Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018920 | AES79015.2 | 77.000 | 100 | 23 | 0 | 520 | 619 | 431 | 530 | 1.35e-40 | 167 |
| Msa1018920 | AES79015.2 | 84.740 | 557 | 34 | 4 | 1 | 511 | 1 | 552 | 0.0 | 939 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018920 | sp|Q8GZB6|SUVH4_ARATH | 54.217 | 332 | 147 | 4 | 184 | 511 | 290 | 620 | 3.98e-120 | 373 |
| Msa1018920 | sp|Q8GZB6|SUVH4_ARATH | 57.447 | 94 | 37 | 2 | 530 | 622 | 510 | 601 | 5.39e-23 | 107 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018920 | G7KY38 | 77.000 | 100 | 23 | 0 | 520 | 619 | 431 | 530 | 6.43e-41 | 167 |
| Msa1018920 | G7KY38 | 84.740 | 557 | 34 | 4 | 1 | 511 | 1 | 552 | 0.0 | 939 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1018920 | TR | SET |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018920 | MtrunA17_Chr7g0234361 | 78.286 | 350 | 24 | 5 | 1 | 304 | 1 | 344 | 2.31e-177 | 507 |
| Msa1018920 | MtrunA17_Chr6g0476121 | 55.723 | 332 | 143 | 3 | 184 | 511 | 308 | 639 | 1.55e-121 | 374 |
| Msa1018920 | MtrunA17_Chr6g0476121 | 57.778 | 90 | 38 | 0 | 530 | 619 | 528 | 617 | 2.35e-23 | 104 |
| Msa1018920 | MtrunA17_Chr7g0252211 | 55.723 | 332 | 143 | 3 | 184 | 511 | 422 | 753 | 3.90e-121 | 377 |
| Msa1018920 | MtrunA17_Chr7g0252211 | 57.778 | 90 | 38 | 0 | 530 | 619 | 642 | 731 | 1.78e-23 | 105 |
| Msa1018920 | MtrunA17_Chr6g0476111 | 55.422 | 332 | 144 | 3 | 184 | 511 | 359 | 690 | 1.39e-120 | 373 |
| Msa1018920 | MtrunA17_Chr6g0476111 | 57.778 | 90 | 38 | 0 | 530 | 619 | 579 | 668 | 3.11e-23 | 104 |
| Msa1018920 | MtrunA17_Chr5g0399801 | 45.139 | 288 | 144 | 8 | 229 | 513 | 811 | 1087 | 7.93e-66 | 234 |
| Msa1018920 | MtrunA17_Chr5g0399801 | 51.515 | 66 | 32 | 0 | 554 | 619 | 998 | 1063 | 4.85e-14 | 75.9 |
| Msa1018920 | MtrunA17_Chr4g0003501 | 41.801 | 311 | 163 | 7 | 204 | 510 | 654 | 950 | 9.63e-63 | 224 |
| Msa1018920 | MtrunA17_Chr4g0003501 | 43.662 | 71 | 40 | 0 | 557 | 627 | 867 | 937 | 1.70e-13 | 73.9 |
| Msa1018920 | MtrunA17_Chr4g0003511 | 41.781 | 292 | 150 | 7 | 225 | 510 | 770 | 1047 | 4.06e-62 | 223 |
| Msa1018920 | MtrunA17_Chr4g0003511 | 46.377 | 69 | 37 | 0 | 553 | 621 | 960 | 1028 | 1.56e-14 | 77.4 |
| Msa1018920 | MtrunA17_Chr7g0255181 | 30.120 | 332 | 203 | 6 | 186 | 512 | 395 | 702 | 1.46e-44 | 169 |
| Msa1018920 | MtrunA17_Chr7g0232841 | 33.882 | 304 | 153 | 11 | 225 | 516 | 260 | 527 | 1.32e-41 | 158 |
| Msa1018920 | MtrunA17_Chr7g0232811 | 33.333 | 303 | 155 | 10 | 225 | 516 | 272 | 538 | 4.63e-41 | 157 |
| Msa1018920 | MtrunA17_Chr8g0368911 | 32.353 | 306 | 189 | 10 | 186 | 485 | 456 | 749 | 3.54e-40 | 157 |
| Msa1018920 | MtrunA17_Chr8g0354821 | 33.220 | 295 | 184 | 8 | 225 | 513 | 399 | 686 | 4.97e-40 | 155 |
| Msa1018920 | MtrunA17_Chr8g0368901 | 33.660 | 306 | 185 | 10 | 186 | 485 | 463 | 756 | 6.04e-40 | 156 |
| Msa1018920 | MtrunA17_Chr3g0080761 | 31.507 | 365 | 213 | 11 | 178 | 512 | 304 | 661 | 1.46e-39 | 154 |
| Msa1018920 | MtrunA17_Chr8g0369301 | 35.632 | 261 | 153 | 7 | 229 | 485 | 487 | 736 | 1.33e-38 | 152 |
| Msa1018920 | MtrunA17_Chr1g0163051 | 34.686 | 271 | 164 | 7 | 225 | 492 | 392 | 652 | 1.33e-38 | 151 |
| Msa1018920 | MtrunA17_Chr1g0163041 | 32.692 | 312 | 192 | 9 | 186 | 491 | 271 | 570 | 1.65e-38 | 150 |
| Msa1018920 | MtrunA17_Chr7g0232981 | 33.451 | 284 | 150 | 7 | 228 | 510 | 266 | 511 | 1.36e-36 | 143 |
| Msa1018920 | MtrunA17_Chr3g0094881 | 30.968 | 310 | 192 | 10 | 186 | 485 | 325 | 622 | 2.48e-34 | 138 |
| Msa1018920 | MtrunA17_Chr1g0170651 | 34.091 | 308 | 151 | 11 | 214 | 512 | 279 | 543 | 5.08e-33 | 134 |
| Msa1018920 | MtrunA17_Chr6g0467401 | 29.206 | 315 | 195 | 11 | 184 | 485 | 264 | 563 | 1.29e-31 | 129 |
| Msa1018920 | MtrunA17_Chr6g0467381 | 29.206 | 315 | 195 | 11 | 184 | 485 | 264 | 563 | 1.85e-31 | 129 |
| Msa1018920 | MtrunA17_Chr1g0183321 | 30.725 | 345 | 153 | 14 | 229 | 515 | 430 | 746 | 2.88e-31 | 129 |
| Msa1018920 | MtrunA17_Chr6g0467421 | 29.206 | 315 | 195 | 11 | 184 | 485 | 264 | 563 | 4.52e-31 | 128 |
| Msa1018920 | MtrunA17_Chr6g0467531 | 28.707 | 317 | 194 | 12 | 184 | 485 | 264 | 563 | 7.65e-31 | 127 |
| Msa1018920 | MtrunA17_Chr6g0467411 | 29.630 | 270 | 169 | 9 | 225 | 485 | 224 | 481 | 3.56e-27 | 115 |
| Msa1018920 | MtrunA17_Chr8g0373821 | 35.897 | 195 | 97 | 3 | 297 | 486 | 346 | 517 | 1.77e-26 | 114 |
| Msa1018920 | MtrunA17_Chr1g0190311 | 30.435 | 345 | 149 | 14 | 228 | 511 | 326 | 640 | 2.45e-26 | 114 |
| Msa1018920 | MtrunA17_Chr5g0403241 | 29.836 | 305 | 149 | 10 | 225 | 488 | 1207 | 1487 | 3.44e-26 | 114 |
| Msa1018920 | MtrunA17_Chr4g0075321 | 33.945 | 218 | 119 | 5 | 296 | 512 | 868 | 1061 | 1.42e-25 | 112 |
| Msa1018920 | MtrunA17_Chr7g0262001 | 27.811 | 338 | 170 | 11 | 229 | 515 | 388 | 702 | 1.19e-24 | 109 |
| Msa1018920 | MtrunA17_Chr7g0232751 | 48.889 | 90 | 44 | 1 | 427 | 516 | 31 | 118 | 9.79e-24 | 96.7 |
| Msa1018920 | MtrunA17_Chr2g0306961 | 29.851 | 201 | 132 | 4 | 287 | 485 | 269 | 462 | 1.20e-22 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018920 | AT5G13960.2 | 54.217 | 332 | 147 | 4 | 184 | 511 | 156 | 486 | 1.06e-121 | 370 |
| Msa1018920 | AT5G13960.2 | 57.447 | 94 | 37 | 2 | 530 | 622 | 376 | 467 | 3.55e-24 | 107 |
| Msa1018920 | AT5G13960.1 | 54.217 | 332 | 147 | 4 | 184 | 511 | 290 | 620 | 4.04e-121 | 373 |
| Msa1018920 | AT5G13960.1 | 57.447 | 94 | 37 | 2 | 530 | 622 | 510 | 601 | 5.48e-24 | 107 |
| Msa1018920 | AT2G35160.5 | 34.746 | 354 | 186 | 9 | 167 | 512 | 439 | 755 | 1.17e-53 | 196 |
| Msa1018920 | AT2G35160.2 | 34.746 | 354 | 186 | 9 | 167 | 512 | 475 | 791 | 2.27e-53 | 196 |
| Msa1018920 | AT2G35160.3 | 34.746 | 354 | 186 | 9 | 167 | 512 | 475 | 791 | 2.27e-53 | 196 |
| Msa1018920 | AT2G35160.1 | 34.746 | 354 | 186 | 9 | 167 | 512 | 475 | 791 | 2.27e-53 | 196 |
| Msa1018920 | AT2G35160.4 | 34.746 | 354 | 186 | 9 | 167 | 512 | 475 | 791 | 2.27e-53 | 196 |
| Msa1018920 | AT2G22740.2 | 39.610 | 308 | 162 | 9 | 214 | 511 | 493 | 786 | 2.55e-53 | 196 |
| Msa1018920 | AT2G22740.2 | 45.070 | 71 | 39 | 0 | 557 | 627 | 702 | 772 | 4.29e-12 | 69.7 |
| Msa1018920 | AT2G22740.1 | 39.610 | 308 | 162 | 9 | 214 | 511 | 493 | 786 | 2.55e-53 | 196 |
| Msa1018920 | AT2G22740.1 | 45.070 | 71 | 39 | 0 | 557 | 627 | 702 | 772 | 4.29e-12 | 69.7 |
| Msa1018920 | AT1G73100.1 | 29.381 | 388 | 255 | 8 | 129 | 512 | 294 | 666 | 1.24e-43 | 166 |
| Msa1018920 | AT2G33290.1 | 35.526 | 304 | 163 | 10 | 204 | 485 | 346 | 638 | 1.76e-41 | 160 |
| Msa1018920 | AT2G33290.3 | 35.526 | 304 | 163 | 10 | 204 | 485 | 346 | 638 | 1.76e-41 | 160 |
| Msa1018920 | AT2G33290.4 | 35.526 | 304 | 163 | 10 | 204 | 485 | 346 | 638 | 1.76e-41 | 160 |
| Msa1018920 | AT2G33290.2 | 35.526 | 304 | 163 | 10 | 204 | 485 | 346 | 638 | 1.76e-41 | 160 |
| Msa1018920 | AT4G13460.1 | 32.581 | 310 | 193 | 9 | 186 | 489 | 342 | 641 | 2.53e-41 | 159 |
| Msa1018920 | AT4G13460.2 | 32.581 | 310 | 193 | 9 | 186 | 489 | 342 | 641 | 2.53e-41 | 159 |
| Msa1018920 | AT5G04940.2 | 32.333 | 300 | 187 | 8 | 219 | 512 | 378 | 667 | 1.75e-39 | 154 |
| Msa1018920 | AT5G04940.1 | 32.333 | 300 | 187 | 8 | 219 | 512 | 378 | 667 | 1.75e-39 | 154 |
