Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1018920 | AES79015.2 | 77.000 | 100 | 23 | 0 | 520 | 619 | 431 | 530 | 1.35e-40 | 167 |
Msa1018920 | AES79015.2 | 84.740 | 557 | 34 | 4 | 1 | 511 | 1 | 552 | 0.0 | 939 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1018920 | sp|Q8GZB6|SUVH4_ARATH | 54.217 | 332 | 147 | 4 | 184 | 511 | 290 | 620 | 3.98e-120 | 373 |
Msa1018920 | sp|Q8GZB6|SUVH4_ARATH | 57.447 | 94 | 37 | 2 | 530 | 622 | 510 | 601 | 5.39e-23 | 107 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1018920 | G7KY38 | 77.000 | 100 | 23 | 0 | 520 | 619 | 431 | 530 | 6.43e-41 | 167 |
Msa1018920 | G7KY38 | 84.740 | 557 | 34 | 4 | 1 | 511 | 1 | 552 | 0.0 | 939 |
Gene ID | Type | Classification |
---|---|---|
Msa1018920 | TR | SET |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1018920 | MtrunA17_Chr7g0234361 | 78.286 | 350 | 24 | 5 | 1 | 304 | 1 | 344 | 2.31e-177 | 507 |
Msa1018920 | MtrunA17_Chr6g0476121 | 55.723 | 332 | 143 | 3 | 184 | 511 | 308 | 639 | 1.55e-121 | 374 |
Msa1018920 | MtrunA17_Chr6g0476121 | 57.778 | 90 | 38 | 0 | 530 | 619 | 528 | 617 | 2.35e-23 | 104 |
Msa1018920 | MtrunA17_Chr7g0252211 | 55.723 | 332 | 143 | 3 | 184 | 511 | 422 | 753 | 3.90e-121 | 377 |
Msa1018920 | MtrunA17_Chr7g0252211 | 57.778 | 90 | 38 | 0 | 530 | 619 | 642 | 731 | 1.78e-23 | 105 |
Msa1018920 | MtrunA17_Chr6g0476111 | 55.422 | 332 | 144 | 3 | 184 | 511 | 359 | 690 | 1.39e-120 | 373 |
Msa1018920 | MtrunA17_Chr6g0476111 | 57.778 | 90 | 38 | 0 | 530 | 619 | 579 | 668 | 3.11e-23 | 104 |
Msa1018920 | MtrunA17_Chr5g0399801 | 45.139 | 288 | 144 | 8 | 229 | 513 | 811 | 1087 | 7.93e-66 | 234 |
Msa1018920 | MtrunA17_Chr5g0399801 | 51.515 | 66 | 32 | 0 | 554 | 619 | 998 | 1063 | 4.85e-14 | 75.9 |
Msa1018920 | MtrunA17_Chr4g0003501 | 41.801 | 311 | 163 | 7 | 204 | 510 | 654 | 950 | 9.63e-63 | 224 |
Msa1018920 | MtrunA17_Chr4g0003501 | 43.662 | 71 | 40 | 0 | 557 | 627 | 867 | 937 | 1.70e-13 | 73.9 |
Msa1018920 | MtrunA17_Chr4g0003511 | 41.781 | 292 | 150 | 7 | 225 | 510 | 770 | 1047 | 4.06e-62 | 223 |
Msa1018920 | MtrunA17_Chr4g0003511 | 46.377 | 69 | 37 | 0 | 553 | 621 | 960 | 1028 | 1.56e-14 | 77.4 |
Msa1018920 | MtrunA17_Chr7g0255181 | 30.120 | 332 | 203 | 6 | 186 | 512 | 395 | 702 | 1.46e-44 | 169 |
Msa1018920 | MtrunA17_Chr7g0232841 | 33.882 | 304 | 153 | 11 | 225 | 516 | 260 | 527 | 1.32e-41 | 158 |
Msa1018920 | MtrunA17_Chr7g0232811 | 33.333 | 303 | 155 | 10 | 225 | 516 | 272 | 538 | 4.63e-41 | 157 |
Msa1018920 | MtrunA17_Chr8g0368911 | 32.353 | 306 | 189 | 10 | 186 | 485 | 456 | 749 | 3.54e-40 | 157 |
Msa1018920 | MtrunA17_Chr8g0354821 | 33.220 | 295 | 184 | 8 | 225 | 513 | 399 | 686 | 4.97e-40 | 155 |
Msa1018920 | MtrunA17_Chr8g0368901 | 33.660 | 306 | 185 | 10 | 186 | 485 | 463 | 756 | 6.04e-40 | 156 |
Msa1018920 | MtrunA17_Chr3g0080761 | 31.507 | 365 | 213 | 11 | 178 | 512 | 304 | 661 | 1.46e-39 | 154 |
Msa1018920 | MtrunA17_Chr8g0369301 | 35.632 | 261 | 153 | 7 | 229 | 485 | 487 | 736 | 1.33e-38 | 152 |
Msa1018920 | MtrunA17_Chr1g0163051 | 34.686 | 271 | 164 | 7 | 225 | 492 | 392 | 652 | 1.33e-38 | 151 |
Msa1018920 | MtrunA17_Chr1g0163041 | 32.692 | 312 | 192 | 9 | 186 | 491 | 271 | 570 | 1.65e-38 | 150 |
Msa1018920 | MtrunA17_Chr7g0232981 | 33.451 | 284 | 150 | 7 | 228 | 510 | 266 | 511 | 1.36e-36 | 143 |
Msa1018920 | MtrunA17_Chr3g0094881 | 30.968 | 310 | 192 | 10 | 186 | 485 | 325 | 622 | 2.48e-34 | 138 |
Msa1018920 | MtrunA17_Chr1g0170651 | 34.091 | 308 | 151 | 11 | 214 | 512 | 279 | 543 | 5.08e-33 | 134 |
Msa1018920 | MtrunA17_Chr6g0467401 | 29.206 | 315 | 195 | 11 | 184 | 485 | 264 | 563 | 1.29e-31 | 129 |
Msa1018920 | MtrunA17_Chr6g0467381 | 29.206 | 315 | 195 | 11 | 184 | 485 | 264 | 563 | 1.85e-31 | 129 |
Msa1018920 | MtrunA17_Chr1g0183321 | 30.725 | 345 | 153 | 14 | 229 | 515 | 430 | 746 | 2.88e-31 | 129 |
Msa1018920 | MtrunA17_Chr6g0467421 | 29.206 | 315 | 195 | 11 | 184 | 485 | 264 | 563 | 4.52e-31 | 128 |
Msa1018920 | MtrunA17_Chr6g0467531 | 28.707 | 317 | 194 | 12 | 184 | 485 | 264 | 563 | 7.65e-31 | 127 |
Msa1018920 | MtrunA17_Chr6g0467411 | 29.630 | 270 | 169 | 9 | 225 | 485 | 224 | 481 | 3.56e-27 | 115 |
Msa1018920 | MtrunA17_Chr8g0373821 | 35.897 | 195 | 97 | 3 | 297 | 486 | 346 | 517 | 1.77e-26 | 114 |
Msa1018920 | MtrunA17_Chr1g0190311 | 30.435 | 345 | 149 | 14 | 228 | 511 | 326 | 640 | 2.45e-26 | 114 |
Msa1018920 | MtrunA17_Chr5g0403241 | 29.836 | 305 | 149 | 10 | 225 | 488 | 1207 | 1487 | 3.44e-26 | 114 |
Msa1018920 | MtrunA17_Chr4g0075321 | 33.945 | 218 | 119 | 5 | 296 | 512 | 868 | 1061 | 1.42e-25 | 112 |
Msa1018920 | MtrunA17_Chr7g0262001 | 27.811 | 338 | 170 | 11 | 229 | 515 | 388 | 702 | 1.19e-24 | 109 |
Msa1018920 | MtrunA17_Chr7g0232751 | 48.889 | 90 | 44 | 1 | 427 | 516 | 31 | 118 | 9.79e-24 | 96.7 |
Msa1018920 | MtrunA17_Chr2g0306961 | 29.851 | 201 | 132 | 4 | 287 | 485 | 269 | 462 | 1.20e-22 | 101 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1018920 | AT5G13960.2 | 54.217 | 332 | 147 | 4 | 184 | 511 | 156 | 486 | 1.06e-121 | 370 |
Msa1018920 | AT5G13960.2 | 57.447 | 94 | 37 | 2 | 530 | 622 | 376 | 467 | 3.55e-24 | 107 |
Msa1018920 | AT5G13960.1 | 54.217 | 332 | 147 | 4 | 184 | 511 | 290 | 620 | 4.04e-121 | 373 |
Msa1018920 | AT5G13960.1 | 57.447 | 94 | 37 | 2 | 530 | 622 | 510 | 601 | 5.48e-24 | 107 |
Msa1018920 | AT2G35160.5 | 34.746 | 354 | 186 | 9 | 167 | 512 | 439 | 755 | 1.17e-53 | 196 |
Msa1018920 | AT2G35160.2 | 34.746 | 354 | 186 | 9 | 167 | 512 | 475 | 791 | 2.27e-53 | 196 |
Msa1018920 | AT2G35160.3 | 34.746 | 354 | 186 | 9 | 167 | 512 | 475 | 791 | 2.27e-53 | 196 |
Msa1018920 | AT2G35160.1 | 34.746 | 354 | 186 | 9 | 167 | 512 | 475 | 791 | 2.27e-53 | 196 |
Msa1018920 | AT2G35160.4 | 34.746 | 354 | 186 | 9 | 167 | 512 | 475 | 791 | 2.27e-53 | 196 |
Msa1018920 | AT2G22740.2 | 39.610 | 308 | 162 | 9 | 214 | 511 | 493 | 786 | 2.55e-53 | 196 |
Msa1018920 | AT2G22740.2 | 45.070 | 71 | 39 | 0 | 557 | 627 | 702 | 772 | 4.29e-12 | 69.7 |
Msa1018920 | AT2G22740.1 | 39.610 | 308 | 162 | 9 | 214 | 511 | 493 | 786 | 2.55e-53 | 196 |
Msa1018920 | AT2G22740.1 | 45.070 | 71 | 39 | 0 | 557 | 627 | 702 | 772 | 4.29e-12 | 69.7 |
Msa1018920 | AT1G73100.1 | 29.381 | 388 | 255 | 8 | 129 | 512 | 294 | 666 | 1.24e-43 | 166 |
Msa1018920 | AT2G33290.1 | 35.526 | 304 | 163 | 10 | 204 | 485 | 346 | 638 | 1.76e-41 | 160 |
Msa1018920 | AT2G33290.3 | 35.526 | 304 | 163 | 10 | 204 | 485 | 346 | 638 | 1.76e-41 | 160 |
Msa1018920 | AT2G33290.4 | 35.526 | 304 | 163 | 10 | 204 | 485 | 346 | 638 | 1.76e-41 | 160 |
Msa1018920 | AT2G33290.2 | 35.526 | 304 | 163 | 10 | 204 | 485 | 346 | 638 | 1.76e-41 | 160 |
Msa1018920 | AT4G13460.1 | 32.581 | 310 | 193 | 9 | 186 | 489 | 342 | 641 | 2.53e-41 | 159 |
Msa1018920 | AT4G13460.2 | 32.581 | 310 | 193 | 9 | 186 | 489 | 342 | 641 | 2.53e-41 | 159 |
Msa1018920 | AT5G04940.2 | 32.333 | 300 | 187 | 8 | 219 | 512 | 378 | 667 | 1.75e-39 | 154 |
Msa1018920 | AT5G04940.1 | 32.333 | 300 | 187 | 8 | 219 | 512 | 378 | 667 | 1.75e-39 | 154 |
