559960 | 7_1:+38305282 | None:intergenic |
| CTTGCTCAAAATCTTCATGA+AGG | 0.562390 | 7_1:-38307547 | Msa1018300:CDS |
| TTTGATTTGGATAAGAAGAG+AGG | 0.576081 | 7_1:-38305630 | Msa1018300:CDS |
| CCACGTGAAATAGGAAGCAA+TGG | 0.577300 | 7_1:-38306349 | Msa1018300:CDS |
| GATCATCACTCTCTAGCTGA+TGG | 0.591483 | 7_1:-38306532 | Msa1018300:CDS |
| GTAGCAACTTTGCATCATGC+TGG | 0.604292 | 7_1:-38306298 | Msa1018300:CDS |
| CCATTGCTTCCTATTTCACG+TGG | 0.606111 | 7_1:+38306349 | None:intergenic |
| GTGAAAGAAGAAGCTTCTCA+AGG | 0.611713 | 7_1:-38305277 | Msa1018300:CDS |
| TGGTTGATGGAATTCAAAAG+AGG | 0.624709 | 7_1:+38306369 | None:intergenic |
| TGAAGTTGAGAAATTGCCAA+AGG | 0.638693 | 7_1:-38306320 | Msa1018300:CDS |
| TGGATGGAAGGCATTTGCAA+AGG | 0.644602 | 7_1:-38305517 | Msa1018300:CDS |
| TGTCATGCGTGCATCATACG+TGG | 0.677837 | 7_1:-38306114 | Msa1018300:CDS |
| TGCACGCATGACAACAACAA+AGG | 0.693553 | 7_1:+38306124 | None:intergenic |
| CCAGTTGTGAGATCAAAATG+TGG | 0.701103 | 7_1:+38305537 | None:intergenic |
| CATGCTGGCAGAGAGTCCAA+AGG | 0.714363 | 7_1:-38306283 | Msa1018300:intron |
| TGTCTATTACCAAACATACG+TGG | 0.737084 | 7_1:+38305654 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GGTTTTAAAATAAAAAATTA+AGG | + | chr7_1:38305732-38305751 | None:intergenic | 10.0% |
| !!! | GGTTTTAAAATAAAAAATTA+AGG | + | chr7_1:38305732-38305751 | None:intergenic | 10.0% |
| !! | ATTATCACATAAATGTTTAT+TGG | - | chr7_1:38307000-38307019 | Msa1018300:intron | 15.0% |
| !! | ATTATCACATAAATGTTTAT+TGG | - | chr7_1:38307000-38307019 | Msa1018300:intron | 15.0% |
| !! | TAAGGAAAAAAAGTTCAAAT+TGG | + | chr7_1:38305714-38305733 | None:intergenic | 20.0% |
| !! | ATAATTAAGAAAAATGCACA+TGG | - | chr7_1:38305868-38305887 | Msa1018300:intron | 20.0% |
| !!! | ACAAATTTTTTTCCTCAAAA+GGG | - | chr7_1:38305919-38305938 | Msa1018300:intron | 20.0% |
| !! | TGCAAAATGGAAATTAAATT+TGG | - | chr7_1:38306266-38306285 | Msa1018300:intron | 20.0% |
| !! | TTAAATTTGGTAAAAAGTGA+TGG | - | chr7_1:38306279-38306298 | Msa1018300:intron | 20.0% |
| !! | TATCTGATTGAATAATTGTT+AGG | + | chr7_1:38306981-38307000 | None:intergenic | 20.0% |
| !! | AAAAATTAGAAAGTTCTTGT+TGG | + | chr7_1:38307156-38307175 | None:intergenic | 20.0% |
| !!! | CATTTATCTTTTCTTTTGAT+TGG | - | chr7_1:38307185-38307204 | Msa1018300:intron | 20.0% |
| !!! | GTTTATTTGTTGTTAAATGA+AGG | - | chr7_1:38307268-38307287 | Msa1018300:intron | 20.0% |
| !! | TAAGGAAAAAAAGTTCAAAT+TGG | + | chr7_1:38305714-38305733 | None:intergenic | 20.0% |
| !! | ATAATTAAGAAAAATGCACA+TGG | - | chr7_1:38305868-38305887 | Msa1018300:intron | 20.0% |
| !!! | ACAAATTTTTTTCCTCAAAA+GGG | - | chr7_1:38305919-38305938 | Msa1018300:intron | 20.0% |
| !! | TGCAAAATGGAAATTAAATT+TGG | - | chr7_1:38306266-38306285 | Msa1018300:intron | 20.0% |
| !! | TTAAATTTGGTAAAAAGTGA+TGG | - | chr7_1:38306279-38306298 | Msa1018300:intron | 20.0% |
| !! | TATCTGATTGAATAATTGTT+AGG | + | chr7_1:38306981-38307000 | None:intergenic | 20.0% |
| !! | AAAAATTAGAAAGTTCTTGT+TGG | + | chr7_1:38307156-38307175 | None:intergenic | 20.0% |
| !!! | CATTTATCTTTTCTTTTGAT+TGG | - | chr7_1:38307185-38307204 | Msa1018300:intron | 20.0% |
| !!! | GTTTATTTGTTGTTAAATGA+AGG | - | chr7_1:38307268-38307287 | Msa1018300:intron | 20.0% |
| ! | ATTATCTTGAAAAAGTGGAT+TGG | + | chr7_1:38305303-38305322 | None:intergenic | 25.0% |
