Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1020570 | XP_003621577.1 | 93.123 | 349 | 17 | 2 | 1 | 344 | 1 | 347 | 0.0 | 592 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1020570 | sp|Q9CAA4|BIM2_ARATH | 39.498 | 319 | 143 | 9 | 3 | 308 | 2 | 283 | 1.44e-51 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1020570 | G7KRZ1 | 93.123 | 349 | 17 | 2 | 1 | 344 | 1 | 347 | 0.0 | 592 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1020570 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1020570 | MtrunA17_Chr7g0220371 | 93.123 | 349 | 17 | 2 | 1 | 344 | 1 | 347 | 0.0 | 592 |
| Msa1020570 | MtrunA17_Chr5g0420701 | 39.458 | 332 | 159 | 9 | 27 | 340 | 25 | 332 | 3.97e-58 | 191 |
| Msa1020570 | MtrunA17_Chr4g0061791 | 39.130 | 368 | 177 | 15 | 1 | 340 | 218 | 566 | 1.40e-49 | 174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1020570 | AT1G69010.1 | 39.498 | 319 | 143 | 9 | 3 | 308 | 2 | 283 | 1.47e-52 | 176 |
| Msa1020570 | AT5G38860.1 | 37.294 | 303 | 151 | 8 | 47 | 341 | 27 | 298 | 2.43e-49 | 167 |
| Msa1020570 | AT5G08130.3 | 35.831 | 307 | 154 | 8 | 1 | 298 | 103 | 375 | 4.38e-40 | 146 |
| Msa1020570 | AT5G08130.1 | 35.505 | 307 | 156 | 8 | 1 | 298 | 103 | 376 | 1.13e-39 | 145 |
| Msa1020570 | AT5G08130.7 | 35.831 | 307 | 154 | 8 | 1 | 298 | 223 | 495 | 3.69e-39 | 145 |
| Msa1020570 | AT5G08130.5 | 35.831 | 307 | 154 | 8 | 1 | 298 | 227 | 499 | 4.03e-39 | 145 |
| Msa1020570 | AT5G08130.8 | 35.505 | 307 | 156 | 8 | 1 | 298 | 227 | 500 | 9.71e-39 | 144 |
| Msa1020570 | AT5G08130.2 | 35.505 | 307 | 156 | 8 | 1 | 298 | 223 | 496 | 9.74e-39 | 144 |
| Msa1020570 | AT5G08130.4 | 35.505 | 307 | 156 | 8 | 1 | 298 | 223 | 496 | 9.74e-39 | 144 |
| Msa1020570 | AT5G08130.6 | 35.505 | 307 | 156 | 8 | 1 | 298 | 223 | 496 | 1.02e-38 | 144 |
| Msa1020570 | AT5G38860.2 | 42.328 | 189 | 94 | 4 | 47 | 220 | 27 | 215 | 1.89e-36 | 131 |
Find 93 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTAACTTGTGTAAGTATT+TGG | 0.142194 | 7_1:-44216151 | Msa1020570:three_prime_UTR |
| GCTTCTCTTCTGAACCTCTT+TGG | 0.254372 | 7_1:+44216397 | None:intergenic |
| TCATGTTTAAACAGAATATT+AGG | 0.257906 | 7_1:-44217725 | Msa1020570:intron |
| CATTCTCGAGCTATTCAAAA+TGG | 0.263201 | 7_1:-44219731 | Msa1020570:CDS |
| TGGAGGGGTCAGACATTATT+GGG | 0.290265 | 7_1:+44219654 | None:intergenic |
| CAACCAATTCTTCATCTTGA+TGG | 0.291614 | 7_1:+44222250 | None:intergenic |
| ATCAAGTACCTCCAATAAAA+AGG | 0.295735 | 7_1:+44221038 | None:intergenic |
| GAGCTTATTTATAACTTGTT+TGG | 0.306158 | 7_1:-44216183 | Msa1020570:three_prime_UTR |
| GTGGAGGGGTCAGACATTAT+TGG | 0.312044 | 7_1:+44219653 | None:intergenic |
| TTTGTTGAAGAAAAGGAAAA+TGG | 0.316032 | 7_1:-44222289 | Msa1020570:exon |
| TGAGTATATTCATTTCTTAC+AGG | 0.317013 | 7_1:-44220906 | Msa1020570:CDS |
| ACCCATGGAATTAATTTAGT+TGG | 0.355118 | 7_1:+44220836 | None:intergenic |
| CCTAACTTGTGTAAGTATTT+GGG | 0.362532 | 7_1:-44216150 | Msa1020570:three_prime_UTR |
| ACAATATGATTGTCCTTGTT+TGG | 0.394063 | 7_1:+44219446 | None:intergenic |
| CAAATCTCCAGCCTCAAGTA+TGG | 0.400754 | 7_1:-44219478 | Msa1020570:CDS |
| AGGCCATCAAGATGAAGAAT+TGG | 0.415929 | 7_1:-44222253 | Msa1020570:CDS |
| ATTCAAAATGGGTCTGTTGA+TGG | 0.420277 | 7_1:-44219719 | Msa1020570:CDS |
| CCCAAATACTTACACAAGTT+AGG | 0.420982 | 7_1:+44216150 | None:intergenic |
| TCCTTATGAAGGATGGAATC+AGG | 0.425736 | 7_1:-44220861 | Msa1020570:CDS |
| CCCTCAATCCCACTTTCACT+TGG | 0.428843 | 7_1:+44216307 | None:intergenic |
| CCAATCGCATTTGCATGGTC+AGG | 0.430055 | 7_1:+44219582 | None:intergenic |
| ACCTGAAGATTGTAGCGCTT+GGG | 0.439567 | 7_1:+44217694 | None:intergenic |
| GAGGATTTGAAAATTGATAG+TGG | 0.439987 | 7_1:-44219398 | Msa1020570:CDS |
| GTTGGTAGACGAACAAATAC+TGG | 0.440350 | 7_1:-44217632 | Msa1020570:CDS |
| ATTCAGAAAGGTTGCATCCC+TGG | 0.447634 | 7_1:-44219626 | Msa1020570:CDS |
| AGCCAACTAAATTAATTCCA+TGG | 0.454176 | 7_1:-44220838 | Msa1020570:CDS |
| ACCATACCACCGCTAACAAC+CGG | 0.455738 | 7_1:+44219548 | None:intergenic |
| TCCTGATTCCATCCTTCATA+AGG | 0.456798 | 7_1:+44220860 | None:intergenic |
| AGTGGGATTGAGGGTAGGTC+AGG | 0.461663 | 7_1:-44216298 | Msa1020570:three_prime_UTR |
| AACCTTTGAGCTATATTGAC+AGG | 0.466561 | 7_1:+44217601 | None:intergenic |
| CACCTGAAGATTGTAGCGCT+TGG | 0.468612 | 7_1:+44217693 | None:intergenic |
| TGGAGATTTGAAGCCATGTC+AGG | 0.468800 | 7_1:+44219491 | None:intergenic |
| ACCCAAGCGCTACAATCTTC+AGG | 0.469010 | 7_1:-44217695 | Msa1020570:CDS |
| TTGAGAGAGGAAGATGTGTT+TGG | 0.473751 | 7_1:+44222198 | None:intergenic |
| ATTTATGAACATCCTTATGA+AGG | 0.475064 | 7_1:-44220872 | Msa1020570:CDS |
| CCAAGTGAAAGTGGGATTGA+GGG | 0.482417 | 7_1:-44216307 | Msa1020570:three_prime_UTR |
| TGCTAAGCCATACTTGAGGC+TGG | 0.494117 | 7_1:+44219471 | None:intergenic |
| TGAACCCATCAGAGGGAAAA+GGG | 0.494552 | 7_1:-44221982 | Msa1020570:CDS |
| ATCAATTTCCACCGAGACAT+TGG | 0.500672 | 7_1:+44217655 | None:intergenic |
| ATGAACCCATCAGAGGGAAA+AGG | 0.501254 | 7_1:-44221983 | Msa1020570:CDS |
| ACTACTTCTGTGGATGAACC+AGG | 0.503685 | 7_1:+44219608 | None:intergenic |
| ATTCTCGAGCTATTCAAAAT+GGG | 0.508087 | 7_1:-44219730 | Msa1020570:CDS |
| GCCATGTCAGGATTAGATAC+AGG | 0.508965 | 7_1:+44219503 | None:intergenic |
| AATCAAGCAATGGCATGTTC+AGG | 0.511565 | 7_1:-44216454 | Msa1020570:CDS |
| CCTGACCATGCAAATGCGAT+TGG | 0.517967 | 7_1:-44219582 | Msa1020570:CDS |
| ATGAACATCCTTATGAAGGA+TGG | 0.522411 | 7_1:-44220868 | Msa1020570:CDS |
| GCGATTGGACATGTTTGATC+CGG | 0.526444 | 7_1:-44219567 | Msa1020570:CDS |