Msa1018920 | AT1G17770.1 | 30.820 | 305 | 190 | 9 | 219 | 512 | 396 | 690 | 4.39e-33 | 135 |
Msa1018920 | AT2G23740.1 | 32.537 | 335 | 168 | 14 | 210 | 513 | 1066 | 1373 | 1.54e-31 | 132 |
Msa1018920 | AT2G23740.3 | 32.537 | 335 | 168 | 14 | 210 | 513 | 1073 | 1380 | 1.69e-31 | 131 |
Msa1018920 | AT2G23740.6 | 32.537 | 335 | 168 | 14 | 210 | 513 | 1073 | 1380 | 1.69e-31 | 131 |
Msa1018920 | AT2G23740.2 | 32.537 | 335 | 168 | 14 | 210 | 513 | 1073 | 1380 | 1.69e-31 | 131 |
Msa1018920 | AT3G04380.2 | 27.679 | 336 | 167 | 10 | 229 | 511 | 119 | 431 | 2.71e-24 | 107 |
Msa1018920 | AT3G04380.1 | 27.679 | 336 | 167 | 10 | 229 | 511 | 146 | 458 | 2.93e-24 | 107 |
Msa1018920 | AT3G04380.3 | 27.679 | 336 | 167 | 10 | 229 | 511 | 130 | 442 | 3.45e-24 | 106 |
Msa1018920 | AT3G04380.6 | 27.679 | 336 | 167 | 10 | 229 | 511 | 119 | 431 | 3.63e-24 | 106 |
Msa1018920 | AT3G04380.4 | 27.679 | 336 | 167 | 10 | 229 | 511 | 146 | 458 | 3.69e-24 | 106 |
Msa1018920 | AT3G04380.5 | 27.679 | 336 | 167 | 10 | 229 | 511 | 103 | 415 | 3.90e-24 | 106 |
Msa1018920 | AT2G24740.1 | 29.293 | 297 | 180 | 11 | 225 | 512 | 477 | 752 | 2.85e-23 | 105 |
Msa1018920 | AT2G23740.4 | 32.075 | 265 | 126 | 12 | 210 | 443 | 1073 | 1314 | 5.33e-21 | 98.6 |
Msa1018920 | AT2G23740.5 | 32.075 | 265 | 126 | 12 | 210 | 443 | 1073 | 1314 | 5.33e-21 | 98.6 |
Msa1018920 | AT3G03750.2 | 31.120 | 241 | 124 | 8 | 274 | 510 | 143 | 345 | 2.51e-20 | 93.6 |
Msa1018920 | AT4G30860.1 | 28.000 | 200 | 102 | 6 | 313 | 512 | 305 | 462 | 6.28e-12 | 68.9 |
Find 128 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTTGATGGACTTGACTTT+AGG | 0.192680 | 7_1:-39774232 | Msa1018920:CDS |
TGCATAGATGCTGGTTCTTT+TGG | 0.193774 | 7_1:-39771149 | Msa1018920:CDS |
CGTCCAATGTTCGTCTTTGA+TGG | 0.216021 | 7_1:-39774245 | Msa1018920:CDS |
TGCATAGATGCTGGTTCTTT+TGG | 0.238650 | 7_1:-39768482 | Msa1018920:CDS |
AACTGACCATACCTCTCTTA+TGG | 0.257716 | 7_1:+39774363 | None:intergenic |
TTGGCTTTAGGTTCATTTAA+TGG | 0.273794 | 7_1:-39772448 | Msa1018920:intron |
GTTTGCTCACAACTTCAAAA+TGG | 0.284170 | 7_1:-39774410 | Msa1018920:CDS |
TCTTACCGCCCAACCTTTCT+TGG | 0.287241 | 7_1:+39771493 | None:intergenic |
GAAACTTTGTTTCCACATTT+AGG | 0.290820 | 7_1:+39771647 | None:intergenic |
CTTTGATGGACTTGACTTTA+GGG | 0.301083 | 7_1:-39774231 | Msa1018920:CDS |
TGCTAAAGTGGGAACATATA+AGG | 0.341389 | 7_1:-39773204 | Msa1018920:intron |
CAGGAACTCACCTATGACTA+TGG | 0.342829 | 7_1:-39770108 | Msa1018920:CDS |
TAATATCCGTATTACCTGAT+AGG | 0.344203 | 7_1:+39768337 | None:intergenic |
ACTGACCATACCTCTCTTAT+GGG | 0.344917 | 7_1:+39774364 | None:intergenic |
TGGAAGTAAAGAGGAAAGTT+TGG | 0.346273 | 7_1:-39774447 | Msa1018920:CDS |
CCAGCATCTATGCAATATTC+AGG | 0.354345 | 7_1:+39768491 | None:intergenic |
CCAGCATCTATGCAATATTC+AGG | 0.354345 | 7_1:+39771158 | None:intergenic |
ATGTGACATACCTCCCTATC+AGG | 0.371814 | 7_1:-39768351 | Msa1018920:intron |
AGAAGACATACCTCCCTATC+AGG | 0.387240 | 7_1:-39771018 | Msa1018920:intron |
AGCAAGAATCGACACAAGAT+AGG | 0.395673 | 7_1:-39773488 | Msa1018920:CDS |
CAAGGTGTACCCTGATGAAA+TGG | 0.396172 | 7_1:-39769298 | Msa1018920:CDS |
CACACAATCAATGGTGTAGA+TGG | 0.399488 | 7_1:-39771353 | Msa1018920:CDS |
GCACCAGTTGTCGAGTATAT+TGG | 0.400887 | 7_1:-39771446 | Msa1018920:CDS |
ATTGATAACGAATACGTTCC+TGG | 0.401461 | 7_1:-39773269 | Msa1018920:CDS |
TGGAAACAAAGTTTCTCAAC+AGG | 0.404546 | 7_1:-39771639 | Msa1018920:CDS |
AGTATCTGATAAATAAGCTT+CGG | 0.405640 | 7_1:-39773232 | Msa1018920:CDS |
TTGCATCCCGCAGCACTAGA+TGG | 0.412772 | 7_1:+39771967 | None:intergenic |
CATGTTGAAAAGATTGAACT+TGG | 0.416250 | 7_1:-39774467 | Msa1018920:CDS |
GTATCTGATAAATAAGCTTC+GGG | 0.422102 | 7_1:-39773231 | Msa1018920:CDS |
CTTACCGCCCAACCTTTCTT+GGG | 0.422197 | 7_1:+39771494 | None:intergenic |
GATAAATTGTTTATAGGCAA+TGG | 0.426330 | 7_1:+39768545 | None:intergenic |
TGTCCTTGTGCTAGTCATAA+TGG | 0.433090 | 7_1:-39771916 | Msa1018920:CDS |
TGTCCTTGAGAGAAACATCT+AGG | 0.434783 | 7_1:-39774202 | Msa1018920:CDS |
ACACATTGTACAAAGAGGTT+TGG | 0.447308 | 7_1:+39768425 | None:intergenic |
ACACATTGTACAAAGAGGTT+TGG | 0.447308 | 7_1:+39771092 | None:intergenic |
ACAACGGATTTGTTGCATAC+AGG | 0.451082 | 7_1:-39768075 | Msa1018920:CDS |
TTTCATACAATAACATTGGC+AGG | 0.452872 | 7_1:-39771885 | Msa1018920:intron |
TTCTTTAAGTTTGGTATGCA+AGG | 0.458357 | 7_1:-39772297 | Msa1018920:intron |
ATCGTACTCCCAAGAAAGGT+TGG | 0.459933 | 7_1:-39771502 | Msa1018920:CDS |
TACAAAGAGGAATACCTGAT+AGG | 0.463396 | 7_1:+39771004 | None:intergenic |
TGGAGGATCATCAAAATCAT+TGG | 0.466153 | 7_1:+39772235 | None:intergenic |
TTCTGAAAATGAGGCTATGA+TGG | 0.472623 | 7_1:-39774579 | Msa1018920:CDS |
GATAAATTGCTTATAGGCAA+TGG | 0.479915 | 7_1:+39771212 | None:intergenic |
GATTGTTTGCACACAATCAA+TGG | 0.481537 | 7_1:-39771362 | Msa1018920:CDS |
ACACCAATATACTCGACAAC+TGG | 0.483092 | 7_1:+39771443 | None:intergenic |
AGTCTTGAACTCACTCTTGT+TGG | 0.483801 | 7_1:+39774554 | None:intergenic |
TCTTCTCAAAGAGTTGAGCT+TGG | 0.484140 | 7_1:+39774313 | None:intergenic |
ACATGGGACTTTATCCCATC+AGG | 0.487648 | 7_1:-39771470 | Msa1018920:CDS |
GAGTGTGTAACCATAGTCAT+AGG | 0.489551 | 7_1:+39770098 | None:intergenic |
ACAAAGAGGAATACCTGATA+GGG | 0.490411 | 7_1:+39771005 | None:intergenic |
GCTTCGGGAACTTGCTAAAG+TGG | 0.493084 | 7_1:-39773216 | Msa1018920:CDS |
CTTAGCAAGGAGACGAAGAT+TGG | 0.494551 | 7_1:+39774175 | None:intergenic |
AATATCCGTATTACCTGATA+GGG | 0.495794 | 7_1:+39768338 | None:intergenic |
TCGTACTCCCAAGAAAGGTT+GGG | 0.500282 | 7_1:-39771501 | Msa1018920:CDS |
AGAGGTTTGGTTCACATCCA+TGG | 0.504457 | 7_1:+39768438 | None:intergenic |
AGAGGTTTGGTTCACATCCA+TGG | 0.504457 | 7_1:+39771105 | None:intergenic |
CTAGATGGAACTTCAATGCT+TGG | 0.505910 | 7_1:+39771982 | None:intergenic |
CGACAACTGGTGCACCTGAT+GGG | 0.509774 | 7_1:+39771456 | None:intergenic |
TACTTCGAAGTAGTGATTCC+AGG | 0.513375 | 7_1:+39773251 | None:intergenic |
GTTTCAAGATTTATCAACCA+TGG | 0.515474 | 7_1:-39771122 | Msa1018920:CDS |
GTTTATCGTACTCCCAAGAA+AGG | 0.517387 | 7_1:-39771506 | Msa1018920:CDS |
TCGACAACTGGTGCACCTGA+TGG | 0.518260 | 7_1:+39771455 | None:intergenic |
CAATCTTCGTCTCCTTGCTA+AGG | 0.519599 | 7_1:-39774174 | Msa1018920:intron |
GTTTCAAGATTTATCAACCA+TGG | 0.524532 | 7_1:-39768455 | Msa1018920:CDS |
GTACCCTGATGAAATGGAAA+AGG | 0.529155 | 7_1:-39769292 | Msa1018920:intron |
GAAGTTCCATCTAGTGCTGC+GGG | 0.529357 | 7_1:-39771973 | Msa1018920:CDS |
AAACTCTTTCTTCTTCTCCA+AGG | 0.531848 | 7_1:-39772410 | Msa1018920:intron |
CCTGAATATTGCATAGATGC+TGG | 0.535805 | 7_1:-39768491 | Msa1018920:CDS |
CCTGAATATTGCATAGATGC+TGG | 0.535805 | 7_1:-39771158 | Msa1018920:CDS |
CTAAGTAGAGACGATGAGCT+AGG | 0.538306 | 7_1:-39771419 | Msa1018920:CDS |
TTTAGGTTCATTTAATGGAA+GGG | 0.538367 | 7_1:-39772443 | Msa1018920:intron |
CTTTAGGTTCATTTAATGGA+AGG | 0.538474 | 7_1:-39772444 | Msa1018920:intron |
CACTAAGAGTTCTGAAAATG+AGG | 0.540450 | 7_1:-39774588 | Msa1018920:CDS |
TTTCATCAGGGTACACCTTG+TGG | 0.544186 | 7_1:+39769301 | None:intergenic |
