Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022620 | KEH22976.1 | 90.965 | 487 | 44 | 0 | 1 | 487 | 1 | 487 | 0.0 | 879 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022620 | sp|Q9ATB4|TAD2B_ARATH | 56.612 | 484 | 178 | 8 | 18 | 485 | 18 | 485 | 0.0 | 525 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022620 | A0A072U0P5 | 90.965 | 487 | 44 | 0 | 1 | 487 | 1 | 487 | 0.0 | 879 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1022620 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022620 | MtrunA17_Chr7g0239471 | 90.965 | 487 | 44 | 0 | 1 | 487 | 1 | 487 | 0.0 | 879 |
| Msa1022620 | MtrunA17_Chr2g0290321 | 71.881 | 537 | 80 | 8 | 18 | 487 | 19 | 551 | 0.0 | 746 |
| Msa1022620 | MtrunA17_Chr2g0290341 | 67.928 | 502 | 99 | 5 | 34 | 487 | 19 | 506 | 0.0 | 663 |
| Msa1022620 | MtrunA17_Chr3g0120841 | 48.148 | 540 | 206 | 8 | 18 | 483 | 21 | 560 | 1.51e-153 | 449 |
| Msa1022620 | MtrunA17_Chr3g0120231 | 66.346 | 208 | 58 | 1 | 292 | 487 | 2 | 209 | 3.59e-87 | 266 |
| Msa1022620 | MtrunA17_Chr3g0120201 | 46.947 | 262 | 118 | 5 | 237 | 483 | 6 | 261 | 7.19e-69 | 221 |
| Msa1022620 | MtrunA17_Chr3g0120221 | 61.728 | 162 | 60 | 1 | 18 | 177 | 16 | 177 | 1.70e-68 | 217 |
| Msa1022620 | MtrunA17_Chr7g0238851 | 90.909 | 77 | 7 | 0 | 19 | 95 | 5 | 81 | 4.05e-37 | 132 |
| Msa1022620 | MtrunA17_Chr3g0120191 | 61.644 | 73 | 28 | 0 | 107 | 179 | 11 | 83 | 3.54e-28 | 108 |
| Msa1022620 | MtrunA17_Chr3g0120181 | 72.414 | 58 | 16 | 0 | 38 | 95 | 2 | 59 | 6.86e-27 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022620 | AT4G16420.3 | 56.729 | 483 | 178 | 8 | 18 | 485 | 18 | 484 | 0.0 | 526 |
| Msa1022620 | AT4G16420.2 | 56.846 | 482 | 176 | 8 | 18 | 485 | 18 | 481 | 0.0 | 525 |
| Msa1022620 | AT4G16420.1 | 56.612 | 484 | 178 | 8 | 18 | 485 | 18 | 485 | 0.0 | 525 |
| Msa1022620 | AT3G07740.1 | 43.893 | 524 | 237 | 8 | 19 | 485 | 22 | 545 | 2.94e-137 | 407 |
| Msa1022620 | AT3G07740.3 | 44.158 | 505 | 226 | 7 | 37 | 485 | 20 | 524 | 2.81e-136 | 404 |
| Msa1022620 | AT3G07740.4 | 43.315 | 531 | 237 | 9 | 19 | 485 | 22 | 552 | 1.68e-134 | 400 |
| Msa1022620 | AT3G07740.2 | 43.763 | 473 | 210 | 7 | 69 | 485 | 2 | 474 | 9.16e-123 | 367 |
Find 112 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATTATAGGATCGGATTC+TGG | 0.183755 | 7_1:-49200879 | Msa1022620:intron |
| TCGTCGTTTCTTGAGGATTT+TGG | 0.221990 | 7_1:+49200634 | None:intergenic |
| ACAGACTCCTTAAGAAATTC+TGG | 0.251102 | 7_1:-49200667 | Msa1022620:intron |
| AAGAAACGACGACCCTTCTT+TGG | 0.270029 | 7_1:-49200623 | Msa1022620:CDS |
| AAATGTATGGCATGAATAAC+TGG | 0.272278 | 7_1:-49201380 | Msa1022620:CDS |
| AGTAGCTCGCCCTGCAGGTC+TGG | 0.289473 | 7_1:+49199874 | None:intergenic |
| AAATGTATGTGCTGCGAGTT+AGG | 0.296126 | 7_1:-49199696 | Msa1022620:CDS |
| TGATACATATCTATAATAAA+AGG | 0.299266 | 7_1:-49200468 | Msa1022620:intron |
| AGTTCTGTGTTCAGAGATAA+TGG | 0.309266 | 7_1:+49200155 | None:intergenic |
| GAAAAGAATTCAAGAGCTTA+AGG | 0.314875 | 7_1:-49200130 | Msa1022620:intron |
| ATGCTCATTAAGAAGGGATT+TGG | 0.323014 | 7_1:-49199540 | Msa1022620:CDS |
| CTCTCCATGCTTCCCTCTTC+CGG | 0.329198 | 7_1:-49201283 | Msa1022620:intron |
| TATTGTAATATCGATATTAC+AGG | 0.331609 | 7_1:-49201930 | Msa1022620:CDS |
| ACAAAAGCAATCATGCTTAC+AGG | 0.334147 | 7_1:-49201824 | Msa1022620:CDS |
| TCAACACATAAGTCAAAATC+TGG | 0.338230 | 7_1:+49201879 | None:intergenic |
| TTTGGAACCCCGCGATTGTT+CGG | 0.352779 | 7_1:+49199926 | None:intergenic |
| TTGGAACCCCGCGATTGTTC+GGG | 0.360592 | 7_1:+49199927 | None:intergenic |
| ACACTATAGGATTGTGTACT+TGG | 0.367311 | 7_1:-49201307 | Msa1022620:CDS |
| TTCAAGTTATGTCAATGAAA+TGG | 0.396353 | 7_1:-49199852 | Msa1022620:CDS |
| TAGGATATGTCTCATGTTGT+TGG | 0.396671 | 7_1:-49201170 | Msa1022620:CDS |
| ACCCTCTCATTTGCCCCGAC+TGG | 0.397600 | 7_1:-49201560 | Msa1022620:CDS |
| ATACACCATGTCAACTTTCA+TGG | 0.399055 | 7_1:+49199566 | None:intergenic |
| GGTGTTAAATCCTTCTCAAA+TGG | 0.404781 | 7_1:+49200258 | None:intergenic |
| ATTTCCTCCAGAATTTCTTA+AGG | 0.405009 | 7_1:+49200660 | None:intergenic |
| TCCGCAGACATCAAGGCATT+TGG | 0.409190 | 7_1:+49199908 | None:intergenic |
| TGCAGGTGGAACTAACAAAA+AGG | 0.414771 | 7_1:-49200835 | Msa1022620:CDS |
| TCGCAGGAAGCTCGTGCTGC+TGG | 0.418619 | 7_1:-49200013 | Msa1022620:intron |
| AGTGGAGATAACTCAGAATC+TGG | 0.422645 | 7_1:-49202517 | Msa1022620:CDS |
| TCTTCATCCGCGTTCCAGTC+GGG | 0.425170 | 7_1:+49201546 | None:intergenic |
| TCTGCTGATCCCAGACCTGC+AGG | 0.434755 | 7_1:-49199884 | Msa1022620:CDS |
| ATATTATAGGATCGGATTCT+GGG | 0.435344 | 7_1:-49200878 | Msa1022620:intron |
| TCTTGCCATGGGGAAAGGGC+AGG | 0.439550 | 7_1:-49201129 | Msa1022620:CDS |
