Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027510 | AAX47171.2 | 100.000 | 61 | 0 | 0 | 1 | 61 | 1 | 61 | 1.44e-35 | 129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027510 | sp|Q38838|AGL14_ARATH | 96.721 | 61 | 2 | 0 | 1 | 61 | 1 | 61 | 6.14e-36 | 123 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027510 | Q52ZI9 | 100.000 | 61 | 0 | 0 | 1 | 61 | 1 | 61 | 6.88e-36 | 129 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1027510 | TF | MADS-M-type |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027510 | MtrunA17_Chr7g0246431 | 100.000 | 61 | 0 | 0 | 1 | 61 | 1 | 61 | 1.34e-39 | 129 |
| Msa1027510 | MtrunA17_Chr8g0351041 | 95.000 | 60 | 3 | 0 | 1 | 60 | 1 | 60 | 2.77e-37 | 122 |
| Msa1027510 | MtrunA17_Chr8g0351031 | 93.443 | 61 | 4 | 0 | 1 | 61 | 1 | 61 | 6.40e-37 | 123 |
| Msa1027510 | MtrunA17_Chr4g0057151 | 90.000 | 60 | 6 | 0 | 1 | 60 | 1 | 60 | 3.57e-33 | 112 |
| Msa1027510 | MtrunA17_Chr7g0246381 | 67.143 | 70 | 23 | 0 | 1 | 70 | 1 | 70 | 2.19e-29 | 99.4 |
| Msa1027510 | MtrunA17_Chr4g0061671 | 79.032 | 62 | 12 | 1 | 1 | 61 | 1 | 62 | 3.33e-29 | 102 |
| Msa1027510 | MtrunA17_Chr8g0351051 | 81.356 | 59 | 11 | 0 | 1 | 59 | 1 | 59 | 2.57e-28 | 101 |
| Msa1027510 | MtrunA17_Chr3g0077501 | 76.667 | 60 | 14 | 0 | 1 | 60 | 1 | 60 | 2.72e-28 | 100 |
| Msa1027510 | MtrunA17_Chr8g0377561 | 80.702 | 57 | 11 | 0 | 1 | 57 | 1 | 57 | 2.93e-28 | 97.4 |
| Msa1027510 | MtrunA17_Chr7g0220111 | 75.806 | 62 | 15 | 0 | 1 | 62 | 1 | 62 | 4.13e-28 | 101 |
| Msa1027510 | MtrunA17_Chr6g0455511 | 69.333 | 75 | 17 | 1 | 1 | 69 | 1 | 75 | 4.35e-28 | 101 |
| Msa1027510 | MtrunA17_Chr5g0420091 | 77.966 | 59 | 13 | 0 | 1 | 59 | 1 | 59 | 6.39e-28 | 99.8 |
| Msa1027510 | MtrunA17_Chr3g0122251 | 76.667 | 60 | 14 | 0 | 1 | 60 | 1 | 60 | 1.98e-27 | 99.4 |
| Msa1027510 | MtrunA17_Chr1g0173161 | 76.667 | 60 | 14 | 0 | 1 | 60 | 1 | 60 | 2.09e-27 | 94.7 |
| Msa1027510 | MtrunA17_Chr3g0097101 | 71.429 | 63 | 18 | 0 | 1 | 63 | 16 | 78 | 2.28e-27 | 99.0 |
| Msa1027510 | MtrunA17_Chr2g0308251 | 74.576 | 59 | 15 | 0 | 1 | 59 | 1 | 59 | 4.63e-27 | 94.0 |
| Msa1027510 | MtrunA17_Chr2g0284911 | 75.862 | 58 | 14 | 0 | 3 | 60 | 18 | 75 | 5.56e-27 | 98.6 |
| Msa1027510 | MtrunA17_Chr8g0380021 | 75.862 | 58 | 14 | 0 | 3 | 60 | 19 | 76 | 5.97e-27 | 98.2 |
| Msa1027510 | MtrunA17_Chr5g0427921 | 70.000 | 60 | 18 | 0 | 1 | 60 | 1 | 60 | 1.78e-26 | 91.7 |
| Msa1027510 | MtrunA17_Chr4g0020221 | 75.000 | 64 | 16 | 0 | 1 | 64 | 1 | 64 | 1.93e-26 | 97.1 |
| Msa1027510 | MtrunA17_Chr6g0474371 | 72.581 | 62 | 17 | 0 | 1 | 62 | 1 | 62 | 2.23e-26 | 95.1 |
| Msa1027510 | MtrunA17_Chr2g0279821 | 72.131 | 61 | 17 | 0 | 1 | 61 | 1 | 61 | 3.40e-26 | 95.9 |
| Msa1027510 | MtrunA17_Chr4g0061691 | 75.000 | 60 | 15 | 0 | 1 | 60 | 1 | 60 | 7.18e-26 | 95.1 |
| Msa1027510 | MtrunA17_Chr8g0366231 | 70.968 | 62 | 17 | 1 | 1 | 61 | 1 | 62 | 6.16e-25 | 92.8 |
| Msa1027510 | MtrunA17_Chr1g0204111 | 73.333 | 60 | 16 | 0 | 1 | 60 | 17 | 76 | 1.76e-24 | 91.7 |
| Msa1027510 | MtrunA17_Chr5g0412271 | 72.881 | 59 | 16 | 0 | 1 | 59 | 1 | 59 | 2.02e-24 | 91.3 |
| Msa1027510 | MtrunA17_Chr5g0412461 | 72.881 | 59 | 16 | 0 | 1 | 59 | 1 | 59 | 2.56e-24 | 90.9 |
| Msa1027510 | MtrunA17_Chr7g0220121 | 71.667 | 60 | 17 | 0 | 1 | 60 | 1 | 60 | 2.95e-24 | 91.3 |
| Msa1027510 | MtrunA17_Chr4g0018421 | 69.492 | 59 | 18 | 0 | 1 | 59 | 1 | 59 | 7.77e-24 | 89.0 |
| Msa1027510 | MtrunA17_Chr5g0427401 | 68.333 | 60 | 19 | 0 | 1 | 60 | 1 | 60 | 9.07e-24 | 89.4 |
| Msa1027510 | MtrunA17_Chr3g0142191 | 67.213 | 61 | 20 | 0 | 1 | 61 | 1 | 61 | 1.59e-23 | 89.0 |
| Msa1027510 | MtrunA17_Chr5g0425191 | 67.241 | 58 | 19 | 0 | 1 | 58 | 1 | 58 | 6.49e-23 | 84.0 |
| Msa1027510 | MtrunA17_Chr4g0049541 | 67.213 | 61 | 20 | 0 | 1 | 61 | 1 | 61 | 8.78e-23 | 86.7 |
| Msa1027510 | MtrunA17_Chr5g0411691 | 65.000 | 60 | 21 | 0 | 1 | 60 | 1 | 60 | 1.87e-22 | 86.3 |
| Msa1027510 | MtrunA17_Chr3g0125241 | 62.712 | 59 | 22 | 0 | 1 | 59 | 26 | 84 | 2.36e-22 | 85.1 |
| Msa1027510 | MtrunA17_Chr4g0044071 | 63.793 | 58 | 21 | 0 | 1 | 58 | 1 | 58 | 2.85e-22 | 82.8 |
| Msa1027510 | MtrunA17_Chr5g0420081 | 60.759 | 79 | 25 | 2 | 1 | 73 | 1 | 79 | 7.98e-22 | 84.3 |
| Msa1027510 | MtrunA17_Chr1g0159661 | 59.322 | 59 | 24 | 0 | 1 | 59 | 1 | 59 | 1.84e-21 | 82.4 |
| Msa1027510 | MtrunA17_Chr4g0049901 | 62.295 | 61 | 23 | 0 | 1 | 61 | 27 | 87 | 3.55e-21 | 82.8 |
| Msa1027510 | MtrunA17_Chr1g0164791 | 61.905 | 63 | 24 | 0 | 1 | 63 | 1 | 63 | 3.57e-21 | 82.8 |
| Msa1027510 | MtrunA17_Chr5g0404951 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 6.78e-21 | 82.0 |
| Msa1027510 | MtrunA17_Chr1g0166611 | 62.295 | 61 | 23 | 0 | 13 | 73 | 17 | 77 | 7.06e-21 | 79.7 |
| Msa1027510 | MtrunA17_Chr3g0134451 | 66.667 | 60 | 20 | 0 | 1 | 60 | 1 | 60 | 2.94e-20 | 81.6 |