CTAGACATCGTGGTCGAATG+TGG | 0.546755 | 7_1:-39771689 | Msa1018920:CDS |
GATTGAACTTGGAAGTAAAG+AGG | 0.553834 | 7_1:-39774456 | Msa1018920:CDS |
CTAAATTAGAGGCACTGCGA+AGG | 0.554860 | 7_1:-39769338 | Msa1018920:intron |
AAGGTTGGGCGGTAAGAACA+TGG | 0.558115 | 7_1:-39771487 | Msa1018920:CDS |
ACTAGCACAAGGACATCTCT+TGG | 0.560065 | 7_1:+39771924 | None:intergenic |
GCAAGAATCGACACAAGATA+GGG | 0.566361 | 7_1:-39773487 | Msa1018920:CDS |
GGGCTTAACTTACCGACTTG+AGG | 0.566843 | 7_1:-39771618 | Msa1018920:intron |
AAGCCTAGATGTTTCTCTCA+AGG | 0.570477 | 7_1:+39774199 | None:intergenic |
TGTCATTCAAGTTCAAGAAG+TGG | 0.578513 | 7_1:-39774281 | Msa1018920:CDS |
AGTCCATCAAAGACGAACAT+TGG | 0.579758 | 7_1:+39774242 | None:intergenic |
TGAGAACACATTGTACAAAG+AGG | 0.579762 | 7_1:+39768420 | None:intergenic |
TGAGAACACATTGTACAAAG+AGG | 0.579762 | 7_1:+39771087 | None:intergenic |
GATAGTGTGTCTGATTCTGA+TGG | 0.580918 | 7_1:-39770075 | Msa1018920:CDS |
TAAATTAGAGGCACTGCGAA+GGG | 0.584204 | 7_1:-39769337 | Msa1018920:intron |
GAAGATATAATCATTTCCGT+TGG | 0.584617 | 7_1:+39771391 | None:intergenic |
TGTGGACCGCAATGTGGATG+CGG | 0.589925 | 7_1:-39771671 | Msa1018920:CDS |
TGCTGCGGGATGCAATTGCA+AGG | 0.591722 | 7_1:-39771959 | Msa1018920:CDS |
TCAATGTCATTGTGGTGCAA+AGG | 0.596456 | 7_1:-39770037 | Msa1018920:CDS |
GTATGCAAGGACATTAGCAA+TGG | 0.598177 | 7_1:-39772284 | Msa1018920:CDS |
AATGTTATTGTATGAAAACT+CGG | 0.598679 | 7_1:+39771891 | None:intergenic |
TTACCTGTGGGTGCAACTGG+AGG | 0.602916 | 7_1:+39772218 | None:intergenic |
CTTCGGGAACTTGCTAAAGT+GGG | 0.602929 | 7_1:-39773215 | Msa1018920:CDS |
TATTTCCCATAAGAGAGGTA+TGG | 0.605924 | 7_1:-39774369 | Msa1018920:CDS |
GATCCTCCAGTTGCACCCAC+AGG | 0.606455 | 7_1:-39772221 | Msa1018920:intron |
AAGTTTGGTATCAACAACAA+AGG | 0.612619 | 7_1:-39774432 | Msa1018920:CDS |
AGCACCACACGAGCTAGTCT+AGG | 0.615183 | 7_1:+39768383 | None:intergenic |
AGCACTACACGAGCTAGTCT+AGG | 0.619841 | 7_1:+39771050 | None:intergenic |
CATTCGACCACGATGTCTAG+AGG | 0.624366 | 7_1:+39771692 | None:intergenic |
CAATGGTGTAGATGGAAGAG+AGG | 0.625940 | 7_1:-39771345 | Msa1018920:intron |
TTTGATGGACTTGACTTTAG+GGG | 0.626842 | 7_1:-39774230 | Msa1018920:CDS |
ATCCGTATTACCTGATAGGG+AGG | 0.627756 | 7_1:+39768341 | None:intergenic |
TATAATATTTACAACAGCAG+CGG | 0.628158 | 7_1:-39774509 | Msa1018920:CDS |
TGTGGATGCGGACCTAAATG+TGG | 0.629564 | 7_1:-39771659 | Msa1018920:CDS |
GATGATATTTCCCATAAGAG+AGG | 0.634933 | 7_1:-39774374 | Msa1018920:CDS |
TGAAGTTCCATCTAGTGCTG+CGG | 0.634941 | 7_1:-39771974 | Msa1018920:CDS |
ATTGTAGAATGACCTCAAGT+CGG | 0.636167 | 7_1:+39771606 | None:intergenic |
TTGTATCACACACCTTAGCA+AGG | 0.638217 | 7_1:+39774162 | None:intergenic |
GGTCTTGATGCACTTCCACA+AGG | 0.639379 | 7_1:-39769316 | Msa1018920:CDS |
AAACAGCTTCAATGTCATTG+TGG | 0.646249 | 7_1:-39770045 | Msa1018920:CDS |
AAGAGGAATACCTGATAGGG+AGG | 0.649275 | 7_1:+39771008 | None:intergenic |
CTTGAACTTGAATGACAGCG+AGG | 0.651390 | 7_1:+39774287 | None:intergenic |
GCTGCGGGATGCAATTGCAA+GGG | 0.655088 | 7_1:-39771958 | Msa1018920:CDS |
AGGTTGGGCGGTAAGAACAT+GGG | 0.665196 | 7_1:-39771486 | Msa1018920:CDS |
AGATCCTAGACTAGCTCGTG+TGG | 0.665227 | 7_1:-39768387 | Msa1018920:CDS |
TACTCCCAAGAAAGGTTGGG+CGG | 0.669811 | 7_1:-39771498 | Msa1018920:CDS |
GTCGAATGTGGACCGCAATG+TGG | 0.680163 | 7_1:-39771677 | Msa1018920:CDS |
GGAAACAAAGTTTCTCAACA+GGG | 0.682009 | 7_1:-39771638 | Msa1018920:CDS |
TTAGGTCCGCATCCACATTG+CGG | 0.684443 | 7_1:+39771665 | None:intergenic |
GTTGTCGTTTCATTTGACAA+CGG | 0.702901 | 7_1:-39768091 | Msa1018920:CDS |
GATGAGCTAGGAAGTGCCAA+CGG | 0.706121 | 7_1:-39771407 | Msa1018920:CDS |
GAGCCATTATGACTAGCACA+AGG | 0.716781 | 7_1:+39771913 | None:intergenic |
GAGCTAGTCTAGGATCTCTG+TGG | 0.733830 | 7_1:+39768393 | None:intergenic |
GAGCTAGTCTAGGATCTCTG+TGG | 0.733830 | 7_1:+39771060 | None:intergenic |
GATCGAGCCTCTAGACATCG+TGG | 0.739663 | 7_1:-39771699 | Msa1018920:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAATTGATTTTATTAGTTTT+TGG | - | chr7_1:39769089-39769108 | Msa1018920:intron | 10.0% |
!! | TAAAATATGTATGAAATTTA+GGG | - | chr7_1:39771364-39771383 | Msa1018920:CDS | 10.0% |
!!! | ATAAATTTTATTTTGAAAGA+AGG | - | chr7_1:39772364-39772383 | Msa1018920:intron | 10.0% |
!!! | TTAATTATTTTCATACATTT+TGG | - | chr7_1:39772455-39772474 | Msa1018920:intron | 10.0% |
!!! | TAATTATTTTCATACATTTT+GGG | - | chr7_1:39772456-39772475 | Msa1018920:intron | 10.0% |
!! | GTAAAAATTTAATAAACAAT+TGG | - | chr7_1:39772509-39772528 | Msa1018920:intron | 10.0% |
!! | ATAAATGTTTATTTATATGT+AGG | + | chr7_1:39773192-39773211 | None:intergenic | 10.0% |
!! | ATATATACCTAAATATATAA+TGG | - | chr7_1:39773446-39773465 | Msa1018920:intron | 10.0% |
!! | AAAAAAACCATTATATATTT+AGG | + | chr7_1:39773456-39773475 | None:intergenic | 10.0% |
!!! | ATATATAATGGTTTTTTTTA+TGG | - | chr7_1:39773458-39773477 | Msa1018920:CDS | 10.0% |
!! | TATTGTTATAAAATCATATT+TGG | - | chr7_1:39773675-39773694 | Msa1018920:intron | 10.0% |
!!! | AATTTGTTTAAGATAATTTA+TGG | - | chr7_1:39773812-39773831 | Msa1018920:intron | 10.0% |
!! | ATAAAATATGTATGAAATTT+AGG | - | chr7_1:39774030-39774049 | Msa1018920:intron | 10.0% |
!! | TAAAATATGTATGAAATTTA+GGG | - | chr7_1:39771364-39771383 | Msa1018920:CDS | 10.0% |
!! | TGAAATGAAATATAATTAAA+AGG | - | chr7_1:39774402-39774421 | Msa1018920:CDS | 10.0% |
!! | GAAATGAAATATAATTAAAA+GGG | - | chr7_1:39774403-39774422 | Msa1018920:CDS | 10.0% |
!! | ATTGTATTTATACAATTATG+AGG | - | chr7_1:39768784-39768803 | Msa1018920:intron | 15.0% |
!!! | GTTTTTGCATTTTTAAAAAA+GGG | + | chr7_1:39770489-39770508 | None:intergenic | 15.0% |
!!! | TGTTTTTGCATTTTTAAAAA+AGG | + | chr7_1:39770490-39770509 | None:intergenic | 15.0% |
!!! | TCATGATGTTTTAAAATTTT+AGG | - | chr7_1:39770619-39770638 | Msa1018920:intron | 15.0% |
!! | TTACATATTATAAACATCAA+TGG | + | chr7_1:39771100-39771119 | None:intergenic | 15.0% |
!! | GTAAAATATGTATGAAATTT+AGG | - | chr7_1:39771363-39771382 | Msa1018920:CDS | 15.0% |
!! | TATTGTTAATATAATCGATA+TGG | + | chr7_1:39772034-39772053 | None:intergenic | 15.0% |
!! | AAAAAATAACAGTATTAAGA+CGG | - | chr7_1:39772260-39772279 | Msa1018920:CDS | 15.0% |
!!! | AGAAATTTTATTTTGAAAGA+AGG | - | chr7_1:39772317-39772336 | Msa1018920:intron | 15.0% |
!! | TGCATTATAAAATAGTATAA+GGG | - | chr7_1:39772914-39772933 | Msa1018920:intron | 15.0% |
!! | TCAATACATAAATAAAATAC+AGG | - | chr7_1:39772946-39772965 | Msa1018920:intron | 15.0% |
!! | CAATACATAAATAAAATACA+GGG | - | chr7_1:39772947-39772966 | Msa1018920:intron | 15.0% |
!!! | TTTTTTTTTAACAAATTGTG+AGG | - | chr7_1:39773289-39773308 | Msa1018920:intron | 15.0% |
!!! | TGTTTTTGAAATATACATAT+TGG | + | chr7_1:39773742-39773761 | None:intergenic | 15.0% |
!!! | TTTTCAGATAAATTGTTTAT+AGG | + | chr7_1:39774119-39774138 | None:intergenic | 15.0% |
!! | TAAACAATTTATCTGAAAAA+AGG | - | chr7_1:39774120-39774139 | Msa1018920:intron | 15.0% |
!! | AAACAATTTATCTGAAAAAA+GGG | - | chr7_1:39774121-39774140 | Msa1018920:intron | 15.0% |
!! | ACATAAATAATATGCAACAT+TGG | + | chr7_1:39768561-39768580 | None:intergenic | 20.0% |