| GTAGCTCGCCCTGCAGGTCT+GGG | 0.445211 | 7_1:+49199875 | None:intergenic |
| TCCAATAGAGGCCGGGGAAA+AGG | 0.446039 | 7_1:-49200810 | Msa1022620:intron |
| GTTCATGCGCTTTCATACTA+AGG | 0.450239 | 7_1:-49200202 | Msa1022620:CDS |
| CTGTCAGTACAAATGATTGC+TGG | 0.451807 | 7_1:-49199636 | Msa1022620:CDS |
| AAGTTGAAGAAAGTGCCCTT+AGG | 0.452945 | 7_1:-49199973 | Msa1022620:CDS |
| GGCACACGGCACACTTAATC+CGG | 0.453805 | 7_1:+49201901 | None:intergenic |
| TGAGCAATTACTCGCTGATA+TGG | 0.455025 | 7_1:-49200539 | Msa1022620:CDS |
| AACTCAGAATCTGGAGCTGC+AGG | 0.455987 | 7_1:-49202508 | Msa1022620:intron |
| GGATTTAACACCAGAGGAAA+AGG | 0.457443 | 7_1:-49200247 | Msa1022620:CDS |
| AACTTCTTGCCATGGGGAAA+GGG | 0.466541 | 7_1:-49201133 | Msa1022620:CDS |
| AGGCATGCACTGAACACTAT+AGG | 0.474478 | 7_1:-49201320 | Msa1022620:CDS |
| AAGGAGCGGGTGAAGCGAAA+AGG | 0.478432 | 7_1:-49201971 | Msa1022620:CDS |
| CCACTAGCTTCAACCAAAGA+AGG | 0.482411 | 7_1:+49200610 | None:intergenic |
| AAGCACTTTCTCTTGCCCTA+AGG | 0.483082 | 7_1:+49199957 | None:intergenic |
| GAACTTCTTGCCATGGGGAA+AGG | 0.484313 | 7_1:-49201134 | Msa1022620:CDS |
| ATGTGGTCCCGAACAATCGC+GGG | 0.490676 | 7_1:-49199934 | Msa1022620:CDS |
| CTTGAAGTAGCTCGCCCTGC+AGG | 0.492075 | 7_1:+49199869 | None:intergenic |
| TTCTTCATCCGCGTTCCAGT+CGG | 0.492141 | 7_1:+49201545 | None:intergenic |
| CTTCATCCGCGTTCCAGTCG+GGG | 0.497867 | 7_1:+49201547 | None:intergenic |
| GAAGCATCTCATACCGGAAG+AGG | 0.499604 | 7_1:+49201270 | None:intergenic |
| GTATGATATGCTCATTAAGA+AGG | 0.500449 | 7_1:-49199547 | Msa1022620:CDS |
| AAAGGCATCCAATAGAGGCC+GGG | 0.501091 | 7_1:-49200817 | Msa1022620:CDS |
| TCGATATTACAGGACAAATC+CGG | 0.502784 | 7_1:-49201920 | Msa1022620:CDS |
| GCAGCATGTGTCTTGACTGA+GGG | 0.510463 | 7_1:+49200855 | None:intergenic |
| AGCACTTTCTCTTGCCCTAA+GGG | 0.511703 | 7_1:+49199958 | None:intergenic |
| CCTTCTTTGGTTGAAGCTAG+TGG | 0.513297 | 7_1:-49200610 | Msa1022620:CDS |
| CTAGTGGTTATAACCCGAAA+AGG | 0.518651 | 7_1:-49200594 | Msa1022620:CDS |
| AGTTGAAGAAAGTGCCCTTA+GGG | 0.524489 | 7_1:-49199972 | Msa1022620:CDS |
| TGCTCATCGGATGTTCCAGC+TGG | 0.528399 | 7_1:-49199592 | Msa1022620:CDS |
| AAAAGGCATCCAATAGAGGC+CGG | 0.528852 | 7_1:-49200818 | Msa1022620:CDS |
| CAACTTTCATGGTATCCAGC+TGG | 0.530057 | 7_1:+49199577 | None:intergenic |
| TTGTAGGGACTTGAAATGTA+TGG | 0.531054 | 7_1:-49201393 | Msa1022620:intron |
| ATCTTCAGATACACAGTTGG+AGG | 0.533593 | 7_1:+49199669 | None:intergenic |
| AGGAGCGGGTGAAGCGAAAA+GGG | 0.534590 | 7_1:-49201970 | Msa1022620:CDS |
| TCAGTCAAGACACATGCTGC+AGG | 0.536875 | 7_1:-49200852 | Msa1022620:CDS |
| ATCACCCTGCCCTTTCCCCA+TGG | 0.538821 | 7_1:+49201124 | None:intergenic |
| CAGAGAAGAACTTCTTGCCA+TGG | 0.541694 | 7_1:-49201141 | Msa1022620:CDS |
| AGAAGGGTCGTCGTTTCTTG+AGG | 0.547054 | 7_1:+49200627 | None:intergenic |
| GGCAAGAGAAAGTGCTTATG+TGG | 0.547957 | 7_1:-49199951 | Msa1022620:CDS |
| CAAAAGCAATCATGCTTACA+GGG | 0.548051 | 7_1:-49201823 | Msa1022620:CDS |
| AGAGAAGAACTTCTTGCCAT+GGG | 0.548697 | 7_1:-49201140 | Msa1022620:CDS |
| CTTGCCATGGGGAAAGGGCA+GGG | 0.550128 | 7_1:-49201128 | Msa1022620:CDS |
| TGGTTATAACCCGAAAAGGC+AGG | 0.554434 | 7_1:-49200590 | Msa1022620:CDS |
| TGCATCTTCAGATACACAGT+TGG | 0.554518 | 7_1:+49199666 | None:intergenic |
| AGCAGAGTCCGCAGACATCA+AGG | 0.554768 | 7_1:+49199901 | None:intergenic |
| GGAAGAAATTCATACTTGAA+AGG | 0.555899 | 7_1:-49200299 | Msa1022620:CDS |
| CTTCAAAATCTGATGCTCAT+CGG | 0.557888 | 7_1:-49199605 | Msa1022620:CDS |
| TGCAGCATGTGTCTTGACTG+AGG | 0.563434 | 7_1:+49200854 | None:intergenic |
| AAGGCATCCAATAGAGGCCG+GGG | 0.566680 | 7_1:-49200816 | Msa1022620:CDS |
| AATGTATGTGCTGCGAGTTA+GGG | 0.575178 | 7_1:-49199695 | Msa1022620:CDS |
| TTCCAGTCGGGGCAAATGAG+AGG | 0.577347 | 7_1:+49201558 | None:intergenic |
| GTCAATGAAATGGATGCTGC+AGG | 0.580740 | 7_1:-49199842 | Msa1022620:CDS |
| ATATGCAAATCCATTTGAGA+AGG | 0.591672 | 7_1:-49200268 | Msa1022620:CDS |
| TGTGAGTTAGGTCAAGGAGC+GGG | 0.592638 | 7_1:-49201984 | Msa1022620:intron |
| TATGATATGCTCATTAAGAA+GGG | 0.593230 | 7_1:-49199546 | Msa1022620:CDS |
| TGAGAAGGATTTAACACCAG+AGG | 0.597905 | 7_1:-49200253 | Msa1022620:CDS |
| CTGCTGATCCCAGACCTGCA+GGG | 0.599308 | 7_1:-49199883 | Msa1022620:CDS |
| CATTTGCCCCGACTGGAACG+CGG | 0.599728 | 7_1:-49201553 | Msa1022620:CDS |
| CAATCATGCTTACAGGGTCA+TGG | 0.600463 | 7_1:-49201817 | Msa1022620:intron |
| TCCAGTCGGGGCAAATGAGA+GGG | 0.601693 | 7_1:+49201559 | None:intergenic |
| CACTAGCTTCAACCAAAGAA+GGG | 0.601892 | 7_1:+49200611 | None:intergenic |
| GAAGAAGTTGCTGAGCATGT+TGG | 0.602780 | 7_1:-49201357 | Msa1022620:CDS |
| GTCAAGACACATGCTGCAGG+TGG | 0.607552 | 7_1:-49200849 | Msa1022620:CDS |