| Msa1018920 | AT1G17770.1 | 30.820 | 305 | 190 | 9 | 219 | 512 | 396 | 690 | 4.39e-33 | 135 |
| Msa1018920 | AT2G23740.1 | 32.537 | 335 | 168 | 14 | 210 | 513 | 1066 | 1373 | 1.54e-31 | 132 |
| Msa1018920 | AT2G23740.3 | 32.537 | 335 | 168 | 14 | 210 | 513 | 1073 | 1380 | 1.69e-31 | 131 |
| Msa1018920 | AT2G23740.6 | 32.537 | 335 | 168 | 14 | 210 | 513 | 1073 | 1380 | 1.69e-31 | 131 |
| Msa1018920 | AT2G23740.2 | 32.537 | 335 | 168 | 14 | 210 | 513 | 1073 | 1380 | 1.69e-31 | 131 |
| Msa1018920 | AT3G04380.2 | 27.679 | 336 | 167 | 10 | 229 | 511 | 119 | 431 | 2.71e-24 | 107 |
| Msa1018920 | AT3G04380.1 | 27.679 | 336 | 167 | 10 | 229 | 511 | 146 | 458 | 2.93e-24 | 107 |
| Msa1018920 | AT3G04380.3 | 27.679 | 336 | 167 | 10 | 229 | 511 | 130 | 442 | 3.45e-24 | 106 |
| Msa1018920 | AT3G04380.6 | 27.679 | 336 | 167 | 10 | 229 | 511 | 119 | 431 | 3.63e-24 | 106 |
| Msa1018920 | AT3G04380.4 | 27.679 | 336 | 167 | 10 | 229 | 511 | 146 | 458 | 3.69e-24 | 106 |
| Msa1018920 | AT3G04380.5 | 27.679 | 336 | 167 | 10 | 229 | 511 | 103 | 415 | 3.90e-24 | 106 |
| Msa1018920 | AT2G24740.1 | 29.293 | 297 | 180 | 11 | 225 | 512 | 477 | 752 | 2.85e-23 | 105 |
| Msa1018920 | AT2G23740.4 | 32.075 | 265 | 126 | 12 | 210 | 443 | 1073 | 1314 | 5.33e-21 | 98.6 |
| Msa1018920 | AT2G23740.5 | 32.075 | 265 | 126 | 12 | 210 | 443 | 1073 | 1314 | 5.33e-21 | 98.6 |
| Msa1018920 | AT3G03750.2 | 31.120 | 241 | 124 | 8 | 274 | 510 | 143 | 345 | 2.51e-20 | 93.6 |
| Msa1018920 | AT4G30860.1 | 28.000 | 200 | 102 | 6 | 313 | 512 | 305 | 462 | 6.28e-12 | 68.9 |
Find 128 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTGATGGACTTGACTTT+AGG | 0.192680 | 7_1:-39774232 | Msa1018920:CDS |
| TGCATAGATGCTGGTTCTTT+TGG | 0.193774 | 7_1:-39771149 | Msa1018920:CDS |
| CGTCCAATGTTCGTCTTTGA+TGG | 0.216021 | 7_1:-39774245 | Msa1018920:CDS |
| TGCATAGATGCTGGTTCTTT+TGG | 0.238650 | 7_1:-39768482 | Msa1018920:CDS |
| AACTGACCATACCTCTCTTA+TGG | 0.257716 | 7_1:+39774363 | None:intergenic |
| TTGGCTTTAGGTTCATTTAA+TGG | 0.273794 | 7_1:-39772448 | Msa1018920:intron |
| GTTTGCTCACAACTTCAAAA+TGG | 0.284170 | 7_1:-39774410 | Msa1018920:CDS |
| TCTTACCGCCCAACCTTTCT+TGG | 0.287241 | 7_1:+39771493 | None:intergenic |
| GAAACTTTGTTTCCACATTT+AGG | 0.290820 | 7_1:+39771647 | None:intergenic |
| CTTTGATGGACTTGACTTTA+GGG | 0.301083 | 7_1:-39774231 | Msa1018920:CDS |
| TGCTAAAGTGGGAACATATA+AGG | 0.341389 | 7_1:-39773204 | Msa1018920:intron |
| CAGGAACTCACCTATGACTA+TGG | 0.342829 | 7_1:-39770108 | Msa1018920:CDS |
| TAATATCCGTATTACCTGAT+AGG | 0.344203 | 7_1:+39768337 | None:intergenic |
| ACTGACCATACCTCTCTTAT+GGG | 0.344917 | 7_1:+39774364 | None:intergenic |
| TGGAAGTAAAGAGGAAAGTT+TGG | 0.346273 | 7_1:-39774447 | Msa1018920:CDS |
| CCAGCATCTATGCAATATTC+AGG | 0.354345 | 7_1:+39768491 | None:intergenic |
| CCAGCATCTATGCAATATTC+AGG | 0.354345 | 7_1:+39771158 | None:intergenic |
| ATGTGACATACCTCCCTATC+AGG | 0.371814 | 7_1:-39768351 | Msa1018920:intron |
| AGAAGACATACCTCCCTATC+AGG | 0.387240 | 7_1:-39771018 | Msa1018920:intron |
| AGCAAGAATCGACACAAGAT+AGG | 0.395673 | 7_1:-39773488 | Msa1018920:CDS |
| CAAGGTGTACCCTGATGAAA+TGG | 0.396172 | 7_1:-39769298 | Msa1018920:CDS |
| CACACAATCAATGGTGTAGA+TGG | 0.399488 | 7_1:-39771353 | Msa1018920:CDS |
| GCACCAGTTGTCGAGTATAT+TGG | 0.400887 | 7_1:-39771446 | Msa1018920:CDS |
| ATTGATAACGAATACGTTCC+TGG | 0.401461 | 7_1:-39773269 | Msa1018920:CDS |
| TGGAAACAAAGTTTCTCAAC+AGG | 0.404546 | 7_1:-39771639 | Msa1018920:CDS |
| AGTATCTGATAAATAAGCTT+CGG | 0.405640 | 7_1:-39773232 | Msa1018920:CDS |
| TTGCATCCCGCAGCACTAGA+TGG | 0.412772 | 7_1:+39771967 | None:intergenic |
| CATGTTGAAAAGATTGAACT+TGG | 0.416250 | 7_1:-39774467 | Msa1018920:CDS |
| GTATCTGATAAATAAGCTTC+GGG | 0.422102 | 7_1:-39773231 | Msa1018920:CDS |
| CTTACCGCCCAACCTTTCTT+GGG | 0.422197 | 7_1:+39771494 | None:intergenic |
| GATAAATTGTTTATAGGCAA+TGG | 0.426330 | 7_1:+39768545 | None:intergenic |
| TGTCCTTGTGCTAGTCATAA+TGG | 0.433090 | 7_1:-39771916 | Msa1018920:CDS |
| TGTCCTTGAGAGAAACATCT+AGG | 0.434783 | 7_1:-39774202 | Msa1018920:CDS |
| ACACATTGTACAAAGAGGTT+TGG | 0.447308 | 7_1:+39768425 | None:intergenic |
| ACACATTGTACAAAGAGGTT+TGG | 0.447308 | 7_1:+39771092 | None:intergenic |
| ACAACGGATTTGTTGCATAC+AGG | 0.451082 | 7_1:-39768075 | Msa1018920:CDS |
| TTTCATACAATAACATTGGC+AGG | 0.452872 | 7_1:-39771885 | Msa1018920:intron |
| TTCTTTAAGTTTGGTATGCA+AGG | 0.458357 | 7_1:-39772297 | Msa1018920:intron |
| ATCGTACTCCCAAGAAAGGT+TGG | 0.459933 | 7_1:-39771502 | Msa1018920:CDS |
| TACAAAGAGGAATACCTGAT+AGG | 0.463396 | 7_1:+39771004 | None:intergenic |
| TGGAGGATCATCAAAATCAT+TGG | 0.466153 | 7_1:+39772235 | None:intergenic |
| TTCTGAAAATGAGGCTATGA+TGG | 0.472623 | 7_1:-39774579 | Msa1018920:CDS |
| GATAAATTGCTTATAGGCAA+TGG | 0.479915 | 7_1:+39771212 | None:intergenic |
| GATTGTTTGCACACAATCAA+TGG | 0.481537 | 7_1:-39771362 | Msa1018920:CDS |
| ACACCAATATACTCGACAAC+TGG | 0.483092 | 7_1:+39771443 | None:intergenic |
| AGTCTTGAACTCACTCTTGT+TGG | 0.483801 | 7_1:+39774554 | None:intergenic |
| TCTTCTCAAAGAGTTGAGCT+TGG | 0.484140 | 7_1:+39774313 | None:intergenic |
| ACATGGGACTTTATCCCATC+AGG | 0.487648 | 7_1:-39771470 | Msa1018920:CDS |
| GAGTGTGTAACCATAGTCAT+AGG | 0.489551 | 7_1:+39770098 | None:intergenic |
| ACAAAGAGGAATACCTGATA+GGG | 0.490411 | 7_1:+39771005 | None:intergenic |
| GCTTCGGGAACTTGCTAAAG+TGG | 0.493084 | 7_1:-39773216 | Msa1018920:CDS |
| CTTAGCAAGGAGACGAAGAT+TGG | 0.494551 | 7_1:+39774175 | None:intergenic |
| AATATCCGTATTACCTGATA+GGG | 0.495794 | 7_1:+39768338 | None:intergenic |
| TCGTACTCCCAAGAAAGGTT+GGG | 0.500282 | 7_1:-39771501 | Msa1018920:CDS |
| AGAGGTTTGGTTCACATCCA+TGG | 0.504457 | 7_1:+39768438 | None:intergenic |
| AGAGGTTTGGTTCACATCCA+TGG | 0.504457 | 7_1:+39771105 | None:intergenic |
| CTAGATGGAACTTCAATGCT+TGG | 0.505910 | 7_1:+39771982 | None:intergenic |
| CGACAACTGGTGCACCTGAT+GGG | 0.509774 | 7_1:+39771456 | None:intergenic |
| TACTTCGAAGTAGTGATTCC+AGG | 0.513375 | 7_1:+39773251 | None:intergenic |
| GTTTCAAGATTTATCAACCA+TGG | 0.515474 | 7_1:-39771122 | Msa1018920:CDS |
| GTTTATCGTACTCCCAAGAA+AGG | 0.517387 | 7_1:-39771506 | Msa1018920:CDS |
| TCGACAACTGGTGCACCTGA+TGG | 0.518260 | 7_1:+39771455 | None:intergenic |
| CAATCTTCGTCTCCTTGCTA+AGG | 0.519599 | 7_1:-39774174 | Msa1018920:intron |
| GTTTCAAGATTTATCAACCA+TGG | 0.524532 | 7_1:-39768455 | Msa1018920:CDS |
| GTACCCTGATGAAATGGAAA+AGG | 0.529155 | 7_1:-39769292 | Msa1018920:intron |
| GAAGTTCCATCTAGTGCTGC+GGG | 0.529357 | 7_1:-39771973 | Msa1018920:CDS |
| AAACTCTTTCTTCTTCTCCA+AGG | 0.531848 | 7_1:-39772410 | Msa1018920:intron |
| CCTGAATATTGCATAGATGC+TGG | 0.535805 | 7_1:-39768491 | Msa1018920:CDS |
| CCTGAATATTGCATAGATGC+TGG | 0.535805 | 7_1:-39771158 | Msa1018920:CDS |
| CTAAGTAGAGACGATGAGCT+AGG | 0.538306 | 7_1:-39771419 | Msa1018920:CDS |
| TTTAGGTTCATTTAATGGAA+GGG | 0.538367 | 7_1:-39772443 | Msa1018920:intron |
| CTTTAGGTTCATTTAATGGA+AGG | 0.538474 | 7_1:-39772444 | Msa1018920:intron |
| CACTAAGAGTTCTGAAAATG+AGG | 0.540450 | 7_1:-39774588 | Msa1018920:CDS |
| TTTCATCAGGGTACACCTTG+TGG | 0.544186 | 7_1:+39769301 | None:intergenic |