| TTTCCACCGAGACATTGGTC+TGG | 0.526791 | 7_1:+44217660 | None:intergenic |
| GCCAACTAAATTAATTCCAT+GGG | 0.528721 | 7_1:-44220837 | Msa1020570:intron |
| TCCGGTTGTTAGCGGTGGTA+TGG | 0.531955 | 7_1:-44219549 | Msa1020570:CDS |
| CAATCGCATTTGCATGGTCA+GGG | 0.532625 | 7_1:+44219583 | None:intergenic |
| ATGTTTGATCCGGTTGTTAG+CGG | 0.533535 | 7_1:-44219557 | Msa1020570:CDS |
| CTGAATGCTTAGAACGATGA+GGG | 0.533904 | 7_1:+44221955 | None:intergenic |
| GCCAAGTGAAAGTGGGATTG+AGG | 0.537711 | 7_1:-44216308 | Msa1020570:three_prime_UTR |
| TTGTGACTTGGCAGTGAAGG+TGG | 0.545492 | 7_1:-44222006 | Msa1020570:intron |
| GCAACCTTTCTGAATAGTTG+TGG | 0.548890 | 7_1:+44219634 | None:intergenic |
| TTCCACCGAGACATTGGTCT+GGG | 0.553185 | 7_1:+44217661 | None:intergenic |
| TCTCAAGTGCCTACTCTCAA+AGG | 0.555019 | 7_1:-44219358 | Msa1020570:intron |
| ATTATTGTTGTTGTTGAGAG+AGG | 0.566468 | 7_1:+44222185 | None:intergenic |
| ACCTTTCTGAATAGTTGTGG+AGG | 0.568104 | 7_1:+44219637 | None:intergenic |
| AAAATGGCTAGGTCTGCTAA+AGG | 0.571124 | 7_1:-44222273 | Msa1020570:CDS |
| GATGTTGAGCCAAGTGAAAG+TGG | 0.572351 | 7_1:-44216316 | Msa1020570:three_prime_UTR |
| CCTTTCTGAATAGTTGTGGA+GGG | 0.573907 | 7_1:+44219638 | None:intergenic |
| CATGTCCAATCGCATTTGCA+TGG | 0.574061 | 7_1:+44219577 | None:intergenic |
| TATGGTGACTCAACAGATGC+TGG | 0.576277 | 7_1:-44219531 | Msa1020570:CDS |
| TTTGATCCGGTTGTTAGCGG+TGG | 0.584063 | 7_1:-44219554 | Msa1020570:CDS |
| TGAAGAAAAGGAAAATGGCT+AGG | 0.598883 | 7_1:-44222284 | Msa1020570:exon |
| CCCTCCACAACTATTCAGAA+AGG | 0.598886 | 7_1:-44219638 | Msa1020570:CDS |
| ACCTTTGAGCTATATTGACA+GGG | 0.600389 | 7_1:+44217602 | None:intergenic |
| GAAGAAGTAAAATTAATGAG+AGG | 0.600769 | 7_1:-44221917 | Msa1020570:intron |
| CCCCTGTCAATATAGCTCAA+AGG | 0.601053 | 7_1:-44217603 | Msa1020570:intron |
| CTTTCTGAATAGTTGTGGAG+GGG | 0.603614 | 7_1:+44219639 | None:intergenic |
| AGGTGGATGAACCCATCAGA+GGG | 0.603757 | 7_1:-44221989 | Msa1020570:CDS |
| AACAGAACAAAATGAACATG+AGG | 0.609065 | 7_1:+44216357 | None:intergenic |
| TCTGAATGCTTAGAACGATG+AGG | 0.614104 | 7_1:+44221954 | None:intergenic |
| ATGGCTTAGCAAACCAAACA+AGG | 0.619238 | 7_1:-44219459 | Msa1020570:CDS |
| GCCTGTATCTAATCCTGACA+TGG | 0.619504 | 7_1:-44219504 | Msa1020570:CDS |
| AACAACAACAATAATAACAA+TGG | 0.621353 | 7_1:-44222177 | Msa1020570:intron |
| GTCTCGGTGGAAATTGATGT+TGG | 0.623639 | 7_1:-44217650 | Msa1020570:CDS |
| TTTGTCCCAGACCAATGTCT+CGG | 0.633388 | 7_1:-44217666 | Msa1020570:CDS |
| GGTCAGGGGAACTACTTCTG+TGG | 0.634643 | 7_1:+44219598 | None:intergenic |
| ATTTGTCAGCAATCAAGCAA+TGG | 0.639145 | 7_1:-44216464 | Msa1020570:CDS |
| GGTTTGCTAAGCCATACTTG+AGG | 0.640701 | 7_1:+44219467 | None:intergenic |
| GTGAAAGTGGGATTGAGGGT+AGG | 0.641391 | 7_1:-44216303 | Msa1020570:three_prime_UTR |
| ATGTTGAGCCAAGTGAAAGT+GGG | 0.646462 | 7_1:-44216315 | Msa1020570:three_prime_UTR |
| AAGGTGGATGAACCCATCAG+AGG | 0.649580 | 7_1:-44221990 | Msa1020570:CDS |
| AATCGCATTTGCATGGTCAG+GGG | 0.653290 | 7_1:+44219584 | None:intergenic |
| CTTTGAGCTATATTGACAGG+GGG | 0.658543 | 7_1:+44217604 | None:intergenic |
| AGGAATGAATTACTTCAGTG+AGG | 0.664514 | 7_1:-44216434 | Msa1020570:CDS |
| ATTCTGAACAAAGTCCAAAG+AGG | 0.673768 | 7_1:-44216411 | Msa1020570:CDS |
| CCTTTGAGCTATATTGACAG+GGG | 0.682925 | 7_1:+44217603 | None:intergenic |
| CTACTTCTGTGGATGAACCA+GGG | 0.695417 | 7_1:+44219609 | None:intergenic |
| GTCCCAGACCAATGTCTCGG+TGG | 0.716299 | 7_1:-44217663 | Msa1020570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTCTTGTAAATTAAAT+TGG | - | chr7_1:44217463-44217482 | Msa1020570:intron | 10.0% |
| !! | AAATTCTTGTAAATTAAATT+GGG | - | chr7_1:44217464-44217483 | Msa1020570:intron | 10.0% |
| !!! | TTTAACTGTTTTATTTTTTA+AGG | - | chr7_1:44219648-44219667 | Msa1020570:CDS | 10.0% |
| !!! | TTAACTGTTTTATTTTTTAA+GGG | - | chr7_1:44219649-44219668 | Msa1020570:CDS | 10.0% |
| !! | TTAATAGTTAATAATTAAAG+AGG | + | chr7_1:44220071-44220090 | None:intergenic | 10.0% |
| !! | AAGGTAAAATTATTTATGTT+CGG | - | chr7_1:44216846-44216865 | Msa1020570:intron | 15.0% |
| !! | AAAACAATGTTGTTAAATAA+CGG | - | chr7_1:44218077-44218096 | Msa1020570:intron | 15.0% |
| !! | ATAAAACAGTTAAAACTATT+GGG | + | chr7_1:44219642-44219661 | None:intergenic | 15.0% |
| !! | AATAAAACAGTTAAAACTAT+TGG | + | chr7_1:44219643-44219662 | None:intergenic | 15.0% |
| !!! | TTTATTTTTTAAGGGTATAT+AGG | - | chr7_1:44219657-44219676 | Msa1020570:CDS | 15.0% |
| !! | TTCATTGAAAATAAAATTTG+AGG | + | chr7_1:44221293-44221312 | None:intergenic | 15.0% |
| !! | GCAACAAAAAAAAAAAAAAT+TGG | + | chr7_1:44221940-44221959 | None:intergenic | 15.0% |
| !!! | AAATGTATATTTTATGATTC+TGG | - | chr7_1:44222197-44222216 | Msa1020570:CDS | 15.0% |
| !!! | AGAAAATTTTGTTGAAGAAA+AGG | - | chr7_1:44216144-44216163 | Msa1020570:three_prime_UTR | 20.0% |
| !! | AACAACAACAATAATAACAA+TGG | - | chr7_1:44216263-44216282 | Msa1020570:three_prime_UTR | 20.0% |
| !!! | TCATTTTCTTAGTATATGTT+TGG | - | chr7_1:44216753-44216772 | Msa1020570:intron | 20.0% |
| !!! | TAAACTTCTAGAATCAATTT+TGG | - | chr7_1:44216997-44217016 | Msa1020570:intron | 20.0% |
| !! | TATAATCTTACATATGTGTA+TGG | + | chr7_1:44217874-44217893 | None:intergenic | 20.0% |
| !! | TACACATATGTAAGATTATA+TGG | - | chr7_1:44217874-44217893 | Msa1020570:intron | 20.0% |
| !!! | CATTCAAGAATTTAATTTTG+TGG | - | chr7_1:44218522-44218541 | Msa1020570:intron | 20.0% |
| !! | CTTAAATTAACCTTTATTCT+TGG | + | chr7_1:44219975-44219994 | None:intergenic | 20.0% |