| TATGTGGTCCCGAACAATCG+CGG | 0.611263 | 7_1:-49199935 | Msa1022620:CDS |
| AAGCATCTCATACCGGAAGA+GGG | 0.618355 | 7_1:+49201271 | None:intergenic |
| CAACACATAAGTCAAAATCT+GGG | 0.618792 | 7_1:+49201880 | None:intergenic |
| CATACCGGAAGAGGGAAGCA+TGG | 0.621701 | 7_1:+49201279 | None:intergenic |
| GGGCAGGGTGATGACAAGAA+AGG | 0.622437 | 7_1:-49201113 | Msa1022620:intron |
| TCCAAATGCCTTGATGTCTG+CGG | 0.623348 | 7_1:-49199909 | Msa1022620:CDS |
| TAAGTCAAAATCTGGGCACA+CGG | 0.634031 | 7_1:+49201887 | None:intergenic |
| TGTGTATCTGAAGATGCAAG+AGG | 0.661370 | 7_1:-49199661 | Msa1022620:CDS |
| GGCTTGATGAAAGAGAGCGC+AGG | 0.663647 | 7_1:-49200320 | Msa1022620:CDS |
| GACTCCTTAAGAAATTCTGG+AGG | 0.664705 | 7_1:-49200664 | Msa1022620:CDS |
| AATGTATGGCATGAATAACT+GGG | 0.679265 | 7_1:-49201379 | Msa1022620:CDS |
| TTGTGAGTTAGGTCAAGGAG+CGG | 0.679425 | 7_1:-49201985 | Msa1022620:intron |
| TGTTGGAACAAAGAACAAAG+AGG | 0.696475 | 7_1:-49201340 | Msa1022620:CDS |
| GGATACCATGAAAGTTGACA+TGG | 0.698778 | 7_1:-49199571 | Msa1022620:CDS |
| TGTGGTCCCGAACAATCGCG+GGG | 0.699968 | 7_1:-49199933 | Msa1022620:CDS |
| GAGAAGAACTTCTTGCCATG+GGG | 0.705178 | 7_1:-49201139 | Msa1022620:CDS |
| GTTTAACGACTCTGACACTG+CGG | 0.772673 | 7_1:-49200515 | Msa1022620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAATTAAATTTCATTC+AGG | + | chr7_1:49199937-49199956 | None:intergenic | 10.0% |
| !!! | TTTATGTAACTAATTTTAAT+TGG | - | chr7_1:49200163-49200182 | Msa1022620:CDS | 10.0% |
| !! | AAAATAAAATATAGTGTTTA+TGG | + | chr7_1:49200315-49200334 | None:intergenic | 10.0% |
| !! | TTCATTAAAATAAATGATTT+GGG | + | chr7_1:49200396-49200415 | None:intergenic | 10.0% |
| !! | TTTCATTAAAATAAATGATT+TGG | + | chr7_1:49200397-49200416 | None:intergenic | 10.0% |
| !!! | TTATTTTAATGAAAATCAAT+TGG | - | chr7_1:49200403-49200422 | Msa1022620:intron | 10.0% |
| !!! | AATATCTTTTTATTGTAATT+AGG | - | chr7_1:49200895-49200914 | Msa1022620:intron | 10.0% |
| !! | ATTTATTCATTTATGATTAA+TGG | - | chr7_1:49201483-49201502 | Msa1022620:intron | 10.0% |
| !! | ATATGATAAATCATTATATT+TGG | - | chr7_1:49202049-49202068 | Msa1022620:intron | 10.0% |
| !! | ACATCAAAAGAAAAAAAAAA+TGG | + | chr7_1:49199656-49199675 | None:intergenic | 15.0% |
| !!! | ATATTATTTGTTGTTGTTTT+TGG | - | chr7_1:49199698-49199717 | Msa1022620:CDS | 15.0% |
| !!! | TATTATTTGTTGTTGTTTTT+GGG | - | chr7_1:49199699-49199718 | Msa1022620:CDS | 15.0% |
| !! | ACATAGTAAATTAAAAAATG+TGG | + | chr7_1:49201098-49201117 | None:intergenic | 15.0% |
| !! | TAAATAGACAATTGAATTTA+GGG | + | chr7_1:49201464-49201483 | None:intergenic | 15.0% |
| !! | ATAAATAGACAATTGAATTT+AGG | + | chr7_1:49201465-49201484 | None:intergenic | 15.0% |
| !!! | TCTATATCAGTTTTTTAATA+TGG | - | chr7_1:49201911-49201930 | Msa1022620:CDS | 15.0% |
| !!! | TTTTCTACCAATAATTTTTT+TGG | - | chr7_1:49202105-49202124 | Msa1022620:intron | 15.0% |
| !! | ATCTATCGTTTATATATTAT+AGG | - | chr7_1:49202630-49202649 | Msa1022620:intron | 15.0% |
| !! | TGATACATATCTATAATAAA+AGG | - | chr7_1:49203053-49203072 | Msa1022620:intron | 15.0% |
| !! | TTTGAATTGAAAAATATTGA+AGG | - | chr7_1:49203180-49203199 | Msa1022620:intron | 15.0% |
| !! | AACAACAAATAATATAACAG+GGG | + | chr7_1:49199693-49199712 | None:intergenic | 20.0% |
| !! | CAACAACAAATAATATAACA+GGG | + | chr7_1:49199694-49199713 | None:intergenic | 20.0% |
| !! | ACAACAACAAATAATATAAC+AGG | + | chr7_1:49199695-49199714 | None:intergenic | 20.0% |
| !!! | GAGTTTTATTATGTTTCAAA+AGG | + | chr7_1:49199793-49199812 | None:intergenic | 20.0% |
| !! | TAATTTAAATGTGTAGTCAT+AGG | - | chr7_1:49199947-49199966 | Msa1022620:CDS | 20.0% |
| !! | CACATAAGTAAATTTACAAA+TGG | - | chr7_1:49200101-49200120 | Msa1022620:intron | 20.0% |
| !!! | TTACATAAACAATTTTGTGT+AGG | + | chr7_1:49200152-49200171 | None:intergenic | 20.0% |
| !!! | ACTAATTTTAATTGGATGAT+AGG | - | chr7_1:49200171-49200190 | Msa1022620:CDS | 20.0% |
| !!! | AATTACTCACAATTTTTCAA+AGG | - | chr7_1:49200196-49200215 | Msa1022620:CDS | 20.0% |
| !!! | TCATATTGGTCAATTTTTAT+AGG | + | chr7_1:49200225-49200244 | None:intergenic | 20.0% |
| !! | CAAAATACTTACATTCATAT+TGG | + | chr7_1:49200239-49200258 | None:intergenic | 20.0% |
| !!! | AAAATACCTTTTCTTTTAAG+AGG | + | chr7_1:49200267-49200286 | None:intergenic | 20.0% |
| !!! | TAAAATAAATGATTTGGGAT+TGG | + | chr7_1:49200391-49200410 | None:intergenic | 20.0% |
| !!! | CATTTTTAAAACGACATTTT+TGG | - | chr7_1:49200506-49200525 | Msa1022620:CDS | 20.0% |
| !!! | ACCTAAATTAATTTGGTTTT+CGG | + | chr7_1:49200581-49200600 | None:intergenic | 20.0% |
| !!! | ACAAGATACATTTTTCAATT+TGG | - | chr7_1:49200630-49200649 | Msa1022620:CDS | 20.0% |
| !!! | ATACATTTTTCAATTTGGTT+AGG | - | chr7_1:49200635-49200654 | Msa1022620:CDS | 20.0% |