| CTAGACATCGTGGTCGAATG+TGG | 0.546755 | 7_1:-39771689 | Msa1018920:CDS |
| GATTGAACTTGGAAGTAAAG+AGG | 0.553834 | 7_1:-39774456 | Msa1018920:CDS |
| CTAAATTAGAGGCACTGCGA+AGG | 0.554860 | 7_1:-39769338 | Msa1018920:intron |
| AAGGTTGGGCGGTAAGAACA+TGG | 0.558115 | 7_1:-39771487 | Msa1018920:CDS |
| ACTAGCACAAGGACATCTCT+TGG | 0.560065 | 7_1:+39771924 | None:intergenic |
| GCAAGAATCGACACAAGATA+GGG | 0.566361 | 7_1:-39773487 | Msa1018920:CDS |
| GGGCTTAACTTACCGACTTG+AGG | 0.566843 | 7_1:-39771618 | Msa1018920:intron |
| AAGCCTAGATGTTTCTCTCA+AGG | 0.570477 | 7_1:+39774199 | None:intergenic |
| TGTCATTCAAGTTCAAGAAG+TGG | 0.578513 | 7_1:-39774281 | Msa1018920:CDS |
| AGTCCATCAAAGACGAACAT+TGG | 0.579758 | 7_1:+39774242 | None:intergenic |
| TGAGAACACATTGTACAAAG+AGG | 0.579762 | 7_1:+39768420 | None:intergenic |
| TGAGAACACATTGTACAAAG+AGG | 0.579762 | 7_1:+39771087 | None:intergenic |
| GATAGTGTGTCTGATTCTGA+TGG | 0.580918 | 7_1:-39770075 | Msa1018920:CDS |
| TAAATTAGAGGCACTGCGAA+GGG | 0.584204 | 7_1:-39769337 | Msa1018920:intron |
| GAAGATATAATCATTTCCGT+TGG | 0.584617 | 7_1:+39771391 | None:intergenic |
| TGTGGACCGCAATGTGGATG+CGG | 0.589925 | 7_1:-39771671 | Msa1018920:CDS |
| TGCTGCGGGATGCAATTGCA+AGG | 0.591722 | 7_1:-39771959 | Msa1018920:CDS |
| TCAATGTCATTGTGGTGCAA+AGG | 0.596456 | 7_1:-39770037 | Msa1018920:CDS |
| GTATGCAAGGACATTAGCAA+TGG | 0.598177 | 7_1:-39772284 | Msa1018920:CDS |
| AATGTTATTGTATGAAAACT+CGG | 0.598679 | 7_1:+39771891 | None:intergenic |
| TTACCTGTGGGTGCAACTGG+AGG | 0.602916 | 7_1:+39772218 | None:intergenic |
| CTTCGGGAACTTGCTAAAGT+GGG | 0.602929 | 7_1:-39773215 | Msa1018920:CDS |
| TATTTCCCATAAGAGAGGTA+TGG | 0.605924 | 7_1:-39774369 | Msa1018920:CDS |
| GATCCTCCAGTTGCACCCAC+AGG | 0.606455 | 7_1:-39772221 | Msa1018920:intron |
| AAGTTTGGTATCAACAACAA+AGG | 0.612619 | 7_1:-39774432 | Msa1018920:CDS |
| AGCACCACACGAGCTAGTCT+AGG | 0.615183 | 7_1:+39768383 | None:intergenic |
| AGCACTACACGAGCTAGTCT+AGG | 0.619841 | 7_1:+39771050 | None:intergenic |
| CATTCGACCACGATGTCTAG+AGG | 0.624366 | 7_1:+39771692 | None:intergenic |
| CAATGGTGTAGATGGAAGAG+AGG | 0.625940 | 7_1:-39771345 | Msa1018920:intron |
| TTTGATGGACTTGACTTTAG+GGG | 0.626842 | 7_1:-39774230 | Msa1018920:CDS |
| ATCCGTATTACCTGATAGGG+AGG | 0.627756 | 7_1:+39768341 | None:intergenic |
| TATAATATTTACAACAGCAG+CGG | 0.628158 | 7_1:-39774509 | Msa1018920:CDS |
| TGTGGATGCGGACCTAAATG+TGG | 0.629564 | 7_1:-39771659 | Msa1018920:CDS |
| GATGATATTTCCCATAAGAG+AGG | 0.634933 | 7_1:-39774374 | Msa1018920:CDS |
| TGAAGTTCCATCTAGTGCTG+CGG | 0.634941 | 7_1:-39771974 | Msa1018920:CDS |
| ATTGTAGAATGACCTCAAGT+CGG | 0.636167 | 7_1:+39771606 | None:intergenic |
| TTGTATCACACACCTTAGCA+AGG | 0.638217 | 7_1:+39774162 | None:intergenic |
| GGTCTTGATGCACTTCCACA+AGG | 0.639379 | 7_1:-39769316 | Msa1018920:CDS |
| AAACAGCTTCAATGTCATTG+TGG | 0.646249 | 7_1:-39770045 | Msa1018920:CDS |
| AAGAGGAATACCTGATAGGG+AGG | 0.649275 | 7_1:+39771008 | None:intergenic |
| CTTGAACTTGAATGACAGCG+AGG | 0.651390 | 7_1:+39774287 | None:intergenic |
| GCTGCGGGATGCAATTGCAA+GGG | 0.655088 | 7_1:-39771958 | Msa1018920:CDS |
| AGGTTGGGCGGTAAGAACAT+GGG | 0.665196 | 7_1:-39771486 | Msa1018920:CDS |
| AGATCCTAGACTAGCTCGTG+TGG | 0.665227 | 7_1:-39768387 | Msa1018920:CDS |
| TACTCCCAAGAAAGGTTGGG+CGG | 0.669811 | 7_1:-39771498 | Msa1018920:CDS |
| GTCGAATGTGGACCGCAATG+TGG | 0.680163 | 7_1:-39771677 | Msa1018920:CDS |
| GGAAACAAAGTTTCTCAACA+GGG | 0.682009 | 7_1:-39771638 | Msa1018920:CDS |
| TTAGGTCCGCATCCACATTG+CGG | 0.684443 | 7_1:+39771665 | None:intergenic |
| GTTGTCGTTTCATTTGACAA+CGG | 0.702901 | 7_1:-39768091 | Msa1018920:CDS |
| GATGAGCTAGGAAGTGCCAA+CGG | 0.706121 | 7_1:-39771407 | Msa1018920:CDS |
| GAGCCATTATGACTAGCACA+AGG | 0.716781 | 7_1:+39771913 | None:intergenic |
| GAGCTAGTCTAGGATCTCTG+TGG | 0.733830 | 7_1:+39768393 | None:intergenic |
| GAGCTAGTCTAGGATCTCTG+TGG | 0.733830 | 7_1:+39771060 | None:intergenic |
| GATCGAGCCTCTAGACATCG+TGG | 0.739663 | 7_1:-39771699 | Msa1018920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTGATTTTATTAGTTTT+TGG | - | chr7_1:39769089-39769108 | Msa1018920:intron | 10.0% |
| !! | TAAAATATGTATGAAATTTA+GGG | - | chr7_1:39771364-39771383 | Msa1018920:CDS | 10.0% |
| !!! | ATAAATTTTATTTTGAAAGA+AGG | - | chr7_1:39772364-39772383 | Msa1018920:intron | 10.0% |
| !!! | TTAATTATTTTCATACATTT+TGG | - | chr7_1:39772455-39772474 | Msa1018920:intron | 10.0% |
| !!! | TAATTATTTTCATACATTTT+GGG | - | chr7_1:39772456-39772475 | Msa1018920:intron | 10.0% |
| !! | GTAAAAATTTAATAAACAAT+TGG | - | chr7_1:39772509-39772528 | Msa1018920:intron | 10.0% |
| !! | ATAAATGTTTATTTATATGT+AGG | + | chr7_1:39773192-39773211 | None:intergenic | 10.0% |
| !! | ATATATACCTAAATATATAA+TGG | - | chr7_1:39773446-39773465 | Msa1018920:intron | 10.0% |
| !! | AAAAAAACCATTATATATTT+AGG | + | chr7_1:39773456-39773475 | None:intergenic | 10.0% |
| !!! | ATATATAATGGTTTTTTTTA+TGG | - | chr7_1:39773458-39773477 | Msa1018920:CDS | 10.0% |
| !! | TATTGTTATAAAATCATATT+TGG | - | chr7_1:39773675-39773694 | Msa1018920:intron | 10.0% |
| !!! | AATTTGTTTAAGATAATTTA+TGG | - | chr7_1:39773812-39773831 | Msa1018920:intron | 10.0% |
| !! | ATAAAATATGTATGAAATTT+AGG | - | chr7_1:39774030-39774049 | Msa1018920:intron | 10.0% |
| !! | TAAAATATGTATGAAATTTA+GGG | - | chr7_1:39771364-39771383 | Msa1018920:CDS | 10.0% |
| !! | TGAAATGAAATATAATTAAA+AGG | - | chr7_1:39774402-39774421 | Msa1018920:CDS | 10.0% |
| !! | GAAATGAAATATAATTAAAA+GGG | - | chr7_1:39774403-39774422 | Msa1018920:CDS | 10.0% |
| !! | ATTGTATTTATACAATTATG+AGG | - | chr7_1:39768784-39768803 | Msa1018920:intron | 15.0% |
| !!! | GTTTTTGCATTTTTAAAAAA+GGG | + | chr7_1:39770489-39770508 | None:intergenic | 15.0% |
| !!! | TGTTTTTGCATTTTTAAAAA+AGG | + | chr7_1:39770490-39770509 | None:intergenic | 15.0% |
| !!! | TCATGATGTTTTAAAATTTT+AGG | - | chr7_1:39770619-39770638 | Msa1018920:intron | 15.0% |
| !! | TTACATATTATAAACATCAA+TGG | + | chr7_1:39771100-39771119 | None:intergenic | 15.0% |
| !! | GTAAAATATGTATGAAATTT+AGG | - | chr7_1:39771363-39771382 | Msa1018920:CDS | 15.0% |
| !! | TATTGTTAATATAATCGATA+TGG | + | chr7_1:39772034-39772053 | None:intergenic | 15.0% |
| !! | AAAAAATAACAGTATTAAGA+CGG | - | chr7_1:39772260-39772279 | Msa1018920:CDS | 15.0% |
| !!! | AGAAATTTTATTTTGAAAGA+AGG | - | chr7_1:39772317-39772336 | Msa1018920:intron | 15.0% |
| !! | TGCATTATAAAATAGTATAA+GGG | - | chr7_1:39772914-39772933 | Msa1018920:intron | 15.0% |
| !! | TCAATACATAAATAAAATAC+AGG | - | chr7_1:39772946-39772965 | Msa1018920:intron | 15.0% |
| !! | CAATACATAAATAAAATACA+GGG | - | chr7_1:39772947-39772966 | Msa1018920:intron | 15.0% |
| !!! | TTTTTTTTTAACAAATTGTG+AGG | - | chr7_1:39773289-39773308 | Msa1018920:intron | 15.0% |
| !!! | TGTTTTTGAAATATACATAT+TGG | + | chr7_1:39773742-39773761 | None:intergenic | 15.0% |
| !!! | TTTTCAGATAAATTGTTTAT+AGG | + | chr7_1:39774119-39774138 | None:intergenic | 15.0% |
| !! | TAAACAATTTATCTGAAAAA+AGG | - | chr7_1:39774120-39774139 | Msa1018920:intron | 15.0% |
| !! | AAACAATTTATCTGAAAAAA+GGG | - | chr7_1:39774121-39774140 | Msa1018920:intron | 15.0% |
| !! | ACATAAATAATATGCAACAT+TGG | + | chr7_1:39768561-39768580 | None:intergenic | 20.0% |