| !!! | ATGGGTCATATAATTTTTTT+TGG | + | chr7_1:44220412-44220431 | None:intergenic | 20.0% |
| !! | TATTGATAAGAAAATGTTCA+AGG | - | chr7_1:44220505-44220524 | Msa1020570:intron | 20.0% |
| !! | ATTGATAAGAAAATGTTCAA+GGG | - | chr7_1:44220506-44220525 | Msa1020570:intron | 20.0% |
| !!! | CGTATAATTTTCAAAATAAG+TGG | - | chr7_1:44220595-44220614 | Msa1020570:intron | 20.0% |
| !! | TCATGTTTAAACAGAATATT+AGG | - | chr7_1:44220715-44220734 | Msa1020570:intron | 20.0% |
| !!! | TTCTTTTATGTTTATTTGAG+AGG | - | chr7_1:44220911-44220930 | Msa1020570:CDS | 20.0% |
| !! | ACTTATATGATTATATCATG+TGG | + | chr7_1:44221113-44221132 | None:intergenic | 20.0% |
| !!! | TAAGTACTTATGTAAGTTTT+TGG | - | chr7_1:44221128-44221147 | Msa1020570:intron | 20.0% |
| !! | TTCAATAAGCTATTTGTATT+TGG | + | chr7_1:44221357-44221376 | None:intergenic | 20.0% |
| !!! | TTGGTATAAGATGATTTTTA+AGG | + | chr7_1:44221921-44221940 | None:intergenic | 20.0% |
| ! | TTTGTTGAAGAAAAGGAAAA+TGG | - | chr7_1:44216151-44216170 | Msa1020570:three_prime_UTR | 25.0% |
| ! | ATTCACAATTCCTTGATTAA+TGG | - | chr7_1:44216333-44216352 | Msa1020570:three_prime_UTR | 25.0% |
| ! | TTCACAATTCCTTGATTAAT+GGG | - | chr7_1:44216334-44216353 | Msa1020570:three_prime_UTR | 25.0% |
| ! | ATTGCAGAACACAATTAAAA+TGG | + | chr7_1:44216383-44216402 | None:intergenic | 25.0% |
| ! | GAAGAAGTAAAATTAATGAG+AGG | - | chr7_1:44216523-44216542 | Msa1020570:intron | 25.0% |
| !! | TGATTGTGTAAAATTGATTC+TGG | - | chr7_1:44216809-44216828 | Msa1020570:intron | 25.0% |
| !! | TCAAGTAGAATCAATTTTTG+AGG | - | chr7_1:44216927-44216946 | Msa1020570:intron | 25.0% |
| !! | ATAATTGATTCTGACATGTT+TGG | + | chr7_1:44216978-44216997 | None:intergenic | 25.0% |
| !! | TATTTGGTTTCACATAAAGA+GGG | + | chr7_1:44217024-44217043 | None:intergenic | 25.0% |
| !! | ATATTTGGTTTCACATAAAG+AGG | + | chr7_1:44217025-44217044 | None:intergenic | 25.0% |
| ! | TCGTAGTTTAAGTGTATATT+TGG | + | chr7_1:44217040-44217059 | None:intergenic | 25.0% |
| ! | TTTAGTGTAATTACAAGTGT+CGG | + | chr7_1:44217133-44217152 | None:intergenic | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | - | chr7_1:44217164-44217183 | Msa1020570:intron | 25.0% |
| ! | ACTTAAATTACTATGAAGCA+CGG | + | chr7_1:44217231-44217250 | None:intergenic | 25.0% |
| !!! | ATATTTTTGTGACAGATTTC+AGG | - | chr7_1:44217331-44217350 | Msa1020570:intron | 25.0% |
| !! | TCTCTTTTTGAATCATTTTC+AGG | + | chr7_1:44217374-44217393 | None:intergenic | 25.0% |
| !! | AGATAAAGCTTCCTTTTTAT+TGG | - | chr7_1:44217391-44217410 | Msa1020570:intron | 25.0% |
| ! | TGAGTATATTCATTTCTTAC+AGG | - | chr7_1:44217534-44217553 | Msa1020570:intron | 25.0% |
| ! | ATTTATGAACATCCTTATGA+AGG | - | chr7_1:44217568-44217587 | Msa1020570:intron | 25.0% |
| ! | AAGTTCTTCACTTATGTAAA+AGG | + | chr7_1:44217900-44217919 | None:intergenic | 25.0% |
| ! | TTTCCCATATATTCATAGAA+CGG | + | chr7_1:44218026-44218045 | None:intergenic | 25.0% |
| !!! | TAACAACATTGTTTTAGATG+AGG | + | chr7_1:44218072-44218091 | None:intergenic | 25.0% |
| !! | ACAAGATCAAATTTTAGATC+AGG | + | chr7_1:44218266-44218285 | None:intergenic | 25.0% |
| ! | ACATACACAATCAAGTATAT+TGG | + | chr7_1:44218469-44218488 | None:intergenic | 25.0% |
| !! | CTTAAGATTTTACCATCTTA+TGG | - | chr7_1:44218547-44218566 | Msa1020570:intron | 25.0% |
| !!! | TTTTTTCAGAGAAATCATCA+CGG | - | chr7_1:44218664-44218683 | Msa1020570:intron | 25.0% |
| !! | AGAATGATCTGTAGTATTTT+CGG | + | chr7_1:44218695-44218714 | None:intergenic | 25.0% |
| ! | TAATACATTGAGAGAAAAAG+AGG | - | chr7_1:44219023-44219042 | Msa1020570:intron | 25.0% |
| ! | AAGTTATTCGATCATAATGT+TGG | - | chr7_1:44219290-44219309 | Msa1020570:intron | 25.0% |
| ! | ATCTGCAATTAGGATTTAAT+GGG | - | chr7_1:44219600-44219619 | Msa1020570:CDS | 25.0% |
| ! | AAATTAACCTTTATTCTTGG+AGG | + | chr7_1:44219972-44219991 | None:intergenic | 25.0% |
| ! | AAGAATGAATAAACTTTGCA+GGG | + | chr7_1:44220896-44220915 | None:intergenic | 25.0% |
| ! | AAAGAATGAATAAACTTTGC+AGG | + | chr7_1:44220897-44220916 | None:intergenic | 25.0% |
| ! | CAAATATAAGGCTTATACAT+TGG | + | chr7_1:44221020-44221039 | None:intergenic | 25.0% |
| !! | CAATGTATAAGCCTTATATT+TGG | - | chr7_1:44221018-44221037 | Msa1020570:intron | 25.0% |
| ! | AACTTATTCAAGATAGCATA+TGG | - | chr7_1:44221215-44221234 | Msa1020570:intron | 25.0% |
| !! | AAAATAAAATTTGAGGCAGA+TGG | + | chr7_1:44221286-44221305 | None:intergenic | 25.0% |
| !! | TACAATAAGCTATCTGTTTT+TGG | + | chr7_1:44221456-44221475 | None:intergenic | 25.0% |
| !! | AGATAATGGTGACATATTTA+GGG | + | chr7_1:44221546-44221565 | None:intergenic | 25.0% |
| ! | TTGATCAGTTATATTGTTGT+TGG | - | chr7_1:44221647-44221666 | Msa1020570:intron | 25.0% |
| !!! | GACATTTTAGAATAAACGTT+TGG | - | chr7_1:44222232-44222251 | Msa1020570:CDS | 25.0% |
| !!! | GAGCTTATTTATAACTTGTT+TGG | - | chr7_1:44222257-44222276 | Msa1020570:CDS | 25.0% |
| ! | ATTATTGTTGTTGTTGAGAG+AGG | + | chr7_1:44216258-44216277 | None:intergenic | 30.0% |
| AGGAATTGTGAATCATTGTT+GGG | + | chr7_1:44216326-44216345 | None:intergenic | 30.0% | |
| AAGGAATTGTGAATCATTGT+TGG | + | chr7_1:44216327-44216346 | None:intergenic | 30.0% | |
| ! | TTTGAAACACCCATTAATCA+AGG | + | chr7_1:44216346-44216365 | None:intergenic | 30.0% |
| !! | GGTTTTGTGTTGACAAAAAT+TGG | - | chr7_1:44216774-44216793 | Msa1020570:intron | 30.0% |
| TTCTACTTGAAGCTAGAAAT+TGG | + | chr7_1:44216917-44216936 | None:intergenic | 30.0% | |
| ! | ATTTGGTTTCACATAAAGAG+GGG | + | chr7_1:44217023-44217042 | None:intergenic | 30.0% |