| ! | CAAGTATTATCTTGAAAAAG+TGG | + | chr7_1:38305308-38305327 | None:intergenic | 25.0% |
| ! | AATAAGAGAATCTAAGTCAA+AGG | + | chr7_1:38305362-38305381 | None:intergenic | 25.0% |
| ! | TAATCTTGAGTTAGATTCTT+TGG | - | chr7_1:38305390-38305409 | Msa1018300:intron | 25.0% |
| ! | TTATTATGACACAAGTTTGT+TGG | - | chr7_1:38305477-38305496 | Msa1018300:CDS | 25.0% |
| ! | TTAGTTGAGATAAGATCTAT+GGG | + | chr7_1:38305559-38305578 | None:intergenic | 25.0% |
| ! | AAAAAAAATATGTCGCTACA+TGG | - | chr7_1:38305680-38305699 | Msa1018300:intron | 25.0% |
| ! | TGCATATGAGCTTATATTTA+GGG | - | chr7_1:38305896-38305915 | Msa1018300:intron | 25.0% |
| !!! | GACAAATTTTTTTCCTCAAA+AGG | - | chr7_1:38305918-38305937 | Msa1018300:intron | 25.0% |
| !!! | CAAATTTTTTTCCTCAAAAG+GGG | - | chr7_1:38305920-38305939 | Msa1018300:intron | 25.0% |
| !! | TGTAAATAACAATTCGAGTT+TGG | - | chr7_1:38305946-38305965 | Msa1018300:intron | 25.0% |
| !! | AATTACTTAGTCTTCTAATC+TGG | + | chr7_1:38306088-38306107 | None:intergenic | 25.0% |
| ! | ATATATCTAAAGACTCCAAA+TGG | - | chr7_1:38306243-38306262 | Msa1018300:intron | 25.0% |
| ! | GAATGGATAATTTATCTCTA+AGG | + | chr7_1:38306430-38306449 | None:intergenic | 25.0% |
| ! | TGCAAAATTTGAACACAATA+AGG | + | chr7_1:38306654-38306673 | None:intergenic | 25.0% |
| !! | TTATTGTGTTCAAATTTTGC+AGG | - | chr7_1:38306653-38306672 | Msa1018300:CDS | 25.0% |
| !! | TATTGTGTTCAAATTTTGCA+GGG | - | chr7_1:38306654-38306673 | Msa1018300:CDS | 25.0% |
| ! | TGTTGTTAAATGAAGGAATT+TGG | - | chr7_1:38307275-38307294 | Msa1018300:intron | 25.0% |
| ! | TCTAAAGATATGAACAATGA+AGG | + | chr7_1:38307440-38307459 | None:intergenic | 25.0% |
| ! | ATTATCTTGAAAAAGTGGAT+TGG | + | chr7_1:38305303-38305322 | None:intergenic | 25.0% |
| ! | CAAGTATTATCTTGAAAAAG+TGG | + | chr7_1:38305308-38305327 | None:intergenic | 25.0% |
| ! | AATAAGAGAATCTAAGTCAA+AGG | + | chr7_1:38305362-38305381 | None:intergenic | 25.0% |
| ! | TAATCTTGAGTTAGATTCTT+TGG | - | chr7_1:38305390-38305409 | Msa1018300:intron | 25.0% |
| ! | TTATTATGACACAAGTTTGT+TGG | - | chr7_1:38305477-38305496 | Msa1018300:CDS | 25.0% |
| ! | TTAGTTGAGATAAGATCTAT+GGG | + | chr7_1:38305559-38305578 | None:intergenic | 25.0% |
| ! | AAAAAAAATATGTCGCTACA+TGG | - | chr7_1:38305680-38305699 | Msa1018300:intron | 25.0% |
| ! | TGCATATGAGCTTATATTTA+GGG | - | chr7_1:38305896-38305915 | Msa1018300:intron | 25.0% |
| !!! | GACAAATTTTTTTCCTCAAA+AGG | - | chr7_1:38305918-38305937 | Msa1018300:intron | 25.0% |
| !!! | CAAATTTTTTTCCTCAAAAG+GGG | - | chr7_1:38305920-38305939 | Msa1018300:intron | 25.0% |
| !! | TGTAAATAACAATTCGAGTT+TGG | - | chr7_1:38305946-38305965 | Msa1018300:intron | 25.0% |
| !! | AATTACTTAGTCTTCTAATC+TGG | + | chr7_1:38306088-38306107 | None:intergenic | 25.0% |
| ! | ATATATCTAAAGACTCCAAA+TGG | - | chr7_1:38306243-38306262 | Msa1018300:intron | 25.0% |
| ! | GAATGGATAATTTATCTCTA+AGG | + | chr7_1:38306430-38306449 | None:intergenic | 25.0% |
| ! | TGCAAAATTTGAACACAATA+AGG | + | chr7_1:38306654-38306673 | None:intergenic | 25.0% |
| !! | TTATTGTGTTCAAATTTTGC+AGG | - | chr7_1:38306653-38306672 | Msa1018300:CDS | 25.0% |
| !! | TATTGTGTTCAAATTTTGCA+GGG | - | chr7_1:38306654-38306673 | Msa1018300:CDS | 25.0% |
| ! | TGTTGTTAAATGAAGGAATT+TGG | - | chr7_1:38307275-38307294 | Msa1018300:intron | 25.0% |
| ! | TCTAAAGATATGAACAATGA+AGG | + | chr7_1:38307440-38307459 | None:intergenic | 25.0% |