| !! | TGTAGTAAGATGTATAAATA+TGG | - | chr7_1:39768724-39768743 | Msa1018920:intron | 20.0% |
| !!! | TTTCGTTGTTTTTAGTTTTT+AGG | - | chr7_1:39769260-39769279 | Msa1018920:intron | 20.0% |
| !! | AAAATTAAGATAGTATCATG+AGG | + | chr7_1:39769327-39769346 | None:intergenic | 20.0% |
| !! | GTGATGATATAGAAAATATT+TGG | + | chr7_1:39769756-39769775 | None:intergenic | 20.0% |
| !! | TGTAATTAGTGTTAGAATTT+GGG | - | chr7_1:39769827-39769846 | Msa1018920:intron | 20.0% |
| !! | TGCAAAATCAATTTAATAAG+AGG | - | chr7_1:39769869-39769888 | Msa1018920:intron | 20.0% |
| !! | ATTAGAATACGAAATATAAG+TGG | + | chr7_1:39770180-39770199 | None:intergenic | 20.0% |
| !! | TCGTATTCTAATATTCAATT+TGG | - | chr7_1:39770188-39770207 | Msa1018920:intron | 20.0% |
| !!! | GAATATTGTTTCTTTAAGTT+TGG | - | chr7_1:39770349-39770368 | Msa1018920:intron | 20.0% |
| !!! | ATATTTTTTGTTTTACCTGT+GGG | + | chr7_1:39770452-39770471 | None:intergenic | 20.0% |
| !! | GTAAAACAAAAAATATGAGA+TGG | - | chr7_1:39770456-39770475 | Msa1018920:intron | 20.0% |
| !! | AATGTTATTGTATGAAAACT+CGG | + | chr7_1:39770767-39770786 | None:intergenic | 20.0% |
| !!! | TTTTCAGATAAATTGCTTAT+AGG | + | chr7_1:39771452-39771471 | None:intergenic | 20.0% |
| !! | TAAGCAATTTATCTGAAAAA+AGG | - | chr7_1:39771453-39771472 | Msa1018920:CDS | 20.0% |
| !! | AAGCAATTTATCTGAAAAAA+GGG | - | chr7_1:39771454-39771473 | Msa1018920:CDS | 20.0% |
| !! | TTAAAATCCTTATTACAAAG+AGG | + | chr7_1:39771667-39771686 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCCAAACATGA+TGG | - | chr7_1:39771732-39771751 | Msa1018920:intron | 20.0% |
| !! | TTAAAATGGAAATTTAAAGG+GGG | + | chr7_1:39771807-39771826 | None:intergenic | 20.0% |
| !! | GTTAAAATGGAAATTTAAAG+GGG | + | chr7_1:39771808-39771827 | None:intergenic | 20.0% |
| !! | GGTTAAAATGGAAATTTAAA+GGG | + | chr7_1:39771809-39771828 | None:intergenic | 20.0% |
| !! | TGGTTAAAATGGAAATTTAA+AGG | + | chr7_1:39771810-39771829 | None:intergenic | 20.0% |
| !! | AAATAATACACACCTAAATT+GGG | + | chr7_1:39772179-39772198 | None:intergenic | 20.0% |
| !! | TAAATATATTAACACATAGC+CGG | + | chr7_1:39772234-39772253 | None:intergenic | 20.0% |
| !! | GTGCATTATAAAATAGTATA+AGG | - | chr7_1:39772913-39772932 | Msa1018920:intron | 20.0% |
| !! | AAAATTGTCAAGAATATAAC+GGG | + | chr7_1:39772994-39773013 | None:intergenic | 20.0% |
| !! | GAAAATTGTCAAGAATATAA+CGG | + | chr7_1:39772995-39773014 | None:intergenic | 20.0% |
| !!! | TGTTTTTGTTTTTTGAAGAA+CGG | - | chr7_1:39773149-39773168 | Msa1018920:intron | 20.0% |
| !! | CATAATATATGCAAAATTCA+AGG | + | chr7_1:39773499-39773518 | None:intergenic | 20.0% |
| !! | ATCAAATGTATATAGTATTC+AGG | + | chr7_1:39773626-39773645 | None:intergenic | 20.0% |
| !! | CATTATCCATCTATAATATT+AGG | - | chr7_1:39773851-39773870 | Msa1018920:intron | 20.0% |
| !! | AAATGACCTAATATTATAGA+TGG | + | chr7_1:39773860-39773879 | None:intergenic | 20.0% |
| !! | ATGAAATATAATTAAAAGGG+TGG | - | chr7_1:39774406-39774425 | Msa1018920:CDS | 20.0% |
| ! | TATAATATTTACAACAGCAG+CGG | - | chr7_1:39768146-39768165 | Msa1018920:intron | 25.0% |
| !! | TTCAATCTTTTCAACATGTT+GGG | + | chr7_1:39768186-39768205 | None:intergenic | 25.0% |
| !!! | AAATCTCAAGTAATTTGCTT+TGG | + | chr7_1:39768899-39768918 | None:intergenic | 25.0% |
| !! | CGTATTAGTTTCTTTCTTTA+TGG | - | chr7_1:39768990-39769009 | Msa1018920:intron | 25.0% |
| ! | TCAACTAAGAAATTAACTCT+AGG | + | chr7_1:39769047-39769066 | None:intergenic | 25.0% |
| ! | AGTATCTGATAAATAAGCTT+CGG | - | chr7_1:39769423-39769442 | Msa1018920:intron | 25.0% |
| !!! | ATATCATTGACATTGACTTA+TGG | + | chr7_1:39769516-39769535 | None:intergenic | 25.0% |
| !! | AAGATTGAACAAAAGTACAA+AGG | + | chr7_1:39769586-39769605 | None:intergenic | 25.0% |
| !! | AAAAAAGCCACATCTTTTAT+GGG | - | chr7_1:39769656-39769675 | Msa1018920:intron | 25.0% |
| ! | GTGTAATTAGTGTTAGAATT+TGG | - | chr7_1:39769826-39769845 | Msa1018920:intron | 25.0% |
| !! | GATTTTGCAAATATTGAGTT+AGG | + | chr7_1:39769858-39769877 | None:intergenic | 25.0% |
| ! | AAAGTCAGTCCAATATTAAT+CGG | + | chr7_1:39770026-39770045 | None:intergenic | 25.0% |
| !!! | CTAATATTCAATTTGGCTTT+AGG | - | chr7_1:39770195-39770214 | Msa1018920:intron | 25.0% |
| !! | TTTAGGTTCATTTAATGGAA+GGG | - | chr7_1:39770212-39770231 | Msa1018920:intron | 25.0% |
| !!! | CATATTTTTTGTTTTACCTG+TGG | + | chr7_1:39770453-39770472 | None:intergenic | 25.0% |
| ! | CGAAAAAAAAAAGGAAAAAG+GGG | + | chr7_1:39770532-39770551 | None:intergenic | 25.0% |
| ! | GCGAAAAAAAAAAGGAAAAA+GGG | + | chr7_1:39770533-39770552 | None:intergenic | 25.0% |
| ! | AGCGAAAAAAAAAAGGAAAA+AGG | + | chr7_1:39770534-39770553 | None:intergenic | 25.0% |
| !! | GAGTTTTCATACAATAACAT+TGG | - | chr7_1:39770766-39770785 | Msa1018920:intron | 25.0% |
| !!! | TCATTGAAATTTTTCAGAGA+CGG | - | chr7_1:39771408-39771427 | Msa1018920:CDS | 25.0% |
| !!! | AATTTCCATTTTAACCATGT+AGG | - | chr7_1:39771813-39771832 | Msa1018920:intron | 25.0% |
| !!! | ATTTCCATTTTAACCATGTA+GGG | - | chr7_1:39771814-39771833 | Msa1018920:intron | 25.0% |
| ! | AATATAATCGATATGGATGA+CGG | + | chr7_1:39772027-39772046 | None:intergenic | 25.0% |
| !! | TAGTTTGTGTTTATAGTTAC+TGG | - | chr7_1:39772132-39772151 | Msa1018920:intron | 25.0% |
| ! | AGTTTGTGTTTATAGTTACT+GGG | - | chr7_1:39772133-39772152 | Msa1018920:intron | 25.0% |
| ! | CAAATAATACACACCTAAAT+TGG | + | chr7_1:39772180-39772199 | None:intergenic | 25.0% |
| !!! | GTTGGTTTTGTTGTTAAAAT+GGG | - | chr7_1:39772291-39772310 | Msa1018920:CDS | 25.0% |
| !! | TTGGTATTTGCTAATTTAAC+AGG | - | chr7_1:39772528-39772547 | Msa1018920:intron | 25.0% |
| ! | AGTGAAAAGGAAAATTGAAT+AGG | + | chr7_1:39772725-39772744 | None:intergenic | 25.0% |
| ! | ATTCTTAGAGAGCTATTATA+TGG | - | chr7_1:39772839-39772858 | Msa1018920:intron | 25.0% |
| !! | ATACTGAAGTTGTTATTGAA+TGG | - | chr7_1:39773411-39773430 | Msa1018920:intron | 25.0% |
| !!! | ATATACATATTGGCCATTTT+GGG | + | chr7_1:39773732-39773751 | None:intergenic | 25.0% |
| !! | AATATACATATTGGCCATTT+TGG | + | chr7_1:39773733-39773752 | None:intergenic | 25.0% |
| ! | AATATTAGGTCATTTGTTTG+AGG | - | chr7_1:39773865-39773884 | Msa1018920:intron | 25.0% |
| ! | CTAATATAAAGATATGAGTG+AGG | - | chr7_1:39773899-39773918 | Msa1018920:intron | 25.0% |
| !!! | TTGCAAGAATCTTTTAGTTA+AGG | - | chr7_1:39773947-39773966 | Msa1018920:intron | 25.0% |
| ! | GGAAGTAAAAAGTAAGTAAA+AGG | - | chr7_1:39773968-39773987 | Msa1018920:intron | 25.0% |
| ! | AATATGTATGAAATTTAGGG+TGG | - | chr7_1:39771367-39771386 | Msa1018920:CDS | 25.0% |
| !!! | TCAATGATATTTTTCAGAGA+CGG | - | chr7_1:39774075-39774094 | Msa1018920:intron | 25.0% |
| ! | GATAAATTGTTTATAGGCAA+TGG | + | chr7_1:39774113-39774132 | None:intergenic | 25.0% |
| !!! | ACATTTTTGGTCTAAAACTA+TGG | - | chr7_1:39774463-39774482 | Msa1018920:CDS | 25.0% |
| ! | GTTCAATCTTTTCAACATGT+TGG | + | chr7_1:39768187-39768206 | None:intergenic | 30.0% |
| CATGTTGAAAAGATTGAACT+TGG | - | chr7_1:39768188-39768207 | Msa1018920:intron | 30.0% | |
| AAGTTTGGTATCAACAACAA+AGG | - | chr7_1:39768223-39768242 | Msa1018920:intron | 30.0% | |
| TAGAAAAAGTTTAGACGAGT+TGG | - | chr7_1:39768637-39768656 | Msa1018920:intron | 30.0% | |