!! | TGTAGTAAGATGTATAAATA+TGG | - | chr7_1:39768724-39768743 | Msa1018920:intron | 20.0% |
!!! | TTTCGTTGTTTTTAGTTTTT+AGG | - | chr7_1:39769260-39769279 | Msa1018920:intron | 20.0% |
!! | AAAATTAAGATAGTATCATG+AGG | + | chr7_1:39769327-39769346 | None:intergenic | 20.0% |
!! | GTGATGATATAGAAAATATT+TGG | + | chr7_1:39769756-39769775 | None:intergenic | 20.0% |
!! | TGTAATTAGTGTTAGAATTT+GGG | - | chr7_1:39769827-39769846 | Msa1018920:intron | 20.0% |
!! | TGCAAAATCAATTTAATAAG+AGG | - | chr7_1:39769869-39769888 | Msa1018920:intron | 20.0% |
!! | ATTAGAATACGAAATATAAG+TGG | + | chr7_1:39770180-39770199 | None:intergenic | 20.0% |
!! | TCGTATTCTAATATTCAATT+TGG | - | chr7_1:39770188-39770207 | Msa1018920:intron | 20.0% |
!!! | GAATATTGTTTCTTTAAGTT+TGG | - | chr7_1:39770349-39770368 | Msa1018920:intron | 20.0% |
!!! | ATATTTTTTGTTTTACCTGT+GGG | + | chr7_1:39770452-39770471 | None:intergenic | 20.0% |
!! | GTAAAACAAAAAATATGAGA+TGG | - | chr7_1:39770456-39770475 | Msa1018920:intron | 20.0% |
!! | AATGTTATTGTATGAAAACT+CGG | + | chr7_1:39770767-39770786 | None:intergenic | 20.0% |
!!! | TTTTCAGATAAATTGCTTAT+AGG | + | chr7_1:39771452-39771471 | None:intergenic | 20.0% |
!! | TAAGCAATTTATCTGAAAAA+AGG | - | chr7_1:39771453-39771472 | Msa1018920:CDS | 20.0% |
!! | AAGCAATTTATCTGAAAAAA+GGG | - | chr7_1:39771454-39771473 | Msa1018920:CDS | 20.0% |
!! | TTAAAATCCTTATTACAAAG+AGG | + | chr7_1:39771667-39771686 | None:intergenic | 20.0% |
!!! | TTTTTTTTTTCCAAACATGA+TGG | - | chr7_1:39771732-39771751 | Msa1018920:intron | 20.0% |
!! | TTAAAATGGAAATTTAAAGG+GGG | + | chr7_1:39771807-39771826 | None:intergenic | 20.0% |
!! | GTTAAAATGGAAATTTAAAG+GGG | + | chr7_1:39771808-39771827 | None:intergenic | 20.0% |
!! | GGTTAAAATGGAAATTTAAA+GGG | + | chr7_1:39771809-39771828 | None:intergenic | 20.0% |
!! | TGGTTAAAATGGAAATTTAA+AGG | + | chr7_1:39771810-39771829 | None:intergenic | 20.0% |
!! | AAATAATACACACCTAAATT+GGG | + | chr7_1:39772179-39772198 | None:intergenic | 20.0% |
!! | TAAATATATTAACACATAGC+CGG | + | chr7_1:39772234-39772253 | None:intergenic | 20.0% |
!! | GTGCATTATAAAATAGTATA+AGG | - | chr7_1:39772913-39772932 | Msa1018920:intron | 20.0% |
!! | AAAATTGTCAAGAATATAAC+GGG | + | chr7_1:39772994-39773013 | None:intergenic | 20.0% |
!! | GAAAATTGTCAAGAATATAA+CGG | + | chr7_1:39772995-39773014 | None:intergenic | 20.0% |
!!! | TGTTTTTGTTTTTTGAAGAA+CGG | - | chr7_1:39773149-39773168 | Msa1018920:intron | 20.0% |
!! | CATAATATATGCAAAATTCA+AGG | + | chr7_1:39773499-39773518 | None:intergenic | 20.0% |
!! | ATCAAATGTATATAGTATTC+AGG | + | chr7_1:39773626-39773645 | None:intergenic | 20.0% |
!! | CATTATCCATCTATAATATT+AGG | - | chr7_1:39773851-39773870 | Msa1018920:intron | 20.0% |
!! | AAATGACCTAATATTATAGA+TGG | + | chr7_1:39773860-39773879 | None:intergenic | 20.0% |
!! | ATGAAATATAATTAAAAGGG+TGG | - | chr7_1:39774406-39774425 | Msa1018920:CDS | 20.0% |
! | TATAATATTTACAACAGCAG+CGG | - | chr7_1:39768146-39768165 | Msa1018920:intron | 25.0% |
!! | TTCAATCTTTTCAACATGTT+GGG | + | chr7_1:39768186-39768205 | None:intergenic | 25.0% |
!!! | AAATCTCAAGTAATTTGCTT+TGG | + | chr7_1:39768899-39768918 | None:intergenic | 25.0% |
!! | CGTATTAGTTTCTTTCTTTA+TGG | - | chr7_1:39768990-39769009 | Msa1018920:intron | 25.0% |
! | TCAACTAAGAAATTAACTCT+AGG | + | chr7_1:39769047-39769066 | None:intergenic | 25.0% |
! | AGTATCTGATAAATAAGCTT+CGG | - | chr7_1:39769423-39769442 | Msa1018920:intron | 25.0% |
!!! | ATATCATTGACATTGACTTA+TGG | + | chr7_1:39769516-39769535 | None:intergenic | 25.0% |
!! | AAGATTGAACAAAAGTACAA+AGG | + | chr7_1:39769586-39769605 | None:intergenic | 25.0% |
!! | AAAAAAGCCACATCTTTTAT+GGG | - | chr7_1:39769656-39769675 | Msa1018920:intron | 25.0% |
! | GTGTAATTAGTGTTAGAATT+TGG | - | chr7_1:39769826-39769845 | Msa1018920:intron | 25.0% |
!! | GATTTTGCAAATATTGAGTT+AGG | + | chr7_1:39769858-39769877 | None:intergenic | 25.0% |
! | AAAGTCAGTCCAATATTAAT+CGG | + | chr7_1:39770026-39770045 | None:intergenic | 25.0% |
!!! | CTAATATTCAATTTGGCTTT+AGG | - | chr7_1:39770195-39770214 | Msa1018920:intron | 25.0% |
!! | TTTAGGTTCATTTAATGGAA+GGG | - | chr7_1:39770212-39770231 | Msa1018920:intron | 25.0% |
!!! | CATATTTTTTGTTTTACCTG+TGG | + | chr7_1:39770453-39770472 | None:intergenic | 25.0% |
! | CGAAAAAAAAAAGGAAAAAG+GGG | + | chr7_1:39770532-39770551 | None:intergenic | 25.0% |
! | GCGAAAAAAAAAAGGAAAAA+GGG | + | chr7_1:39770533-39770552 | None:intergenic | 25.0% |
! | AGCGAAAAAAAAAAGGAAAA+AGG | + | chr7_1:39770534-39770553 | None:intergenic | 25.0% |
!! | GAGTTTTCATACAATAACAT+TGG | - | chr7_1:39770766-39770785 | Msa1018920:intron | 25.0% |
!!! | TCATTGAAATTTTTCAGAGA+CGG | - | chr7_1:39771408-39771427 | Msa1018920:CDS | 25.0% |
!!! | AATTTCCATTTTAACCATGT+AGG | - | chr7_1:39771813-39771832 | Msa1018920:intron | 25.0% |
!!! | ATTTCCATTTTAACCATGTA+GGG | - | chr7_1:39771814-39771833 | Msa1018920:intron | 25.0% |
! | AATATAATCGATATGGATGA+CGG | + | chr7_1:39772027-39772046 | None:intergenic | 25.0% |
!! | TAGTTTGTGTTTATAGTTAC+TGG | - | chr7_1:39772132-39772151 | Msa1018920:intron | 25.0% |
! | AGTTTGTGTTTATAGTTACT+GGG | - | chr7_1:39772133-39772152 | Msa1018920:intron | 25.0% |
! | CAAATAATACACACCTAAAT+TGG | + | chr7_1:39772180-39772199 | None:intergenic | 25.0% |
!!! | GTTGGTTTTGTTGTTAAAAT+GGG | - | chr7_1:39772291-39772310 | Msa1018920:CDS | 25.0% |
!! | TTGGTATTTGCTAATTTAAC+AGG | - | chr7_1:39772528-39772547 | Msa1018920:intron | 25.0% |
! | AGTGAAAAGGAAAATTGAAT+AGG | + | chr7_1:39772725-39772744 | None:intergenic | 25.0% |
! | ATTCTTAGAGAGCTATTATA+TGG | - | chr7_1:39772839-39772858 | Msa1018920:intron | 25.0% |
!! | ATACTGAAGTTGTTATTGAA+TGG | - | chr7_1:39773411-39773430 | Msa1018920:intron | 25.0% |
!!! | ATATACATATTGGCCATTTT+GGG | + | chr7_1:39773732-39773751 | None:intergenic | 25.0% |
!! | AATATACATATTGGCCATTT+TGG | + | chr7_1:39773733-39773752 | None:intergenic | 25.0% |
! | AATATTAGGTCATTTGTTTG+AGG | - | chr7_1:39773865-39773884 | Msa1018920:intron | 25.0% |
! | CTAATATAAAGATATGAGTG+AGG | - | chr7_1:39773899-39773918 | Msa1018920:intron | 25.0% |
!!! | TTGCAAGAATCTTTTAGTTA+AGG | - | chr7_1:39773947-39773966 | Msa1018920:intron | 25.0% |
! | GGAAGTAAAAAGTAAGTAAA+AGG | - | chr7_1:39773968-39773987 | Msa1018920:intron | 25.0% |
! | AATATGTATGAAATTTAGGG+TGG | - | chr7_1:39771367-39771386 | Msa1018920:CDS | 25.0% |
!!! | TCAATGATATTTTTCAGAGA+CGG | - | chr7_1:39774075-39774094 | Msa1018920:intron | 25.0% |
! | GATAAATTGTTTATAGGCAA+TGG | + | chr7_1:39774113-39774132 | None:intergenic | 25.0% |
!!! | ACATTTTTGGTCTAAAACTA+TGG | - | chr7_1:39774463-39774482 | Msa1018920:CDS | 25.0% |
! | GTTCAATCTTTTCAACATGT+TGG | + | chr7_1:39768187-39768206 | None:intergenic | 30.0% |
CATGTTGAAAAGATTGAACT+TGG | - | chr7_1:39768188-39768207 | Msa1018920:intron | 30.0% | |
AAGTTTGGTATCAACAACAA+AGG | - | chr7_1:39768223-39768242 | Msa1018920:intron | 30.0% | |
TAGAAAAAGTTTAGACGAGT+TGG | - | chr7_1:39768637-39768656 | Msa1018920:intron | 30.0% | |