| ! | TAAAGCTTCCTTTTTATTGG+AGG | - | chr7_1:44217394-44217413 | Msa1020570:intron | 30.0% |
| ATCAAGTACCTCCAATAAAA+AGG | + | chr7_1:44217405-44217424 | None:intergenic | 30.0% | |
| TGAATACATGAAGCAAATGA+TGG | + | chr7_1:44217429-44217448 | None:intergenic | 30.0% | |
| TGCACATAAGACAAAAACAA+AGG | + | chr7_1:44217508-44217527 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTTGTCTTATGTGC+AGG | - | chr7_1:44217507-44217526 | Msa1020570:intron | 30.0% |
| AGCCAACTAAATTAATTCCA+TGG | - | chr7_1:44217602-44217621 | Msa1020570:intron | 30.0% | |
| GCCAACTAAATTAATTCCAT+GGG | - | chr7_1:44217603-44217622 | Msa1020570:intron | 30.0% | |
| ACCCATGGAATTAATTTAGT+TGG | + | chr7_1:44217607-44217626 | None:intergenic | 30.0% | |
| ATTCCATGGGTAAAGTTATT+TGG | - | chr7_1:44217616-44217635 | Msa1020570:CDS | 30.0% | |
| ATTCCAAATAACTTTACCCA+TGG | + | chr7_1:44217622-44217641 | None:intergenic | 30.0% | |
| CACACACATAATATCATTCA+TGG | + | chr7_1:44217745-44217764 | None:intergenic | 30.0% | |
| ! | ACCGTTGATTGATTAGTATA+TGG | - | chr7_1:44217798-44217817 | Msa1020570:intron | 30.0% |
| CCCATATACTAATCAATCAA+CGG | + | chr7_1:44217802-44217821 | None:intergenic | 30.0% | |
| ! | CCGTTGATTGATTAGTATAT+GGG | - | chr7_1:44217799-44217818 | Msa1020570:intron | 30.0% |
| AACGAGTAATTCACTTTACA+GGG | + | chr7_1:44217843-44217862 | None:intergenic | 30.0% | |
| AAACGAGTAATTCACTTTAC+AGG | + | chr7_1:44217844-44217863 | None:intergenic | 30.0% | |
| ACGGTACAAATATATAACCA+GGG | + | chr7_1:44218007-44218026 | None:intergenic | 30.0% | |
| AACGGTACAAATATATAACC+AGG | + | chr7_1:44218008-44218027 | None:intergenic | 30.0% | |
| TGTACCGTTCTATGAATATA+TGG | - | chr7_1:44218019-44218038 | Msa1020570:intron | 30.0% | |
| GTACCGTTCTATGAATATAT+GGG | - | chr7_1:44218020-44218039 | Msa1020570:intron | 30.0% | |
| TGAATATATGGGAAACTGTT+CGG | - | chr7_1:44218031-44218050 | Msa1020570:intron | 30.0% | |
| TTGTTAAATAACGGCTATAG+TGG | - | chr7_1:44218086-44218105 | Msa1020570:intron | 30.0% | |
| TTTGCATTCAAATCAGGAAT+AGG | + | chr7_1:44218380-44218399 | None:intergenic | 30.0% | |
| ! | GTTTCTTTTGCATTCAAATC+AGG | + | chr7_1:44218386-44218405 | None:intergenic | 30.0% |
| TTGATAGGAATAAGAGTTAG+AGG | + | chr7_1:44218417-44218436 | None:intergenic | 30.0% | |
| ! | TTTTACCATCTTATGGCATT+TGG | - | chr7_1:44218554-44218573 | Msa1020570:intron | 30.0% |
| ATTCTCGAGCTATTCAAAAT+GGG | - | chr7_1:44218710-44218729 | Msa1020570:intron | 30.0% | |
| ! | ATTGGGTTCTGTACATTTTT+AGG | + | chr7_1:44218772-44218791 | None:intergenic | 30.0% |
| ACAATATGATTGTCCTTGTT+TGG | + | chr7_1:44218997-44219016 | None:intergenic | 30.0% | |
| GAGGATTTGAAAATTGATAG+TGG | - | chr7_1:44219042-44219061 | Msa1020570:intron | 30.0% | |
| CACATAGTTAACATGAAATC+AGG | + | chr7_1:44219144-44219163 | None:intergenic | 30.0% | |
| ATTCGATCATAATGTTGGAT+TGG | - | chr7_1:44219295-44219314 | Msa1020570:intron | 30.0% | |
| ACGCAATAATGATGTGATAA+AGG | + | chr7_1:44219563-44219582 | None:intergenic | 30.0% | |
| CATCTGCAATTAGGATTTAA+TGG | - | chr7_1:44219599-44219618 | Msa1020570:CDS | 30.0% | |
| TAAAACTATTGGGTATTCGA+GGG | + | chr7_1:44219632-44219651 | None:intergenic | 30.0% | |
| TTAAAACTATTGGGTATTCG+AGG | + | chr7_1:44219633-44219652 | None:intergenic | 30.0% | |
| AAAAAACAGAGAAGGAATAG+TGG | + | chr7_1:44219881-44219900 | None:intergenic | 30.0% | |
| !!! | ACTATTCCTTCTCTGTTTTT+TGG | - | chr7_1:44219880-44219899 | Msa1020570:intron | 30.0% |
| ATGTTGTTAATCTCAAACAG+TGG | + | chr7_1:44220216-44220235 | None:intergenic | 30.0% | |
| TATTACTTAAAGCTGACAGA+AGG | - | chr7_1:44220265-44220284 | Msa1020570:intron | 30.0% | |
| CAAATCATATGAATGTGGAA+TGG | + | chr7_1:44220321-44220340 | None:intergenic | 30.0% | |
| ATCGACAAATCATATGAATG+TGG | + | chr7_1:44220326-44220345 | None:intergenic | 30.0% | |
| ! | CTCTAATAATTTTGTCGGAT+GGG | + | chr7_1:44220430-44220449 | None:intergenic | 30.0% |
| !! | TACTCATATTGATTCATGTG+TGG | + | chr7_1:44220654-44220673 | None:intergenic | 30.0% |
| TGTCAATATATGATGTTGAC+TGG | - | chr7_1:44220690-44220709 | Msa1020570:intron | 30.0% | |
| !!! | CGTCATTTTTCTTCATTCTA+TGG | - | chr7_1:44220870-44220889 | Msa1020570:CDS | 30.0% |
| GTTACCAGAATGCATTAAAA+AGG | - | chr7_1:44220975-44220994 | Msa1020570:intron | 30.0% | |
| ! | ACATCCTTTTTAATGCATTC+TGG | + | chr7_1:44220982-44221001 | None:intergenic | 30.0% |
| GAATGCATTAAAAAGGATGT+AGG | - | chr7_1:44220982-44221001 | Msa1020570:intron | 30.0% | |
| ! | GATAATGGTGACATATTTAG+GGG | + | chr7_1:44221545-44221564 | None:intergenic | 30.0% |
| ! | CAGATAATGGTGACATATTT+AGG | + | chr7_1:44221547-44221566 | None:intergenic | 30.0% |
| ACATTGAGTAGAACAGATAA+TGG | + | chr7_1:44221560-44221579 | None:intergenic | 30.0% | |
| !! | TTTTAAAAACTGAGCTGAAC+CGG | - | chr7_1:44221579-44221598 | Msa1020570:intron | 30.0% |
| TCAACCAATTTAACTGGAAA+CGG | - | chr7_1:44221607-44221626 | Msa1020570:intron | 30.0% | |
| ! | ATATTGTTGTTGGATTGAAC+CGG | - | chr7_1:44221657-44221676 | Msa1020570:intron | 30.0% |
| AGGAGAAAAGAAACAATACA+AGG | + | chr7_1:44221901-44221920 | None:intergenic | 30.0% | |
| AACAGAACAAAATGAACATG+AGG | + | chr7_1:44222086-44222105 | None:intergenic | 30.0% | |
| !!! | TCAGGTTATTTTTTTCATGC+TGG | - | chr7_1:44222160-44222179 | Msa1020570:intron | 30.0% |
| !!! | CAGGTTATTTTTTTCATGCT+GGG | - | chr7_1:44222161-44222180 | Msa1020570:intron | 30.0% |
| !!! | ATGATTCTGGTTTTGAAACA+AGG | - | chr7_1:44222210-44222229 | Msa1020570:CDS | 30.0% |
| ! | ACCTAACTTGTGTAAGTATT+TGG | - | chr7_1:44222289-44222308 | Msa1020570:exon | 30.0% |