| ! | TTGCATGATGTCTTATTGAA+TGG | - | chr7_1:39768872-39768891 | Msa1018920:intron | 30.0% |
| ! | TGCATGATGTCTTATTGAAT+GGG | - | chr7_1:39768873-39768892 | Msa1018920:intron | 30.0% |
| TATATCCCTTCATTGATGTT+TGG | - | chr7_1:39768932-39768951 | Msa1018920:intron | 30.0% | |
| GATTTCCAAACATCAATGAA+GGG | + | chr7_1:39768940-39768959 | None:intergenic | 30.0% | |
| TGATTTCCAAACATCAATGA+AGG | + | chr7_1:39768941-39768960 | None:intergenic | 30.0% | |
| ! | AAAATATTGCGACACTTTTG+AGG | - | chr7_1:39769192-39769211 | Msa1018920:intron | 30.0% |
| ! | AAATATTGCGACACTTTTGA+GGG | - | chr7_1:39769193-39769212 | Msa1018920:intron | 30.0% |
| !! | TTATTTTACGCCAAGTCAAA+AGG | + | chr7_1:39769232-39769251 | None:intergenic | 30.0% |
| TTGTTGCAGGTAAAGAAAAA+TGG | - | chr7_1:39769362-39769381 | Msa1018920:intron | 30.0% | |
| GTATCTGATAAATAAGCTTC+GGG | - | chr7_1:39769424-39769443 | Msa1018920:intron | 30.0% | |
| AAATCAACTCAGAAAAGATG+TGG | + | chr7_1:39769631-39769650 | None:intergenic | 30.0% | |
| !!! | CATAAAAGATGTGGCTTTTT+TGG | + | chr7_1:39769657-39769676 | None:intergenic | 30.0% |
| ! | CAAAAAAGCCACATCTTTTA+TGG | - | chr7_1:39769655-39769674 | Msa1018920:intron | 30.0% |
| ATTCATTCCCATAAAAGATG+TGG | + | chr7_1:39769666-39769685 | None:intergenic | 30.0% | |
| ! | TCTCCATTACTAGATTTTTG+CGG | + | chr7_1:39769778-39769797 | None:intergenic | 30.0% |
| ! | CAAAAATCTAGTAATGGAGA+AGG | - | chr7_1:39769778-39769797 | Msa1018920:intron | 30.0% |
| !!! | GGAGAAGGTTTTAATTTTCA+TGG | - | chr7_1:39769793-39769812 | Msa1018920:intron | 30.0% |
| AAAGATGGACCGATTAATAT+TGG | - | chr7_1:39770014-39770033 | Msa1018920:intron | 30.0% | |
| !! | CTTTACAAGCTGATTTTGTA+AGG | + | chr7_1:39770053-39770072 | None:intergenic | 30.0% |
| CTTACAAAATCAGCTTGTAA+AGG | - | chr7_1:39770051-39770070 | Msa1018920:CDS | 30.0% | |
| !! | TTGGCTTTAGGTTCATTTAA+TGG | - | chr7_1:39770207-39770226 | Msa1018920:intron | 30.0% |
| ! | CTTTAGGTTCATTTAATGGA+AGG | - | chr7_1:39770211-39770230 | Msa1018920:intron | 30.0% |
| !! | GATTTGTTGATAACATACCT+TGG | + | chr7_1:39770265-39770284 | None:intergenic | 30.0% |
| ! | TTCTTTAAGTTTGGTATGCA+AGG | - | chr7_1:39770358-39770377 | Msa1018920:intron | 30.0% |
| TTTCATACAATAACATTGGC+AGG | - | chr7_1:39770770-39770789 | Msa1018920:intron | 30.0% | |
| ! | GAAACTTTGTTTCCACATTT+AGG | + | chr7_1:39771011-39771030 | None:intergenic | 30.0% |
| GAAGATATAATCATTTCCGT+TGG | + | chr7_1:39771267-39771286 | None:intergenic | 30.0% | |
| GATAAATTGCTTATAGGCAA+TGG | + | chr7_1:39771446-39771465 | None:intergenic | 30.0% | |
| GTTTCAAGATTTATCAACCA+TGG | - | chr7_1:39771533-39771552 | Msa1018920:intron | 30.0% | |
| AGGTATTCCTCTTTGTAATA+AGG | - | chr7_1:39771657-39771676 | Msa1018920:CDS | 30.0% | |
| TTTACCCTACATGGTTAAAA+TGG | + | chr7_1:39771821-39771840 | None:intergenic | 30.0% | |
| TGGATCTAACAACTTTATGT+TGG | + | chr7_1:39771890-39771909 | None:intergenic | 30.0% | |
| ! | TTCTAACACTTGCTTTGTTA+CGG | + | chr7_1:39771925-39771944 | None:intergenic | 30.0% |
| AATAACAGTATTAAGACGGT+AGG | - | chr7_1:39772264-39772283 | Msa1018920:CDS | 30.0% | |
| !!! | GGTTGGTTTTGTTGTTAAAA+TGG | - | chr7_1:39772290-39772309 | Msa1018920:CDS | 30.0% |
| AGGACTCTTGAGATATAAAA+TGG | - | chr7_1:39772337-39772356 | Msa1018920:intron | 30.0% | |
| GGACTCTTGAGATATAAAAT+GGG | - | chr7_1:39772338-39772357 | Msa1018920:intron | 30.0% | |
| ACCATGAAGTAAGTCAATAA+GGG | + | chr7_1:39772491-39772510 | None:intergenic | 30.0% | |
| TACCATGAAGTAAGTCAATA+AGG | + | chr7_1:39772492-39772511 | None:intergenic | 30.0% | |
| ! | TTTCCTTTTCACTTTCCATT+AGG | - | chr7_1:39772732-39772751 | Msa1018920:intron | 30.0% |
| ! | ATTTTTGCGCAATATGTATC+AGG | + | chr7_1:39772775-39772794 | None:intergenic | 30.0% |
| GTGACAAAAACAATGTCATT+TGG | - | chr7_1:39772804-39772823 | Msa1018920:intron | 30.0% | |
| ! | AGCTCTCTAAGAATTATCAT+AGG | + | chr7_1:39772833-39772852 | None:intergenic | 30.0% |
| ACACGAAATTCAATAACACT+TGG | - | chr7_1:39773032-39773051 | Msa1018920:intron | 30.0% | |
| TTTGAAGAACGGTTTAAACA+TGG | - | chr7_1:39773160-39773179 | Msa1018920:intron | 30.0% | |
| ! | CTCAACACAACGAATTTTAT+CGG | - | chr7_1:39773256-39773275 | Msa1018920:CDS | 30.0% |
| !!! | ATGGTTTTTTTTATGGTGTC+CGG | - | chr7_1:39773465-39773484 | Msa1018920:CDS | 30.0% |
| ACTATATAGCTCAATTGGTA+AGG | + | chr7_1:39773528-39773547 | None:intergenic | 30.0% | |
| TAAGCACTATATAGCTCAAT+TGG | + | chr7_1:39773533-39773552 | None:intergenic | 30.0% | |
| !! | TATACATATTGGCCATTTTG+GGG | + | chr7_1:39773731-39773750 | None:intergenic | 30.0% |
| TGAAAAAAGGGACAAGTTAA+TGG | - | chr7_1:39774133-39774152 | Msa1018920:intron | 30.0% | |
| GTTTCAAGATTTATCAACCA+TGG | - | chr7_1:39771533-39771552 | Msa1018920:intron | 30.0% | |
| AATATCCGTATTACCTGATA+GGG | + | chr7_1:39774320-39774339 | None:intergenic | 30.0% | |
| TAATATCCGTATTACCTGAT+AGG | + | chr7_1:39774321-39774340 | None:intergenic | 30.0% | |
| ! | ACTCTACACTACAACATTTT+TGG | - | chr7_1:39774450-39774469 | Msa1018920:CDS | 30.0% |
| !! | AACAACGGTTTTATCAACTA+TGG | + | chr7_1:39774502-39774521 | None:intergenic | 30.0% |
| !! | AAAACCGTTGTTTTACCTTT+CGG | - | chr7_1:39774510-39774529 | Msa1018920:CDS | 30.0% |
| ! | CTCATTTTCAGAACTCTTAG+TGG | + | chr7_1:39768069-39768088 | None:intergenic | 35.0% |
| !! | CACTAAGAGTTCTGAAAATG+AGG | - | chr7_1:39768067-39768086 | Msa1018920:CDS | 35.0% |
| ! | TTCTGAAAATGAGGCTATGA+TGG | - | chr7_1:39768076-39768095 | Msa1018920:CDS | 35.0% |
| GATTGAACTTGGAAGTAAAG+AGG | - | chr7_1:39768199-39768218 | Msa1018920:intron | 35.0% | |
| TGGAAGTAAAGAGGAAAGTT+TGG | - | chr7_1:39768208-39768227 | Msa1018920:intron | 35.0% | |
| GTTTGCTCACAACTTCAAAA+TGG | - | chr7_1:39768245-39768264 | Msa1018920:intron | 35.0% | |
| GATGATATTTCCCATAAGAG+AGG | - | chr7_1:39768281-39768300 | Msa1018920:intron | 35.0% | |
| TATTTCCCATAAGAGAGGTA+TGG | - | chr7_1:39768286-39768305 | Msa1018920:intron | 35.0% | |
| ! | TGTCATTCAAGTTCAAGAAG+TGG | - | chr7_1:39768374-39768393 | Msa1018920:CDS | 35.0% |
| !! | TCTTTGATGGACTTGACTTT+AGG | - | chr7_1:39768423-39768442 | Msa1018920:CDS | 35.0% |
| !! | CTTTGATGGACTTGACTTTA+GGG | - | chr7_1:39768424-39768443 | Msa1018920:CDS | 35.0% |
| !! | TTTGATGGACTTGACTTTAG+GGG | - | chr7_1:39768425-39768444 | Msa1018920:CDS | 35.0% |
| AGAATGTGTGACAATTTCCA+TGG | + | chr7_1:39768680-39768699 | None:intergenic | 35.0% | |
| AAGATAGTATCATGAGGCTA+GGG | + | chr7_1:39769321-39769340 | None:intergenic | 35.0% | |
| TAAGATAGTATCATGAGGCT+AGG | + | chr7_1:39769322-39769341 | None:intergenic | 35.0% | |
| ! | GCTAACTTTCATTTTGTTGC+AGG | - | chr7_1:39769349-39769368 | Msa1018920:intron | 35.0% |
| !! | ATTGATAACGAATACGTTCC+TGG | - | chr7_1:39769386-39769405 | Msa1018920:intron | 35.0% |
| TGCTAAAGTGGGAACATATA+AGG | - | chr7_1:39769451-39769470 | Msa1018920:intron | 35.0% | |
| TCACCGCAAAAATCTAGTAA+TGG | - | chr7_1:39769772-39769791 | Msa1018920:intron | 35.0% | |
| TTGAAGGATAAGACCTCATA+TGG | + | chr7_1:39769919-39769938 | None:intergenic | 35.0% | |
| GGTTAAGAATCTCAGATTGA+AGG | + | chr7_1:39769935-39769954 | None:intergenic | 35.0% | |