! | TTGCATGATGTCTTATTGAA+TGG | - | chr7_1:39768872-39768891 | Msa1018920:intron | 30.0% |
! | TGCATGATGTCTTATTGAAT+GGG | - | chr7_1:39768873-39768892 | Msa1018920:intron | 30.0% |
TATATCCCTTCATTGATGTT+TGG | - | chr7_1:39768932-39768951 | Msa1018920:intron | 30.0% | |
GATTTCCAAACATCAATGAA+GGG | + | chr7_1:39768940-39768959 | None:intergenic | 30.0% | |
TGATTTCCAAACATCAATGA+AGG | + | chr7_1:39768941-39768960 | None:intergenic | 30.0% | |
! | AAAATATTGCGACACTTTTG+AGG | - | chr7_1:39769192-39769211 | Msa1018920:intron | 30.0% |
! | AAATATTGCGACACTTTTGA+GGG | - | chr7_1:39769193-39769212 | Msa1018920:intron | 30.0% |
!! | TTATTTTACGCCAAGTCAAA+AGG | + | chr7_1:39769232-39769251 | None:intergenic | 30.0% |
TTGTTGCAGGTAAAGAAAAA+TGG | - | chr7_1:39769362-39769381 | Msa1018920:intron | 30.0% | |
GTATCTGATAAATAAGCTTC+GGG | - | chr7_1:39769424-39769443 | Msa1018920:intron | 30.0% | |
AAATCAACTCAGAAAAGATG+TGG | + | chr7_1:39769631-39769650 | None:intergenic | 30.0% | |
!!! | CATAAAAGATGTGGCTTTTT+TGG | + | chr7_1:39769657-39769676 | None:intergenic | 30.0% |
! | CAAAAAAGCCACATCTTTTA+TGG | - | chr7_1:39769655-39769674 | Msa1018920:intron | 30.0% |
ATTCATTCCCATAAAAGATG+TGG | + | chr7_1:39769666-39769685 | None:intergenic | 30.0% | |
! | TCTCCATTACTAGATTTTTG+CGG | + | chr7_1:39769778-39769797 | None:intergenic | 30.0% |
! | CAAAAATCTAGTAATGGAGA+AGG | - | chr7_1:39769778-39769797 | Msa1018920:intron | 30.0% |
!!! | GGAGAAGGTTTTAATTTTCA+TGG | - | chr7_1:39769793-39769812 | Msa1018920:intron | 30.0% |
AAAGATGGACCGATTAATAT+TGG | - | chr7_1:39770014-39770033 | Msa1018920:intron | 30.0% | |
!! | CTTTACAAGCTGATTTTGTA+AGG | + | chr7_1:39770053-39770072 | None:intergenic | 30.0% |
CTTACAAAATCAGCTTGTAA+AGG | - | chr7_1:39770051-39770070 | Msa1018920:CDS | 30.0% | |
!! | TTGGCTTTAGGTTCATTTAA+TGG | - | chr7_1:39770207-39770226 | Msa1018920:intron | 30.0% |
! | CTTTAGGTTCATTTAATGGA+AGG | - | chr7_1:39770211-39770230 | Msa1018920:intron | 30.0% |
!! | GATTTGTTGATAACATACCT+TGG | + | chr7_1:39770265-39770284 | None:intergenic | 30.0% |
! | TTCTTTAAGTTTGGTATGCA+AGG | - | chr7_1:39770358-39770377 | Msa1018920:intron | 30.0% |
TTTCATACAATAACATTGGC+AGG | - | chr7_1:39770770-39770789 | Msa1018920:intron | 30.0% | |
! | GAAACTTTGTTTCCACATTT+AGG | + | chr7_1:39771011-39771030 | None:intergenic | 30.0% |
GAAGATATAATCATTTCCGT+TGG | + | chr7_1:39771267-39771286 | None:intergenic | 30.0% | |
GATAAATTGCTTATAGGCAA+TGG | + | chr7_1:39771446-39771465 | None:intergenic | 30.0% | |
GTTTCAAGATTTATCAACCA+TGG | - | chr7_1:39771533-39771552 | Msa1018920:intron | 30.0% | |
AGGTATTCCTCTTTGTAATA+AGG | - | chr7_1:39771657-39771676 | Msa1018920:CDS | 30.0% | |
TTTACCCTACATGGTTAAAA+TGG | + | chr7_1:39771821-39771840 | None:intergenic | 30.0% | |
TGGATCTAACAACTTTATGT+TGG | + | chr7_1:39771890-39771909 | None:intergenic | 30.0% | |
! | TTCTAACACTTGCTTTGTTA+CGG | + | chr7_1:39771925-39771944 | None:intergenic | 30.0% |
AATAACAGTATTAAGACGGT+AGG | - | chr7_1:39772264-39772283 | Msa1018920:CDS | 30.0% | |
!!! | GGTTGGTTTTGTTGTTAAAA+TGG | - | chr7_1:39772290-39772309 | Msa1018920:CDS | 30.0% |
AGGACTCTTGAGATATAAAA+TGG | - | chr7_1:39772337-39772356 | Msa1018920:intron | 30.0% | |
GGACTCTTGAGATATAAAAT+GGG | - | chr7_1:39772338-39772357 | Msa1018920:intron | 30.0% | |
ACCATGAAGTAAGTCAATAA+GGG | + | chr7_1:39772491-39772510 | None:intergenic | 30.0% | |
TACCATGAAGTAAGTCAATA+AGG | + | chr7_1:39772492-39772511 | None:intergenic | 30.0% | |
! | TTTCCTTTTCACTTTCCATT+AGG | - | chr7_1:39772732-39772751 | Msa1018920:intron | 30.0% |
! | ATTTTTGCGCAATATGTATC+AGG | + | chr7_1:39772775-39772794 | None:intergenic | 30.0% |
GTGACAAAAACAATGTCATT+TGG | - | chr7_1:39772804-39772823 | Msa1018920:intron | 30.0% | |
! | AGCTCTCTAAGAATTATCAT+AGG | + | chr7_1:39772833-39772852 | None:intergenic | 30.0% |
ACACGAAATTCAATAACACT+TGG | - | chr7_1:39773032-39773051 | Msa1018920:intron | 30.0% | |
TTTGAAGAACGGTTTAAACA+TGG | - | chr7_1:39773160-39773179 | Msa1018920:intron | 30.0% | |
! | CTCAACACAACGAATTTTAT+CGG | - | chr7_1:39773256-39773275 | Msa1018920:CDS | 30.0% |
!!! | ATGGTTTTTTTTATGGTGTC+CGG | - | chr7_1:39773465-39773484 | Msa1018920:CDS | 30.0% |
ACTATATAGCTCAATTGGTA+AGG | + | chr7_1:39773528-39773547 | None:intergenic | 30.0% | |
TAAGCACTATATAGCTCAAT+TGG | + | chr7_1:39773533-39773552 | None:intergenic | 30.0% | |
!! | TATACATATTGGCCATTTTG+GGG | + | chr7_1:39773731-39773750 | None:intergenic | 30.0% |
TGAAAAAAGGGACAAGTTAA+TGG | - | chr7_1:39774133-39774152 | Msa1018920:intron | 30.0% | |
GTTTCAAGATTTATCAACCA+TGG | - | chr7_1:39771533-39771552 | Msa1018920:intron | 30.0% | |
AATATCCGTATTACCTGATA+GGG | + | chr7_1:39774320-39774339 | None:intergenic | 30.0% | |
TAATATCCGTATTACCTGAT+AGG | + | chr7_1:39774321-39774340 | None:intergenic | 30.0% | |
! | ACTCTACACTACAACATTTT+TGG | - | chr7_1:39774450-39774469 | Msa1018920:CDS | 30.0% |
!! | AACAACGGTTTTATCAACTA+TGG | + | chr7_1:39774502-39774521 | None:intergenic | 30.0% |
!! | AAAACCGTTGTTTTACCTTT+CGG | - | chr7_1:39774510-39774529 | Msa1018920:CDS | 30.0% |
! | CTCATTTTCAGAACTCTTAG+TGG | + | chr7_1:39768069-39768088 | None:intergenic | 35.0% |
!! | CACTAAGAGTTCTGAAAATG+AGG | - | chr7_1:39768067-39768086 | Msa1018920:CDS | 35.0% |
! | TTCTGAAAATGAGGCTATGA+TGG | - | chr7_1:39768076-39768095 | Msa1018920:CDS | 35.0% |
GATTGAACTTGGAAGTAAAG+AGG | - | chr7_1:39768199-39768218 | Msa1018920:intron | 35.0% | |
TGGAAGTAAAGAGGAAAGTT+TGG | - | chr7_1:39768208-39768227 | Msa1018920:intron | 35.0% | |
GTTTGCTCACAACTTCAAAA+TGG | - | chr7_1:39768245-39768264 | Msa1018920:intron | 35.0% | |
GATGATATTTCCCATAAGAG+AGG | - | chr7_1:39768281-39768300 | Msa1018920:intron | 35.0% | |
TATTTCCCATAAGAGAGGTA+TGG | - | chr7_1:39768286-39768305 | Msa1018920:intron | 35.0% | |
! | TGTCATTCAAGTTCAAGAAG+TGG | - | chr7_1:39768374-39768393 | Msa1018920:CDS | 35.0% |
!! | TCTTTGATGGACTTGACTTT+AGG | - | chr7_1:39768423-39768442 | Msa1018920:CDS | 35.0% |
!! | CTTTGATGGACTTGACTTTA+GGG | - | chr7_1:39768424-39768443 | Msa1018920:CDS | 35.0% |
!! | TTTGATGGACTTGACTTTAG+GGG | - | chr7_1:39768425-39768444 | Msa1018920:CDS | 35.0% |
AGAATGTGTGACAATTTCCA+TGG | + | chr7_1:39768680-39768699 | None:intergenic | 35.0% | |
AAGATAGTATCATGAGGCTA+GGG | + | chr7_1:39769321-39769340 | None:intergenic | 35.0% | |
TAAGATAGTATCATGAGGCT+AGG | + | chr7_1:39769322-39769341 | None:intergenic | 35.0% | |
! | GCTAACTTTCATTTTGTTGC+AGG | - | chr7_1:39769349-39769368 | Msa1018920:intron | 35.0% |
!! | ATTGATAACGAATACGTTCC+TGG | - | chr7_1:39769386-39769405 | Msa1018920:intron | 35.0% |
TGCTAAAGTGGGAACATATA+AGG | - | chr7_1:39769451-39769470 | Msa1018920:intron | 35.0% | |
TCACCGCAAAAATCTAGTAA+TGG | - | chr7_1:39769772-39769791 | Msa1018920:intron | 35.0% | |
TTGAAGGATAAGACCTCATA+TGG | + | chr7_1:39769919-39769938 | None:intergenic | 35.0% | |
GGTTAAGAATCTCAGATTGA+AGG | + | chr7_1:39769935-39769954 | None:intergenic | 35.0% | |