| Msa1027510 | MtrunA17_Chr1g0208581 | 57.143 | 56 | 24 | 0 | 3 | 58 | 10 | 65 | 4.44e-17 | 72.0 |
| Msa1027510 | MtrunA17_Chr2g0292791 | 60.000 | 55 | 22 | 0 | 3 | 57 | 10 | 64 | 9.19e-17 | 71.2 |
| Msa1027510 | MtrunA17_Chr5g0417661 | 45.205 | 73 | 36 | 1 | 1 | 73 | 56 | 124 | 9.94e-17 | 68.9 |
| Msa1027510 | MtrunA17_Chr1g0175611 | 53.448 | 58 | 27 | 0 | 1 | 58 | 1 | 58 | 1.60e-16 | 69.3 |
| Msa1027510 | MtrunA17_Chr8g0376821 | 53.448 | 58 | 27 | 0 | 1 | 58 | 1 | 58 | 1.85e-16 | 69.3 |
| Msa1027510 | MtrunA17_Chr3g0089141 | 56.364 | 55 | 24 | 0 | 3 | 57 | 10 | 64 | 2.37e-16 | 70.1 |
| Msa1027510 | MtrunA17_Chr1g0208561 | 55.357 | 56 | 25 | 0 | 3 | 58 | 10 | 65 | 2.55e-16 | 70.1 |
| Msa1027510 | MtrunA17_Chr1g0180591 | 51.724 | 58 | 28 | 0 | 1 | 58 | 1 | 58 | 3.53e-16 | 68.6 |
| Msa1027510 | MtrunA17_Chr1g0169761 | 54.386 | 57 | 26 | 0 | 1 | 57 | 1 | 57 | 3.84e-16 | 68.6 |
| Msa1027510 | MtrunA17_Chr8g0379021 | 56.364 | 55 | 24 | 0 | 3 | 57 | 13 | 67 | 3.95e-16 | 68.6 |
| Msa1027510 | MtrunA17_Chr1g0175601 | 54.386 | 57 | 26 | 0 | 1 | 57 | 1 | 57 | 6.00e-16 | 68.2 |
| Msa1027510 | MtrunA17_Chr1g0149391 | 50.000 | 72 | 36 | 0 | 3 | 74 | 10 | 81 | 7.30e-16 | 68.9 |
| Msa1027510 | MtrunA17_Chr5g0422421 | 61.818 | 55 | 21 | 0 | 3 | 57 | 10 | 64 | 8.54e-16 | 68.6 |
| Msa1027510 | MtrunA17_Chr8g0357771 | 54.386 | 57 | 26 | 0 | 1 | 57 | 1 | 57 | 1.25e-15 | 67.4 |
| Msa1027510 | MtrunA17_Chr3g0099411 | 56.364 | 55 | 24 | 0 | 3 | 57 | 10 | 64 | 1.48e-15 | 67.8 |
| Msa1027510 | MtrunA17_Chr2g0317481 | 58.182 | 55 | 23 | 0 | 3 | 57 | 10 | 64 | 2.10e-15 | 67.8 |
| Msa1027510 | MtrunA17_Chr3g0099421 | 58.182 | 55 | 23 | 0 | 3 | 57 | 35 | 89 | 2.14e-15 | 67.8 |
| Msa1027510 | MtrunA17_Chr2g0333981 | 54.386 | 57 | 26 | 0 | 1 | 57 | 11 | 67 | 2.24e-15 | 66.6 |
| Msa1027510 | MtrunA17_Chr4g0018951 | 68.182 | 44 | 14 | 0 | 14 | 57 | 24 | 67 | 2.41e-15 | 66.2 |
| Msa1027510 | MtrunA17_Chr2g0317451 | 58.182 | 55 | 23 | 0 | 3 | 57 | 10 | 64 | 2.45e-15 | 67.4 |
| Msa1027510 | MtrunA17_Chr8g0355091 | 55.357 | 56 | 25 | 0 | 3 | 58 | 10 | 65 | 2.67e-15 | 67.4 |
| Msa1027510 | MtrunA17_Chr1g0206701 | 55.357 | 56 | 25 | 0 | 3 | 58 | 10 | 65 | 2.90e-15 | 67.4 |
| Msa1027510 | MtrunA17_Chr1g0206721 | 56.364 | 55 | 24 | 0 | 3 | 57 | 10 | 64 | 2.99e-15 | 67.4 |
| Msa1027510 | MtrunA17_Chr5g0419601 | 60.000 | 55 | 22 | 0 | 3 | 57 | 10 | 64 | 3.08e-15 | 67.4 |
| Msa1027510 | MtrunA17_Chr1g0187361 | 56.364 | 55 | 24 | 0 | 3 | 57 | 10 | 64 | 3.08e-15 | 67.4 |
| Msa1027510 | MtrunA17_Chr4g0074101 | 50.877 | 57 | 28 | 0 | 1 | 57 | 1 | 57 | 3.43e-15 | 66.6 |
| Msa1027510 | MtrunA17_Chr1g0188671 | 56.364 | 55 | 24 | 0 | 3 | 57 | 48 | 102 | 3.60e-15 | 67.4 |
| Msa1027510 | MtrunA17_Chr4g0052061 | 47.541 | 61 | 32 | 0 | 1 | 61 | 1 | 61 | 5.05e-15 | 65.1 |
| Msa1027510 | MtrunA17_Chr4g0052081 | 49.153 | 59 | 30 | 0 | 1 | 59 | 1 | 59 | 7.99e-15 | 65.1 |
| Msa1027510 | MtrunA17_Chr5g0422941 | 58.182 | 55 | 23 | 0 | 3 | 57 | 10 | 64 | 9.60e-15 | 65.9 |
| Msa1027510 | MtrunA17_Chr2g0300421 | 51.786 | 56 | 27 | 0 | 3 | 58 | 10 | 65 | 1.22e-14 | 64.7 |
| Msa1027510 | MtrunA17_Chr2g0325971 | 54.545 | 55 | 25 | 0 | 3 | 57 | 10 | 64 | 1.55e-14 | 65.1 |
| Msa1027510 | MtrunA17_Chr3g0111841 | 58.000 | 50 | 21 | 0 | 8 | 57 | 2 | 51 | 1.89e-14 | 61.6 |
| Msa1027510 | MtrunA17_Chr1g0206991 | 52.727 | 55 | 26 | 0 | 3 | 57 | 10 | 64 | 2.02e-14 | 64.3 |
| Msa1027510 | MtrunA17_Chr4g0060841 | 52.830 | 53 | 25 | 0 | 1 | 53 | 1 | 53 | 6.15e-14 | 64.7 |
| Msa1027510 | MtrunA17_Chr8g0356071 | 47.368 | 57 | 30 | 0 | 1 | 57 | 1 | 57 | 4.41e-13 | 60.5 |
| Msa1027510 | MtrunA17_Chr2g0300441 | 50.943 | 53 | 26 | 0 | 5 | 57 | 12 | 64 | 7.17e-13 | 60.8 |
| Msa1027510 | MtrunA17_Chr3g0089151 | 49.091 | 55 | 28 | 0 | 3 | 57 | 10 | 64 | 1.44e-12 | 58.2 |
| Msa1027510 | MtrunA17_Chr3g0119901 | 49.091 | 55 | 28 | 0 | 3 | 57 | 10 | 64 | 1.72e-12 | 59.7 |
| Msa1027510 | MtrunA17_Chr1g0187351 | 55.319 | 47 | 21 | 0 | 11 | 57 | 1 | 47 | 2.00e-12 | 56.6 |
| Msa1027510 | MtrunA17_Chr3g0085241 | 49.091 | 55 | 28 | 0 | 3 | 57 | 42 | 96 | 4.79e-12 | 58.9 |
| Msa1027510 | MtrunA17_Chr4g0071601 | 60.465 | 43 | 17 | 0 | 15 | 57 | 25 | 67 | 5.06e-12 | 58.2 |
| Msa1027510 | MtrunA17_Chr1g0206691 | 54.167 | 48 | 22 | 0 | 11 | 58 | 1 | 48 | 5.14e-12 | 58.5 |
| Msa1027510 | MtrunA17_Chr6g0457851 | 48.000 | 50 | 26 | 0 | 1 | 50 | 11 | 60 | 1.84e-11 | 57.8 |
| Msa1027510 | MtrunA17_Chr6g0449851 | 48.000 | 50 | 26 | 0 | 1 | 50 | 1 | 50 | 5.32e-11 | 56.2 |
| Msa1027510 | MtrunA17_Chr8g0345001 | 49.057 | 53 | 27 | 0 | 3 | 55 | 19 | 71 | 7.82e-11 | 54.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027510 | AT4G11880.2 | 98.333 | 60 | 1 | 0 | 1 | 60 | 1 | 60 | 2.18e-37 | 123 |