| ACACTTTAAATGTCCAGACA+TGG | + | chr7_1:39769971-39769990 | None:intergenic | 35.0% | |
| ! | TTTTATCAGGTTTCGGCTAT+CGG | + | chr7_1:39769997-39770016 | None:intergenic | 35.0% |
| ! | GTCCATCTTTTATCAGGTTT+CGG | + | chr7_1:39770004-39770023 | None:intergenic | 35.0% |
| ! | TAATCGGTCCATCTTTTATC+AGG | + | chr7_1:39770010-39770029 | None:intergenic | 35.0% |
| ! | AAGAGATAAAGCCTTGTCAT+GGG | + | chr7_1:39770100-39770119 | None:intergenic | 35.0% |
| AAACTCTTTCTTCTTCTCCA+AGG | - | chr7_1:39770245-39770264 | Msa1018920:intron | 35.0% | |
| TGGAGGATCATCAAAATCAT+TGG | + | chr7_1:39770423-39770442 | None:intergenic | 35.0% | |
| ! | AAGGAAAAAGGGGCATATAT+TGG | + | chr7_1:39770522-39770541 | None:intergenic | 35.0% |
| AGCATGCAGCGAAAAAAAAA+AGG | + | chr7_1:39770541-39770560 | None:intergenic | 35.0% | |
| !! | TTTTCGCTGCATGCTTTATT+TGG | - | chr7_1:39770546-39770565 | Msa1018920:intron | 35.0% |
| !! | GGCAGGTATTGTTTTACTTT+TGG | - | chr7_1:39770787-39770806 | Msa1018920:intron | 35.0% |
| TGGAAACAAAGTTTCTCAAC+AGG | - | chr7_1:39771016-39771035 | Msa1018920:intron | 35.0% | |
| GGAAACAAAGTTTCTCAACA+GGG | - | chr7_1:39771017-39771036 | Msa1018920:intron | 35.0% | |
| ATTGTAGAATGACCTCAAGT+CGG | + | chr7_1:39771052-39771071 | None:intergenic | 35.0% | |
| AAACTACCTTTCTCTTACAC+AGG | - | chr7_1:39771127-39771146 | Msa1018920:CDS | 35.0% | |
| GATAAACCTGTGTAAGAGAA+AGG | + | chr7_1:39771136-39771155 | None:intergenic | 35.0% | |
| GATTGTTTGCACACAATCAA+TGG | - | chr7_1:39771293-39771312 | Msa1018920:intron | 35.0% | |
| !! | TGAAATTTTTCAGAGACGGT+TGG | - | chr7_1:39771412-39771431 | Msa1018920:CDS | 35.0% |
| !! | GAAATTTTTCAGAGACGGTT+GGG | - | chr7_1:39771413-39771432 | Msa1018920:CDS | 35.0% |
| TGAAAAAAGGGACGAGTTAA+TGG | - | chr7_1:39771466-39771485 | Msa1018920:CDS | 35.0% | |
| ACACATTGTACAAAGAGGTT+TGG | + | chr7_1:39771566-39771585 | None:intergenic | 35.0% | |
| TGAGAACACATTGTACAAAG+AGG | + | chr7_1:39771571-39771590 | None:intergenic | 35.0% | |
| ACAAAGAGGAATACCTGATA+GGG | + | chr7_1:39771653-39771672 | None:intergenic | 35.0% | |
| TACAAAGAGGAATACCTGAT+AGG | + | chr7_1:39771654-39771673 | None:intergenic | 35.0% | |
| CAATAACACACCATCATGTT+TGG | + | chr7_1:39771745-39771764 | None:intergenic | 35.0% | |
| ! | CAAACATGATGGTGTGTTAT+TGG | - | chr7_1:39771743-39771762 | Msa1018920:intron | 35.0% |
| !!! | GATGGTGTGTTATTGGTTTT+AGG | - | chr7_1:39771750-39771769 | Msa1018920:intron | 35.0% |
| AAATGGAAATTTAAAGGGGG+AGG | + | chr7_1:39771804-39771823 | None:intergenic | 35.0% | |
| ATGTTGGACGCATTTCAAAA+AGG | + | chr7_1:39771874-39771893 | None:intergenic | 35.0% | |
| ! | TCTAACACTTGCTTTGTTAC+GGG | + | chr7_1:39771924-39771943 | None:intergenic | 35.0% |
| TGAAATAGACCTTGTATCGA+CGG | - | chr7_1:39771995-39772014 | Msa1018920:CDS | 35.0% | |
| ATGAAGTAAGTCAATAAGGG+AGG | + | chr7_1:39772488-39772507 | None:intergenic | 35.0% | |
| !! | TCCCTTATTGACTTACTTCA+TGG | - | chr7_1:39772487-39772506 | Msa1018920:intron | 35.0% |
| AAACAGCTTCAATGTCATTG+TGG | - | chr7_1:39772610-39772629 | Msa1018920:intron | 35.0% | |
| AATTGAATAGGCTCACACAT+TGG | + | chr7_1:39772713-39772732 | None:intergenic | 35.0% | |
| !! | TTGGTTCGAGAGTTTTTGAA+GGG | - | chr7_1:39773051-39773070 | Msa1018920:intron | 35.0% |
| ! | ACACAACGAATTTTATCGGA+AGG | - | chr7_1:39773260-39773279 | Msa1018920:CDS | 35.0% |
| ! | GTACCTTTTCCATTTCATCA+GGG | + | chr7_1:39773369-39773388 | None:intergenic | 35.0% |
| ! | AGTACCTTTTCCATTTCATC+AGG | + | chr7_1:39773370-39773389 | None:intergenic | 35.0% |
| !!! | TGGTTTTTTTTATGGTGTCC+GGG | - | chr7_1:39773466-39773485 | Msa1018920:CDS | 35.0% |
| !! | TGATATTTTTCAGAGACGGT+TGG | - | chr7_1:39774079-39774098 | Msa1018920:intron | 35.0% |
| !! | GATATTTTTCAGAGACGGTT+GGG | - | chr7_1:39774080-39774099 | Msa1018920:intron | 35.0% |
| ACACATTGTACAAAGAGGTT+TGG | + | chr7_1:39771566-39771585 | None:intergenic | 35.0% | |
| TGAGAACACATTGTACAAAG+AGG | + | chr7_1:39771571-39771590 | None:intergenic | 35.0% | |
| ATTGCCGAAAGGTAAAACAA+CGG | + | chr7_1:39774517-39774536 | None:intergenic | 35.0% | |
| ! | GTTGTCGTTTCATTTGACAA+CGG | - | chr7_1:39774564-39774583 | Msa1018920:CDS | 35.0% |
| AGTCTTGAACTCACTCTTGT+TGG | + | chr7_1:39768104-39768123 | None:intergenic | 40.0% | |
| ACTGACCATACCTCTCTTAT+GGG | + | chr7_1:39768294-39768313 | None:intergenic | 40.0% | |
| AACTGACCATACCTCTCTTA+TGG | + | chr7_1:39768295-39768314 | None:intergenic | 40.0% | |
| TCTTCTCAAAGAGTTGAGCT+TGG | + | chr7_1:39768345-39768364 | None:intergenic | 40.0% | |
| AGTCCATCAAAGACGAACAT+TGG | + | chr7_1:39768416-39768435 | None:intergenic | 40.0% | |
| TGTCCTTGAGAGAAACATCT+AGG | - | chr7_1:39768453-39768472 | Msa1018920:CDS | 40.0% | |
| AAGCCTAGATGTTTCTCTCA+AGG | + | chr7_1:39768459-39768478 | None:intergenic | 40.0% | |
| TTGTATCACACACCTTAGCA+AGG | + | chr7_1:39768496-39768515 | None:intergenic | 40.0% | |
| !! | CGAGTTGGATTTCAGACTTT+TGG | - | chr7_1:39768652-39768671 | Msa1018920:intron | 40.0% |
| !!! | ATTTCAGACTTTTGGAGCCA+TGG | - | chr7_1:39768660-39768679 | Msa1018920:intron | 40.0% |
| GTAACAACTTCATTTGCAGC+AGG | - | chr7_1:39769130-39769149 | Msa1018920:intron | 40.0% | |
| AGCAAGAATCGACACAAGAT+AGG | - | chr7_1:39769167-39769186 | Msa1018920:intron | 40.0% | |
| GCAAGAATCGACACAAGATA+GGG | - | chr7_1:39769168-39769187 | Msa1018920:intron | 40.0% | |
| TACTTCGAAGTAGTGATTCC+AGG | + | chr7_1:39769407-39769426 | None:intergenic | 40.0% | |
| ! | CATGATAGTGCGATGTTACA+TGG | - | chr7_1:39769727-39769746 | Msa1018920:intron | 40.0% |
| CTCACTTGTATAGCCATATG+AGG | - | chr7_1:39769903-39769922 | Msa1018920:intron | 40.0% | |
| TTTATCAGGTTTCGGCTATC+GGG | + | chr7_1:39769996-39770015 | None:intergenic | 40.0% | |
| AGCCGAAACCTGATAAAAGA+TGG | - | chr7_1:39769999-39770018 | Msa1018920:intron | 40.0% | |
| AAAATCAGCTTGTAAAGGCG+AGG | - | chr7_1:39770056-39770075 | Msa1018920:CDS | 40.0% | |
| TGTCATGGGTTTATAGGTGA+GGG | + | chr7_1:39770086-39770105 | None:intergenic | 40.0% | |
| TTGTCATGGGTTTATAGGTG+AGG | + | chr7_1:39770087-39770106 | None:intergenic | 40.0% | |
| TCACCTATAAACCCATGACA+AGG | - | chr7_1:39770086-39770105 | Msa1018920:CDS | 40.0% | |
| ! | AAGCCTTGTCATGGGTTTAT+AGG | + | chr7_1:39770092-39770111 | None:intergenic | 40.0% |
| ! | GAAGAGATAAAGCCTTGTCA+TGG | + | chr7_1:39770101-39770120 | None:intergenic | 40.0% |
| GTATGCAAGGACATTAGCAA+TGG | - | chr7_1:39770371-39770390 | Msa1018920:intron | 40.0% | |
| CTAGATGGAACTTCAATGCT+TGG | + | chr7_1:39770676-39770695 | None:intergenic | 40.0% | |
| TGTCCTTGTGCTAGTCATAA+TGG | - | chr7_1:39770739-39770758 | Msa1018920:intron | 40.0% | |
| GTTTATCGTACTCCCAAGAA+AGG | - | chr7_1:39771149-39771168 | Msa1018920:CDS | 40.0% | |
| ACACCAATATACTCGACAAC+TGG | + | chr7_1:39771215-39771234 | None:intergenic | 40.0% | |
| CACACAATCAATGGTGTAGA+TGG | - | chr7_1:39771302-39771321 | Msa1018920:intron | 40.0% | |
| CCAGCATCTATGCAATATTC+AGG | + | chr7_1:39771500-39771519 | None:intergenic | 40.0% | |
| CCTGAATATTGCATAGATGC+TGG | - | chr7_1:39771497-39771516 | Msa1018920:CDS | 40.0% | |
| !!! | TGCATAGATGCTGGTTCTTT+TGG | - | chr7_1:39771506-39771525 | Msa1018920:CDS | 40.0% |