ACACTTTAAATGTCCAGACA+TGG | + | chr7_1:39769971-39769990 | None:intergenic | 35.0% | |
! | TTTTATCAGGTTTCGGCTAT+CGG | + | chr7_1:39769997-39770016 | None:intergenic | 35.0% |
! | GTCCATCTTTTATCAGGTTT+CGG | + | chr7_1:39770004-39770023 | None:intergenic | 35.0% |
! | TAATCGGTCCATCTTTTATC+AGG | + | chr7_1:39770010-39770029 | None:intergenic | 35.0% |
! | AAGAGATAAAGCCTTGTCAT+GGG | + | chr7_1:39770100-39770119 | None:intergenic | 35.0% |
AAACTCTTTCTTCTTCTCCA+AGG | - | chr7_1:39770245-39770264 | Msa1018920:intron | 35.0% | |
TGGAGGATCATCAAAATCAT+TGG | + | chr7_1:39770423-39770442 | None:intergenic | 35.0% | |
! | AAGGAAAAAGGGGCATATAT+TGG | + | chr7_1:39770522-39770541 | None:intergenic | 35.0% |
AGCATGCAGCGAAAAAAAAA+AGG | + | chr7_1:39770541-39770560 | None:intergenic | 35.0% | |
!! | TTTTCGCTGCATGCTTTATT+TGG | - | chr7_1:39770546-39770565 | Msa1018920:intron | 35.0% |
!! | GGCAGGTATTGTTTTACTTT+TGG | - | chr7_1:39770787-39770806 | Msa1018920:intron | 35.0% |
TGGAAACAAAGTTTCTCAAC+AGG | - | chr7_1:39771016-39771035 | Msa1018920:intron | 35.0% | |
GGAAACAAAGTTTCTCAACA+GGG | - | chr7_1:39771017-39771036 | Msa1018920:intron | 35.0% | |
ATTGTAGAATGACCTCAAGT+CGG | + | chr7_1:39771052-39771071 | None:intergenic | 35.0% | |
AAACTACCTTTCTCTTACAC+AGG | - | chr7_1:39771127-39771146 | Msa1018920:CDS | 35.0% | |
GATAAACCTGTGTAAGAGAA+AGG | + | chr7_1:39771136-39771155 | None:intergenic | 35.0% | |
GATTGTTTGCACACAATCAA+TGG | - | chr7_1:39771293-39771312 | Msa1018920:intron | 35.0% | |
!! | TGAAATTTTTCAGAGACGGT+TGG | - | chr7_1:39771412-39771431 | Msa1018920:CDS | 35.0% |
!! | GAAATTTTTCAGAGACGGTT+GGG | - | chr7_1:39771413-39771432 | Msa1018920:CDS | 35.0% |
TGAAAAAAGGGACGAGTTAA+TGG | - | chr7_1:39771466-39771485 | Msa1018920:CDS | 35.0% | |
ACACATTGTACAAAGAGGTT+TGG | + | chr7_1:39771566-39771585 | None:intergenic | 35.0% | |
TGAGAACACATTGTACAAAG+AGG | + | chr7_1:39771571-39771590 | None:intergenic | 35.0% | |
ACAAAGAGGAATACCTGATA+GGG | + | chr7_1:39771653-39771672 | None:intergenic | 35.0% | |
TACAAAGAGGAATACCTGAT+AGG | + | chr7_1:39771654-39771673 | None:intergenic | 35.0% | |
CAATAACACACCATCATGTT+TGG | + | chr7_1:39771745-39771764 | None:intergenic | 35.0% | |
! | CAAACATGATGGTGTGTTAT+TGG | - | chr7_1:39771743-39771762 | Msa1018920:intron | 35.0% |
!!! | GATGGTGTGTTATTGGTTTT+AGG | - | chr7_1:39771750-39771769 | Msa1018920:intron | 35.0% |
AAATGGAAATTTAAAGGGGG+AGG | + | chr7_1:39771804-39771823 | None:intergenic | 35.0% | |
ATGTTGGACGCATTTCAAAA+AGG | + | chr7_1:39771874-39771893 | None:intergenic | 35.0% | |
! | TCTAACACTTGCTTTGTTAC+GGG | + | chr7_1:39771924-39771943 | None:intergenic | 35.0% |
TGAAATAGACCTTGTATCGA+CGG | - | chr7_1:39771995-39772014 | Msa1018920:CDS | 35.0% | |
ATGAAGTAAGTCAATAAGGG+AGG | + | chr7_1:39772488-39772507 | None:intergenic | 35.0% | |
!! | TCCCTTATTGACTTACTTCA+TGG | - | chr7_1:39772487-39772506 | Msa1018920:intron | 35.0% |
AAACAGCTTCAATGTCATTG+TGG | - | chr7_1:39772610-39772629 | Msa1018920:intron | 35.0% | |
AATTGAATAGGCTCACACAT+TGG | + | chr7_1:39772713-39772732 | None:intergenic | 35.0% | |
!! | TTGGTTCGAGAGTTTTTGAA+GGG | - | chr7_1:39773051-39773070 | Msa1018920:intron | 35.0% |
! | ACACAACGAATTTTATCGGA+AGG | - | chr7_1:39773260-39773279 | Msa1018920:CDS | 35.0% |
! | GTACCTTTTCCATTTCATCA+GGG | + | chr7_1:39773369-39773388 | None:intergenic | 35.0% |
! | AGTACCTTTTCCATTTCATC+AGG | + | chr7_1:39773370-39773389 | None:intergenic | 35.0% |
!!! | TGGTTTTTTTTATGGTGTCC+GGG | - | chr7_1:39773466-39773485 | Msa1018920:CDS | 35.0% |
!! | TGATATTTTTCAGAGACGGT+TGG | - | chr7_1:39774079-39774098 | Msa1018920:intron | 35.0% |
!! | GATATTTTTCAGAGACGGTT+GGG | - | chr7_1:39774080-39774099 | Msa1018920:intron | 35.0% |
ACACATTGTACAAAGAGGTT+TGG | + | chr7_1:39771566-39771585 | None:intergenic | 35.0% | |
TGAGAACACATTGTACAAAG+AGG | + | chr7_1:39771571-39771590 | None:intergenic | 35.0% | |
ATTGCCGAAAGGTAAAACAA+CGG | + | chr7_1:39774517-39774536 | None:intergenic | 35.0% | |
! | GTTGTCGTTTCATTTGACAA+CGG | - | chr7_1:39774564-39774583 | Msa1018920:CDS | 35.0% |
AGTCTTGAACTCACTCTTGT+TGG | + | chr7_1:39768104-39768123 | None:intergenic | 40.0% | |
ACTGACCATACCTCTCTTAT+GGG | + | chr7_1:39768294-39768313 | None:intergenic | 40.0% | |
AACTGACCATACCTCTCTTA+TGG | + | chr7_1:39768295-39768314 | None:intergenic | 40.0% | |
TCTTCTCAAAGAGTTGAGCT+TGG | + | chr7_1:39768345-39768364 | None:intergenic | 40.0% | |
AGTCCATCAAAGACGAACAT+TGG | + | chr7_1:39768416-39768435 | None:intergenic | 40.0% | |
TGTCCTTGAGAGAAACATCT+AGG | - | chr7_1:39768453-39768472 | Msa1018920:CDS | 40.0% | |
AAGCCTAGATGTTTCTCTCA+AGG | + | chr7_1:39768459-39768478 | None:intergenic | 40.0% | |
TTGTATCACACACCTTAGCA+AGG | + | chr7_1:39768496-39768515 | None:intergenic | 40.0% | |
!! | CGAGTTGGATTTCAGACTTT+TGG | - | chr7_1:39768652-39768671 | Msa1018920:intron | 40.0% |
!!! | ATTTCAGACTTTTGGAGCCA+TGG | - | chr7_1:39768660-39768679 | Msa1018920:intron | 40.0% |
GTAACAACTTCATTTGCAGC+AGG | - | chr7_1:39769130-39769149 | Msa1018920:intron | 40.0% | |
AGCAAGAATCGACACAAGAT+AGG | - | chr7_1:39769167-39769186 | Msa1018920:intron | 40.0% | |
GCAAGAATCGACACAAGATA+GGG | - | chr7_1:39769168-39769187 | Msa1018920:intron | 40.0% | |
TACTTCGAAGTAGTGATTCC+AGG | + | chr7_1:39769407-39769426 | None:intergenic | 40.0% | |
! | CATGATAGTGCGATGTTACA+TGG | - | chr7_1:39769727-39769746 | Msa1018920:intron | 40.0% |
CTCACTTGTATAGCCATATG+AGG | - | chr7_1:39769903-39769922 | Msa1018920:intron | 40.0% | |
TTTATCAGGTTTCGGCTATC+GGG | + | chr7_1:39769996-39770015 | None:intergenic | 40.0% | |
AGCCGAAACCTGATAAAAGA+TGG | - | chr7_1:39769999-39770018 | Msa1018920:intron | 40.0% | |
AAAATCAGCTTGTAAAGGCG+AGG | - | chr7_1:39770056-39770075 | Msa1018920:CDS | 40.0% | |
TGTCATGGGTTTATAGGTGA+GGG | + | chr7_1:39770086-39770105 | None:intergenic | 40.0% | |
TTGTCATGGGTTTATAGGTG+AGG | + | chr7_1:39770087-39770106 | None:intergenic | 40.0% | |
TCACCTATAAACCCATGACA+AGG | - | chr7_1:39770086-39770105 | Msa1018920:CDS | 40.0% | |
! | AAGCCTTGTCATGGGTTTAT+AGG | + | chr7_1:39770092-39770111 | None:intergenic | 40.0% |
! | GAAGAGATAAAGCCTTGTCA+TGG | + | chr7_1:39770101-39770120 | None:intergenic | 40.0% |
GTATGCAAGGACATTAGCAA+TGG | - | chr7_1:39770371-39770390 | Msa1018920:intron | 40.0% | |
CTAGATGGAACTTCAATGCT+TGG | + | chr7_1:39770676-39770695 | None:intergenic | 40.0% | |
TGTCCTTGTGCTAGTCATAA+TGG | - | chr7_1:39770739-39770758 | Msa1018920:intron | 40.0% | |
GTTTATCGTACTCCCAAGAA+AGG | - | chr7_1:39771149-39771168 | Msa1018920:CDS | 40.0% | |
ACACCAATATACTCGACAAC+TGG | + | chr7_1:39771215-39771234 | None:intergenic | 40.0% | |
CACACAATCAATGGTGTAGA+TGG | - | chr7_1:39771302-39771321 | Msa1018920:intron | 40.0% | |
CCAGCATCTATGCAATATTC+AGG | + | chr7_1:39771500-39771519 | None:intergenic | 40.0% | |
CCTGAATATTGCATAGATGC+TGG | - | chr7_1:39771497-39771516 | Msa1018920:CDS | 40.0% | |
!!! | TGCATAGATGCTGGTTCTTT+TGG | - | chr7_1:39771506-39771525 | Msa1018920:CDS | 40.0% |
!!! | CTCACTGTTTTTACCCTACA+TGG | + | chr7_1:39771830-39771849 | None:intergenic | 40.0% |