| Msa1027510 | AT4G11880.3 | 98.333 | 60 | 1 | 0 | 1 | 60 | 1 | 60 | 2.18e-37 | 123 |
| Msa1027510 | AT2G45660.2 | 84.507 | 71 | 6 | 1 | 1 | 71 | 1 | 66 | 2.29e-37 | 122 |
| Msa1027510 | AT4G11880.4 | 96.721 | 61 | 2 | 0 | 1 | 61 | 1 | 61 | 6.24e-37 | 123 |
| Msa1027510 | AT4G11880.1 | 96.721 | 61 | 2 | 0 | 1 | 61 | 1 | 61 | 6.24e-37 | 123 |
| Msa1027510 | AT2G45660.1 | 84.507 | 71 | 6 | 1 | 1 | 71 | 1 | 66 | 1.16e-36 | 122 |
| Msa1027510 | AT4G22950.2 | 95.000 | 60 | 3 | 0 | 1 | 60 | 1 | 60 | 1.81e-36 | 120 |
| Msa1027510 | AT4G22950.3 | 93.443 | 61 | 4 | 0 | 1 | 61 | 1 | 61 | 1.13e-35 | 120 |
| Msa1027510 | AT4G22950.1 | 93.443 | 61 | 4 | 0 | 1 | 61 | 1 | 61 | 1.13e-35 | 120 |
| Msa1027510 | AT5G62165.6 | 85.000 | 60 | 9 | 0 | 1 | 60 | 1 | 60 | 1.08e-32 | 110 |
| Msa1027510 | AT5G62165.9 | 85.000 | 60 | 9 | 0 | 1 | 60 | 1 | 60 | 1.08e-32 | 110 |
| Msa1027510 | AT5G62165.7 | 85.000 | 60 | 9 | 0 | 1 | 60 | 1 | 60 | 1.08e-32 | 110 |
| Msa1027510 | AT5G62165.8 | 85.000 | 60 | 9 | 0 | 1 | 60 | 1 | 60 | 1.08e-32 | 110 |
| Msa1027510 | AT5G62165.13 | 85.000 | 60 | 9 | 0 | 1 | 60 | 1 | 60 | 1.08e-32 | 110 |
| Msa1027510 | AT5G62165.14 | 85.000 | 60 | 9 | 0 | 1 | 60 | 1 | 60 | 1.22e-32 | 108 |
| Msa1027510 | AT5G62165.17 | 85.000 | 60 | 9 | 0 | 1 | 60 | 1 | 60 | 1.28e-32 | 110 |
| Msa1027510 | AT5G62165.12 | 85.000 | 60 | 9 | 0 | 1 | 60 | 1 | 60 | 1.28e-32 | 110 |
| Msa1027510 | AT5G62165.11 | 85.000 | 60 | 9 | 0 | 1 | 60 | 1 | 60 | 1.28e-32 | 110 |
| Msa1027510 | AT5G62165.10 | 85.000 | 60 | 9 | 0 | 1 | 60 | 1 | 60 | 7.25e-32 | 109 |
| Msa1027510 | AT5G62165.4 | 85.000 | 60 | 9 | 0 | 1 | 60 | 1 | 60 | 7.25e-32 | 109 |
| Msa1027510 | AT5G62165.3 | 85.000 | 60 | 9 | 0 | 1 | 60 | 1 | 60 | 7.36e-32 | 110 |
| Msa1027510 | AT5G62165.1 | 85.000 | 60 | 9 | 0 | 1 | 60 | 1 | 60 | 7.36e-32 | 110 |
| Msa1027510 | AT5G62165.2 | 85.000 | 60 | 9 | 0 | 1 | 60 | 1 | 60 | 7.36e-32 | 110 |
| Msa1027510 | AT2G45650.1 | 83.051 | 59 | 10 | 0 | 1 | 59 | 1 | 59 | 1.35e-28 | 102 |
| Msa1027510 | AT2G03710.3 | 78.333 | 60 | 13 | 0 | 1 | 60 | 1 | 60 | 1.42e-28 | 101 |
| Msa1027510 | AT4G09960.2 | 75.000 | 60 | 15 | 0 | 1 | 60 | 1 | 60 | 2.75e-28 | 101 |
| Msa1027510 | AT4G09960.6 | 75.000 | 60 | 15 | 0 | 1 | 60 | 2 | 61 | 3.46e-28 | 101 |
| Msa1027510 | AT4G09960.1 | 75.000 | 60 | 15 | 0 | 1 | 60 | 1 | 60 | 3.57e-28 | 101 |
| Msa1027510 | AT5G15800.1 | 77.419 | 62 | 14 | 0 | 1 | 62 | 1 | 62 | 3.99e-28 | 101 |
| Msa1027510 | AT4G09960.5 | 75.000 | 60 | 15 | 0 | 1 | 60 | 11 | 70 | 4.98e-28 | 100 |
| Msa1027510 | AT1G24260.3 | 80.000 | 60 | 12 | 0 | 1 | 60 | 1 | 60 | 6.11e-28 | 100 |
| Msa1027510 | AT2G03710.2 | 78.333 | 60 | 13 | 0 | 1 | 60 | 1 | 60 | 7.06e-28 | 100 |
| Msa1027510 | AT5G15800.2 | 77.419 | 62 | 14 | 0 | 1 | 62 | 1 | 62 | 7.39e-28 | 101 |
| Msa1027510 | AT1G24260.1 | 80.000 | 60 | 12 | 0 | 1 | 60 | 1 | 60 | 7.60e-28 | 100 |
| Msa1027510 | AT2G03710.1 | 78.333 | 60 | 13 | 0 | 1 | 60 | 1 | 60 | 7.60e-28 | 100 |
| Msa1027510 | AT1G24260.2 | 80.000 | 60 | 12 | 0 | 1 | 60 | 1 | 60 | 7.67e-28 | 100 |
| Msa1027510 | AT4G09960.3 | 75.000 | 60 | 15 | 0 | 1 | 60 | 27 | 86 | 9.75e-28 | 100 |
| Msa1027510 | AT4G18960.1 | 76.271 | 59 | 14 | 0 | 3 | 61 | 19 | 77 | 2.46e-27 | 99.8 |
| Msa1027510 | AT3G02310.2 | 72.581 | 62 | 17 | 0 | 1 | 62 | 1 | 62 | 2.95e-27 | 98.2 |
| Msa1027510 | AT4G09960.4 | 75.000 | 60 | 15 | 0 | 1 | 60 | 96 | 155 | 3.17e-27 | 100 |
| Msa1027510 | AT2G42830.2 | 73.770 | 61 | 16 | 0 | 3 | 63 | 18 | 78 | 3.23e-27 | 99.0 |
| Msa1027510 | AT2G42830.1 | 73.770 | 61 | 16 | 0 | 3 | 63 | 18 | 78 | 3.42e-27 | 99.0 |
| Msa1027510 | AT3G58780.1 | 73.770 | 61 | 16 | 0 | 3 | 63 | 18 | 78 | 4.96e-27 | 98.6 |
| Msa1027510 | AT3G58780.5 | 73.770 | 61 | 16 | 0 | 3 | 63 | 24 | 84 | 5.64e-27 | 98.6 |
| Msa1027510 | AT3G58780.2 | 75.862 | 58 | 14 | 0 | 3 | 60 | 18 | 75 | 6.32e-27 | 98.2 |
| Msa1027510 | AT3G58780.4 | 73.770 | 61 | 16 | 0 | 3 | 63 | 18 | 78 | 9.03e-27 | 98.6 |
| Msa1027510 | AT3G57390.3 | 73.770 | 61 | 16 | 0 | 1 | 61 | 1 | 61 | 1.07e-26 | 97.4 |
| Msa1027510 | AT5G51860.2 | 75.000 | 60 | 15 | 0 | 1 | 60 | 1 | 60 | 1.08e-26 | 96.7 |
| Msa1027510 | AT3G58780.3 | 75.862 | 58 | 14 | 0 | 3 | 60 | 18 | 75 | 1.15e-26 | 98.2 |
| Msa1027510 | AT3G57230.2 | 73.770 | 61 | 16 | 0 | 1 | 61 | 1 | 61 | 1.32e-26 | 94.7 |
| Msa1027510 | AT5G51860.1 | 75.000 | 60 | 15 | 0 | 1 | 60 | 1 | 60 | 1.40e-26 | 96.7 |
| Msa1027510 | AT3G57390.1 | 73.770 | 61 | 16 | 0 | 1 | 61 | 1 | 61 | 2.16e-26 | 97.1 |
| Msa1027510 | AT5G51870.2 | 73.333 | 60 | 16 | 0 | 1 | 60 | 1 | 60 | 2.88e-26 | 94.7 |
| Msa1027510 | AT3G57230.1 | 73.770 | 61 | 16 | 0 | 1 | 61 | 1 | 61 | 4.35e-26 | 95.9 |
| Msa1027510 | AT3G57230.4 | 73.770 | 61 | 16 | 0 | 1 | 61 | 1 | 61 | 4.35e-26 | 95.9 |