| !!! | CTCACTGTTTTTACCCTACA+TGG | + | chr7_1:39771830-39771849 | None:intergenic | 40.0% |
| ! | TAACACTTGCTTTGTTACGG+GGG | + | chr7_1:39771922-39771941 | None:intergenic | 40.0% |
| ! | CTAACACTTGCTTTGTTACG+GGG | + | chr7_1:39771923-39771942 | None:intergenic | 40.0% |
| !! | TCCTTAAGGGTGGTTGTTTT+TGG | - | chr7_1:39772072-39772091 | Msa1018920:intron | 40.0% |
| !!! | CCTTAAGGGTGGTTGTTTTT+GGG | - | chr7_1:39772073-39772092 | Msa1018920:intron | 40.0% |
| ! | AATTGGGCACCGTATAAAGA+CGG | + | chr7_1:39772163-39772182 | None:intergenic | 40.0% |
| CTTTATACGGTGCCCAATTT+AGG | - | chr7_1:39772164-39772183 | Msa1018920:intron | 40.0% | |
| !!! | TTGTTACCATCGCTAGCTTT+TGG | - | chr7_1:39772197-39772216 | Msa1018920:intron | 40.0% |
| CAGTATTAAGACGGTAGGTA+TGG | - | chr7_1:39772269-39772288 | Msa1018920:CDS | 40.0% | |
| ATTAAGACGGTAGGTATGGT+TGG | - | chr7_1:39772273-39772292 | Msa1018920:CDS | 40.0% | |
| TTCCATGTCATCTTCTGAAC+TGG | - | chr7_1:39772413-39772432 | Msa1018920:CDS | 40.0% | |
| AACCAGTTCAGAAGATGACA+TGG | + | chr7_1:39772418-39772437 | None:intergenic | 40.0% | |
| GAGTGTGTAACCATAGTCAT+AGG | + | chr7_1:39772560-39772579 | None:intergenic | 40.0% | |
| GATAGTGTGTCTGATTCTGA+TGG | - | chr7_1:39772580-39772599 | Msa1018920:intron | 40.0% | |
| TCAATGTCATTGTGGTGCAA+AGG | - | chr7_1:39772618-39772637 | Msa1018920:intron | 40.0% | |
| GTGCCTAATGGAAAGTGAAA+AGG | + | chr7_1:39772738-39772757 | None:intergenic | 40.0% | |
| TCACTTTCCATTAGGCACTT+AGG | - | chr7_1:39772740-39772759 | Msa1018920:intron | 40.0% | |
| CACTTTCCATTAGGCACTTA+GGG | - | chr7_1:39772741-39772760 | Msa1018920:intron | 40.0% | |
| ACTTTCCATTAGGCACTTAG+GGG | - | chr7_1:39772742-39772761 | Msa1018920:intron | 40.0% | |
| ACAGGGTTGTCTTGACAATT+CGG | - | chr7_1:39772964-39772983 | Msa1018920:intron | 40.0% | |
| !! | CTTGGTTCGAGAGTTTTTGA+AGG | - | chr7_1:39773050-39773069 | Msa1018920:intron | 40.0% |
| !! | TTCGAGAGTTTTTGAAGGGA+GGG | - | chr7_1:39773055-39773074 | Msa1018920:intron | 40.0% |
| !! | TAAATTAGAGGCACTGCGAA+GGG | - | chr7_1:39773318-39773337 | Msa1018920:intron | 40.0% |
| GTACCCTGATGAAATGGAAA+AGG | - | chr7_1:39773363-39773382 | Msa1018920:intron | 40.0% | |
| !!! | GGTTTTTTTTATGGTGTCCG+GGG | - | chr7_1:39773467-39773486 | Msa1018920:CDS | 40.0% |
| AAAATTCAAGGTTCGAACCC+CGG | + | chr7_1:39773487-39773506 | None:intergenic | 40.0% | |
| !!! | ATTGGCCATTTTGGGGTTAT+GGG | + | chr7_1:39773724-39773743 | None:intergenic | 40.0% |
| !!! | TATTGGCCATTTTGGGGTTA+TGG | + | chr7_1:39773725-39773744 | None:intergenic | 40.0% |
| CCAGCATCTATGCAATATTC+AGG | + | chr7_1:39771500-39771519 | None:intergenic | 40.0% | |
| CCTGAATATTGCATAGATGC+TGG | - | chr7_1:39771497-39771516 | Msa1018920:CDS | 40.0% | |
| !!! | TGCATAGATGCTGGTTCTTT+TGG | - | chr7_1:39771506-39771525 | Msa1018920:CDS | 40.0% |
| TACCTCCCTATCAGGTAATA+CGG | - | chr7_1:39774312-39774331 | Msa1018920:CDS | 40.0% | |
| !! | GAAAGAAAAGCATTGCCGAA+AGG | + | chr7_1:39774528-39774547 | None:intergenic | 40.0% |
| TTTCTTTCCGTGGTAGTCTA+AGG | - | chr7_1:39774540-39774559 | Msa1018920:CDS | 40.0% | |
| !! | ACAACGGATTTGTTGCATAC+AGG | - | chr7_1:39774580-39774599 | Msa1018920:CDS | 40.0% |
| CTTGAACTTGAATGACAGCG+AGG | + | chr7_1:39768371-39768390 | None:intergenic | 45.0% | |
| CGTCCAATGTTCGTCTTTGA+TGG | - | chr7_1:39768410-39768429 | Msa1018920:CDS | 45.0% | |
| CTTAGCAAGGAGACGAAGAT+TGG | + | chr7_1:39768483-39768502 | None:intergenic | 45.0% | |
| CAATCTTCGTCTCCTTGCTA+AGG | - | chr7_1:39768481-39768500 | Msa1018920:CDS | 45.0% | |
| !! | GCAATGTGAGCCTTTTGACT+TGG | - | chr7_1:39769219-39769238 | Msa1018920:intron | 45.0% |
| !! | CTTCGGGAACTTGCTAAAGT+GGG | - | chr7_1:39769440-39769459 | Msa1018920:intron | 45.0% |
| TGAAGTTCCATCTAGTGCTG+CGG | - | chr7_1:39770681-39770700 | Msa1018920:intron | 45.0% | |
| ACTAGCACAAGGACATCTCT+TGG | + | chr7_1:39770734-39770753 | None:intergenic | 45.0% | |
| GAGCCATTATGACTAGCACA+AGG | + | chr7_1:39770745-39770764 | None:intergenic | 45.0% | |
| ATCGTACTCCCAAGAAAGGT+TGG | - | chr7_1:39771153-39771172 | Msa1018920:CDS | 45.0% | |
| TCGTACTCCCAAGAAAGGTT+GGG | - | chr7_1:39771154-39771173 | Msa1018920:CDS | 45.0% | |
| ACATGGGACTTTATCCCATC+AGG | - | chr7_1:39771185-39771204 | Msa1018920:CDS | 45.0% | |
| GCACCAGTTGTCGAGTATAT+TGG | - | chr7_1:39771209-39771228 | Msa1018920:CDS | 45.0% | |
| CTAAGTAGAGACGATGAGCT+AGG | - | chr7_1:39771236-39771255 | Msa1018920:intron | 45.0% | |
| CAATGGTGTAGATGGAAGAG+AGG | - | chr7_1:39771310-39771329 | Msa1018920:intron | 45.0% | |
| ! | AGAGGTTTGGTTCACATCCA+TGG | + | chr7_1:39771553-39771572 | None:intergenic | 45.0% |
| AGAAGACATACCTCCCTATC+AGG | - | chr7_1:39771637-39771656 | Msa1018920:CDS | 45.0% | |
| AAGAGGAATACCTGATAGGG+AGG | + | chr7_1:39771650-39771669 | None:intergenic | 45.0% | |
| TGTTACGGGGGAAATACATC+TGG | + | chr7_1:39771910-39771929 | None:intergenic | 45.0% | |
| ACGGTGTTTCGGTTCCTTAA+GGG | - | chr7_1:39772059-39772078 | Msa1018920:intron | 45.0% | |
| CCCAAAAACAACCACCCTTA+AGG | + | chr7_1:39772076-39772095 | None:intergenic | 45.0% | |
| !!! | AAGGGTGGTTGTTTTTGGGT+TGG | - | chr7_1:39772077-39772096 | Msa1018920:intron | 45.0% |
| !!! | GGTTGTTTTTGGGTTGGCTT+CGG | - | chr7_1:39772083-39772102 | Msa1018920:intron | 45.0% |
| CTGGGTGTTCCGTCTTTATA+CGG | - | chr7_1:39772151-39772170 | Msa1018920:intron | 45.0% | |
| CAGGAACTCACCTATGACTA+TGG | - | chr7_1:39772547-39772566 | Msa1018920:intron | 45.0% | |
| AAGCGCTTGTACTAGTGCAA+TGG | - | chr7_1:39772649-39772668 | Msa1018920:intron | 45.0% | |
| CTTTCCATTAGGCACTTAGG+GGG | - | chr7_1:39772743-39772762 | Msa1018920:intron | 45.0% | |
| !! | GTTCGAGAGTTTTTGAAGGG+AGG | - | chr7_1:39773054-39773073 | Msa1018920:intron | 45.0% |
| !! | AGAGTTTTTGAAGGGAGGGA+GGG | - | chr7_1:39773059-39773078 | Msa1018920:intron | 45.0% |
| GCAGTGCCTCTAATTTAGAG+GGG | + | chr7_1:39773315-39773334 | None:intergenic | 45.0% | |
| CGCAGTGCCTCTAATTTAGA+GGG | + | chr7_1:39773316-39773335 | None:intergenic | 45.0% | |
| TCGCAGTGCCTCTAATTTAG+AGG | + | chr7_1:39773317-39773336 | None:intergenic | 45.0% | |
| !! | CTAAATTAGAGGCACTGCGA+AGG | - | chr7_1:39773317-39773336 | Msa1018920:intron | 45.0% |
| TTTCATCAGGGTACACCTTG+TGG | + | chr7_1:39773357-39773376 | None:intergenic | 45.0% | |
| CAAGGTGTACCCTGATGAAA+TGG | - | chr7_1:39773357-39773376 | Msa1018920:intron | 45.0% | |
| CTCTTCCCATAACCCCAAAA+TGG | - | chr7_1:39773716-39773735 | Msa1018920:intron | 45.0% | |
| ! | AGAGGTTTGGTTCACATCCA+TGG | + | chr7_1:39771553-39771572 | None:intergenic | 45.0% |
| ATGTGACATACCTCCCTATC+AGG | - | chr7_1:39774304-39774323 | Msa1018920:CDS | 45.0% | |
| ATCCGTATTACCTGATAGGG+AGG | + | chr7_1:39774317-39774336 | None:intergenic | 45.0% | |
| !!! | ATAAAATTGTTTTTATATTT+TGG | - | chr7_1:39773587-39773606 | Msa1018920:intron | 5.0% |
| !! | GCTTCGGGAACTTGCTAAAG+TGG | - | chr7_1:39769439-39769458 | Msa1018920:intron | 50.0% |
| ! | GTTTTACCTGTGGGTGCAAC+TGG | + | chr7_1:39770443-39770462 | None:intergenic | 50.0% |
| GAAGTTCCATCTAGTGCTGC+GGG | - | chr7_1:39770682-39770701 | Msa1018920:intron | 50.0% | |
| CATTCGACCACGATGTCTAG+AGG | + | chr7_1:39770966-39770985 | None:intergenic | 50.0% | |