| GTTAGTTGAGATAAGATCTA+TGG | + | chr7_1:38305560-38305579 | None:intergenic | 30.0% | |
| ACAAATTTGCCGAAATTGTT+AGG | - | chr7_1:38305578-38305597 | Msa1018300:CDS | 30.0% | |
| AACTCACACACATAATTAAG+TGG | + | chr7_1:38305627-38305646 | None:intergenic | 30.0% | |
| AAGTTAATTACTTGCAGGTT+TGG | + | chr7_1:38305753-38305772 | None:intergenic | 30.0% | |
| AAACCTGCAAGTAATTAACT+TGG | - | chr7_1:38305752-38305771 | Msa1018300:intron | 30.0% | |
| AACCTGCAAGTAATTAACTT+GGG | - | chr7_1:38305753-38305772 | Msa1018300:intron | 30.0% | |
| TAGCATGTATCATGACATAT+TGG | - | chr7_1:38305781-38305800 | Msa1018300:intron | 30.0% | |
| TGTTAGATAGCATTGTTAGA+TGG | + | chr7_1:38305840-38305859 | None:intergenic | 30.0% | |
| TCTAACAATGCTATCTAACA+AGG | - | chr7_1:38305840-38305859 | Msa1018300:intron | 30.0% | |
| CTAACAATGCTATCTAACAA+GGG | - | chr7_1:38305841-38305860 | Msa1018300:intron | 30.0% | |
| CTGCATATGAGCTTATATTT+AGG | - | chr7_1:38305895-38305914 | Msa1018300:intron | 30.0% | |
| ! | TTGGTCCACTAATTTTATGA+TGG | - | chr7_1:38305965-38305984 | Msa1018300:intron | 30.0% |
| CAAGTCCATCATAAAATTAG+TGG | + | chr7_1:38305973-38305992 | None:intergenic | 30.0% | |
| GTTTCATTAGGCTACAAATT+TGG | + | chr7_1:38306000-38306019 | None:intergenic | 30.0% | |
| TTTGTAGCCTAATGAAACTA+TGG | - | chr7_1:38306002-38306021 | Msa1018300:intron | 30.0% | |
| TTGTAGCCTAATGAAACTAT+GGG | - | chr7_1:38306003-38306022 | Msa1018300:intron | 30.0% | |
| TATTTCTCCACAAACTTTCT+TGG | + | chr7_1:38306201-38306220 | None:intergenic | 30.0% | |
| AGAAAGTTTGTGGAGAAATA+TGG | - | chr7_1:38306201-38306220 | Msa1018300:intron | 30.0% | |
| TTTGTGGAGAAATATGGAAA+AGG | - | chr7_1:38306207-38306226 | Msa1018300:intron | 30.0% | |
| ! | AATTTCCATTTTGCACCATT+TGG | + | chr7_1:38306261-38306280 | None:intergenic | 30.0% |
| GACTCAATCTTATATACCTT+TGG | + | chr7_1:38306607-38306626 | None:intergenic | 30.0% | |
| AGCAACTTACCATAAGAAAT+CGG | + | chr7_1:38306787-38306806 | None:intergenic | 30.0% | |
| TGGTAATAGACACTTTGATT+TGG | - | chr7_1:38307228-38307247 | Msa1018300:intron | 30.0% | |
| !! | TTTGATTTGGATAAGAAGAG+AGG | - | chr7_1:38307241-38307260 | Msa1018300:intron | 30.0% |
| ! | ATCAAAATGTGGTCCTTTTA+GGG | + | chr7_1:38307326-38307345 | None:intergenic | 30.0% |
| AAGGACAATAACTTGAAAGT+TGG | - | chr7_1:38307373-38307392 | Msa1018300:intron | 30.0% | |
| ATTGTTCTACATCTCAAAGT+AGG | - | chr7_1:38307482-38307501 | Msa1018300:intron | 30.0% | |
| GTTAGTTGAGATAAGATCTA+TGG | + | chr7_1:38305560-38305579 | None:intergenic | 30.0% | |
| ACAAATTTGCCGAAATTGTT+AGG | - | chr7_1:38305578-38305597 | Msa1018300:CDS | 30.0% | |
| AACTCACACACATAATTAAG+TGG | + | chr7_1:38305627-38305646 | None:intergenic | 30.0% | |
| AAGTTAATTACTTGCAGGTT+TGG | + | chr7_1:38305753-38305772 | None:intergenic | 30.0% | |
| AAACCTGCAAGTAATTAACT+TGG | - | chr7_1:38305752-38305771 | Msa1018300:intron | 30.0% | |
| AACCTGCAAGTAATTAACTT+GGG | - | chr7_1:38305753-38305772 | Msa1018300:intron | 30.0% | |
| TAGCATGTATCATGACATAT+TGG | - | chr7_1:38305781-38305800 | Msa1018300:intron | 30.0% | |
| TGTTAGATAGCATTGTTAGA+TGG | + | chr7_1:38305840-38305859 | None:intergenic | 30.0% | |
| TCTAACAATGCTATCTAACA+AGG | - | chr7_1:38305840-38305859 | Msa1018300:intron | 30.0% | |
| CTAACAATGCTATCTAACAA+GGG | - | chr7_1:38305841-38305860 | Msa1018300:intron | 30.0% | |