! | TAACACTTGCTTTGTTACGG+GGG | + | chr7_1:39771922-39771941 | None:intergenic | 40.0% |
! | CTAACACTTGCTTTGTTACG+GGG | + | chr7_1:39771923-39771942 | None:intergenic | 40.0% |
!! | TCCTTAAGGGTGGTTGTTTT+TGG | - | chr7_1:39772072-39772091 | Msa1018920:intron | 40.0% |
!!! | CCTTAAGGGTGGTTGTTTTT+GGG | - | chr7_1:39772073-39772092 | Msa1018920:intron | 40.0% |
! | AATTGGGCACCGTATAAAGA+CGG | + | chr7_1:39772163-39772182 | None:intergenic | 40.0% |
CTTTATACGGTGCCCAATTT+AGG | - | chr7_1:39772164-39772183 | Msa1018920:intron | 40.0% | |
!!! | TTGTTACCATCGCTAGCTTT+TGG | - | chr7_1:39772197-39772216 | Msa1018920:intron | 40.0% |
CAGTATTAAGACGGTAGGTA+TGG | - | chr7_1:39772269-39772288 | Msa1018920:CDS | 40.0% | |
ATTAAGACGGTAGGTATGGT+TGG | - | chr7_1:39772273-39772292 | Msa1018920:CDS | 40.0% | |
TTCCATGTCATCTTCTGAAC+TGG | - | chr7_1:39772413-39772432 | Msa1018920:CDS | 40.0% | |
AACCAGTTCAGAAGATGACA+TGG | + | chr7_1:39772418-39772437 | None:intergenic | 40.0% | |
GAGTGTGTAACCATAGTCAT+AGG | + | chr7_1:39772560-39772579 | None:intergenic | 40.0% | |
GATAGTGTGTCTGATTCTGA+TGG | - | chr7_1:39772580-39772599 | Msa1018920:intron | 40.0% | |
TCAATGTCATTGTGGTGCAA+AGG | - | chr7_1:39772618-39772637 | Msa1018920:intron | 40.0% | |
GTGCCTAATGGAAAGTGAAA+AGG | + | chr7_1:39772738-39772757 | None:intergenic | 40.0% | |
TCACTTTCCATTAGGCACTT+AGG | - | chr7_1:39772740-39772759 | Msa1018920:intron | 40.0% | |
CACTTTCCATTAGGCACTTA+GGG | - | chr7_1:39772741-39772760 | Msa1018920:intron | 40.0% | |
ACTTTCCATTAGGCACTTAG+GGG | - | chr7_1:39772742-39772761 | Msa1018920:intron | 40.0% | |
ACAGGGTTGTCTTGACAATT+CGG | - | chr7_1:39772964-39772983 | Msa1018920:intron | 40.0% | |
!! | CTTGGTTCGAGAGTTTTTGA+AGG | - | chr7_1:39773050-39773069 | Msa1018920:intron | 40.0% |
!! | TTCGAGAGTTTTTGAAGGGA+GGG | - | chr7_1:39773055-39773074 | Msa1018920:intron | 40.0% |
!! | TAAATTAGAGGCACTGCGAA+GGG | - | chr7_1:39773318-39773337 | Msa1018920:intron | 40.0% |
GTACCCTGATGAAATGGAAA+AGG | - | chr7_1:39773363-39773382 | Msa1018920:intron | 40.0% | |
!!! | GGTTTTTTTTATGGTGTCCG+GGG | - | chr7_1:39773467-39773486 | Msa1018920:CDS | 40.0% |
AAAATTCAAGGTTCGAACCC+CGG | + | chr7_1:39773487-39773506 | None:intergenic | 40.0% | |
!!! | ATTGGCCATTTTGGGGTTAT+GGG | + | chr7_1:39773724-39773743 | None:intergenic | 40.0% |
!!! | TATTGGCCATTTTGGGGTTA+TGG | + | chr7_1:39773725-39773744 | None:intergenic | 40.0% |
CCAGCATCTATGCAATATTC+AGG | + | chr7_1:39771500-39771519 | None:intergenic | 40.0% | |
CCTGAATATTGCATAGATGC+TGG | - | chr7_1:39771497-39771516 | Msa1018920:CDS | 40.0% | |
!!! | TGCATAGATGCTGGTTCTTT+TGG | - | chr7_1:39771506-39771525 | Msa1018920:CDS | 40.0% |
TACCTCCCTATCAGGTAATA+CGG | - | chr7_1:39774312-39774331 | Msa1018920:CDS | 40.0% | |
!! | GAAAGAAAAGCATTGCCGAA+AGG | + | chr7_1:39774528-39774547 | None:intergenic | 40.0% |
TTTCTTTCCGTGGTAGTCTA+AGG | - | chr7_1:39774540-39774559 | Msa1018920:CDS | 40.0% | |
!! | ACAACGGATTTGTTGCATAC+AGG | - | chr7_1:39774580-39774599 | Msa1018920:CDS | 40.0% |
CTTGAACTTGAATGACAGCG+AGG | + | chr7_1:39768371-39768390 | None:intergenic | 45.0% | |
CGTCCAATGTTCGTCTTTGA+TGG | - | chr7_1:39768410-39768429 | Msa1018920:CDS | 45.0% | |
CTTAGCAAGGAGACGAAGAT+TGG | + | chr7_1:39768483-39768502 | None:intergenic | 45.0% | |
CAATCTTCGTCTCCTTGCTA+AGG | - | chr7_1:39768481-39768500 | Msa1018920:CDS | 45.0% | |
!! | GCAATGTGAGCCTTTTGACT+TGG | - | chr7_1:39769219-39769238 | Msa1018920:intron | 45.0% |
!! | CTTCGGGAACTTGCTAAAGT+GGG | - | chr7_1:39769440-39769459 | Msa1018920:intron | 45.0% |
TGAAGTTCCATCTAGTGCTG+CGG | - | chr7_1:39770681-39770700 | Msa1018920:intron | 45.0% | |
ACTAGCACAAGGACATCTCT+TGG | + | chr7_1:39770734-39770753 | None:intergenic | 45.0% | |
GAGCCATTATGACTAGCACA+AGG | + | chr7_1:39770745-39770764 | None:intergenic | 45.0% | |
ATCGTACTCCCAAGAAAGGT+TGG | - | chr7_1:39771153-39771172 | Msa1018920:CDS | 45.0% | |
TCGTACTCCCAAGAAAGGTT+GGG | - | chr7_1:39771154-39771173 | Msa1018920:CDS | 45.0% | |
ACATGGGACTTTATCCCATC+AGG | - | chr7_1:39771185-39771204 | Msa1018920:CDS | 45.0% | |
GCACCAGTTGTCGAGTATAT+TGG | - | chr7_1:39771209-39771228 | Msa1018920:CDS | 45.0% | |
CTAAGTAGAGACGATGAGCT+AGG | - | chr7_1:39771236-39771255 | Msa1018920:intron | 45.0% | |
CAATGGTGTAGATGGAAGAG+AGG | - | chr7_1:39771310-39771329 | Msa1018920:intron | 45.0% | |
! | AGAGGTTTGGTTCACATCCA+TGG | + | chr7_1:39771553-39771572 | None:intergenic | 45.0% |
AGAAGACATACCTCCCTATC+AGG | - | chr7_1:39771637-39771656 | Msa1018920:CDS | 45.0% | |
AAGAGGAATACCTGATAGGG+AGG | + | chr7_1:39771650-39771669 | None:intergenic | 45.0% | |
TGTTACGGGGGAAATACATC+TGG | + | chr7_1:39771910-39771929 | None:intergenic | 45.0% | |
ACGGTGTTTCGGTTCCTTAA+GGG | - | chr7_1:39772059-39772078 | Msa1018920:intron | 45.0% | |
CCCAAAAACAACCACCCTTA+AGG | + | chr7_1:39772076-39772095 | None:intergenic | 45.0% | |
!!! | AAGGGTGGTTGTTTTTGGGT+TGG | - | chr7_1:39772077-39772096 | Msa1018920:intron | 45.0% |
!!! | GGTTGTTTTTGGGTTGGCTT+CGG | - | chr7_1:39772083-39772102 | Msa1018920:intron | 45.0% |
CTGGGTGTTCCGTCTTTATA+CGG | - | chr7_1:39772151-39772170 | Msa1018920:intron | 45.0% | |
CAGGAACTCACCTATGACTA+TGG | - | chr7_1:39772547-39772566 | Msa1018920:intron | 45.0% | |
AAGCGCTTGTACTAGTGCAA+TGG | - | chr7_1:39772649-39772668 | Msa1018920:intron | 45.0% | |
CTTTCCATTAGGCACTTAGG+GGG | - | chr7_1:39772743-39772762 | Msa1018920:intron | 45.0% | |
!! | GTTCGAGAGTTTTTGAAGGG+AGG | - | chr7_1:39773054-39773073 | Msa1018920:intron | 45.0% |
!! | AGAGTTTTTGAAGGGAGGGA+GGG | - | chr7_1:39773059-39773078 | Msa1018920:intron | 45.0% |
GCAGTGCCTCTAATTTAGAG+GGG | + | chr7_1:39773315-39773334 | None:intergenic | 45.0% | |
CGCAGTGCCTCTAATTTAGA+GGG | + | chr7_1:39773316-39773335 | None:intergenic | 45.0% | |
TCGCAGTGCCTCTAATTTAG+AGG | + | chr7_1:39773317-39773336 | None:intergenic | 45.0% | |
!! | CTAAATTAGAGGCACTGCGA+AGG | - | chr7_1:39773317-39773336 | Msa1018920:intron | 45.0% |
TTTCATCAGGGTACACCTTG+TGG | + | chr7_1:39773357-39773376 | None:intergenic | 45.0% | |
CAAGGTGTACCCTGATGAAA+TGG | - | chr7_1:39773357-39773376 | Msa1018920:intron | 45.0% | |
CTCTTCCCATAACCCCAAAA+TGG | - | chr7_1:39773716-39773735 | Msa1018920:intron | 45.0% | |
! | AGAGGTTTGGTTCACATCCA+TGG | + | chr7_1:39771553-39771572 | None:intergenic | 45.0% |
ATGTGACATACCTCCCTATC+AGG | - | chr7_1:39774304-39774323 | Msa1018920:CDS | 45.0% | |
ATCCGTATTACCTGATAGGG+AGG | + | chr7_1:39774317-39774336 | None:intergenic | 45.0% | |
!!! | ATAAAATTGTTTTTATATTT+TGG | - | chr7_1:39773587-39773606 | Msa1018920:intron | 5.0% |
!! | GCTTCGGGAACTTGCTAAAG+TGG | - | chr7_1:39769439-39769458 | Msa1018920:intron | 50.0% |
! | GTTTTACCTGTGGGTGCAAC+TGG | + | chr7_1:39770443-39770462 | None:intergenic | 50.0% |
GAAGTTCCATCTAGTGCTGC+GGG | - | chr7_1:39770682-39770701 | Msa1018920:intron | 50.0% | |
CATTCGACCACGATGTCTAG+AGG | + | chr7_1:39770966-39770985 | None:intergenic | 50.0% | |