| ! | CCTAACTTGTGTAAGTATTT+GGG | - | chr7_1:44222290-44222309 | Msa1020570:exon | 30.0% |
| TGAAGAAAAGGAAAATGGCT+AGG | - | chr7_1:44216156-44216175 | Msa1020570:three_prime_UTR | 35.0% | |
| CAACCAATTCTTCATCTTGA+TGG | + | chr7_1:44216193-44216212 | None:intergenic | 35.0% | |
| ! | GCAATTTTTGTGTTGTGACT+TGG | - | chr7_1:44216422-44216441 | Msa1020570:CDS | 35.0% |
| ! | TCTGGTTAAAAGTGAGTTGA+AGG | - | chr7_1:44216827-44216846 | Msa1020570:intron | 35.0% |
| ATTACTATGAAGCACGGATA+CGG | + | chr7_1:44217225-44217244 | None:intergenic | 35.0% | |
| ATGAACATCCTTATGAAGGA+TGG | - | chr7_1:44217572-44217591 | Msa1020570:intron | 35.0% | |
| ATACTTCTATGGTCATGCAT+TGG | + | chr7_1:44217675-44217694 | None:intergenic | 35.0% | |
| ! | ACCATAGAAGTATGCATTTG+TGG | - | chr7_1:44217682-44217701 | Msa1020570:CDS | 35.0% |
| ! | CCATAGAAGTATGCATTTGT+GGG | - | chr7_1:44217683-44217702 | Msa1020570:CDS | 35.0% |
| AGCCTTGATCCTAAAATTCA+GGG | - | chr7_1:44217965-44217984 | Msa1020570:intron | 35.0% | |
| !!! | ATCCCTGAATTTTAGGATCA+AGG | + | chr7_1:44217970-44217989 | None:intergenic | 35.0% |
| CGGTACAAATATATAACCAG+GGG | + | chr7_1:44218006-44218025 | None:intergenic | 35.0% | |
| ! | TTTTAGATCAGGTTTGTCGA+TGG | + | chr7_1:44218255-44218274 | None:intergenic | 35.0% |
| TAGGAATAAGAGTTAGAGGT+TGG | + | chr7_1:44218413-44218432 | None:intergenic | 35.0% | |
| AACTCTTATTCCTATCAAGC+AGG | - | chr7_1:44218419-44218438 | Msa1020570:intron | 35.0% | |
| ACTCTTATTCCTATCAAGCA+GGG | - | chr7_1:44218420-44218439 | Msa1020570:intron | 35.0% | |
| TTAGTTGCAATGTAAAGCCT+TGG | - | chr7_1:44218593-44218612 | Msa1020570:intron | 35.0% | |
| ! | TGATCTGTAGTATTTTCGGA+AGG | + | chr7_1:44218691-44218710 | None:intergenic | 35.0% |
| CATTCTCGAGCTATTCAAAA+TGG | - | chr7_1:44218709-44218728 | Msa1020570:intron | 35.0% | |
| ATTCAAAATGGGTCTGTTGA+TGG | - | chr7_1:44218721-44218740 | Msa1020570:intron | 35.0% | |
| ! | AAAAACTGACCTTTGAGAGT+AGG | + | chr7_1:44219094-44219113 | None:intergenic | 35.0% |
| GCTATAGCATTGTAACATTG+TGG | - | chr7_1:44219388-44219407 | Msa1020570:CDS | 35.0% | |
| AAACTCAAAGATCAGAGCAA+AGG | + | chr7_1:44219909-44219928 | None:intergenic | 35.0% | |
| TAACCTTTATTCTTGGAGGT+TGG | + | chr7_1:44219968-44219987 | None:intergenic | 35.0% | |
| TTGGGAATGGAATTCTTTGA+AGG | - | chr7_1:44220021-44220040 | Msa1020570:intron | 35.0% | |
| AACAACAGTGTACAAACACA+GGG | + | chr7_1:44220137-44220156 | None:intergenic | 35.0% | |
| AAACAACAGTGTACAAACAC+AGG | + | chr7_1:44220138-44220157 | None:intergenic | 35.0% | |
| ! | TTGTTTAGTCTTCGCAATAG+CGG | - | chr7_1:44220152-44220171 | Msa1020570:intron | 35.0% |
| TATCCGCTATATCAGTTTCA+GGG | - | chr7_1:44220176-44220195 | Msa1020570:intron | 35.0% | |
| AAACCCTGAAACTGATATAG+CGG | + | chr7_1:44220182-44220201 | None:intergenic | 35.0% | |
| ! | GCTCTAATAATTTTGTCGGA+TGG | + | chr7_1:44220431-44220450 | None:intergenic | 35.0% |
| ! | TGGCGCTCTAATAATTTTGT+CGG | + | chr7_1:44220435-44220454 | None:intergenic | 35.0% |
| ! | AAAATTATTAGAGCGCCACT+TGG | - | chr7_1:44220437-44220456 | Msa1020570:intron | 35.0% |
| TTACAATCGTGCACAAGATT+CGG | - | chr7_1:44220461-44220480 | Msa1020570:intron | 35.0% | |
| TCAACTGCAATAAGACATTC+TGG | + | chr7_1:44220538-44220557 | None:intergenic | 35.0% | |
| GTGTGGAAGAATTAATATCC+TGG | + | chr7_1:44220637-44220656 | None:intergenic | 35.0% | |
| ACCTTTGAGCTATATTGACA+GGG | + | chr7_1:44220841-44220860 | None:intergenic | 35.0% | |
| AACCTTTGAGCTATATTGAC+AGG | + | chr7_1:44220842-44220861 | None:intergenic | 35.0% | |
| ! | ACTGACTCTGTCCAAATATA+AGG | + | chr7_1:44221032-44221051 | None:intergenic | 35.0% |
| TATTTGGACAGAGTCAGTTT+AGG | - | chr7_1:44221034-44221053 | Msa1020570:intron | 35.0% | |
| !! | TATTTAGGGGTGTTTGGTTA+AGG | + | chr7_1:44221532-44221551 | None:intergenic | 35.0% |
| TCCAGTTAAATTGGTTGAAC+CGG | + | chr7_1:44221605-44221624 | None:intergenic | 35.0% | |
| CAACCAATTTAACTGGAAAC+GGG | - | chr7_1:44221608-44221627 | Msa1020570:intron | 35.0% | |
| TGATCAAAGCAACTGTGAAA+TGG | + | chr7_1:44221634-44221653 | None:intergenic | 35.0% | |
| ! | TATTGTTGTTGGATTGAACC+GGG | - | chr7_1:44221658-44221677 | Msa1020570:intron | 35.0% |
| CAAGTCTGTATCCTTAGAAA+CGG | + | chr7_1:44221872-44221891 | None:intergenic | 35.0% | |
| ATTTGTCAGCAATCAAGCAA+TGG | - | chr7_1:44221976-44221995 | Msa1020570:CDS | 35.0% | |
| AGGAATGAATTACTTCAGTG+AGG | - | chr7_1:44222006-44222025 | Msa1020570:intron | 35.0% | |
| ATTCTGAACAAAGTCCAAAG+AGG | - | chr7_1:44222029-44222048 | Msa1020570:intron | 35.0% | |
| CCCAAATACTTACACAAGTT+AGG | + | chr7_1:44222293-44222312 | None:intergenic | 35.0% | |
| AAAATGGCTAGGTCTGCTAA+AGG | - | chr7_1:44216167-44216186 | Msa1020570:three_prime_UTR | 40.0% | |
| AGGCCATCAAGATGAAGAAT+TGG | - | chr7_1:44216187-44216206 | Msa1020570:three_prime_UTR | 40.0% | |
| TTGAGAGAGGAAGATGTGTT+TGG | + | chr7_1:44216245-44216264 | None:intergenic | 40.0% | |
| CTGAATGCTTAGAACGATGA+GGG | + | chr7_1:44216488-44216507 | None:intergenic | 40.0% | |
| TCTGAATGCTTAGAACGATG+AGG | + | chr7_1:44216489-44216508 | None:intergenic | 40.0% | |
| CAACGTGTTAGTGTTGTGTT+CGG | - | chr7_1:44217265-44217284 | Msa1020570:intron | 40.0% | |
| TGTGCTTCATAGGTGATGAT+TGG | - | chr7_1:44217292-44217311 | Msa1020570:intron | 40.0% | |
| TCCTTATGAAGGATGGAATC+AGG | - | chr7_1:44217579-44217598 | Msa1020570:intron | 40.0% | |
| TCCTGATTCCATCCTTCATA+AGG | + | chr7_1:44217583-44217602 | None:intergenic | 40.0% | |
| CCCACAAATGCATACTTCTA+TGG | + | chr7_1:44217686-44217705 | None:intergenic | 40.0% | |