| CTGCATATGAGCTTATATTT+AGG | - | chr7_1:38305895-38305914 | Msa1018300:intron | 30.0% | |
| ! | TTGGTCCACTAATTTTATGA+TGG | - | chr7_1:38305965-38305984 | Msa1018300:intron | 30.0% |
| CAAGTCCATCATAAAATTAG+TGG | + | chr7_1:38305973-38305992 | None:intergenic | 30.0% | |
| GTTTCATTAGGCTACAAATT+TGG | + | chr7_1:38306000-38306019 | None:intergenic | 30.0% | |
| TTTGTAGCCTAATGAAACTA+TGG | - | chr7_1:38306002-38306021 | Msa1018300:intron | 30.0% | |
| TTGTAGCCTAATGAAACTAT+GGG | - | chr7_1:38306003-38306022 | Msa1018300:intron | 30.0% | |
| TATTTCTCCACAAACTTTCT+TGG | + | chr7_1:38306201-38306220 | None:intergenic | 30.0% | |
| AGAAAGTTTGTGGAGAAATA+TGG | - | chr7_1:38306201-38306220 | Msa1018300:intron | 30.0% | |
| TTTGTGGAGAAATATGGAAA+AGG | - | chr7_1:38306207-38306226 | Msa1018300:intron | 30.0% | |
| ! | AATTTCCATTTTGCACCATT+TGG | + | chr7_1:38306261-38306280 | None:intergenic | 30.0% |
| GACTCAATCTTATATACCTT+TGG | + | chr7_1:38306607-38306626 | None:intergenic | 30.0% | |
| AGCAACTTACCATAAGAAAT+CGG | + | chr7_1:38306787-38306806 | None:intergenic | 30.0% | |
| TGGTAATAGACACTTTGATT+TGG | - | chr7_1:38307228-38307247 | Msa1018300:intron | 30.0% | |
| !! | TTTGATTTGGATAAGAAGAG+AGG | - | chr7_1:38307241-38307260 | Msa1018300:intron | 30.0% |
| ! | ATCAAAATGTGGTCCTTTTA+GGG | + | chr7_1:38307326-38307345 | None:intergenic | 30.0% |
| AAGGACAATAACTTGAAAGT+TGG | - | chr7_1:38307373-38307392 | Msa1018300:intron | 30.0% | |
| ATTGTTCTACATCTCAAAGT+AGG | - | chr7_1:38307482-38307501 | Msa1018300:intron | 30.0% | |
| CTTGCTCAAAATCTTCATGA+AGG | - | chr7_1:38305324-38305343 | Msa1018300:intron | 35.0% | |
| !! | AGTTTGTTGGTCATAGTTTG+TGG | - | chr7_1:38305490-38305509 | Msa1018300:CDS | 35.0% |
| ! | GTTTGTTGGTCATAGTTTGT+GGG | - | chr7_1:38305491-38305510 | Msa1018300:CDS | 35.0% |
| TACCCAAGTTAATTACTTGC+AGG | + | chr7_1:38305758-38305777 | None:intergenic | 35.0% | |
| GACATATTGGACTACCAAAA+TGG | - | chr7_1:38305794-38305813 | Msa1018300:intron | 35.0% | |
| TATTGGACTACCAAAATGGA+AGG | - | chr7_1:38305798-38305817 | Msa1018300:intron | 35.0% | |
| ATTGGACTACCAAAATGGAA+GGG | - | chr7_1:38305799-38305818 | Msa1018300:intron | 35.0% | |
| ! | TATTTACAAGTCCCCTTTTG+AGG | + | chr7_1:38305934-38305953 | None:intergenic | 35.0% |
| TCATTAGGCTACAAATTTGG+TGG | + | chr7_1:38305997-38306016 | None:intergenic | 35.0% | |
| TTTGGTAAAAAGTGATGGCA+AGG | - | chr7_1:38306284-38306303 | Msa1018300:CDS | 35.0% | |
| TAAAAAGTGATGGCAAGGTA+TGG | - | chr7_1:38306289-38306308 | Msa1018300:CDS | 35.0% | |
| AGGTATGGTTTGAAAAAGGT+TGG | - | chr7_1:38306304-38306323 | Msa1018300:CDS | 35.0% | |
| GATATTTGAACAGCAGAAGA+TGG | + | chr7_1:38306365-38306384 | None:intergenic | 35.0% | |
| ! | AGCTTTTCTCTTTTGACCAT+TGG | + | chr7_1:38306478-38306497 | None:intergenic | 35.0% |
| !! | TGGTTGATGGAATTCAAAAG+AGG | + | chr7_1:38306505-38306524 | None:intergenic | 35.0% |
| TGAAGTTGAGAAATTGCCAA+AGG | - | chr7_1:38306551-38306570 | Msa1018300:CDS | 35.0% | |
| TATTTCCCGTTGATACCAAT+TGG | - | chr7_1:38306916-38306935 | Msa1018300:intron | 35.0% | |
| AAGAACCAATTGGTATCAAC+GGG | + | chr7_1:38306924-38306943 | None:intergenic | 35.0% | |
| CAAGAACCAATTGGTATCAA+CGG | + | chr7_1:38306925-38306944 | None:intergenic | 35.0% | |
| AAAGAATTTCCCAGCTCAAA+TGG | - | chr7_1:38306950-38306969 | Msa1018300:intron | 35.0% | |