CTAGACATCGTGGTCGAATG+TGG | - | chr7_1:39770966-39770985 | Msa1018920:intron | 50.0% | |
TTAGGTCCGCATCCACATTG+CGG | + | chr7_1:39770993-39771012 | None:intergenic | 50.0% | |
TGTGGATGCGGACCTAAATG+TGG | - | chr7_1:39770996-39771015 | Msa1018920:intron | 50.0% | |
!! | GGGCTTAACTTACCGACTTG+AGG | - | chr7_1:39771037-39771056 | Msa1018920:CDS | 50.0% |
TACTCCCAAGAAAGGTTGGG+CGG | - | chr7_1:39771157-39771176 | Msa1018920:CDS | 50.0% | |
CTTACCGCCCAACCTTTCTT+GGG | + | chr7_1:39771164-39771183 | None:intergenic | 50.0% | |
TCTTACCGCCCAACCTTTCT+TGG | + | chr7_1:39771165-39771184 | None:intergenic | 50.0% | |
AAGGTTGGGCGGTAAGAACA+TGG | - | chr7_1:39771168-39771187 | Msa1018920:CDS | 50.0% | |
AGGTTGGGCGGTAAGAACAT+GGG | - | chr7_1:39771169-39771188 | Msa1018920:CDS | 50.0% | |
!! | GATGAGCTAGGAAGTGCCAA+CGG | - | chr7_1:39771248-39771267 | Msa1018920:intron | 50.0% |
! | GAGCTAGTCTAGGATCTCTG+TGG | + | chr7_1:39771598-39771617 | None:intergenic | 50.0% |
! | AGCACTACACGAGCTAGTCT+AGG | + | chr7_1:39771608-39771627 | None:intergenic | 50.0% |
! | CGGTAAGTACCGTCGATACA+AGG | + | chr7_1:39772007-39772026 | None:intergenic | 50.0% |
GTGTTTCGGTTCCTTAAGGG+TGG | - | chr7_1:39772062-39772081 | Msa1018920:intron | 50.0% | |
AGAACCCCCTAAGTGCCTAA+TGG | + | chr7_1:39772750-39772769 | None:intergenic | 50.0% | |
GGGTTGTCTTGACAATTCGG+AGG | - | chr7_1:39772967-39772986 | Msa1018920:intron | 50.0% | |
!! | GAGAGTTTTTGAAGGGAGGG+AGG | - | chr7_1:39773058-39773077 | Msa1018920:intron | 50.0% |
!! | GAGTTTTTGAAGGGAGGGAG+GGG | - | chr7_1:39773060-39773079 | Msa1018920:intron | 50.0% |
GTGAGGCCCCTCTAAATTAG+AGG | - | chr7_1:39773306-39773325 | Msa1018920:intron | 50.0% | |
GGTCTTGATGCACTTCCACA+AGG | - | chr7_1:39773339-39773358 | Msa1018920:intron | 50.0% | |
! | GAGCTAGTCTAGGATCTCTG+TGG | + | chr7_1:39771598-39771617 | None:intergenic | 50.0% |
! | AGATCCTAGACTAGCTCGTG+TGG | - | chr7_1:39771601-39771620 | Msa1018920:intron | 50.0% |
! | CGGCAATGCTTTTCTTTCCG+TGG | - | chr7_1:39774530-39774549 | Msa1018920:CDS | 50.0% |
GACAACGCCTTAGACTACCA+CGG | + | chr7_1:39774550-39774569 | None:intergenic | 50.0% | |
AGACATGGACGTGAGAGGGT+GGG | + | chr7_1:39769956-39769975 | None:intergenic | 55.0% | |
GTCCAGACATGGACGTGAGA+GGG | + | chr7_1:39769960-39769979 | None:intergenic | 55.0% | |
TGTCCAGACATGGACGTGAG+AGG | + | chr7_1:39769961-39769980 | None:intergenic | 55.0% | |
TTACCTGTGGGTGCAACTGG+AGG | + | chr7_1:39770440-39770459 | None:intergenic | 55.0% | |
TTGCATCCCGCAGCACTAGA+TGG | + | chr7_1:39770691-39770710 | None:intergenic | 55.0% | |
TGCTGCGGGATGCAATTGCA+AGG | - | chr7_1:39770696-39770715 | Msa1018920:intron | 55.0% | |
GCTGCGGGATGCAATTGCAA+GGG | - | chr7_1:39770697-39770716 | Msa1018920:intron | 55.0% | |
GATCGAGCCTCTAGACATCG+TGG | - | chr7_1:39770956-39770975 | Msa1018920:intron | 55.0% | |
GTCGAATGTGGACCGCAATG+TGG | - | chr7_1:39770978-39770997 | Msa1018920:intron | 55.0% | |
TGTGGACCGCAATGTGGATG+CGG | - | chr7_1:39770984-39771003 | Msa1018920:intron | 55.0% | |
CGACAACTGGTGCACCTGAT+GGG | + | chr7_1:39771202-39771221 | None:intergenic | 55.0% | |
TCGACAACTGGTGCACCTGA+TGG | + | chr7_1:39771203-39771222 | None:intergenic | 55.0% | |
GACGAGCCAAAAGCTAGCGA+TGG | + | chr7_1:39772206-39772225 | None:intergenic | 55.0% | |
!!! | GCTTTTGGCTCGTCTTGTGC+CGG | - | chr7_1:39772212-39772231 | Msa1018920:intron | 55.0% |
!! | TTTTTGAAGGGAGGGAGGGG+AGG | - | chr7_1:39773063-39773082 | Msa1018920:intron | 55.0% |
!! | TTTTGAAGGGAGGGAGGGGA+GGG | - | chr7_1:39773064-39773083 | Msa1018920:intron | 55.0% |
! | AGCACCACACGAGCTAGTCT+AGG | + | chr7_1:39774275-39774294 | None:intergenic | 55.0% |
CAGACATGGACGTGAGAGGG+TGG | + | chr7_1:39769957-39769976 | None:intergenic | 60.0% | |
CACCCTCTCACGTCCATGTC+TGG | - | chr7_1:39769955-39769974 | Msa1018920:intron | 60.0% | |
GATCCTCCAGTTGCACCCAC+AGG | - | chr7_1:39770434-39770453 | Msa1018920:intron | 60.0% | |
!! | GGGTTGGCTTCGGTGCTTAG+TGG | - | chr7_1:39772093-39772112 | Msa1018920:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_1 | gene | 39768059 | 39774618 | 39768059 | ID=Msa1018920;Name=Msa1018920 |
chr7_1 | mRNA | 39768059 | 39774618 | 39768059 | ID=Msa1018920-mRNA-1;Parent=Msa1018920;Name=Msa1018920-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|0.84|1|1|13|0|628 |
chr7_1 | exon | 39774175 | 39774618 | 39774175 | ID=Msa1018920-mRNA-1:exon:7722;Parent=Msa1018920-mRNA-1 |
chr7_1 | exon | 39773454 | 39773528 | 39773454 | ID=Msa1018920-mRNA-1:exon:7721;Parent=Msa1018920-mRNA-1 |
chr7_1 | exon | 39773205 | 39773306 | 39773205 | ID=Msa1018920-mRNA-1:exon:7720;Parent=Msa1018920-mRNA-1 |
chr7_1 | exon | 39772411 | 39772460 | 39772411 | ID=Msa1018920-mRNA-1:exon:7719;Parent=Msa1018920-mRNA-1 |
chr7_1 | exon | 39772222 | 39772310 | 39772222 | ID=Msa1018920-mRNA-1:exon:7718;Parent=Msa1018920-mRNA-1 |
chr7_1 | exon | 39771886 | 39772036 | 39771886 | ID=Msa1018920-mRNA-1:exon:7717;Parent=Msa1018920-mRNA-1 |
chr7_1 | exon | 39771619 | 39771724 | 39771619 | ID=Msa1018920-mRNA-1:exon:7716;Parent=Msa1018920-mRNA-1 |
chr7_1 | exon | 39771346 | 39771528 | 39771346 | ID=Msa1018920-mRNA-1:exon:7715;Parent=Msa1018920-mRNA-1 |
chr7_1 | exon | 39771019 | 39771252 | 39771019 | ID=Msa1018920-mRNA-1:exon:7714;Parent=Msa1018920-mRNA-1 |
chr7_1 | exon | 39770031 | 39770127 | 39770031 | ID=Msa1018920-mRNA-1:exon:7713;Parent=Msa1018920-mRNA-1 |
chr7_1 | exon | 39769293 | 39769351 | 39769293 | ID=Msa1018920-mRNA-1:exon:7712;Parent=Msa1018920-mRNA-1 |
chr7_1 | exon | 39768352 | 39768585 | 39768352 | ID=Msa1018920-mRNA-1:exon:7711;Parent=Msa1018920-mRNA-1 |
chr7_1 | exon | 39768059 | 39768121 | 39768059 | ID=Msa1018920-mRNA-1:exon:7710;Parent=Msa1018920-mRNA-1 |
chr7_1 | CDS | 39774175 | 39774618 | 39774175 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
chr7_1 | CDS | 39773454 | 39773528 | 39773454 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
chr7_1 | CDS | 39773205 | 39773306 | 39773205 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
chr7_1 | CDS | 39772411 | 39772460 | 39772411 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
chr7_1 | CDS | 39772222 | 39772310 | 39772222 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
chr7_1 | CDS | 39771886 | 39772036 | 39771886 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
chr7_1 | CDS | 39771619 | 39771724 | 39771619 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
chr7_1 | CDS | 39771346 | 39771528 | 39771346 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
chr7_1 | CDS | 39771019 | 39771252 | 39771019 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
chr7_1 | CDS | 39770031 | 39770127 | 39770031 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
chr7_1 | CDS | 39769293 | 39769351 | 39769293 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
chr7_1 | CDS | 39768352 | 39768585 | 39768352 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
chr7_1 | CDS | 39768059 | 39768121 | 39768059 | ID=Msa1018920-mRNA-1:cds;Parent=Msa1018920-mRNA-1 |
Gene Sequence |
Protein sequence |