| Msa1027510 | AT3G02310.1 | 72.581 | 62 | 17 | 0 | 1 | 62 | 1 | 62 | 6.92e-26 | 95.9 |
| Msa1027510 | AT5G13790.1 | 76.667 | 60 | 14 | 0 | 1 | 60 | 1 | 60 | 7.49e-26 | 95.9 |
| Msa1027510 | AT5G13790.2 | 76.667 | 60 | 14 | 0 | 1 | 60 | 1 | 60 | 7.57e-26 | 96.3 |
| Msa1027510 | AT5G51870.1 | 73.333 | 60 | 16 | 0 | 1 | 60 | 1 | 60 | 7.75e-26 | 94.7 |
| Msa1027510 | AT5G51870.5 | 73.333 | 60 | 16 | 0 | 1 | 60 | 24 | 83 | 8.33e-26 | 94.4 |
| Msa1027510 | AT3G61120.1 | 76.271 | 59 | 14 | 0 | 1 | 59 | 1 | 59 | 8.85e-26 | 95.5 |
| Msa1027510 | AT5G60910.1 | 70.769 | 65 | 18 | 1 | 1 | 64 | 1 | 65 | 1.39e-25 | 94.7 |
| Msa1027510 | AT5G51870.4 | 73.333 | 60 | 16 | 0 | 1 | 60 | 1 | 60 | 1.65e-25 | 94.0 |
| Msa1027510 | AT5G51870.3 | 73.333 | 60 | 16 | 0 | 1 | 60 | 11 | 70 | 2.39e-25 | 94.0 |
| Msa1027510 | AT1G69120.2 | 70.968 | 62 | 17 | 1 | 1 | 61 | 1 | 62 | 3.65e-25 | 93.6 |
| Msa1027510 | AT3G30260.1 | 70.000 | 60 | 18 | 0 | 1 | 60 | 1 | 60 | 5.50e-25 | 93.6 |
| Msa1027510 | AT1G69120.1 | 70.968 | 62 | 17 | 1 | 1 | 61 | 1 | 62 | 9.78e-25 | 92.8 |
| Msa1027510 | AT1G71692.1 | 69.492 | 59 | 18 | 0 | 1 | 59 | 1 | 59 | 1.58e-24 | 91.3 |
| Msa1027510 | AT1G26310.1 | 70.968 | 62 | 17 | 1 | 1 | 61 | 1 | 62 | 2.35e-24 | 92.0 |
| Msa1027510 | AT2G22540.3 | 73.333 | 60 | 16 | 0 | 1 | 60 | 1 | 60 | 4.31e-24 | 90.9 |
| Msa1027510 | AT2G22540.1 | 73.333 | 60 | 16 | 0 | 1 | 60 | 1 | 60 | 4.31e-24 | 90.9 |
| Msa1027510 | AT4G37940.4 | 68.852 | 61 | 19 | 0 | 1 | 61 | 1 | 61 | 4.98e-24 | 90.1 |
| Msa1027510 | AT4G37940.1 | 68.852 | 61 | 19 | 0 | 1 | 61 | 1 | 61 | 5.46e-24 | 90.5 |
| Msa1027510 | AT4G37940.3 | 70.000 | 60 | 18 | 0 | 1 | 60 | 1 | 60 | 6.01e-24 | 89.0 |
| Msa1027510 | AT2G14210.1 | 68.852 | 61 | 19 | 0 | 1 | 61 | 1 | 61 | 6.28e-24 | 90.5 |
| Msa1027510 | AT2G14210.2 | 70.000 | 60 | 18 | 0 | 1 | 60 | 1 | 60 | 7.27e-24 | 90.1 |
| Msa1027510 | AT4G24540.1 | 71.667 | 60 | 17 | 0 | 1 | 60 | 1 | 60 | 2.18e-23 | 88.6 |
| Msa1027510 | AT5G10140.2 | 69.492 | 59 | 18 | 0 | 1 | 59 | 1 | 59 | 1.01e-22 | 85.5 |
| Msa1027510 | AT5G10140.4 | 69.492 | 59 | 18 | 0 | 1 | 59 | 1 | 59 | 1.47e-22 | 85.5 |
| Msa1027510 | AT5G10140.3 | 69.492 | 59 | 18 | 0 | 1 | 59 | 1 | 59 | 1.79e-22 | 85.5 |
| Msa1027510 | AT5G10140.1 | 69.492 | 59 | 18 | 0 | 1 | 59 | 1 | 59 | 1.90e-22 | 85.5 |
| Msa1027510 | AT2G22540.2 | 65.079 | 63 | 22 | 0 | 1 | 63 | 1 | 63 | 2.43e-22 | 86.3 |
| Msa1027510 | AT5G20240.2 | 66.667 | 57 | 19 | 0 | 1 | 57 | 1 | 57 | 7.20e-22 | 82.8 |
| Msa1027510 | AT2G22630.1 | 65.574 | 61 | 21 | 0 | 1 | 61 | 1 | 61 | 8.03e-22 | 84.7 |
| Msa1027510 | AT2G22630.2 | 65.574 | 61 | 21 | 0 | 1 | 61 | 1 | 61 | 8.03e-22 | 84.7 |
| Msa1027510 | AT5G20240.1 | 66.667 | 57 | 19 | 0 | 1 | 57 | 1 | 57 | 2.77e-21 | 82.8 |
| Msa1027510 | AT5G23260.3 | 63.492 | 63 | 23 | 0 | 1 | 63 | 1 | 63 | 4.42e-21 | 83.2 |
| Msa1027510 | AT5G23260.2 | 63.492 | 63 | 23 | 0 | 1 | 63 | 1 | 63 | 9.16e-21 | 82.4 |
| Msa1027510 | AT5G65070.4 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 9.95e-21 | 80.1 |
| Msa1027510 | AT3G54340.1 | 67.797 | 59 | 19 | 0 | 1 | 59 | 1 | 59 | 1.41e-20 | 81.6 |
| Msa1027510 | AT5G23260.1 | 63.492 | 63 | 23 | 0 | 1 | 63 | 17 | 79 | 2.08e-20 | 81.6 |
| Msa1027510 | AT5G23260.4 | 63.492 | 63 | 23 | 0 | 1 | 63 | 17 | 79 | 2.28e-20 | 81.6 |
| Msa1027510 | AT5G65070.1 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 3.33e-20 | 80.1 |
| Msa1027510 | AT1G22130.1 | 67.241 | 58 | 19 | 0 | 1 | 58 | 1 | 58 | 3.79e-20 | 82.0 |
| Msa1027510 | AT1G77980.1 | 65.517 | 58 | 20 | 0 | 1 | 58 | 1 | 58 | 5.92e-20 | 81.3 |
| Msa1027510 | AT5G65070.5 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 6.82e-20 | 79.3 |
| Msa1027510 | AT5G65070.2 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 8.17e-20 | 79.7 |
| Msa1027510 | AT5G65070.3 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 1.23e-19 | 79.0 |
| Msa1027510 | AT5G65050.2 | 57.627 | 59 | 25 | 0 | 1 | 59 | 1 | 59 | 6.41e-19 | 76.3 |
| Msa1027510 | AT5G65050.1 | 47.561 | 82 | 36 | 2 | 1 | 76 | 1 | 81 | 1.33e-18 | 75.5 |
| Msa1027510 | AT5G65050.5 | 47.561 | 82 | 36 | 2 | 1 | 76 | 1 | 81 | 1.48e-18 | 75.5 |
| Msa1027510 | AT5G65050.3 | 47.561 | 82 | 36 | 2 | 1 | 76 | 1 | 81 | 1.63e-18 | 75.5 |
| Msa1027510 | AT1G77950.3 | 58.621 | 58 | 24 | 0 | 1 | 58 | 1 | 58 | 7.36e-18 | 74.7 |
| Msa1027510 | AT1G77950.2 | 58.621 | 58 | 24 | 0 | 1 | 58 | 1 | 58 | 7.36e-18 | 74.7 |
| Msa1027510 | AT1G77950.1 | 58.621 | 58 | 24 | 0 | 1 | 58 | 1 | 58 | 7.36e-18 | 74.7 |
| Msa1027510 | AT1G77950.4 | 58.621 | 58 | 24 | 0 | 1 | 58 | 1 | 58 | 7.36e-18 | 74.7 |
| Msa1027510 | AT5G65080.2 | 61.905 | 63 | 23 | 1 | 1 | 63 | 8 | 69 | 9.26e-18 | 73.6 |