| !!! | GTTAATTTTATTTACTGTGT+AGG | - | chr7_1:49200957-49200976 | Msa1022620:intron | 20.0% |
| !!! | AATGTTTGAACATAATTTTC+TGG | - | chr7_1:49201508-49201527 | Msa1022620:intron | 20.0% |
| !!! | ATGTTTGAACATAATTTTCT+GGG | - | chr7_1:49201509-49201528 | Msa1022620:intron | 20.0% |
| !! | TATTGTAATATCGATATTAC+AGG | - | chr7_1:49201591-49201610 | Msa1022620:intron | 20.0% |
| !!! | CAATAATTTTTTTGGTTGTA+GGG | - | chr7_1:49202113-49202132 | Msa1022620:intron | 20.0% |
| !! | AAGAAAATGATAATTCACAT+TGG | + | chr7_1:49202605-49202624 | None:intergenic | 20.0% |
| !! | TCGTTTATATATTATAGGAT+CGG | - | chr7_1:49202635-49202654 | Msa1022620:intron | 20.0% |
| !!! | AAAGGTGTGAATTTTATATT+TGG | - | chr7_1:49202729-49202748 | Msa1022620:intron | 20.0% |
| !! | AATATTGTGTAATGTCAATT+GGG | + | chr7_1:49202763-49202782 | None:intergenic | 20.0% |
| !!! | ATTTTTTATGAATTTGAGTG+TGG | + | chr7_1:49203122-49203141 | None:intergenic | 20.0% |
| ! | CTACTAGAGTAAATGATATT+AGG | - | chr7_1:49199849-49199868 | Msa1022620:CDS | 25.0% |
| !! | CTTATGTGACTAATTTTCAT+GGG | + | chr7_1:49200089-49200108 | None:intergenic | 25.0% |
| !! | ACTTATGTGACTAATTTTCA+TGG | + | chr7_1:49200090-49200109 | None:intergenic | 25.0% |
| !! | GGTATTTTTCCATTCATTAT+TGG | - | chr7_1:49200279-49200298 | Msa1022620:CDS | 25.0% |
| ! | AAAGAATAGCCAATAATGAA+TGG | + | chr7_1:49200291-49200310 | None:intergenic | 25.0% |
| ! | ACCGAAAACCAAATTAATTT+AGG | - | chr7_1:49200577-49200596 | Msa1022620:CDS | 25.0% |
| ! | TGAACTCACCTAAATTAATT+TGG | + | chr7_1:49200588-49200607 | None:intergenic | 25.0% |
| ! | AAAATGTATCTTGTCTGATT+CGG | + | chr7_1:49200624-49200643 | None:intergenic | 25.0% |
| !! | TTTCTTTTATAGTGATTCTG+TGG | + | chr7_1:49200745-49200764 | None:intergenic | 25.0% |
| ! | ATAGAGCATGATAATTGAAA+AGG | + | chr7_1:49201041-49201060 | None:intergenic | 25.0% |
| !!! | TTTTTAAACTTTGACTTGGA+TGG | + | chr7_1:49201181-49201200 | None:intergenic | 25.0% |
| !!! | TTGGTTTTTAAACTTTGACT+TGG | + | chr7_1:49201185-49201204 | None:intergenic | 25.0% |
| ! | GAAACTAAAGAATGAAAATG+TGG | + | chr7_1:49201218-49201237 | None:intergenic | 25.0% |
| !! | ATACACAATAAGTTTTCGTT+TGG | + | chr7_1:49201400-49201419 | None:intergenic | 25.0% |
| ! | GAAAACTTATTGTGTATGTT+TGG | - | chr7_1:49201403-49201422 | Msa1022620:intron | 25.0% |
| !! | AATTGAATTTAGGGTTGTTA+GGG | + | chr7_1:49201455-49201474 | None:intergenic | 25.0% |
| !! | TGTTTGAACATAATTTTCTG+GGG | - | chr7_1:49201510-49201529 | Msa1022620:intron | 25.0% |
| ! | AGGAAAACATTTGAAAGTAA+TGG | + | chr7_1:49201737-49201756 | None:intergenic | 25.0% |
| ! | TAAGTTTAACAAGACATCAA+AGG | + | chr7_1:49201757-49201776 | None:intergenic | 25.0% |
| !!! | TAACATTTTGATCGATAGAA+AGG | - | chr7_1:49201775-49201794 | Msa1022620:intron | 25.0% |
| !! | TGGTAATGCAATTATATCAA+CGG | + | chr7_1:49201848-49201867 | None:intergenic | 25.0% |
| ! | CCTACAACCAAAAAAATTAT+TGG | + | chr7_1:49202115-49202134 | None:intergenic | 25.0% |
| !!! | CCAATAATTTTTTTGGTTGT+AGG | - | chr7_1:49202112-49202131 | Msa1022620:intron | 25.0% |
| ! | TCATTCTTTCAGATAGATTT+AGG | - | chr7_1:49202548-49202567 | Msa1022620:intron | 25.0% |
| ! | CATTCTTTCAGATAGATTTA+GGG | - | chr7_1:49202549-49202568 | Msa1022620:intron | 25.0% |
| ! | CAATATTGTGTAATGTCAAT+TGG | + | chr7_1:49202764-49202783 | None:intergenic | 25.0% |
| !!! | TACACAATATTGATTCTTTG+AGG | - | chr7_1:49202772-49202791 | Msa1022620:intron | 25.0% |
| !!! | AACAACCATTTTAGTTTTGT+TGG | - | chr7_1:49203078-49203097 | Msa1022620:intron | 25.0% |
| ! | AGAAACCAACAAAACTAAAA+TGG | + | chr7_1:49203086-49203105 | None:intergenic | 25.0% |
| !! | TTCAAGTTATGTCAATGAAA+TGG | - | chr7_1:49203669-49203688 | Msa1022620:intron | 25.0% |
| ! | TATGATATGCTCATTAAGAA+GGG | - | chr7_1:49203975-49203994 | Msa1022620:CDS | 25.0% |
| !! | ACCTTTTCTTTTAAGAGGAA+TGG | + | chr7_1:49200262-49200281 | None:intergenic | 30.0% |
| TGAAAATAAGGAAGTTGACT+CGG | + | chr7_1:49200367-49200386 | None:intergenic | 30.0% | |
| ! | TTTGGGATTGGATGAAAATA+AGG | + | chr7_1:49200379-49200398 | None:intergenic | 30.0% |
| CCATACAACTTAATGAGAAT+TGG | + | chr7_1:49200434-49200453 | None:intergenic | 30.0% | |
| ! | CCAATTCTCATTAAGTTGTA+TGG | - | chr7_1:49200431-49200450 | Msa1022620:intron | 30.0% |
| ! | TTTGAGACCAAAATAACTGA+TGG | + | chr7_1:49200550-49200569 | None:intergenic | 30.0% |
| TAATTTAGGTGAGTTCAGTT+TGG | - | chr7_1:49200591-49200610 | Msa1022620:CDS | 30.0% | |
| ATAAGTTTGACAAAGGAACA+AGG | + | chr7_1:49200722-49200741 | None:intergenic | 30.0% | |
| ! | CCTATGTTTCTATGATTACT+CGG | + | chr7_1:49200799-49200818 | None:intergenic | 30.0% |
| CGAGTAATCATAGAAACATA+GGG | - | chr7_1:49200797-49200816 | Msa1022620:intron | 30.0% | |
