AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1031680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1031680 MtrunA17_Chr7g0253211 99.859 708 1 0 1 708 178 885 0.0 1477
Msa1031680 MtrunA17_Chr7g0214531 79.595 593 120 1 117 708 7 599 0.0 1018
Msa1031680 MtrunA17_Chr1g0213321 71.713 654 167 6 64 708 32 676 0.0 984
Msa1031680 MtrunA17_Chr3g0140431 74.958 595 140 2 117 707 8 597 0.0 960
Msa1031680 MtrunA17_Chr1g0146301 72.320 625 157 5 89 707 69 683 0.0 957
Msa1031680 MtrunA17_Chr8g0340491 71.549 594 165 3 117 707 98 690 0.0 890
Msa1031680 MtrunA17_Chr4g0071031 38.754 289 159 6 140 425 4 277 6.59e-59 206
Msa1031680 MtrunA17_Chr2g0329981 38.062 289 161 6 140 425 4 277 1.44e-57 202
Msa1031680 MtrunA17_Chr8g0342821 38.408 289 159 7 140 425 4 276 1.02e-56 200
Msa1031680 MtrunA17_Chr2g0299661 37.370 289 163 6 140 425 4 277 1.16e-56 200
Msa1031680 MtrunA17_Chr7g0261501 36.879 282 162 5 147 425 9 277 1.64e-55 196
Msa1031680 MtrunA17_Chr1g0166821 37.234 282 161 5 147 425 10 278 7.66e-55 194
Msa1031680 MtrunA17_Chr1g0187571 37.589 282 160 5 147 425 10 278 1.36e-54 194
Msa1031680 MtrunA17_Chr1g0183631 36.525 282 163 5 147 425 9 277 5.47e-54 192
Msa1031680 MtrunA17_Chr8g0390211 37.543 293 162 8 137 425 2 277 2.15e-53 190
Msa1031680 MtrunA17_Chr6g0486611 36.749 283 161 6 147 425 9 277 2.24e-53 189
Msa1031680 MtrunA17_Chr1g0167261 36.972 284 161 5 147 425 10 280 1.78e-51 182
Msa1031680 MtrunA17_Chr3g0140071 36.042 283 163 6 147 425 9 277 2.06e-50 182
Msa1031680 MtrunA17_Chr1g0146151 35.106 282 167 5 147 425 9 277 2.29e-49 179
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1031680 AT3G03940.1 83.475 708 110 3 1 708 1 701 0.0 1219
Msa1031680 AT5G18190.2 81.497 708 114 4 1 708 1 691 0.0 1174
Msa1031680 AT5G18190.1 81.497 708 114 4 1 708 1 691 0.0 1174
Msa1031680 AT3G13670.1 75.500 600 142 2 113 707 103 702 0.0 985
Msa1031680 AT2G25760.1 72.013 611 163 4 104 707 63 672 0.0 954
Msa1031680 AT2G25760.2 71.824 614 162 6 104 707 63 675 0.0 946
Msa1031680 AT3G03930.1 73.878 245 63 1 464 707 43 287 1.38e-129 385
Msa1031680 AT4G26100.1 38.062 289 161 6 140 425 4 277 4.76e-58 204
Msa1031680 AT2G19470.1 38.754 289 159 6 140 425 4 277 1.36e-57 202
Msa1031680 AT1G72710.1 38.754 289 158 7 140 425 4 276 3.86e-57 201
Msa1031680 AT5G57015.1 38.062 289 161 6 140 425 4 277 6.47e-57 200
Msa1031680 AT1G03930.1 37.589 282 160 5 147 425 9 277 6.84e-57 201
Msa1031680 AT5G44100.1 37.943 282 159 5 147 425 9 277 9.46e-57 201
Msa1031680 AT5G44100.2 37.943 282 159 5 147 425 9 277 9.46e-57 201
Msa1031680 AT3G23340.1 38.652 282 157 5 147 425 9 277 1.27e-56 199
Msa1031680 AT4G28860.2 38.163 283 157 6 147 425 9 277 1.79e-55 194
Msa1031680 AT4G14340.1 37.943 282 159 5 147 425 15 283 3.41e-55 196
Msa1031680 AT4G28880.3 38.869 283 155 6 147 425 9 277 3.47e-55 195
Msa1031680 AT4G28880.2 38.869 283 155 6 147 425 9 277 3.47e-55 195
Msa1031680 AT4G28880.1 38.869 283 155 6 147 425 9 277 3.47e-55 195
Msa1031680 AT4G28880.4 38.869 283 155 6 147 425 9 277 3.47e-55 195
Msa1031680 AT4G28860.1 38.163 283 157 6 147 425 9 277 4.54e-55 194
Msa1031680 AT1G04440.1 37.943 282 159 5 147 425 9 277 4.97e-55 196
Msa1031680 AT4G14340.2 37.943 282 159 5 147 425 15 283 5.40e-55 192
Msa1031680 AT4G28540.1 37.234 282 161 5 147 425 13 281 9.56e-55 195
Msa1031680 AT5G43320.1 36.879 282 162 5 147 425 9 277 7.22e-54 193