| Msa1027510 | AT4G37435.1 | 59.649 | 57 | 23 | 0 | 1 | 57 | 1 | 57 | 2.15e-17 | 72.4 |
| Msa1027510 | AT5G65080.3 | 61.017 | 59 | 23 | 0 | 1 | 59 | 8 | 66 | 2.84e-17 | 72.0 |
| Msa1027510 | AT5G65060.3 | 55.932 | 59 | 26 | 0 | 1 | 59 | 1 | 59 | 3.82e-17 | 71.6 |
| Msa1027510 | AT1G31140.2 | 50.746 | 67 | 33 | 0 | 1 | 67 | 1 | 67 | 4.67e-17 | 72.0 |
| Msa1027510 | AT5G65060.2 | 55.932 | 59 | 26 | 0 | 1 | 59 | 1 | 59 | 4.77e-17 | 71.2 |
| Msa1027510 | AT1G31140.1 | 50.746 | 67 | 33 | 0 | 1 | 67 | 1 | 67 | 4.92e-17 | 72.0 |
| Msa1027510 | AT5G65060.1 | 55.932 | 59 | 26 | 0 | 1 | 59 | 1 | 59 | 5.02e-17 | 71.6 |
| Msa1027510 | AT3G66656.1 | 52.632 | 57 | 27 | 0 | 1 | 57 | 1 | 57 | 5.49e-16 | 68.6 |
| Msa1027510 | AT1G01530.1 | 56.364 | 55 | 24 | 0 | 3 | 57 | 8 | 62 | 7.06e-16 | 69.3 |
| Msa1027510 | AT1G77080.5 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 8.91e-16 | 67.8 |
| Msa1027510 | AT1G77080.11 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 1.01e-15 | 67.8 |
| Msa1027510 | AT1G18750.4 | 52.632 | 57 | 27 | 0 | 1 | 57 | 1 | 57 | 1.12e-15 | 70.1 |
| Msa1027510 | AT1G18750.1 | 52.632 | 57 | 27 | 0 | 1 | 57 | 1 | 57 | 1.17e-15 | 70.1 |
| Msa1027510 | AT1G18750.3 | 52.632 | 57 | 27 | 0 | 1 | 57 | 1 | 57 | 1.19e-15 | 70.1 |
| Msa1027510 | AT2G34440.1 | 50.000 | 58 | 29 | 0 | 1 | 58 | 1 | 58 | 1.33e-15 | 67.4 |
| Msa1027510 | AT1G77080.4 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 1.96e-15 | 67.4 |
| Msa1027510 | AT4G36590.1 | 58.182 | 55 | 23 | 0 | 3 | 57 | 8 | 62 | 4.10e-15 | 67.4 |
| Msa1027510 | AT1G77080.8 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 5.36e-15 | 66.6 |
| Msa1027510 | AT2G03060.3 | 46.479 | 71 | 35 | 1 | 1 | 71 | 1 | 68 | 6.84e-15 | 67.8 |
| Msa1027510 | AT2G03060.7 | 46.479 | 71 | 35 | 1 | 1 | 71 | 1 | 68 | 6.84e-15 | 67.8 |
| Msa1027510 | AT2G03060.1 | 46.479 | 71 | 35 | 1 | 1 | 71 | 1 | 68 | 6.84e-15 | 67.8 |
| Msa1027510 | AT1G77080.12 | 61.017 | 59 | 23 | 0 | 1 | 59 | 1 | 59 | 7.38e-15 | 65.1 |
| Msa1027510 | AT2G03060.2 | 46.479 | 71 | 35 | 1 | 1 | 71 | 1 | 68 | 1.02e-14 | 67.4 |
| Msa1027510 | AT1G77080.2 | 61.017 | 59 | 23 | 0 | 1 | 59 | 1 | 59 | 1.60e-14 | 65.1 |
| Msa1027510 | AT5G60440.1 | 54.545 | 55 | 25 | 0 | 3 | 57 | 8 | 62 | 2.08e-14 | 65.9 |
| Msa1027510 | AT1G69540.2 | 52.830 | 53 | 25 | 0 | 1 | 53 | 1 | 53 | 7.41e-14 | 64.7 |
| Msa1027510 | AT1G69540.1 | 52.830 | 53 | 25 | 0 | 1 | 53 | 1 | 53 | 9.28e-14 | 64.3 |
| Msa1027510 | AT2G24840.1 | 54.545 | 55 | 25 | 0 | 3 | 57 | 64 | 118 | 2.09e-13 | 63.2 |
| Msa1027510 | AT1G47760.1 | 39.506 | 81 | 44 | 1 | 1 | 76 | 1 | 81 | 2.57e-13 | 61.6 |
| Msa1027510 | AT1G65360.1 | 48.214 | 56 | 29 | 0 | 3 | 58 | 8 | 63 | 3.43e-13 | 62.0 |
| Msa1027510 | AT1G72350.1 | 54.386 | 57 | 26 | 0 | 3 | 59 | 44 | 100 | 1.14e-12 | 60.5 |
| Msa1027510 | AT3G04100.1 | 50.000 | 54 | 27 | 0 | 5 | 58 | 17 | 70 | 2.40e-12 | 59.7 |
| Msa1027510 | AT2G26320.1 | 45.763 | 59 | 32 | 0 | 1 | 59 | 17 | 75 | 1.56e-11 | 55.5 |
| Msa1027510 | AT1G28460.1 | 50.877 | 57 | 28 | 0 | 3 | 59 | 9 | 65 | 2.49e-11 | 56.6 |
| Msa1027510 | AT1G29962.1 | 53.846 | 52 | 24 | 0 | 8 | 59 | 14 | 65 | 6.13e-11 | 55.5 |
Find 12 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATAAGAGATTGAGATAA+AGG | 0.323923 | 7_1:+59936816 | None:intergenic |
| GATAGAGAAATTAATCAAAA+TGG | 0.353016 | 7_1:-59936305 | Msa1027510:intron |
| TCTGAGGTTGTGACTAGAAA+AGG | 0.371239 | 7_1:+59936767 | None:intergenic |
| TATGCATTATACTGTACGTT+TGG | 0.399774 | 7_1:-59933387 | Msa1027510:CDS |
| TTATACTGTACGTTTGGCTT+CGG | 0.410441 | 7_1:-59933381 | Msa1027510:CDS |
| ACTAGAAAAGGGAAGAAAGA+AGG | 0.495496 | 7_1:+59936779 | None:intergenic |
| CTGAGGTTGTGACTAGAAAA+GGG | 0.501914 | 7_1:+59936768 | None:intergenic |
| TACTCAAGTAGTTGTTGAGA+AGG | 0.506051 | 7_1:+59936711 | None:intergenic |
| ACTCAAGTAGTTGTTGAGAA+GGG | 0.551378 | 7_1:+59936712 | None:intergenic |
| ATAGGTGGTTGAATAAGGAA+AGG | 0.616339 | 7_1:-59936886 | None:intergenic |
| CAGTATAATGCATATTCTGA+CGG | 0.617725 | 7_1:+59933396 | None:intergenic |
| AAATTAATCAAAATGGTGAG+AGG | 0.642503 | 7_1:-59936298 | Msa1027510:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTAAAAAATAATTTA+GGG | + | chr7_1:59934163-59934182 | None:intergenic | 0.0% |
| !! | AAAAAATTAAAAAATAATTT+AGG | + | chr7_1:59934164-59934183 | None:intergenic | 0.0% |
| !! | TTATATTTAATTATAATAAT+AGG | - | chr7_1:59935430-59935449 | Msa1027510:intron | 0.0% |
| !!! | AAATTAAATATTATTTTTTT+GGG | + | chr7_1:59936041-59936060 | None:intergenic | 0.0% |
| !!! | TAAATTAAATATTATTTTTT+TGG | + | chr7_1:59936042-59936061 | None:intergenic | 0.0% |
| !! | ATTAAATTTATTTAAATTAT+AGG | - | chr7_1:59936061-59936080 | Msa1027510:intron | 0.0% |
| !!! | TAAATAATTTTAGTTTCAAA+TGG | - | chr7_1:59933730-59933749 | Msa1027510:intron | 10.0% |