| ! | AAATCAAACCTTTTGCATGA+TGG | + | chr7_1:49200856-49200875 | None:intergenic | 30.0% |
| ! | ATGCAACTATATGTTTTACG+TGG | - | chr7_1:49200935-49200954 | Msa1022620:intron | 30.0% |
| TTTATTTACTGTGTAGGTCA+AGG | - | chr7_1:49200963-49200982 | Msa1022620:intron | 30.0% | |
| AAAATGTGGCTATATGCAAT+TGG | + | chr7_1:49201204-49201223 | None:intergenic | 30.0% | |
| ! | CAATTGAATTTAGGGTTGTT+AGG | + | chr7_1:49201456-49201475 | None:intergenic | 30.0% |
| CAACACATAAGTCAAAATCT+GGG | + | chr7_1:49201644-49201663 | None:intergenic | 30.0% | |
| TCAACACATAAGTCAAAATC+TGG | + | chr7_1:49201645-49201664 | None:intergenic | 30.0% | |
| TGATATAATTGCATTACCAC+TGG | - | chr7_1:49201849-49201868 | Msa1022620:CDS | 30.0% | |
| GACAAATTATCCTGTCAATA+GGG | + | chr7_1:49201939-49201958 | None:intergenic | 30.0% | |
| AGACAAATTATCCTGTCAAT+AGG | + | chr7_1:49201940-49201959 | None:intergenic | 30.0% | |
| ! | TGAAGAAATTTTGCTTCTAG+AGG | - | chr7_1:49201992-49202011 | Msa1022620:intron | 30.0% |
| AAATGTATGGCATGAATAAC+TGG | - | chr7_1:49202141-49202160 | Msa1022620:intron | 30.0% | |
| AATGTATGGCATGAATAACT+GGG | - | chr7_1:49202142-49202161 | Msa1022620:intron | 30.0% | |
| ! | GCTAATCGTTCTTATTTACT+AGG | - | chr7_1:49202332-49202351 | Msa1022620:intron | 30.0% |
| TATATTATAGGATCGGATTC+TGG | - | chr7_1:49202642-49202661 | Msa1022620:intron | 30.0% | |
| ATATTATAGGATCGGATTCT+GGG | - | chr7_1:49202643-49202662 | Msa1022620:intron | 30.0% | |
| TGTAATGTCAATTGGGATTT+AGG | + | chr7_1:49202756-49202775 | None:intergenic | 30.0% | |
| TGTCAATGACAAAAGAACTA+TGG | + | chr7_1:49202837-49202856 | None:intergenic | 30.0% | |
| ATTTCCTCCAGAATTTCTTA+AGG | + | chr7_1:49202864-49202883 | None:intergenic | 30.0% | |
| ! | ATATCAAATTCCTGCCTTTT+CGG | + | chr7_1:49202944-49202963 | None:intergenic | 30.0% |
| GGAAGAAATTCATACTTGAA+AGG | - | chr7_1:49203222-49203241 | Msa1022620:intron | 30.0% | |
| ATATGCAAATCCATTTGAGA+AGG | - | chr7_1:49203253-49203272 | Msa1022620:intron | 30.0% | |
| GAAAAGAATTCAAGAGCTTA+AGG | - | chr7_1:49203391-49203410 | Msa1022620:intron | 30.0% | |
| TGGATGACATTCAATTGTTA+TGG | - | chr7_1:49203423-49203442 | Msa1022620:intron | 30.0% | |
| !!! | TTTTTGTTTTCTGAAACCGT+CGG | - | chr7_1:49203782-49203801 | Msa1022620:intron | 30.0% |
| GTATGATATGCTCATTAAGA+AGG | - | chr7_1:49203974-49203993 | Msa1022620:CDS | 30.0% | |
| !!! | TCGATCGATGCTTTTTTCTT+AGG | + | chr7_1:49199545-49199564 | None:intergenic | 35.0% |
| !! | TAAGAAAAAAGCATCGATCG+AGG | - | chr7_1:49199544-49199563 | Msa1022620:CDS | 35.0% |
| ! | ATATTAGGCCTTGTAAGCAA+AGG | - | chr7_1:49199864-49199883 | Msa1022620:CDS | 35.0% |
| TGAACAATCCTTTGCTTACA+AGG | + | chr7_1:49199875-49199894 | None:intergenic | 35.0% | |
| AAATGTGTAGTCATAGGTGT+TGG | - | chr7_1:49199953-49199972 | Msa1022620:CDS | 35.0% | |
| GCCATTCCTCTTAAAAGAAA+AGG | - | chr7_1:49200258-49200277 | Msa1022620:CDS | 35.0% | |
| !!! | GACATTTTTGGCATTAGCAT+CGG | - | chr7_1:49200518-49200537 | Msa1022620:CDS | 35.0% |
| TCTGTGGATAAGTTTGACAA+AGG | + | chr7_1:49200729-49200748 | None:intergenic | 35.0% | |
| CCGAGTAATCATAGAAACAT+AGG | - | chr7_1:49200796-49200815 | Msa1022620:intron | 35.0% | |
| ATGATGATCCATCATGCAAA+AGG | - | chr7_1:49200845-49200864 | Msa1022620:CDS | 35.0% | |
| AAAAAGAAGAATGCTGCAAG+TGG | - | chr7_1:49200986-49201005 | Msa1022620:intron | 35.0% | |
| TGGATGGAAATGAACAAGTT+TGG | + | chr7_1:49201165-49201184 | None:intergenic | 35.0% | |
| CACTTTGACAATTTGTAGCT+TGG | - | chr7_1:49201318-49201337 | Msa1022620:CDS | 35.0% | |
| TAGCTTGGAAATTATCGTCA+TGG | - | chr7_1:49201333-49201352 | Msa1022620:CDS | 35.0% | |
| TATCGTCATGGAATGAGTAT+CGG | - | chr7_1:49201345-49201364 | Msa1022620:CDS | 35.0% | |
| TCGATATTACAGGACAAATC+CGG | - | chr7_1:49201601-49201620 | Msa1022620:intron | 35.0% | |
| !! | TAAGCATGATTGCTTTTGTG+GGG | + | chr7_1:49201696-49201715 | None:intergenic | 35.0% |
| !! | GTAAGCATGATTGCTTTTGT+GGG | + | chr7_1:49201697-49201716 | None:intergenic | 35.0% |
| !! | TGTAAGCATGATTGCTTTTG+TGG | + | chr7_1:49201698-49201717 | None:intergenic | 35.0% |
| ACAAAAGCAATCATGCTTAC+AGG | - | chr7_1:49201697-49201716 | Msa1022620:intron | 35.0% | |
| CAAAAGCAATCATGCTTACA+GGG | - | chr7_1:49201698-49201717 | Msa1022620:intron | 35.0% | |
| AGATTCACAAGCATTTATGC+AGG | + | chr7_1:49201816-49201835 | None:intergenic | 35.0% | |
| CAATTATATCAACGGCGATT+TGG | + | chr7_1:49201840-49201859 | None:intergenic | 35.0% | |
| !! | AATTGCATTACCACTGGTTT+CGG | - | chr7_1:49201855-49201874 | Msa1022620:CDS | 35.0% |
| TAATATGGTTCCCTATTGAC+AGG | - | chr7_1:49201926-49201945 | Msa1022620:CDS | 35.0% | |