| CTAGACATCGTGGTCGAATG+TGG | - | chr7_1:39770966-39770985 | Msa1018920:intron | 50.0% | |
| TTAGGTCCGCATCCACATTG+CGG | + | chr7_1:39770993-39771012 | None:intergenic | 50.0% | |
| TGTGGATGCGGACCTAAATG+TGG | - | chr7_1:39770996-39771015 | Msa1018920:intron | 50.0% | |
| !! | GGGCTTAACTTACCGACTTG+AGG | - | chr7_1:39771037-39771056 | Msa1018920:CDS | 50.0% |
| TACTCCCAAGAAAGGTTGGG+CGG | - | chr7_1:39771157-39771176 | Msa1018920:CDS | 50.0% | |
| CTTACCGCCCAACCTTTCTT+GGG | + | chr7_1:39771164-39771183 | None:intergenic | 50.0% | |
| TCTTACCGCCCAACCTTTCT+TGG | + | chr7_1:39771165-39771184 | None:intergenic | 50.0% | |
| AAGGTTGGGCGGTAAGAACA+TGG | - | chr7_1:39771168-39771187 | Msa1018920:CDS | 50.0% | |
| AGGTTGGGCGGTAAGAACAT+GGG | - | chr7_1:39771169-39771188 | Msa1018920:CDS | 50.0% | |
| !! | GATGAGCTAGGAAGTGCCAA+CGG | - | chr7_1:39771248-39771267 | Msa1018920:intron | 50.0% |
| ! | GAGCTAGTCTAGGATCTCTG+TGG | + | chr7_1:39771598-39771617 | None:intergenic | 50.0% |
| ! | AGCACTACACGAGCTAGTCT+AGG | + | chr7_1:39771608-39771627 | None:intergenic | 50.0% |
| ! | CGGTAAGTACCGTCGATACA+AGG | + | chr7_1:39772007-39772026 | None:intergenic | 50.0% |
| GTGTTTCGGTTCCTTAAGGG+TGG | - | chr7_1:39772062-39772081 | Msa1018920:intron | 50.0% | |
| AGAACCCCCTAAGTGCCTAA+TGG | + | chr7_1:39772750-39772769 | None:intergenic | 50.0% | |
| GGGTTGTCTTGACAATTCGG+AGG | - | chr7_1:39772967-39772986 | Msa1018920:intron | 50.0% | |
| !! | GAGAGTTTTTGAAGGGAGGG+AGG | - | chr7_1:39773058-39773077 | Msa1018920:intron | 50.0% |
| !! | GAGTTTTTGAAGGGAGGGAG+GGG | - | chr7_1:39773060-39773079 | Msa1018920:intron | 50.0% |
| GTGAGGCCCCTCTAAATTAG+AGG | - | chr7_1:39773306-39773325 | Msa1018920:intron | 50.0% | |
| GGTCTTGATGCACTTCCACA+AGG | - | chr7_1:39773339-39773358 | Msa1018920:intron | 50.0% | |
| ! | GAGCTAGTCTAGGATCTCTG+TGG | + | chr7_1:39771598-39771617 | None:intergenic | 50.0% |
| ! | AGATCCTAGACTAGCTCGTG+TGG | - | chr7_1:39771601-39771620 | Msa1018920:intron | 50.0% |
| ! | CGGCAATGCTTTTCTTTCCG+TGG | - | chr7_1:39774530-39774549 | Msa1018920:CDS | 50.0% |
| GACAACGCCTTAGACTACCA+CGG | + | chr7_1:39774550-39774569 | None:intergenic | 50.0% | |
| AGACATGGACGTGAGAGGGT+GGG | + | chr7_1:39769956-39769975 | None:intergenic | 55.0% | |
| GTCCAGACATGGACGTGAGA+GGG | + | chr7_1:39769960-39769979 | None:intergenic | 55.0% | |
| TGTCCAGACATGGACGTGAG+AGG | + | chr7_1:39769961-39769980 | None:intergenic | 55.0% | |
| TTACCTGTGGGTGCAACTGG+AGG | + | chr7_1:39770440-39770459 | None:intergenic | 55.0% | |
| TTGCATCCCGCAGCACTAGA+TGG | + | chr7_1:39770691-39770710 | None:intergenic | 55.0% | |
| TGCTGCGGGATGCAATTGCA+AGG | - | chr7_1:39770696-39770715 | Msa1018920:intron | 55.0% | |
| GCTGCGGGATGCAATTGCAA+GGG | - | chr7_1:39770697-39770716 | Msa1018920:intron | 55.0% | |
| GATCGAGCCTCTAGACATCG+TGG | - | chr7_1:39770956-39770975 | Msa1018920:intron | 55.0% | |
| GTCGAATGTGGACCGCAATG+TGG | - | chr7_1:39770978-39770997 | Msa1018920:intron | 55.0% | |
| TGTGGACCGCAATGTGGATG+CGG | - | chr7_1:39770984-39771003 | Msa1018920:intron | 55.0% | |
| CGACAACTGGTGCACCTGAT+GGG | + | chr7_1:39771202-39771221 | None:intergenic | 55.0% | |
| TCGACAACTGGTGCACCTGA+TGG | + | chr7_1:39771203-39771222 | None:intergenic | 55.0% | |
| GACGAGCCAAAAGCTAGCGA+TGG | + | chr7_1:39772206-39772225 | None:intergenic | 55.0% | |
| !!! | GCTTTTGGCTCGTCTTGTGC+CGG | - | chr7_1:39772212-39772231 | Msa1018920:intron | 55.0% |
| !! | TTTTTGAAGGGAGGGAGGGG+AGG | - | chr7_1:39773063-39773082 | Msa1018920:intron | 55.0% |
| !! | TTTTGAAGGGAGGGAGGGGA+GGG | - | chr7_1:39773064-39773083 | Msa1018920:intron | 55.0% |
| ! | AGCACCACACGAGCTAGTCT+AGG | + | chr7_1:39774275-39774294 | None:intergenic | 55.0% |
| CAGACATGGACGTGAGAGGG+TGG | + | chr7_1:39769957-39769976 | None:intergenic | 60.0% | |
| CACCCTCTCACGTCCATGTC+TGG | - | chr7_1:39769955-39769974 | Msa1018920:intron | 60.0% | |
| GATCCTCCAGTTGCACCCAC+AGG | - | chr7_1:39770434-39770453 | Msa1018920:intron | 60.0% | |
| !! | GGGTTGGCTTCGGTGCTTAG+TGG | - | chr7_1:39772093-39772112 | Msa1018920:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 39768059 | 39774618 | 39768059 | ID=Msa1018920;Name=Msa1018920 |
| chr7_1 | mRNA | 39768059 | 39774618 | 39768059 | ID=Msa1018920-mRNA-1;Parent=Msa1018920;Name=Msa1018920-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|0.84|1|1|13|0|628 |
| chr7_1 | exon | 39774175 | 39774618 | 39774175 | ID=Msa1018920-mRNA-1:exon:7722;Parent=Msa1018920-mRNA-1 |
| chr7_1 | exon | 39773454 | 39773528 | 39773454 | ID=Msa1018920-mRNA-1:exon:7721;Parent=Msa1018920-mRNA-1 |
| chr7_1 | exon | 39773205 | 39773306 | 39773205 | ID=Msa1018920-mRNA-1:exon:7720;Parent=Msa1018920-mRNA-1 |
| chr7_1 | exon | 39772411 | 39772460 | 39772411 | ID=Msa1018920-mRNA-1:exon:7719;Parent=Msa1018920-mRNA-1 |
| chr7_1 | exon | 39772222 | 39772310 | 39772222 | ID=Msa1018920-mRNA-1:exon:7718;Parent=Msa1018920-mRNA-1 |
| chr7_1 | exon | 39771886 | 39772036 | 39771886 | ID=Msa1018920-mRNA-1:exon:7717;Parent=Msa1018920-mRNA-1 |
| chr7_1 | exon | 39771619 | 39771724 | 39771619 | ID=Msa1018920-mRNA-1:exon:7716;Parent=Msa1018920-mRNA-1 |
| chr7_1 | exon | 39771346 | 39771528 | 39771346 | ID=Msa1018920-mRNA-1:exon:7715;Parent=Msa1018920-mRNA-1 |
| chr7_1 | exon | 39771019 | 39771252 | 39771019 | ID=Msa1018920-mRNA-1:exon:7714;Parent=Msa1018920-mRNA-1 |
| chr7_1 | exon | 39770031 | 39770127 | 39770031 | ID=Msa1018920-mRNA-1:exon:7713;Parent=Msa1018920-mRNA-1 |
| chr7_1 | exon | 39769293 | 39769351 | 39769293 | ID=Msa1018920-mRNA-1:exon:7712;Parent=Msa1018920-mRNA-1 |
| chr7_1 | exon | 39768352 | 39768585 | 39768352 | ID=Msa1018920-mRNA-1:exon:7711;Parent=Msa1018920-mRNA-1 |
| chr7_1 | exon | 39768059 | 39768121 | 39768059 | ID=Msa1018920-mRNA-1:exon:7710;Parent=Msa1018920-mRNA-1 |
| chr7_1 | CDS | 39774175 | 39774618 | 39774175 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
| chr7_1 | CDS | 39773454 | 39773528 | 39773454 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
| chr7_1 | CDS | 39773205 | 39773306 | 39773205 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
| chr7_1 | CDS | 39772411 | 39772460 | 39772411 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
| chr7_1 | CDS | 39772222 | 39772310 | 39772222 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
| chr7_1 | CDS | 39771886 | 39772036 | 39771886 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
| chr7_1 | CDS | 39771619 | 39771724 | 39771619 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
| chr7_1 | CDS | 39771346 | 39771528 | 39771346 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
| chr7_1 | CDS | 39771019 | 39771252 | 39771019 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
| chr7_1 | CDS | 39770031 | 39770127 | 39770031 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
| chr7_1 | CDS | 39769293 | 39769351 | 39769293 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
| chr7_1 | CDS | 39768352 | 39768585 | 39768352 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
| chr7_1 | CDS | 39768059 | 39768121 | 39768059 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
| Gene Sequence |
| Protein sequence |