| !! | TGAGCTGGATTCTAGCTTAT+AGG | + | chr7_1:44217940-44217959 | None:intergenic | 40.0% |
| GAGCCTTGATCCTAAAATTC+AGG | - | chr7_1:44217964-44217983 | Msa1020570:intron | 40.0% | |
| ! | TGTCGAGATCCCTGAATTTT+AGG | + | chr7_1:44217977-44217996 | None:intergenic | 40.0% |
| GCACTATTGTAACTGCTAAC+TGG | + | chr7_1:44218179-44218198 | None:intergenic | 40.0% | |
| GCTATAGCATTGTAGCGTAT+TGG | - | chr7_1:44218197-44218216 | Msa1020570:intron | 40.0% | |
| TATATGCATCCCTGCTTGAT+AGG | + | chr7_1:44218432-44218451 | None:intergenic | 40.0% | |
| ACTTGCCAAATGCCATAAGA+TGG | + | chr7_1:44218562-44218581 | None:intergenic | 40.0% | |
| AAGCCTTGGAATAATAGCAC+TGG | - | chr7_1:44218607-44218626 | Msa1020570:intron | 40.0% | |
| CTTTCTGAATAGTTGTGGAG+GGG | + | chr7_1:44218804-44218823 | None:intergenic | 40.0% | |
| CCTTTCTGAATAGTTGTGGA+GGG | + | chr7_1:44218805-44218824 | None:intergenic | 40.0% | |
| ACCTTTCTGAATAGTTGTGG+AGG | + | chr7_1:44218806-44218825 | None:intergenic | 40.0% | |
| GCAACCTTTCTGAATAGTTG+TGG | + | chr7_1:44218809-44218828 | None:intergenic | 40.0% | |
| ATGTTTGATCCGGTTGTTAG+CGG | - | chr7_1:44218883-44218902 | Msa1020570:intron | 40.0% | |
| ATGGCTTAGCAAACCAAACA+AGG | - | chr7_1:44218981-44219000 | Msa1020570:intron | 40.0% | |
| CAGAAGAATGAGAATGGGTA+TGG | + | chr7_1:44219789-44219808 | None:intergenic | 40.0% | |
| GCATGCAGAAGAATGAGAAT+GGG | + | chr7_1:44219794-44219813 | None:intergenic | 40.0% | |
| TGCATGCAGAAGAATGAGAA+TGG | + | chr7_1:44219795-44219814 | None:intergenic | 40.0% | |
| TGGAGAAACAGGAGAAACAT+AGG | + | chr7_1:44219861-44219880 | None:intergenic | 40.0% | |
| ! | AGAAGGAATAGTGGAGAAAC+AGG | + | chr7_1:44219872-44219891 | None:intergenic | 40.0% |
| AGGAAGCCAAAAAACAGAGA+AGG | + | chr7_1:44219889-44219908 | None:intergenic | 40.0% | |
| ! | TGAGTTTTCTGCGAGAACAA+TGG | - | chr7_1:44219922-44219941 | Msa1020570:intron | 40.0% |
| ACACCAACCTCCAAGAATAA+AGG | - | chr7_1:44219962-44219981 | Msa1020570:intron | 40.0% | |
| ACTTCAAGGTTGTCAACAGT+CGG | + | chr7_1:44219998-44220017 | None:intergenic | 40.0% | |
| CTATCCGCTATATCAGTTTC+AGG | - | chr7_1:44220175-44220194 | Msa1020570:intron | 40.0% | |
| CAAGACTCAAGCGAGTAAAA+TGG | + | chr7_1:44220351-44220370 | None:intergenic | 40.0% | |
| ! | GGTGCAACAATACATTTTCC+AGG | - | chr7_1:44220616-44220635 | Msa1020570:intron | 40.0% |
| ATCAATTTCCACCGAGACAT+TGG | + | chr7_1:44220788-44220807 | None:intergenic | 40.0% | |
| ! | GTTGGTAGACGAACAAATAC+TGG | - | chr7_1:44220808-44220827 | Msa1020570:intron | 40.0% |
| CTTTGAGCTATATTGACAGG+GGG | + | chr7_1:44220839-44220858 | None:intergenic | 40.0% | |
| CCTTTGAGCTATATTGACAG+GGG | + | chr7_1:44220840-44220859 | None:intergenic | 40.0% | |
| ! | AGAGTCAGTTTAGGACTAGT+AGG | - | chr7_1:44221043-44221062 | Msa1020570:intron | 40.0% |
| ! | AGTTTAGGACTAGTAGGTGA+TGG | - | chr7_1:44221049-44221068 | Msa1020570:CDS | 40.0% |
| !! | GTGACATATTTAGGGGTGTT+TGG | + | chr7_1:44221538-44221557 | None:intergenic | 40.0% |
| ! | ATTGTTGTTGGATTGAACCG+GGG | - | chr7_1:44221659-44221678 | Msa1020570:intron | 40.0% |
| TTGAAACCACAGTTCAACTG+CGG | - | chr7_1:44221691-44221710 | Msa1020570:intron | 40.0% | |
| ! | TTTGTCATCTAGTTCAACCG+TGG | - | chr7_1:44221787-44221806 | Msa1020570:intron | 40.0% |
| ! | CGGTTCAATTGGTTTAACCA+CGG | + | chr7_1:44221807-44221826 | None:intergenic | 40.0% |
| CGTGGTTAAACCAATTGAAC+CGG | - | chr7_1:44221805-44221824 | Msa1020570:intron | 40.0% | |
| !! | AAACGGACTAAAGATCGAAC+CGG | + | chr7_1:44221855-44221874 | None:intergenic | 40.0% |
| CGATCTTTAGTCCGTTTCTA+AGG | - | chr7_1:44221858-44221877 | Msa1020570:intron | 40.0% | |
| ! | CGTTTCTAAGGATACAGACT+TGG | - | chr7_1:44221870-44221889 | Msa1020570:intron | 40.0% |
| AATCAAGCAATGGCATGTTC+AGG | - | chr7_1:44221986-44222005 | Msa1020570:CDS | 40.0% | |
| ATGTTGAGCCAAGTGAAAGT+GGG | - | chr7_1:44222125-44222144 | Msa1020570:intron | 40.0% | |
| ATGAACCCATCAGAGGGAAA+AGG | - | chr7_1:44216457-44216476 | Msa1020570:CDS | 45.0% | |
| TGAACCCATCAGAGGGAAAA+GGG | - | chr7_1:44216458-44216477 | Msa1020570:CDS | 45.0% | |
| ! | TTAGCCCTTTTCCCTCTGAT+GGG | + | chr7_1:44216465-44216484 | None:intergenic | 45.0% |
| !! | TCTTTGTAGCACCGACACTT+TGG | - | chr7_1:44216667-44216686 | Msa1020570:intron | 45.0% |
| !! | GTTCGGTGTTTGTGCTTCAT+AGG | - | chr7_1:44217282-44217301 | Msa1020570:intron | 45.0% |
| ! | GAGCCAGTGCTATTATTCCA+AGG | + | chr7_1:44218613-44218632 | None:intergenic | 45.0% |
| TGGAGGGGTCAGACATTATT+GGG | + | chr7_1:44218789-44218808 | None:intergenic | 45.0% | |
| CCCTCCACAACTATTCAGAA+AGG | - | chr7_1:44218802-44218821 | Msa1020570:intron | 45.0% | |
| ATTCAGAAAGGTTGCATCCC+TGG | - | chr7_1:44218814-44218833 | Msa1020570:intron | 45.0% | |
| CTACTTCTGTGGATGAACCA+GGG | + | chr7_1:44218834-44218853 | None:intergenic | 45.0% | |
| ACTACTTCTGTGGATGAACC+AGG | + | chr7_1:44218835-44218854 | None:intergenic | 45.0% | |
| AATCGCATTTGCATGGTCAG+GGG | + | chr7_1:44218859-44218878 | None:intergenic | 45.0% | |
| CAATCGCATTTGCATGGTCA+GGG | + | chr7_1:44218860-44218879 | None:intergenic | 45.0% | |
| CATGTCCAATCGCATTTGCA+TGG | + | chr7_1:44218866-44218885 | None:intergenic | 45.0% | |
| GCGATTGGACATGTTTGATC+CGG | - | chr7_1:44218873-44218892 | Msa1020570:intron | 45.0% | |
| TATGGTGACTCAACAGATGC+TGG | - | chr7_1:44218909-44218928 | Msa1020570:intron | 45.0% | |
| GCCTGTATCTAATCCTGACA+TGG | - | chr7_1:44218936-44218955 | Msa1020570:intron | 45.0% | |
| GCCATGTCAGGATTAGATAC+AGG | + | chr7_1:44218940-44218959 | None:intergenic | 45.0% | |