| !!! | ATTTTGCTTCTAGAGGTACT+TGG | - | chr7_1:49201999-49202018 | Msa1022620:intron | 35.0% |
| ! | TTTAAAGTCGATGCGACTAA+TGG | - | chr7_1:49202022-49202041 | Msa1022620:intron | 35.0% |
| TTGTAGGGACTTGAAATGTA+TGG | - | chr7_1:49202128-49202147 | Msa1022620:intron | 35.0% | |
| TGTTGGAACAAAGAACAAAG+AGG | - | chr7_1:49202181-49202200 | Msa1022620:intron | 35.0% | |
| ACACTATAGGATTGTGTACT+TGG | - | chr7_1:49202214-49202233 | Msa1022620:intron | 35.0% | |
| ! | TCATTTGAAGCATCTCATAC+CGG | + | chr7_1:49202260-49202279 | None:intergenic | 35.0% |
| TAGGATATGTCTCATGTTGT+TGG | - | chr7_1:49202351-49202370 | Msa1022620:intron | 35.0% | |
| !! | AACAAAAAGGCATCCAATAG+AGG | - | chr7_1:49202699-49202718 | Msa1022620:intron | 35.0% |
| ! | TAAAATTCACACCTTTTCCC+CGG | + | chr7_1:49202725-49202744 | None:intergenic | 35.0% |
| ACAGACTCCTTAAGAAATTC+TGG | - | chr7_1:49202854-49202873 | Msa1022620:intron | 35.0% | |
| ! | TATCAAATTCCTGCCTTTTC+GGG | + | chr7_1:49202943-49202962 | None:intergenic | 35.0% |
| GGTGTTAAATCCTTCTCAAA+TGG | + | chr7_1:49203266-49203285 | None:intergenic | 35.0% | |
| AGTTCTGTGTTCAGAGATAA+TGG | + | chr7_1:49203369-49203388 | None:intergenic | 35.0% | |
| AGAGCTTAAGGTTTGATTCA+TGG | - | chr7_1:49203403-49203422 | Msa1022620:intron | 35.0% | |
| !!! | CATTCACTTTTTTCACTGCA+TGG | - | chr7_1:49203447-49203466 | Msa1022620:intron | 35.0% |
| ! | CATTTGTTAAACATGATCGC+AGG | - | chr7_1:49203492-49203511 | Msa1022620:intron | 35.0% |
| CTTCAAAATCTGATGCTCAT+CGG | - | chr7_1:49203916-49203935 | Msa1022620:intron | 35.0% | |
| ATACACCATGTCAACTTTCA+TGG | + | chr7_1:49203958-49203977 | None:intergenic | 35.0% | |
| ATGCTCATTAAGAAGGGATT+TGG | - | chr7_1:49203981-49204000 | Msa1022620:CDS | 35.0% | |
| ! | GAGGCTACTTTGAATGATTG+CGG | - | chr7_1:49200047-49200066 | Msa1022620:intron | 40.0% |
| ! | AGGCTACTTTGAATGATTGC+GGG | - | chr7_1:49200048-49200067 | Msa1022620:intron | 40.0% |
| !!! | TTTTTGGCATTAGCATCGGT+CGG | - | chr7_1:49200522-49200541 | Msa1022620:CDS | 40.0% |
| TTTGAGTGTGCAATACGTAC+GGG | + | chr7_1:49200684-49200703 | None:intergenic | 40.0% | |
| GTTTGAGTGTGCAATACGTA+CGG | + | chr7_1:49200685-49200704 | None:intergenic | 40.0% | |
| AGTGGAGATAACTCAGAATC+TGG | - | chr7_1:49201004-49201023 | Msa1022620:intron | 40.0% | |
| AGTGTTTCTCGATCTTCGTA+AGG | - | chr7_1:49201243-49201262 | Msa1022620:intron | 40.0% | |
| AAGTGAATGAATGCACGCAT+TGG | + | chr7_1:49201303-49201322 | None:intergenic | 40.0% | |
| ATCGTCATGGAATGAGTATC+GGG | - | chr7_1:49201346-49201365 | Msa1022620:CDS | 40.0% | |
| !! | TTCTGGGGATTTTGTGAGTT+AGG | - | chr7_1:49201525-49201544 | Msa1022620:intron | 40.0% |
| ! | GGATTTTGTGAGTTAGGTCA+AGG | - | chr7_1:49201531-49201550 | Msa1022620:CDS | 40.0% |
| TAAGTCAAAATCTGGGCACA+CGG | + | chr7_1:49201637-49201656 | None:intergenic | 40.0% | |
| ! | TGTGTTGAGTGCTTTTCTGT+TGG | - | chr7_1:49201657-49201676 | Msa1022620:intron | 40.0% |
| AGAGAAGAACTTCTTGCCAT+GGG | - | chr7_1:49202381-49202400 | Msa1022620:intron | 40.0% | |
| TGCAGGTGGAACTAACAAAA+AGG | - | chr7_1:49202686-49202705 | Msa1022620:intron | 40.0% | |
| GACTCCTTAAGAAATTCTGG+AGG | - | chr7_1:49202857-49202876 | Msa1022620:intron | 40.0% | |
| ! | TCGTCGTTTCTTGAGGATTT+TGG | + | chr7_1:49202890-49202909 | None:intergenic | 40.0% |
| ! | CACTAGCTTCAACCAAAGAA+GGG | + | chr7_1:49202913-49202932 | None:intergenic | 40.0% |
| CTAGTGGTTATAACCCGAAA+AGG | - | chr7_1:49202927-49202946 | Msa1022620:intron | 40.0% | |
| TGAGCAATTACTCGCTGATA+TGG | - | chr7_1:49202982-49203001 | Msa1022620:intron | 40.0% | |
| TGAGAAGGATTTAACACCAG+AGG | - | chr7_1:49203268-49203287 | Msa1022620:intron | 40.0% | |
| GGATTTAACACCAGAGGAAA+AGG | - | chr7_1:49203274-49203293 | Msa1022620:intron | 40.0% | |
| GTTCATGCGCTTTCATACTA+AGG | - | chr7_1:49203319-49203338 | Msa1022620:intron | 40.0% | |
| !! | AAGTTGAAGAAAGTGCCCTT+AGG | - | chr7_1:49203548-49203567 | Msa1022620:intron | 40.0% |
| !! | AGTTGAAGAAAGTGCCCTTA+GGG | - | chr7_1:49203549-49203568 | Msa1022620:intron | 40.0% |
| AAATGTATGTGCTGCGAGTT+AGG | - | chr7_1:49203825-49203844 | Msa1022620:intron | 40.0% | |
| AATGTATGTGCTGCGAGTTA+GGG | - | chr7_1:49203826-49203845 | Msa1022620:intron | 40.0% | |
| ATCTTCAGATACACAGTTGG+AGG | + | chr7_1:49203855-49203874 | None:intergenic | 40.0% | |
| TGCATCTTCAGATACACAGT+TGG | + | chr7_1:49203858-49203877 | None:intergenic | 40.0% | |
| TGTGTATCTGAAGATGCAAG+AGG | - | chr7_1:49203860-49203879 | Msa1022620:intron | 40.0% | |
| CTGTCAGTACAAATGATTGC+TGG | - | chr7_1:49203885-49203904 | Msa1022620:intron | 40.0% | |
| GGATACCATGAAAGTTGACA+TGG | - | chr7_1:49203950-49203969 | Msa1022620:intron | 40.0% | |
| !!! | TTTTGGCATTAGCATCGGTC+GGG | - | chr7_1:49200523-49200542 | Msa1022620:CDS | 45.0% |