| CAGAATATACCACGTATGTT+TGG | - | chr7_1:38307208-38307227 | Msa1018300:intron | 35.0% | |
| TGTCTATTACCAAACATACG+TGG | + | chr7_1:38307220-38307239 | None:intergenic | 35.0% | |
| ! | GATCAAAATGTGGTCCTTTT+AGG | + | chr7_1:38307327-38307346 | None:intergenic | 35.0% |
| !! | ATTTTGATCTCACAACTGGA+TGG | - | chr7_1:38307338-38307357 | Msa1018300:intron | 35.0% |
| AGAAGCTTCTTCTTTCACTT+GGG | + | chr7_1:38307592-38307611 | None:intergenic | 35.0% | |
| CTTGCTCAAAATCTTCATGA+AGG | - | chr7_1:38305324-38305343 | Msa1018300:intron | 35.0% | |
| !! | AGTTTGTTGGTCATAGTTTG+TGG | - | chr7_1:38305490-38305509 | Msa1018300:CDS | 35.0% |
| ! | GTTTGTTGGTCATAGTTTGT+GGG | - | chr7_1:38305491-38305510 | Msa1018300:CDS | 35.0% |
| TACCCAAGTTAATTACTTGC+AGG | + | chr7_1:38305758-38305777 | None:intergenic | 35.0% | |
| GACATATTGGACTACCAAAA+TGG | - | chr7_1:38305794-38305813 | Msa1018300:intron | 35.0% | |
| TATTGGACTACCAAAATGGA+AGG | - | chr7_1:38305798-38305817 | Msa1018300:intron | 35.0% | |
| ATTGGACTACCAAAATGGAA+GGG | - | chr7_1:38305799-38305818 | Msa1018300:intron | 35.0% | |
| ! | TATTTACAAGTCCCCTTTTG+AGG | + | chr7_1:38305934-38305953 | None:intergenic | 35.0% |
| TCATTAGGCTACAAATTTGG+TGG | + | chr7_1:38305997-38306016 | None:intergenic | 35.0% | |
| TTTGGTAAAAAGTGATGGCA+AGG | - | chr7_1:38306284-38306303 | Msa1018300:CDS | 35.0% | |
| TAAAAAGTGATGGCAAGGTA+TGG | - | chr7_1:38306289-38306308 | Msa1018300:CDS | 35.0% | |
| AGGTATGGTTTGAAAAAGGT+TGG | - | chr7_1:38306304-38306323 | Msa1018300:CDS | 35.0% | |
| GATATTTGAACAGCAGAAGA+TGG | + | chr7_1:38306365-38306384 | None:intergenic | 35.0% | |
| ! | AGCTTTTCTCTTTTGACCAT+TGG | + | chr7_1:38306478-38306497 | None:intergenic | 35.0% |
| !! | TGGTTGATGGAATTCAAAAG+AGG | + | chr7_1:38306505-38306524 | None:intergenic | 35.0% |
| TGAAGTTGAGAAATTGCCAA+AGG | - | chr7_1:38306551-38306570 | Msa1018300:CDS | 35.0% | |
| TATTTCCCGTTGATACCAAT+TGG | - | chr7_1:38306916-38306935 | Msa1018300:intron | 35.0% | |
| AAGAACCAATTGGTATCAAC+GGG | + | chr7_1:38306924-38306943 | None:intergenic | 35.0% | |
| CAAGAACCAATTGGTATCAA+CGG | + | chr7_1:38306925-38306944 | None:intergenic | 35.0% | |
| AAAGAATTTCCCAGCTCAAA+TGG | - | chr7_1:38306950-38306969 | Msa1018300:intron | 35.0% | |
| CAGAATATACCACGTATGTT+TGG | - | chr7_1:38307208-38307227 | Msa1018300:intron | 35.0% | |
| TGTCTATTACCAAACATACG+TGG | + | chr7_1:38307220-38307239 | None:intergenic | 35.0% | |
| ! | GATCAAAATGTGGTCCTTTT+AGG | + | chr7_1:38307327-38307346 | None:intergenic | 35.0% |
| !! | ATTTTGATCTCACAACTGGA+TGG | - | chr7_1:38307338-38307357 | Msa1018300:intron | 35.0% |
| AGAAGCTTCTTCTTTCACTT+GGG | + | chr7_1:38307592-38307611 | None:intergenic | 35.0% | |
| GACGTCTGACCTAACAATTT+CGG | + | chr7_1:38305590-38305609 | None:intergenic | 40.0% | |
| ! | TATCAATCGCCCTTCCATTT+TGG | + | chr7_1:38305811-38305830 | None:intergenic | 40.0% |
| TGCAGTCCGTTTACTCAATT+TGG | - | chr7_1:38306030-38306049 | Msa1018300:intron | 40.0% | |
| AGTGGGCCAAATTGAGTAAA+CGG | + | chr7_1:38306039-38306058 | None:intergenic | 40.0% | |
| TTTACTCAATTTGGCCCACT+TGG | - | chr7_1:38306039-38306058 | Msa1018300:intron | 40.0% | |
| CTAACTTGACCAATCCAAGT+GGG | + | chr7_1:38306056-38306075 | None:intergenic | 40.0% | |
| !! | TTGGATTGGTCAAGTTAGGT+CGG | - | chr7_1:38306058-38306077 | Msa1018300:intron | 40.0% |