| !! | TGTGTATAAATATATAAAAT+AGG | - | chr7_1:59934362-59934381 | Msa1027510:intron | 10.0% |
| !! | GTGTATAAATATATAAAATA+GGG | - | chr7_1:59934363-59934382 | Msa1027510:intron | 10.0% |
| !! | AATAATAATAATCATTTCAT+TGG | + | chr7_1:59935130-59935149 | None:intergenic | 10.0% |
| !! | AATAATAATATATAACTGTT+TGG | + | chr7_1:59935752-59935771 | None:intergenic | 10.0% |
| !!! | ATTTTCTTTTGTTCTTATTT+AGG | + | chr7_1:59933623-59933642 | None:intergenic | 15.0% |
| !! | TATATATTTATACACACATA+TGG | + | chr7_1:59934358-59934377 | None:intergenic | 15.0% |
| !! | TTGTAATTGCTATAATAATA+AGG | + | chr7_1:59935311-59935330 | None:intergenic | 15.0% |
| !! | AAAAAAGAAACAAATTTAGT+TGG | + | chr7_1:59935614-59935633 | None:intergenic | 15.0% |
| !! | ATTATTAGTTCACATTATAT+TGG | - | chr7_1:59935766-59935785 | Msa1027510:intron | 15.0% |
| !!! | TTTTTTACTGAAAATAGTAA+AGG | + | chr7_1:59935967-59935986 | None:intergenic | 15.0% |
| !!! | TCTAAACAATAACTTTTTAT+TGG | - | chr7_1:59936191-59936210 | Msa1027510:CDS | 15.0% |
| !! | TTAATAAGAGATTGAGATAA+AGG | + | chr7_1:59933436-59933455 | None:intergenic | 20.0% |
| !! | CAAAGTAGCAATATAAATTA+TGG | + | chr7_1:59933666-59933685 | None:intergenic | 20.0% |
| !! | GATAGAGAAATTAATCAAAA+TGG | - | chr7_1:59933944-59933963 | Msa1027510:intron | 20.0% |
| !!! | TCACATACTTTTATAGTTTA+TGG | + | chr7_1:59934605-59934624 | None:intergenic | 20.0% |
| !! | TACAATATTCTAATTGATTG+AGG | - | chr7_1:59934656-59934675 | Msa1027510:intron | 20.0% |
| !! | AGCAAAAATATATAGTGAAA+AGG | - | chr7_1:59934999-59935018 | Msa1027510:intron | 20.0% |
| !! | ATAATAATCATTTCATTGGT+GGG | + | chr7_1:59935126-59935145 | None:intergenic | 20.0% |
| !! | AATAATAATCATTTCATTGG+TGG | + | chr7_1:59935127-59935146 | None:intergenic | 20.0% |
| !!! | AAGTTATATATCAGTTTTGT+AGG | + | chr7_1:59935267-59935286 | None:intergenic | 20.0% |
| !! | TTCTTCTTCATATATATGTT+TGG | - | chr7_1:59935635-59935654 | Msa1027510:intron | 20.0% |
| !! | TTCAAAAGAGTTATCTAATA+TGG | - | chr7_1:59935884-59935903 | Msa1027510:intron | 20.0% |
| !!! | AAAATATTTTTGCTCTCATA+GGG | + | chr7_1:59936286-59936305 | None:intergenic | 20.0% |
| !! | GATGTTTTTCATCTTTGATT+TGG | - | chr7_1:59933792-59933811 | Msa1027510:intron | 25.0% |
| ! | AAATTAATCAAAATGGTGAG+AGG | - | chr7_1:59933951-59933970 | Msa1027510:intron | 25.0% |
| ! | ACATTCTCAAAAAGAAGAAA+TGG | - | chr7_1:59934020-59934039 | Msa1027510:intron | 25.0% |
| !! | AATTCATAAAGTTTTCCTCT+TGG | + | chr7_1:59934113-59934132 | None:intergenic | 25.0% |
| ! | ATAATTTCATGCACACTTAT+TGG | - | chr7_1:59934322-59934341 | Msa1027510:intron | 25.0% |
| ! | TCATAATTAATTAACCACAG+TGG | - | chr7_1:59934424-59934443 | Msa1027510:intron | 25.0% |
| ! | AAAATCCTGATTACTTTAAG+AGG | - | chr7_1:59934558-59934577 | Msa1027510:intron | 25.0% |
| !! | AAATCCTGATTACTTTAAGA+GGG | - | chr7_1:59934559-59934578 | Msa1027510:intron | 25.0% |
| !! | ACTTTTATAGTTTATGGCTA+GGG | + | chr7_1:59934599-59934618 | None:intergenic | 25.0% |
| !! | TACTTTTATAGTTTATGGCT+AGG | + | chr7_1:59934600-59934619 | None:intergenic | 25.0% |
| ! | AATATTCTAATTGATTGAGG+TGG | - | chr7_1:59934659-59934678 | Msa1027510:intron | 25.0% |
| !! | TGTAAACAAGTGAAGTTTTT+CGG | - | chr7_1:59934887-59934906 | Msa1027510:intron | 25.0% |
| ! | TTATTAATGAGTATCAGGAT+TGG | + | chr7_1:59934980-59934999 | None:intergenic | 25.0% |
| ! | TTTGCTTATTAATGAGTATC+AGG | + | chr7_1:59934985-59935004 | None:intergenic | 25.0% |
| ! | TCTATATATTGAGATGTCTA+AGG | - | chr7_1:59935539-59935558 | Msa1027510:intron | 25.0% |
| ! | CTATATATTGAGATGTCTAA+GGG | - | chr7_1:59935540-59935559 | Msa1027510:intron | 25.0% |
| ! | GAATTGAATATTCGGTTTAA+TGG | + | chr7_1:59935588-59935607 | None:intergenic | 25.0% |
| !!! | GTTGGTTTGAATTGAATATT+CGG | + | chr7_1:59935596-59935615 | None:intergenic | 25.0% |
| ! | ATTATTGTGTGTGTCTAATA+TGG | - | chr7_1:59935914-59935933 | Msa1027510:intron | 25.0% |
| !!! | TCATTTTGATCACTTATAAG+AGG | + | chr7_1:59935941-59935960 | None:intergenic | 25.0% |
| ! | TTAAATTATAGGTCCACATT+TGG | - | chr7_1:59936072-59936091 | Msa1027510:intron | 25.0% |
| ! | TAAATTATAGGTCCACATTT+GGG | - | chr7_1:59936073-59936092 | Msa1027510:intron | 25.0% |
| ! | GTAAATAGGACTATCTAATA+TGG | + | chr7_1:59936105-59936124 | None:intergenic | 25.0% |
| !! | GAATTTTATGATCTTTTGTC+AGG | + | chr7_1:59936168-59936187 | None:intergenic | 25.0% |
| !!! | GGTTAGTTTAATTCACTTTT+TGG | + | chr7_1:59936234-59936253 | None:intergenic | 25.0% |
| ! | GAAAAGAAATGACATCTATA+AGG | + | chr7_1:59936264-59936283 | None:intergenic | 25.0% |
| !!! | GAAAATATTTTTGCTCTCAT+AGG | + | chr7_1:59936287-59936306 | None:intergenic | 25.0% |
| ! | CCACTTATATCAGTAAATAT+GGG | + | chr7_1:59936350-59936369 | None:intergenic | 25.0% |