| ! | TGGAGATTTGAAGCCATGTC+AGG | + | chr7_1:44218952-44218971 | None:intergenic | 45.0% |
| CAAATCTCCAGCCTCAAGTA+TGG | - | chr7_1:44218962-44218981 | Msa1020570:intron | 45.0% | |
| !! | GGTTTGCTAAGCCATACTTG+AGG | + | chr7_1:44218976-44218995 | None:intergenic | 45.0% |
| TCTCAAGTGCCTACTCTCAA+AGG | - | chr7_1:44219082-44219101 | Msa1020570:intron | 45.0% | |
| CTATGAAGAGACACTCCTAC+TGG | + | chr7_1:44219340-44219359 | None:intergenic | 45.0% | |
| ACCGCAGTGTTGTCAAATAG+AGG | - | chr7_1:44219366-44219385 | Msa1020570:CDS | 45.0% | |
| GCCTCTATTTGACAACACTG+CGG | + | chr7_1:44219370-44219389 | None:intergenic | 45.0% | |
| TATACCAATGCTGTCCATCG+CGG | + | chr7_1:44219441-44219460 | None:intergenic | 45.0% | |
| AATCCTAATTGCAGATGCGC+AGG | + | chr7_1:44219596-44219615 | None:intergenic | 45.0% | |
| AGAAGAGTTGCACGAAGCAT+GGG | + | chr7_1:44219752-44219771 | None:intergenic | 45.0% | |
| AAGAAGAGTTGCACGAAGCA+TGG | + | chr7_1:44219753-44219772 | None:intergenic | 45.0% | |
| TTCTGCATGCAAACTGCGAA+GGG | - | chr7_1:44219804-44219823 | Msa1020570:intron | 45.0% | |
| GACTGTTGACAACCTTGAAG+TGG | - | chr7_1:44219997-44220016 | Msa1020570:intron | 45.0% | |
| TTGACAACCTTGAAGTGGCT+TGG | - | chr7_1:44220002-44220021 | Msa1020570:intron | 45.0% | |
| TGACAACCTTGAAGTGGCTT+GGG | - | chr7_1:44220003-44220022 | Msa1020570:intron | 45.0% | |
| GTGCACGATTGTAAACCAAG+TGG | + | chr7_1:44220455-44220474 | None:intergenic | 45.0% | |
| ACCTGAAGATTGTAGCGCTT+GGG | + | chr7_1:44220749-44220768 | None:intergenic | 45.0% | |
| TTTGTCCCAGACCAATGTCT+CGG | - | chr7_1:44220774-44220793 | Msa1020570:intron | 45.0% | |
| GTCTCGGTGGAAATTGATGT+TGG | - | chr7_1:44220790-44220809 | Msa1020570:intron | 45.0% | |
| CCCCTGTCAATATAGCTCAA+AGG | - | chr7_1:44220837-44220856 | Msa1020570:intron | 45.0% | |
| ! | TTAGGACTAGTAGGTGATGG+TGG | - | chr7_1:44221052-44221071 | Msa1020570:CDS | 45.0% |
| GTTAAATTGGTTGAACCGGC+CGG | + | chr7_1:44221601-44221620 | None:intergenic | 45.0% | |
| ! | GCCGGTTCAACCAATTTAAC+TGG | - | chr7_1:44221601-44221620 | Msa1020570:intron | 45.0% |
| TGGCCCGTTTCCAGTTAAAT+TGG | + | chr7_1:44221614-44221633 | None:intergenic | 45.0% | |
| ! | TCAACTGCGGCTGATTCAAT+CGG | - | chr7_1:44221704-44221723 | Msa1020570:intron | 45.0% |
| ! | CGTAGTTCAACCGGTTCAAT+TGG | + | chr7_1:44221818-44221837 | None:intergenic | 45.0% |
| ! | CTTTCGAGTCGTAGTTCAAC+CGG | + | chr7_1:44221827-44221846 | None:intergenic | 45.0% |
| CTAAGGATACAGACTTGGCA+TGG | - | chr7_1:44221875-44221894 | Msa1020570:intron | 45.0% | |
| GCTTCTCTTCTGAACCTCTT+TGG | + | chr7_1:44222046-44222065 | None:intergenic | 45.0% | |
| GATGTTGAGCCAAGTGAAAG+TGG | - | chr7_1:44222124-44222143 | Msa1020570:intron | 45.0% | |
| CCAAGTGAAAGTGGGATTGA+GGG | - | chr7_1:44222133-44222152 | Msa1020570:intron | 45.0% | |
| ! | GTGTTGTGACTTGGCAGTGA+AGG | - | chr7_1:44216431-44216450 | Msa1020570:CDS | 50.0% |
| ! | TTGTGACTTGGCAGTGAAGG+TGG | - | chr7_1:44216434-44216453 | Msa1020570:CDS | 50.0% |
| AAGGTGGATGAACCCATCAG+AGG | - | chr7_1:44216450-44216469 | Msa1020570:CDS | 50.0% | |
| AGGTGGATGAACCCATCAGA+GGG | - | chr7_1:44216451-44216470 | Msa1020570:CDS | 50.0% | |
| ! | GTTAGCCCTTTTCCCTCTGA+TGG | + | chr7_1:44216466-44216485 | None:intergenic | 50.0% |
| CACAGACACATGTCAGACAC+CGG | + | chr7_1:44216698-44216717 | None:intergenic | 50.0% | |
| TACGAAGCACAGACACTCCT+CGG | - | chr7_1:44217055-44217074 | Msa1020570:intron | 50.0% | |
| !! | TACAAGTGTCGGTGTCGTGT+CGG | + | chr7_1:44217122-44217141 | None:intergenic | 50.0% |
| !! | GTCAATGTCCGTGTCGTTTC+CGG | - | chr7_1:44217190-44217209 | Msa1020570:intron | 50.0% |
| ATGAAGCACGGATACGGACA+CGG | + | chr7_1:44217219-44217238 | None:intergenic | 50.0% | |
| !! | GATCAAGGCTCAAGTTGAGC+TGG | + | chr7_1:44217955-44217974 | None:intergenic | 50.0% |
| GATCTCGACATTGTTTCCCC+TGG | - | chr7_1:44217987-44218006 | Msa1020570:intron | 50.0% | |
| GTGGAGGGGTCAGACATTAT+TGG | + | chr7_1:44218790-44218809 | None:intergenic | 50.0% | |
| CCAATCGCATTTGCATGGTC+AGG | + | chr7_1:44218861-44218880 | None:intergenic | 50.0% | |
| CCTGACCATGCAAATGCGAT+TGG | - | chr7_1:44218858-44218877 | Msa1020570:intron | 50.0% | |
| TTTGATCCGGTTGTTAGCGG+TGG | - | chr7_1:44218886-44218905 | Msa1020570:intron | 50.0% | |
| ACCATACCACCGCTAACAAC+CGG | + | chr7_1:44218895-44218914 | None:intergenic | 50.0% | |
| TGCTAAGCCATACTTGAGGC+TGG | + | chr7_1:44218972-44218991 | None:intergenic | 50.0% | |
| AGCACTATAGCGCGCTATCA+CGG | - | chr7_1:44219485-44219504 | Msa1020570:CDS | 50.0% | |
| AGCAATGTGGTCCGTTGTGT+CGG | - | chr7_1:44219519-44219538 | Msa1020570:CDS | 50.0% | |
| AAGAGTTGCACGAAGCATGG+GGG | + | chr7_1:44219750-44219769 | None:intergenic | 50.0% | |
| GAAGAGTTGCACGAAGCATG+GGG | + | chr7_1:44219751-44219770 | None:intergenic | 50.0% | |
| CTTCTGCATGCAAACTGCGA+AGG | - | chr7_1:44219803-44219822 | Msa1020570:intron | 50.0% | |
| GCCATTCTTCTTCCTGCGAA+CGG | - | chr7_1:44219829-44219848 | Msa1020570:intron | 50.0% | |
| TCCGTTCGCAGGAAGAAGAA+TGG | + | chr7_1:44219833-44219852 | None:intergenic | 50.0% | |
| ! | ACCTTGAAGTGGCTTGGGAA+TGG | - | chr7_1:44220008-44220027 | Msa1020570:intron | 50.0% |
| TCCATTCCCAAGCCACTTCA+AGG | + | chr7_1:44220012-44220031 | None:intergenic | 50.0% | |
| ACCCAAGCGCTACAATCTTC+AGG | - | chr7_1:44220745-44220764 | Msa1020570:intron | 50.0% | |
| CACCTGAAGATTGTAGCGCT+TGG | + | chr7_1:44220750-44220769 | None:intergenic | 50.0% | |
| ! | TTCCACCGAGACATTGGTCT+GGG | + | chr7_1:44220782-44220801 | None:intergenic | 50.0% |