| GATGATGCCAAGAAAGTTTG+TGG | - | chr7_1:38306191-38306210 | Msa1018300:CDS | 40.0% | |
| AGACTCCAAATGGTGCAAAA+TGG | - | chr7_1:38306253-38306272 | Msa1018300:intron | 40.0% | |
| GGCAAGGTATGGTTTGAAAA+AGG | - | chr7_1:38306300-38306319 | Msa1018300:CDS | 40.0% | |
| ! | TTAGCTGCAACTCTTTGGAA+TGG | + | chr7_1:38306447-38306466 | None:intergenic | 40.0% |
| !!! | CCTTTTTAGCTGCAACTCTT+TGG | + | chr7_1:38306452-38306471 | None:intergenic | 40.0% |
| CCAAAGAGTTGCAGCTAAAA+AGG | - | chr7_1:38306449-38306468 | Msa1018300:CDS | 40.0% | |
| TTCCATCAACCACGTGAAAT+AGG | - | chr7_1:38306513-38306532 | Msa1018300:CDS | 40.0% | |
| TTCCTATTTCACGTGGTTGA+TGG | + | chr7_1:38306518-38306537 | None:intergenic | 40.0% | |
| TGATGCAAAGTTGCTACCTT+TGG | + | chr7_1:38306570-38306589 | None:intergenic | 40.0% | |
| CTTTCTCGACAAGAACCAAT+TGG | + | chr7_1:38306934-38306953 | None:intergenic | 40.0% | |
| AATTTCCCAGCTCAAATGGA+GGG | - | chr7_1:38306954-38306973 | Msa1018300:intron | 40.0% | |
| ATCCTGATTAGGTACTTTGC+AGG | + | chr7_1:38307301-38307320 | None:intergenic | 40.0% | |
| !!! | CTTTTAGGGTCATCCTGATT+AGG | + | chr7_1:38307312-38307331 | None:intergenic | 40.0% |
| CTAATCAGGATGACCCTAAA+AGG | - | chr7_1:38307310-38307329 | Msa1018300:intron | 40.0% | |
| CCAGTTGTGAGATCAAAATG+TGG | + | chr7_1:38307337-38307356 | None:intergenic | 40.0% | |
| !! | CCACATTTTGATCTCACAAC+TGG | - | chr7_1:38307334-38307353 | Msa1018300:intron | 40.0% |
| GAGAAGCTTCTTCTTTCACT+TGG | + | chr7_1:38307593-38307612 | None:intergenic | 40.0% | |
| GTGAAAGAAGAAGCTTCTCA+AGG | - | chr7_1:38307594-38307613 | Msa1018300:CDS | 40.0% | |
| GACGTCTGACCTAACAATTT+CGG | + | chr7_1:38305590-38305609 | None:intergenic | 40.0% | |
| ! | TATCAATCGCCCTTCCATTT+TGG | + | chr7_1:38305811-38305830 | None:intergenic | 40.0% |
| TGCAGTCCGTTTACTCAATT+TGG | - | chr7_1:38306030-38306049 | Msa1018300:intron | 40.0% | |
| AGTGGGCCAAATTGAGTAAA+CGG | + | chr7_1:38306039-38306058 | None:intergenic | 40.0% | |
| TTTACTCAATTTGGCCCACT+TGG | - | chr7_1:38306039-38306058 | Msa1018300:intron | 40.0% | |
| CTAACTTGACCAATCCAAGT+GGG | + | chr7_1:38306056-38306075 | None:intergenic | 40.0% | |
| !! | TTGGATTGGTCAAGTTAGGT+CGG | - | chr7_1:38306058-38306077 | Msa1018300:intron | 40.0% |
| GATGATGCCAAGAAAGTTTG+TGG | - | chr7_1:38306191-38306210 | Msa1018300:CDS | 40.0% | |
| AGACTCCAAATGGTGCAAAA+TGG | - | chr7_1:38306253-38306272 | Msa1018300:intron | 40.0% | |
| GGCAAGGTATGGTTTGAAAA+AGG | - | chr7_1:38306300-38306319 | Msa1018300:CDS | 40.0% | |
| ! | TTAGCTGCAACTCTTTGGAA+TGG | + | chr7_1:38306447-38306466 | None:intergenic | 40.0% |
| !!! | CCTTTTTAGCTGCAACTCTT+TGG | + | chr7_1:38306452-38306471 | None:intergenic | 40.0% |
| CCAAAGAGTTGCAGCTAAAA+AGG | - | chr7_1:38306449-38306468 | Msa1018300:CDS | 40.0% | |
| TTCCATCAACCACGTGAAAT+AGG | - | chr7_1:38306513-38306532 | Msa1018300:CDS | 40.0% | |
| TTCCTATTTCACGTGGTTGA+TGG | + | chr7_1:38306518-38306537 | None:intergenic | 40.0% | |
| TGATGCAAAGTTGCTACCTT+TGG | + | chr7_1:38306570-38306589 | None:intergenic | 40.0% | |
| CTTTCTCGACAAGAACCAAT+TGG | + | chr7_1:38306934-38306953 | None:intergenic | 40.0% | |
| AATTTCCCAGCTCAAATGGA+GGG | - | chr7_1:38306954-38306973 | Msa1018300:intron | 40.0% | |
| ATCCTGATTAGGTACTTTGC+AGG | + | chr7_1:38307301-38307320 | None:intergenic | 40.0% | |
| !!! | CTTTTAGGGTCATCCTGATT+AGG | + | chr7_1:38307312-38307331 | None:intergenic | 40.0% |