| ! | CCATATTTACTGATATAAGT+GGG | - | chr7_1:59936348-59936367 | Msa1027510:intron | 25.0% |
| !! | TTTTTACCGATGAAAAGTTT+AGG | + | chr7_1:59936679-59936698 | None:intergenic | 25.0% |
| ! | CAGTTCTTTTCTCTCTTTTT+GGG | - | chr7_1:59933405-59933424 | Msa1027510:CDS | 30.0% |
| ! | TCTGATTTTACACACGAAAT+TGG | + | chr7_1:59933514-59933533 | None:intergenic | 30.0% |
| ATATGAGCTAGTTCATTACA+TGG | + | chr7_1:59933842-59933861 | None:intergenic | 30.0% | |
| !! | TTTATGAATTTTCAAGCTCC+TGG | - | chr7_1:59934123-59934142 | Msa1027510:intron | 30.0% |
| ! | AGGGTATTTAATTACTTACC+AGG | + | chr7_1:59934144-59934163 | None:intergenic | 30.0% |
| CAAATGATATAGCATGAAGA+GGG | + | chr7_1:59934292-59934311 | None:intergenic | 30.0% | |
| ACAAATGATATAGCATGAAG+AGG | + | chr7_1:59934293-59934312 | None:intergenic | 30.0% | |
| !!! | ACTTTTGAGGTTACAGAAAA+AGG | + | chr7_1:59934497-59934516 | None:intergenic | 30.0% |
| TTATCCCTCTTAAAGTAATC+AGG | + | chr7_1:59934566-59934585 | None:intergenic | 30.0% | |
| TGAATATGTCTCAAGTAGTT+CGG | - | chr7_1:59934758-59934777 | Msa1027510:intron | 30.0% | |
| CTTAATTTCTTTACTAGGGT+GGG | - | chr7_1:59934911-59934930 | Msa1027510:intron | 30.0% | |
| TTAATTTCTTTACTAGGGTG+GGG | - | chr7_1:59934912-59934931 | Msa1027510:intron | 30.0% | |
| ! | AACGTTTGGAATCTAATCAA+GGG | - | chr7_1:59934946-59934965 | Msa1027510:intron | 30.0% |
| TACTTGATTTCTTGAGTAGT+GGG | - | chr7_1:59935027-59935046 | Msa1027510:intron | 30.0% | |
| !!! | TCTTGTTTTGAATGTAGTCA+AGG | + | chr7_1:59935504-59935523 | None:intergenic | 30.0% |
| ATTCGGTTTAATGGAATCAT+TGG | + | chr7_1:59935579-59935598 | None:intergenic | 30.0% | |
| ACATAAGCTACAATGGAAAA+AGG | + | chr7_1:59935836-59935855 | None:intergenic | 30.0% | |
| AACATGTACATAAGCTACAA+TGG | + | chr7_1:59935843-59935862 | None:intergenic | 30.0% | |
| TAGACACACACAATAATAAG+AGG | + | chr7_1:59935911-59935930 | None:intergenic | 30.0% | |
| !! | GAGTTGATTTGGTAGTAAAT+AGG | + | chr7_1:59936119-59936138 | None:intergenic | 30.0% |
| CCCATATTTACTGATATAAG+TGG | - | chr7_1:59936347-59936366 | Msa1027510:intron | 30.0% | |
| CCCACTTATATCAGTAAATA+TGG | + | chr7_1:59936351-59936370 | None:intergenic | 30.0% | |
| ! | AACTCACCTAAACTTTTCAT+CGG | - | chr7_1:59936670-59936689 | Msa1027510:intron | 30.0% |
| AGAGATCTTATACTGTTTCA+TGG | - | chr7_1:59936740-59936759 | Msa1027510:five_prime_UTR | 30.0% | |
| GAGATCTTATACTGTTTCAT+GGG | - | chr7_1:59936741-59936760 | Msa1027510:five_prime_UTR | 30.0% | |
| CAGTATAATGCATATTCTGA+CGG | + | chr7_1:59936856-59936875 | None:intergenic | 30.0% | |
| TATGCATTATACTGTACGTT+TGG | - | chr7_1:59936862-59936881 | Msa1027510:five_prime_UTR | 30.0% | |
| ! | GCAGTTCTTTTCTCTCTTTT+TGG | - | chr7_1:59933404-59933423 | Msa1027510:CDS | 35.0% |
| ACTAGAAAAGGGAAGAAAGA+AGG | + | chr7_1:59933473-59933492 | None:intergenic | 35.0% | |
| ACGAAATTGGCAAAAATCTG+AGG | + | chr7_1:59933501-59933520 | None:intergenic | 35.0% | |
| ACTCAAGTAGTTGTTGAGAA+GGG | + | chr7_1:59933540-59933559 | None:intergenic | 35.0% | |
| TACTCAAGTAGTTGTTGAGA+AGG | + | chr7_1:59933541-59933560 | None:intergenic | 35.0% | |
| ! | CTTATCATCTTTTCTCCAAG+AGG | - | chr7_1:59934095-59934114 | Msa1027510:intron | 35.0% |
| ! | TGTAACCTCAAAAGTACAGT+GGG | - | chr7_1:59934502-59934521 | Msa1027510:intron | 35.0% |
| TCGGCCTTAATTTCTTTACT+AGG | - | chr7_1:59934906-59934925 | Msa1027510:intron | 35.0% | |
| CGGCCTTAATTTCTTTACTA+GGG | - | chr7_1:59934907-59934926 | Msa1027510:intron | 35.0% | |
| CCACCCTAGTAAAGAAATTA+AGG | + | chr7_1:59934913-59934932 | None:intergenic | 35.0% | |
| CCTTAATTTCTTTACTAGGG+TGG | - | chr7_1:59934910-59934929 | Msa1027510:intron | 35.0% | |
| ! | CAACGTTTGGAATCTAATCA+AGG | - | chr7_1:59934945-59934964 | Msa1027510:intron | 35.0% |
| ! | ACGTTTGGAATCTAATCAAG+GGG | - | chr7_1:59934947-59934966 | Msa1027510:intron | 35.0% |
| TAATGAGTATCAGGATTGGA+AGG | + | chr7_1:59934976-59934995 | None:intergenic | 35.0% | |
| GTACTTGATTTCTTGAGTAG+TGG | - | chr7_1:59935026-59935045 | Msa1027510:intron | 35.0% | |
| !! | GAGTAGTGGGTTATATATAG+AGG | - | chr7_1:59935040-59935059 | Msa1027510:intron | 35.0% |
| TTATGAGAGACGTAAGAGAA+AGG | - | chr7_1:59935074-59935093 | Msa1027510:intron | 35.0% | |
| TATGAGAGACGTAAGAGAAA+GGG | - | chr7_1:59935075-59935094 | Msa1027510:intron | 35.0% | |
| ATATCCAAACCAATCGAAAC+CGG | + | chr7_1:59935689-59935708 | None:intergenic | 35.0% | |
| !! | CGATGAAGAATGAGTTGATT+TGG | + | chr7_1:59936130-59936149 | None:intergenic | 35.0% |
| ! | CAACTCATTCTTCATCGATT+TGG | - | chr7_1:59936133-59936152 | Msa1027510:CDS | 35.0% |
| TGACATCTATAAGGTGTAAC+AGG | + | chr7_1:59936255-59936274 | None:intergenic | 35.0% | |
| ACCTACAAGATCGATATAAG+TGG | - | chr7_1:59936446-59936465 | Msa1027510:intron | 35.0% | |