| TTTCCACCGAGACATTGGTC+TGG | + | chr7_1:44220783-44220802 | None:intergenic | 50.0% | |
| GAGGCAGATGGAAAACAACG+AGG | + | chr7_1:44221274-44221293 | None:intergenic | 50.0% | |
| AAAAACTGAGCTGAACCGGC+CGG | - | chr7_1:44221583-44221602 | Msa1020570:intron | 50.0% | |
| GGATTGAACCGGGGTTAAAG+CGG | - | chr7_1:44221668-44221687 | Msa1020570:intron | 50.0% | |
| GGTTTCAACCGCTTTAACCC+CGG | + | chr7_1:44221679-44221698 | None:intergenic | 50.0% | |
| AATCAGCCGCAGTTGAACTG+TGG | + | chr7_1:44221700-44221719 | None:intergenic | 50.0% | |
| CTACGACTCGAAAGTCTCAC+CGG | - | chr7_1:44221833-44221852 | Msa1020570:intron | 50.0% | |
| GCCAAGTGAAAGTGGGATTG+AGG | - | chr7_1:44222132-44222151 | Msa1020570:intron | 50.0% | |
| CCCTCAATCCCACTTTCACT+TGG | + | chr7_1:44222136-44222155 | None:intergenic | 50.0% | |
| GTGAAAGTGGGATTGAGGGT+AGG | - | chr7_1:44222137-44222156 | Msa1020570:intron | 50.0% | |
| CACCGACACTTTGGCATGTC+CGG | - | chr7_1:44216676-44216695 | Msa1020570:intron | 55.0% | |
| CACCGGACATGCCAAAGTGT+CGG | + | chr7_1:44216681-44216700 | None:intergenic | 55.0% | |
| ! | TCCTCGGATTAGACGTGTCC+CGG | - | chr7_1:44217071-44217090 | Msa1020570:intron | 55.0% |
| GATTAGACGTGTCCCGGTGT+CGG | - | chr7_1:44217077-44217096 | Msa1020570:intron | 55.0% | |
| GGTCAGGGGAACTACTTCTG+TGG | + | chr7_1:44218845-44218864 | None:intergenic | 55.0% | |
| TCCGGTTGTTAGCGGTGGTA+TGG | - | chr7_1:44218891-44218910 | Msa1020570:intron | 55.0% | |
| ! | ACTCCTACTGGCTACTGCTG+CGG | + | chr7_1:44219328-44219347 | None:intergenic | 55.0% |
| ! | CTGTTTTCTGCGATCCGCGA+TGG | - | chr7_1:44219424-44219443 | Msa1020570:CDS | 55.0% |
| GGACTCGAGTAGCAGCAATG+TGG | - | chr7_1:44219506-44219525 | Msa1020570:CDS | 55.0% | |
| GCTCCTGCGCATCTGCAATT+AGG | - | chr7_1:44219590-44219609 | Msa1020570:CDS | 55.0% | |
| CATAGGCTTTCTCCGTTCGC+AGG | + | chr7_1:44219844-44219863 | None:intergenic | 55.0% | |
| ! | GGTTGGTGTTTCAGACGAGG+AGG | + | chr7_1:44219951-44219970 | None:intergenic | 55.0% |
| !! | GGAGGTTGGTGTTTCAGACG+AGG | + | chr7_1:44219954-44219973 | None:intergenic | 55.0% |
| AGTGGGATTGAGGGTAGGTC+AGG | - | chr7_1:44222142-44222161 | Msa1020570:intron | 55.0% | |
| ACCGGGACACGTCTAATCCG+AGG | + | chr7_1:44217075-44217094 | None:intergenic | 60.0% | |
| ACACGACACGTGTCCGACAC+CGG | + | chr7_1:44217093-44217112 | None:intergenic | 60.0% | |
| !! | TGTCGGTGTCGTGTCGGTGT+CGG | + | chr7_1:44217116-44217135 | None:intergenic | 60.0% |
| CACGGACACCGGAAACGACA+CGG | + | chr7_1:44217201-44217220 | None:intergenic | 60.0% | |
| ACGGATACGGACACGGACAC+CGG | + | chr7_1:44217212-44217231 | None:intergenic | 60.0% | |
| CGATCCGCGATGGACAGCAT+TGG | - | chr7_1:44219434-44219453 | Msa1020570:CDS | 60.0% | |
| TGCAGCCACGACCGACACAA+CGG | + | chr7_1:44219533-44219552 | None:intergenic | 60.0% | |
| TTGCAGATGCGCAGGAGCGA+CGG | + | chr7_1:44219588-44219607 | None:intergenic | 60.0% | |
| GTCCCAGACCAATGTCTCGG+TGG | - | chr7_1:44220777-44220796 | Msa1020570:intron | 60.0% | |
| CACGACACGTGTCCGACACC+GGG | + | chr7_1:44217092-44217111 | None:intergenic | 65.0% | |
| CAGCCGCAGCAGTAGCCAGT+AGG | - | chr7_1:44219322-44219341 | Msa1020570:intron | 65.0% | |
| ! | GTGGTCCGTTGTGTCGGTCG+TGG | - | chr7_1:44219525-44219544 | Msa1020570:CDS | 65.0% |
| TGCAGATGCGCAGGAGCGAC+GGG | + | chr7_1:44219587-44219606 | None:intergenic | 65.0% | |
| GCAGATGCGCAGGAGCGACG+GGG | + | chr7_1:44219586-44219605 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 44216114 | 44222348 | 44216114 | ID=Msa1020570;Name=Msa1020570 |
| chr7_1 | mRNA | 44216114 | 44222348 | 44216114 | ID=Msa1020570-mRNA-1;Parent=Msa1020570;Name=Msa1020570-mRNA-1;_AED=0.12;_eAED=0.12;_QI=56|0.83|0.85|1|1|1|7|276|344 |
| chr7_1 | exon | 44216114 | 44216500 | 44216114 | ID=Msa1020570-mRNA-1:exon:8560;Parent=Msa1020570-mRNA-1 |
| chr7_1 | exon | 44217604 | 44217733 | 44217604 | ID=Msa1020570-mRNA-1:exon:8559;Parent=Msa1020570-mRNA-1 |
| chr7_1 | exon | 44219359 | 44219789 | 44219359 | ID=Msa1020570-mRNA-1:exon:8558;Parent=Msa1020570-mRNA-1 |
| chr7_1 | exon | 44220838 | 44220933 | 44220838 | ID=Msa1020570-mRNA-1:exon:8557;Parent=Msa1020570-mRNA-1 |
| chr7_1 | exon | 44221047 | 44221101 | 44221047 | ID=Msa1020570-mRNA-1:exon:8556;Parent=Msa1020570-mRNA-1 |
| chr7_1 | exon | 44221918 | 44222014 | 44221918 | ID=Msa1020570-mRNA-1:exon:8555;Parent=Msa1020570-mRNA-1 |
| chr7_1 | exon | 44222178 | 44222348 | 44222178 | ID=Msa1020570-mRNA-1:exon:8554;Parent=Msa1020570-mRNA-1 |
| chr7_1 | five_prime_UTR | 44222293 | 44222348 | 44222293 | ID=Msa1020570-mRNA-1:five_prime_utr;Parent=Msa1020570-mRNA-1 |
| chr7_1 | CDS | 44222178 | 44222292 | 44222178 | ID=Msa1020570-mRNA-1:cds;Parent=Msa1020570-mRNA-1 |
| chr7_1 | CDS | 44221918 | 44222014 | 44221918 | ID=Msa1020570-mRNA-1:cds;Parent=Msa1020570-mRNA-1 |
| chr7_1 | CDS | 44221047 | 44221101 | 44221047 | ID=Msa1020570-mRNA-1:cds;Parent=Msa1020570-mRNA-1 |
| chr7_1 | CDS | 44220838 | 44220933 | 44220838 | ID=Msa1020570-mRNA-1:cds;Parent=Msa1020570-mRNA-1 |
| chr7_1 | CDS | 44219359 | 44219789 | 44219359 | ID=Msa1020570-mRNA-1:cds;Parent=Msa1020570-mRNA-1 |
| chr7_1 | CDS | 44217604 | 44217733 | 44217604 | ID=Msa1020570-mRNA-1:cds;Parent=Msa1020570-mRNA-1 |
| chr7_1 | CDS | 44216390 | 44216500 | 44216390 | ID=Msa1020570-mRNA-1:cds;Parent=Msa1020570-mRNA-1 |
| chr7_1 | three_prime_UTR | 44216114 | 44216389 | 44216114 | ID=Msa1020570-mRNA-1:three_prime_utr;Parent=Msa1020570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