| ! | GTCGGGTCCATCAGTTATTT+TGG | - | chr7_1:49200540-49200559 | Msa1022620:CDS | 45.0% |
| TTGTGAGTTAGGTCAAGGAG+CGG | - | chr7_1:49201536-49201555 | Msa1022620:CDS | 45.0% | |
| CAATCATGCTTACAGGGTCA+TGG | - | chr7_1:49201704-49201723 | Msa1022620:intron | 45.0% | |
| AACAATGTTGCCGAAACCAG+TGG | + | chr7_1:49201868-49201887 | None:intergenic | 45.0% | |
| AAAGTCGATGCGACTAATGG+TGG | - | chr7_1:49202025-49202044 | Msa1022620:intron | 45.0% | |
| GAAGAAGTTGCTGAGCATGT+TGG | - | chr7_1:49202164-49202183 | Msa1022620:intron | 45.0% | |
| AGGCATGCACTGAACACTAT+AGG | - | chr7_1:49202201-49202220 | Msa1022620:intron | 45.0% | |
| AAGCATCTCATACCGGAAGA+GGG | + | chr7_1:49202253-49202272 | None:intergenic | 45.0% | |
| CAGAGAAGAACTTCTTGCCA+TGG | - | chr7_1:49202380-49202399 | Msa1022620:intron | 45.0% | |
| GAGAAGAACTTCTTGCCATG+GGG | - | chr7_1:49202382-49202401 | Msa1022620:intron | 45.0% | |
| AACTTCTTGCCATGGGGAAA+GGG | - | chr7_1:49202388-49202407 | Msa1022620:intron | 45.0% | |
| !! | AAAAGGCATCCAATAGAGGC+CGG | - | chr7_1:49202703-49202722 | Msa1022620:intron | 45.0% |
| AAGAAACGACGACCCTTCTT+TGG | - | chr7_1:49202898-49202917 | Msa1022620:intron | 45.0% | |
| ! | CCACTAGCTTCAACCAAAGA+AGG | + | chr7_1:49202914-49202933 | None:intergenic | 45.0% |
| CCTTCTTTGGTTGAAGCTAG+TGG | - | chr7_1:49202911-49202930 | Msa1022620:intron | 45.0% | |
| TGGTTATAACCCGAAAAGGC+AGG | - | chr7_1:49202931-49202950 | Msa1022620:intron | 45.0% | |
| GTTTAACGACTCTGACACTG+CGG | - | chr7_1:49203006-49203025 | Msa1022620:intron | 45.0% | |
| ! | CGACATATTGCCTTTTCCTC+TGG | + | chr7_1:49203287-49203306 | None:intergenic | 45.0% |
| AGCACTTTCTCTTGCCCTAA+GGG | + | chr7_1:49203566-49203585 | None:intergenic | 45.0% | |
| AAGCACTTTCTCTTGCCCTA+AGG | + | chr7_1:49203567-49203586 | None:intergenic | 45.0% | |
| !! | GGCAAGAGAAAGTGCTTATG+TGG | - | chr7_1:49203570-49203589 | Msa1022620:intron | 45.0% |
| TCCAAATGCCTTGATGTCTG+CGG | - | chr7_1:49203612-49203631 | Msa1022620:intron | 45.0% | |
| GTCAATGAAATGGATGCTGC+AGG | - | chr7_1:49203679-49203698 | Msa1022620:intron | 45.0% | |
| TGACAGAACATTACAGCCGA+CGG | + | chr7_1:49203801-49203820 | None:intergenic | 45.0% | |
| CAACTTTCATGGTATCCAGC+TGG | + | chr7_1:49203947-49203966 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTTTTG+AGG | - | chr7_1:49200028-49200047 | Msa1022620:intron | 5.0% |
| !!! | TTTAAATTTTTTTATTTTGT+TGG | - | chr7_1:49200658-49200677 | Msa1022620:CDS | 5.0% |
| !!! | TTTTACAAAATAATAAATAA+AGG | + | chr7_1:49200770-49200789 | None:intergenic | 5.0% |
| ! | AACTCAGAATCTGGAGCTGC+AGG | - | chr7_1:49201013-49201032 | Msa1022620:intron | 50.0% |
| GTTTGGATCGAAGCGTGCTT+TGG | - | chr7_1:49201420-49201439 | Msa1022620:intron | 50.0% | |
| TGTGAGTTAGGTCAAGGAGC+GGG | - | chr7_1:49201537-49201556 | Msa1022620:CDS | 50.0% | |
| TTCTTCATCCGCGTTCCAGT+CGG | + | chr7_1:49201979-49201998 | None:intergenic | 50.0% | |
| ! | GAAGCATCTCATACCGGAAG+AGG | + | chr7_1:49202254-49202273 | None:intergenic | 50.0% |
| GAACTTCTTGCCATGGGGAA+AGG | - | chr7_1:49202387-49202406 | Msa1022620:intron | 50.0% | |
| GCAGCATGTGTCTTGACTGA+GGG | + | chr7_1:49202669-49202688 | None:intergenic | 50.0% | |
| TGCAGCATGTGTCTTGACTG+AGG | + | chr7_1:49202670-49202689 | None:intergenic | 50.0% | |
| TCAGTCAAGACACATGCTGC+AGG | - | chr7_1:49202669-49202688 | Msa1022620:intron | 50.0% | |
| !! | AAAGGCATCCAATAGAGGCC+GGG | - | chr7_1:49202704-49202723 | Msa1022620:intron | 50.0% |
| AGAAGGGTCGTCGTTTCTTG+AGG | + | chr7_1:49202897-49202916 | None:intergenic | 50.0% | |
| TATGTGGTCCCGAACAATCG+CGG | - | chr7_1:49203586-49203605 | Msa1022620:intron | 50.0% | |
| ! | TTTGGAACCCCGCGATTGTT+CGG | + | chr7_1:49203598-49203617 | None:intergenic | 50.0% |
| ! | TCCGCAGACATCAAGGCATT+TGG | + | chr7_1:49203616-49203635 | None:intergenic | 50.0% |
| GTCGGCTGTAATGTTCTGTC+AGG | - | chr7_1:49203800-49203819 | Msa1022620:intron | 50.0% | |
| AAGGAGCGGGTGAAGCGAAA+AGG | - | chr7_1:49201550-49201569 | Msa1022620:CDS | 55.0% | |
| AGGAGCGGGTGAAGCGAAAA+GGG | - | chr7_1:49201551-49201570 | Msa1022620:CDS | 55.0% | |
| GGCACACGGCACACTTAATC+CGG | + | chr7_1:49201623-49201642 | None:intergenic | 55.0% | |
| TCCAGTCGGGGCAAATGAGA+GGG | + | chr7_1:49201965-49201984 | None:intergenic | 55.0% | |
| TTCCAGTCGGGGCAAATGAG+AGG | + | chr7_1:49201966-49201985 | None:intergenic | 55.0% | |
| TCTTCATCCGCGTTCCAGTC+GGG | + | chr7_1:49201978-49201997 | None:intergenic | 55.0% | |
| CTCTCCATGCTTCCCTCTTC+CGG | - | chr7_1:49202238-49202257 | Msa1022620:intron | 55.0% | |
| CATACCGGAAGAGGGAAGCA+TGG | + | chr7_1:49202245-49202264 | None:intergenic | 55.0% | |
| GGGCAGGGTGATGACAAGAA+AGG | - | chr7_1:49202408-49202427 | Msa1022620:intron | 55.0% | |