| CTAATCAGGATGACCCTAAA+AGG | - | chr7_1:38307310-38307329 | Msa1018300:intron | 40.0% | |
| CCAGTTGTGAGATCAAAATG+TGG | + | chr7_1:38307337-38307356 | None:intergenic | 40.0% | |
| !! | CCACATTTTGATCTCACAAC+TGG | - | chr7_1:38307334-38307353 | Msa1018300:intron | 40.0% |
| GAGAAGCTTCTTCTTTCACT+TGG | + | chr7_1:38307593-38307612 | None:intergenic | 40.0% | |
| GTGAAAGAAGAAGCTTCTCA+AGG | - | chr7_1:38307594-38307613 | Msa1018300:CDS | 40.0% | |
| GTAGCGACATAGATGAGTAG+AGG | + | chr7_1:38305532-38305551 | None:intergenic | 45.0% | |
| GTTAGGTCAGACGTCATGAT+CGG | - | chr7_1:38305595-38305614 | Msa1018300:CDS | 45.0% | |
| TTAGGTCAGACGTCATGATC+GGG | - | chr7_1:38305596-38305615 | Msa1018300:CDS | 45.0% | |
| AGCCTAATGAAACTATGGGC+TGG | - | chr7_1:38306007-38306026 | Msa1018300:intron | 45.0% | |
| CACCAGCCCATAGTTTCATT+AGG | + | chr7_1:38306012-38306031 | None:intergenic | 45.0% | |
| TCAATTTGGCCCACTTGGAT+TGG | - | chr7_1:38306044-38306063 | Msa1018300:intron | 45.0% | |
| CCTAACTTGACCAATCCAAG+TGG | + | chr7_1:38306057-38306076 | None:intergenic | 45.0% | |
| !! | CCACTTGGATTGGTCAAGTT+AGG | - | chr7_1:38306054-38306073 | Msa1018300:intron | 45.0% |
| ATTGGTCAAGTTAGGTCGGA+CGG | - | chr7_1:38306062-38306081 | Msa1018300:intron | 45.0% | |
| GATCATCACTCTCTAGCTGA+TGG | - | chr7_1:38306339-38306358 | Msa1018300:CDS | 45.0% | |
| GCAGCTAAAAAGGTCTCCAA+TGG | - | chr7_1:38306459-38306478 | Msa1018300:CDS | 45.0% | |
| CCATTGCTTCCTATTTCACG+TGG | + | chr7_1:38306525-38306544 | None:intergenic | 45.0% | |
| CCACGTGAAATAGGAAGCAA+TGG | - | chr7_1:38306522-38306541 | Msa1018300:CDS | 45.0% | |
| GTAGCAACTTTGCATCATGC+TGG | - | chr7_1:38306573-38306592 | Msa1018300:CDS | 45.0% | |
| CGCATGACAACAACAAAGGA+TGG | + | chr7_1:38306746-38306765 | None:intergenic | 45.0% | |
| TGCACGCATGACAACAACAA+AGG | + | chr7_1:38306750-38306769 | None:intergenic | 45.0% | |
| !! | CGTGGAACACCGATTTCTTA+TGG | - | chr7_1:38306775-38306794 | Msa1018300:intron | 45.0% |
| GAATTTCCCAGCTCAAATGG+AGG | - | chr7_1:38306953-38306972 | Msa1018300:intron | 45.0% | |
| TGATCTCACAACTGGATGGA+AGG | - | chr7_1:38307342-38307361 | Msa1018300:intron | 45.0% | |
| !! | TGGATGGAAGGCATTTGCAA+AGG | - | chr7_1:38307354-38307373 | Msa1018300:intron | 45.0% |
| GTAGCGACATAGATGAGTAG+AGG | + | chr7_1:38305532-38305551 | None:intergenic | 45.0% | |
| GTTAGGTCAGACGTCATGAT+CGG | - | chr7_1:38305595-38305614 | Msa1018300:CDS | 45.0% | |
| TTAGGTCAGACGTCATGATC+GGG | - | chr7_1:38305596-38305615 | Msa1018300:CDS | 45.0% | |
| AGCCTAATGAAACTATGGGC+TGG | - | chr7_1:38306007-38306026 | Msa1018300:intron | 45.0% | |
| CACCAGCCCATAGTTTCATT+AGG | + | chr7_1:38306012-38306031 | None:intergenic | 45.0% | |
| TCAATTTGGCCCACTTGGAT+TGG | - | chr7_1:38306044-38306063 | Msa1018300:intron | 45.0% | |
| CCTAACTTGACCAATCCAAG+TGG | + | chr7_1:38306057-38306076 | None:intergenic | 45.0% | |
| !! | CCACTTGGATTGGTCAAGTT+AGG | - | chr7_1:38306054-38306073 | Msa1018300:intron | 45.0% |
| ATTGGTCAAGTTAGGTCGGA+CGG | - | chr7_1:38306062-38306081 | Msa1018300:intron | 45.0% | |
| GATCATCACTCTCTAGCTGA+TGG | - | chr7_1:38306339-38306358 | Msa1018300:CDS | 45.0% | |
| GCAGCTAAAAAGGTCTCCAA+TGG | - | chr7_1:38306459-38306478 | Msa1018300:CDS | 45.0% | |
| CCATTGCTTCCTATTTCACG+TGG | + | chr7_1:38306525-38306544 | None:intergenic | 45.0% | |