| CCTACAAGATCGATATAAGT+GGG | - | chr7_1:59936447-59936466 | Msa1027510:intron | 35.0% | |
| ATCTCATGTTCAGTCAATGA+AGG | - | chr7_1:59936495-59936514 | Msa1027510:intron | 35.0% | |
| ! | ATAAGTTTTCACATCAGCAG+CGG | + | chr7_1:59936572-59936591 | None:intergenic | 35.0% |
| CATATGCTCTTTAAACCTTG+AGG | - | chr7_1:59936611-59936630 | Msa1027510:intron | 35.0% | |
| ! | TTATACTGTACGTTTGGCTT+CGG | - | chr7_1:59936868-59936887 | Msa1027510:five_prime_UTR | 35.0% |
| CTGAGGTTGTGACTAGAAAA+GGG | + | chr7_1:59933484-59933503 | None:intergenic | 40.0% | |
| ! | TCTGAGGTTGTGACTAGAAA+AGG | + | chr7_1:59933485-59933504 | None:intergenic | 40.0% |
| !!! | TTGTTTTTGCTGCTGCTGTT+AGG | - | chr7_1:59933571-59933590 | Msa1027510:intron | 40.0% |
| !! | ACCACAGTGGTTGATTTGAT+AGG | - | chr7_1:59934437-59934456 | Msa1027510:intron | 40.0% |
| TCCTATCAAATCAACCACTG+TGG | + | chr7_1:59934441-59934460 | None:intergenic | 40.0% | |
| !! | CAGTGGTTGATTTGATAGGA+AGG | - | chr7_1:59934441-59934460 | Msa1027510:intron | 40.0% |
| ! | CTGTAACCTCAAAAGTACAG+TGG | - | chr7_1:59934501-59934520 | Msa1027510:intron | 40.0% |
| ! | GTAACCTCAAAAGTACAGTG+GGG | - | chr7_1:59934503-59934522 | Msa1027510:intron | 40.0% |
| TCATAGACGCATTTAACGAG+TGG | - | chr7_1:59934862-59934881 | Msa1027510:intron | 40.0% | |
| CATAGACGCATTTAACGAGT+GGG | - | chr7_1:59934863-59934882 | Msa1027510:intron | 40.0% | |
| ATCATTTCATTGGTGGGAAG+AGG | + | chr7_1:59935120-59935139 | None:intergenic | 40.0% | |
| !!! | CGGTTTTGATTGGTTTGGTT+CGG | + | chr7_1:59935669-59935688 | None:intergenic | 40.0% |
| CGAACCAAACCAATCAAAAC+CGG | - | chr7_1:59935667-59935686 | Msa1027510:intron | 40.0% | |
| !!! | GAAACCGGTTTTGATTGGTT+TGG | + | chr7_1:59935674-59935693 | None:intergenic | 40.0% |
| !! | CAATCGAAACCGGTTTTGAT+TGG | + | chr7_1:59935679-59935698 | None:intergenic | 40.0% |
| ! | CAATCAAAACCGGTTTCGAT+TGG | - | chr7_1:59935677-59935696 | Msa1027510:intron | 40.0% |
| ! | AAAACCGGTTTCGATTGGTT+TGG | - | chr7_1:59935682-59935701 | Msa1027510:intron | 40.0% |
| TTATAGGTCCACATTTGGGT+CGG | - | chr7_1:59936077-59936096 | Msa1027510:intron | 40.0% | |
| ATCTCCTGTTCAGTCAATGA+AGG | - | chr7_1:59936396-59936415 | Msa1027510:intron | 40.0% | |
| ! | TCAACCTTCATTGACTGAAC+AGG | + | chr7_1:59936403-59936422 | None:intergenic | 40.0% |
| CCCACTTATATCGATCTTGT+AGG | + | chr7_1:59936450-59936469 | None:intergenic | 40.0% | |
| AGCTAAACTCCTGATCTTGT+AGG | + | chr7_1:59936548-59936567 | None:intergenic | 40.0% | |
| ! | AGTTTAGGTGAGTTGAGCTT+CGG | + | chr7_1:59936664-59936683 | None:intergenic | 40.0% |
| TCTTTACTAGGGTGGGGTTA+AGG | - | chr7_1:59934918-59934937 | Msa1027510:intron | 45.0% | |
| CTTTACTAGGGTGGGGTTAA+GGG | - | chr7_1:59934919-59934938 | Msa1027510:intron | 45.0% | |
| GGGTTAAGGGTTTCAACGTT+TGG | - | chr7_1:59934932-59934951 | Msa1027510:intron | 45.0% | |
| AGTGTACGATGTGAGAGTAG+TGG | - | chr7_1:59935473-59935492 | Msa1027510:intron | 45.0% | |
| ATATGGAACCGACCCAAATG+TGG | + | chr7_1:59936088-59936107 | None:intergenic | 45.0% | |
| ! | GTTGACTCACCTACAAGATC+AGG | - | chr7_1:59936536-59936555 | Msa1027510:intron | 45.0% |
| !!! | AATTAAATATTATTTTTTTG+GGG | + | chr7_1:59936040-59936059 | None:intergenic | 5.0% |
| ! | CACACCCCACTGTACTTTTG+AGG | + | chr7_1:59934510-59934529 | None:intergenic | 50.0% |
| CAAGGTTGTGTCAGACCTCA+AGG | + | chr7_1:59936629-59936648 | None:intergenic | 50.0% | |
| ! | TAGGTGAGTTGAGCTTCGGA+GGG | + | chr7_1:59936660-59936679 | None:intergenic | 50.0% |
| ! | TTAGGTGAGTTGAGCTTCGG+AGG | + | chr7_1:59936661-59936680 | None:intergenic | 50.0% |
| CTTCGGAGGGAGACTCATCA+AGG | + | chr7_1:59936647-59936666 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 59933376 | 59936895 | 59933376 | ID=Msa1027510;Name=Msa1027510 |
| chr7_1 | mRNA | 59933376 | 59936895 | 59933376 | ID=Msa1027510-mRNA-1;Parent=Msa1027510;Name=Msa1027510-mRNA-1;_AED=0.05;_eAED=0.05;_QI=231|0.5|0.66|0.66|0.5|0.33|3|0|76 |
| chr7_1 | exon | 59933376 | 59933424 | 59933376 | ID=Msa1027510-mRNA-1:exon:12330;Parent=Msa1027510-mRNA-1 |
| chr7_1 | exon | 59936127 | 59936322 | 59936127 | ID=Msa1027510-mRNA-1:exon:12329;Parent=Msa1027510-mRNA-1 |
| chr7_1 | exon | 59936679 | 59936895 | 59936679 | ID=Msa1027510-mRNA-1:exon:12328;Parent=Msa1027510-mRNA-1 |
| chr7_1 | five_prime_UTR | 59936679 | 59936895 | 59936679 | ID=Msa1027510-mRNA-1:five_prime_utr;Parent=Msa1027510-mRNA-1 |
| chr7_1 | five_prime_UTR | 59936309 | 59936322 | 59936309 | ID=Msa1027510-mRNA-1:five_prime_utr;Parent=Msa1027510-mRNA-1 |
| chr7_1 | CDS | 59936127 | 59936308 | 59936127 | ID=Msa1027510-mRNA-1:cds;Parent=Msa1027510-mRNA-1 |
| chr7_1 | CDS | 59933376 | 59933424 | 59933376 | ID=Msa1027510-mRNA-1:cds;Parent=Msa1027510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