| GTCAAGACACATGCTGCAGG+TGG | - | chr7_1:49202672-49202691 | Msa1022620:intron | 55.0% | |
| ! | AAGGCATCCAATAGAGGCCG+GGG | - | chr7_1:49202705-49202724 | Msa1022620:intron | 55.0% |
| TCCAATAGAGGCCGGGGAAA+AGG | - | chr7_1:49202711-49202730 | Msa1022620:intron | 55.0% | |
| ! | ACCTTTTCCCCGGCCTCTAT+TGG | + | chr7_1:49202715-49202734 | None:intergenic | 55.0% |
| ! | GGCTTGATGAAAGAGAGCGC+AGG | - | chr7_1:49203201-49203220 | Msa1022620:intron | 55.0% |
| ATGTGGTCCCGAACAATCGC+GGG | - | chr7_1:49203587-49203606 | Msa1022620:intron | 55.0% | |
| TTGGAACCCCGCGATTGTTC+GGG | + | chr7_1:49203597-49203616 | None:intergenic | 55.0% | |
| AGCAGAGTCCGCAGACATCA+AGG | + | chr7_1:49203623-49203642 | None:intergenic | 55.0% | |
| TGCTCATCGGATGTTCCAGC+TGG | - | chr7_1:49203929-49203948 | Msa1022620:intron | 55.0% | |
| ACCCTCTCATTTGCCCCGAC+TGG | - | chr7_1:49201961-49201980 | Msa1022620:CDS | 60.0% | |
| CATTTGCCCCGACTGGAACG+CGG | - | chr7_1:49201968-49201987 | Msa1022620:CDS | 60.0% | |
| CTTCATCCGCGTTCCAGTCG+GGG | + | chr7_1:49201977-49201996 | None:intergenic | 60.0% | |
| TCTTGCCATGGGGAAAGGGC+AGG | - | chr7_1:49202392-49202411 | Msa1022620:intron | 60.0% | |
| CTTGCCATGGGGAAAGGGCA+GGG | - | chr7_1:49202393-49202412 | Msa1022620:intron | 60.0% | |
| ATCACCCTGCCCTTTCCCCA+TGG | + | chr7_1:49202400-49202419 | None:intergenic | 60.0% | |
| TGTGGTCCCGAACAATCGCG+GGG | - | chr7_1:49203588-49203607 | Msa1022620:intron | 60.0% | |
| TCTGCTGATCCCAGACCTGC+AGG | - | chr7_1:49203637-49203656 | Msa1022620:intron | 60.0% | |
| CTGCTGATCCCAGACCTGCA+GGG | - | chr7_1:49203638-49203657 | Msa1022620:intron | 60.0% | |
| CTTGAAGTAGCTCGCCCTGC+AGG | + | chr7_1:49203655-49203674 | None:intergenic | 60.0% | |
| TCGCAGGAAGCTCGTGCTGC+TGG | - | chr7_1:49203508-49203527 | Msa1022620:intron | 65.0% | |
| GTAGCTCGCCCTGCAGGTCT+GGG | + | chr7_1:49203649-49203668 | None:intergenic | 65.0% | |
| AGTAGCTCGCCCTGCAGGTC+TGG | + | chr7_1:49203650-49203669 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 49199530 | 49204013 | 49199530 | ID=Msa1022620;Name=Msa1022620 |
| chr7_1 | mRNA | 49199530 | 49204013 | 49199530 | ID=Msa1022620-mRNA-1;Parent=Msa1022620;Name=Msa1022620-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0|0.81|1|1|11|0|487 |
| chr7_1 | exon | 49203964 | 49204013 | 49203964 | ID=Msa1022620-mRNA-1:exon:9649;Parent=Msa1022620-mRNA-1 |
| chr7_1 | exon | 49202509 | 49202564 | 49202509 | ID=Msa1022620-mRNA-1:exon:9648;Parent=Msa1022620-mRNA-1 |
| chr7_1 | exon | 49201818 | 49201996 | 49201818 | ID=Msa1022620-mRNA-1:exon:9647;Parent=Msa1022620-mRNA-1 |
| chr7_1 | exon | 49201530 | 49201595 | 49201530 | ID=Msa1022620-mRNA-1:exon:9646;Parent=Msa1022620-mRNA-1 |
| chr7_1 | exon | 49201284 | 49201409 | 49201284 | ID=Msa1022620-mRNA-1:exon:9645;Parent=Msa1022620-mRNA-1 |
| chr7_1 | exon | 49201114 | 49201189 | 49201114 | ID=Msa1022620-mRNA-1:exon:9644;Parent=Msa1022620-mRNA-1 |
| chr7_1 | exon | 49200811 | 49200891 | 49200811 | ID=Msa1022620-mRNA-1:exon:9643;Parent=Msa1022620-mRNA-1 |
| chr7_1 | exon | 49200469 | 49200685 | 49200469 | ID=Msa1022620-mRNA-1:exon:9642;Parent=Msa1022620-mRNA-1 |
| chr7_1 | exon | 49200131 | 49200341 | 49200131 | ID=Msa1022620-mRNA-1:exon:9641;Parent=Msa1022620-mRNA-1 |
| chr7_1 | exon | 49199820 | 49200029 | 49199820 | ID=Msa1022620-mRNA-1:exon:9640;Parent=Msa1022620-mRNA-1 |
| chr7_1 | exon | 49199530 | 49199721 | 49199530 | ID=Msa1022620-mRNA-1:exon:9639;Parent=Msa1022620-mRNA-1 |
| chr7_1 | CDS | 49203964 | 49204013 | 49203964 | ID=Msa1022620-mRNA-1:cds;Parent=Msa1022620-mRNA-1 |
| chr7_1 | CDS | 49202509 | 49202564 | 49202509 | ID=Msa1022620-mRNA-1:cds;Parent=Msa1022620-mRNA-1 |
| chr7_1 | CDS | 49201818 | 49201996 | 49201818 | ID=Msa1022620-mRNA-1:cds;Parent=Msa1022620-mRNA-1 |
| chr7_1 | CDS | 49201530 | 49201595 | 49201530 | ID=Msa1022620-mRNA-1:cds;Parent=Msa1022620-mRNA-1 |
| chr7_1 | CDS | 49201284 | 49201409 | 49201284 | ID=Msa1022620-mRNA-1:cds;Parent=Msa1022620-mRNA-1 |
| chr7_1 | CDS | 49201114 | 49201189 | 49201114 | ID=Msa1022620-mRNA-1:cds;Parent=Msa1022620-mRNA-1 |
| chr7_1 | CDS | 49200811 | 49200891 | 49200811 | ID=Msa1022620-mRNA-1:cds;Parent=Msa1022620-mRNA-1 |
| chr7_1 | CDS | 49200469 | 49200685 | 49200469 | ID=Msa1022620-mRNA-1:cds;Parent=Msa1022620-mRNA-1 |
| chr7_1 | CDS | 49200131 | 49200341 | 49200131 | ID=Msa1022620-mRNA-1:cds;Parent=Msa1022620-mRNA-1 |
| chr7_1 | CDS | 49199820 | 49200029 | 49199820 | ID=Msa1022620-mRNA-1:cds;Parent=Msa1022620-mRNA-1 |
| chr7_1 | CDS | 49199530 | 49199721 | 49199530 | ID=Msa1022620-mRNA-1:cds;Parent=Msa1022620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