| CCACGTGAAATAGGAAGCAA+TGG | - | chr7_1:38306522-38306541 | Msa1018300:CDS | 45.0% | |
| GTAGCAACTTTGCATCATGC+TGG | - | chr7_1:38306573-38306592 | Msa1018300:CDS | 45.0% | |
| CGCATGACAACAACAAAGGA+TGG | + | chr7_1:38306746-38306765 | None:intergenic | 45.0% | |
| TGCACGCATGACAACAACAA+AGG | + | chr7_1:38306750-38306769 | None:intergenic | 45.0% | |
| !! | CGTGGAACACCGATTTCTTA+TGG | - | chr7_1:38306775-38306794 | Msa1018300:intron | 45.0% |
| GAATTTCCCAGCTCAAATGG+AGG | - | chr7_1:38306953-38306972 | Msa1018300:intron | 45.0% | |
| TGATCTCACAACTGGATGGA+AGG | - | chr7_1:38307342-38307361 | Msa1018300:intron | 45.0% | |
| !! | TGGATGGAAGGCATTTGCAA+AGG | - | chr7_1:38307354-38307373 | Msa1018300:intron | 45.0% |
| TAGGTCAGACGTCATGATCG+GGG | - | chr7_1:38305597-38305616 | Msa1018300:CDS | 50.0% | |
| TGTCATGCGTGCATCATACG+TGG | - | chr7_1:38306757-38306776 | Msa1018300:intron | 50.0% | |
| ! | GAACTACGTATGCACTGACG+AGG | - | chr7_1:38306808-38306827 | Msa1018300:intron | 50.0% |
| TAGGACCCTCCATTTGAGCT+GGG | + | chr7_1:38306962-38306981 | None:intergenic | 50.0% | |
| TTAGGACCCTCCATTTGAGC+TGG | + | chr7_1:38306963-38306982 | None:intergenic | 50.0% | |
| ! | GGCCTGCAAAGTACCTAATC+AGG | - | chr7_1:38307296-38307315 | Msa1018300:intron | 50.0% |
| TAGGTCAGACGTCATGATCG+GGG | - | chr7_1:38305597-38305616 | Msa1018300:CDS | 50.0% | |
| TGTCATGCGTGCATCATACG+TGG | - | chr7_1:38306757-38306776 | Msa1018300:intron | 50.0% | |
| ! | GAACTACGTATGCACTGACG+AGG | - | chr7_1:38306808-38306827 | Msa1018300:intron | 50.0% |
| TAGGACCCTCCATTTGAGCT+GGG | + | chr7_1:38306962-38306981 | None:intergenic | 50.0% | |
| TTAGGACCCTCCATTTGAGC+TGG | + | chr7_1:38306963-38306982 | None:intergenic | 50.0% | |
| ! | GGCCTGCAAAGTACCTAATC+AGG | - | chr7_1:38307296-38307315 | Msa1018300:intron | 50.0% |
| CATGCTGGCAGAGAGTCCAA+AGG | - | chr7_1:38306588-38306607 | Msa1018300:CDS | 55.0% | |
| CATGCTGGCAGAGAGTCCAA+AGG | - | chr7_1:38306588-38306607 | Msa1018300:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 38305273 | 38307620 | 38305273 | ID=Msa1018300;Name=Msa1018300 |
| chr7_1 | mRNA | 38305273 | 38307620 | 38305273 | ID=Msa1018300-mRNA-1;Parent=Msa1018300;Name=Msa1018300-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|5|0|315 |
| chr7_1 | exon | 38307540 | 38307620 | 38307540 | ID=Msa1018300-mRNA-1:exon:7403;Parent=Msa1018300-mRNA-1 |
| chr7_1 | exon | 38306284 | 38306701 | 38306284 | ID=Msa1018300-mRNA-1:exon:7402;Parent=Msa1018300-mRNA-1 |
| chr7_1 | exon | 38306097 | 38306218 | 38306097 | ID=Msa1018300-mRNA-1:exon:7401;Parent=Msa1018300-mRNA-1 |
| chr7_1 | exon | 38305394 | 38305682 | 38305394 | ID=Msa1018300-mRNA-1:exon:7400;Parent=Msa1018300-mRNA-1 |
| chr7_1 | exon | 38305273 | 38305310 | 38305273 | ID=Msa1018300-mRNA-1:exon:7399;Parent=Msa1018300-mRNA-1 |
| chr7_1 | CDS | 38307540 | 38307620 | 38307540 | ID=Msa1018300-mRNA-1:cds;Parent=Msa1018300-mRNA-1 |
| chr7_1 | CDS | 38306284 | 38306701 | 38306284 | ID=Msa1018300-mRNA-1:cds;Parent=Msa1018300-mRNA-1 |
| chr7_1 | CDS | 38306097 | 38306218 | 38306097 | ID=Msa1018300-mRNA-1:cds;Parent=Msa1018300-mRNA-1 |
| chr7_1 | CDS | 38305394 | 38305682 | 38305394 | ID=Msa1018300-mRNA-1:cds;Parent=Msa1018300-mRNA-1 |
| chr7_1 | CDS | 38305273 | 38305310 | 38305273 | ID=Msa1018300-mRNA-1:cds;Parent=Msa1018300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