Msa1031680 AT5G43320.2 36.879 282 162 5 147 425 9 277 6.50e-53 187
Msa1031680 AT5G43320.3 36.879 282 162 5 147 425 9 277 6.50e-53 187
Msa1031680 AT3G23340.2 38.491 265 152 5 167 425 4 263 2.41e-51 184
Msa1031680 AT4G08800.1 33.448 290 143 7 139 425 3 245 6.35e-42 154

Find 278 sgRNAs with CRISPR-Local

Find 543 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAAAGGGGCTGGCTATTT+TGG 0.134583 7_1:+66404334 Msa1031680:three_prime_UTR
CTCCATCGCAATGTTATTAT+TGG 0.162623 7_1:-66399236 None:intergenic
TAGAATTGATGGAGCTTTAA+AGG 0.179699 7_1:+66401401 Msa1031680:CDS
AACAGTAAAGGTTGTAATTA+TGG 0.186107 7_1:+66399932 Msa1031680:CDS
ACATTGATATTTCTCATAAA+AGG 0.197104 7_1:+66401059 Msa1031680:CDS
AACATTTGCTATATCCTTCT+TGG 0.199847 7_1:+66404058 Msa1031680:three_prime_UTR
GGTGATTGATGAATGAAATT+AGG 0.206148 7_1:-66397986 None:intergenic
GATATAAGCTTGGAATAATT+TGG 0.209647 7_1:-66401333 None:intergenic
ACAAGGAGATTTCTACATTT+TGG 0.215030 7_1:+66400151 Msa1031680:CDS
TTTCGGCAGTGACTGGGTTT+AGG 0.220425 7_1:-66404132 None:intergenic
GCTTCTAGGAACAGCTTAAA+TGG 0.224554 7_1:-66401282 None:intergenic
TTCCAGAACCTGTTGCATTA+AGG 0.230638 7_1:+66399176 Msa1031680:CDS
CGGAGCAAGATTGATTGATT+TGG 0.246716 7_1:+66399132 Msa1031680:CDS
TATCTTATTGATCTTGGTTT+AGG 0.259935 7_1:+66400665 Msa1031680:CDS
TTCGGCAGTGACTGGGTTTA+GGG 0.264797 7_1:-66404131 None:intergenic
TCAATAGCTGGTGCAGTTAA+TGG 0.273974 7_1:+66402278 Msa1031680:CDS
ACGACCTCAGGATTGGATTA+TGG 0.275540 7_1:+66402226 Msa1031680:intron
TCATGTTAGTAACTGCTTCT+AGG 0.275600 7_1:-66401296 None:intergenic
CCTATGAGTGGCAAGTTTAC+AGG 0.276750 7_1:+66399960 Msa1031680:CDS
TAATTACCGGATTACTTCTA+TGG 0.278399 7_1:+66403438 Msa1031680:CDS
GAGGGTGGAAGTGGTGATAA+AGG 0.280467 7_1:+66399256 Msa1031680:CDS
TGTTGTCTTCAGCTTCTAAA+TGG 0.280494 7_1:+66400817 Msa1031680:intron
GACTACTGCTGGCAGTCGTT+GGG 0.288669 7_1:+66403226 Msa1031680:CDS
TTGAGACCTATTAGAATTGA+TGG 0.289935 7_1:+66401390 Msa1031680:CDS
GAAGAAGATGATATTAGATA+TGG 0.307162 7_1:-66397945 None:intergenic
GGCGGTAATGCCACAGGTTT+AGG 0.312451 7_1:+66399055 Msa1031680:CDS
ATCAGAATACCCAGCATTCC+TGG 0.312595 7_1:-66403261 None:intergenic
GCCCTTAATGCAACAGGTTC+TGG 0.315068 7_1:-66399178 None:intergenic
GCTAGTGTACATGCACATTT+AGG 0.315855 7_1:+66400993 Msa1031680:CDS
TATATTGCCTCGATATGTTA+TGG 0.317484 7_1:+66404008 Msa1031680:CDS
TCCAGAACCTGTTGCATTAA+GGG 0.320427 7_1:+66399177 Msa1031680:CDS
CATACTTGGGCCCAGCCTTT+GGG 0.328803 7_1:+66400259 Msa1031680:CDS
TTGTAGGACTGCTGTGTATA+AGG 0.332041 7_1:-66403134 None:intergenic
TTCCTTTCTGTCTTGTATAC+AGG 0.339049 7_1:-66399673 None:intergenic
AAGTTGGGTAAGGGCGGTTT+CGG 0.339099 7_1:+66399694 Msa1031680:CDS
ACATACTTGGGCCCAGCCTT+TGG 0.344051 7_1:+66400258 Msa1031680:CDS
AAAGCTCCATCAATTCTAAT+AGG 0.345290 7_1:-66401396 None:intergenic
TTCTTATCATCAGCCGTTCC+AGG 0.346048 7_1:-66400638 None:intergenic
CAATTCTCTCCTTGATCAAC+AGG 0.347510 7_1:-66398977 None:intergenic
ATCAGAGACCTGATATATTC+AGG 0.347579 7_1:+66400874 Msa1031680:CDS
GGCCCAGCCTTTGGGATGTA+TGG 0.350118 7_1:+66400267 Msa1031680:CDS
ATTGCCGTGGCAGGGTTATC+AGG 0.351940 7_1:+66401085 Msa1031680:CDS
AAATGAAATATTAATGTGTT+TGG 0.355069 7_1:+66397746 Msa1031680:five_prime_UTR
TCGTCTAGTAATTTGCGTTT+TGG 0.355255 7_1:-66403499 None:intergenic
AATGGCTGTTATGGCATTCC+CGG 0.358781 7_1:+66400110 Msa1031680:CDS
TGAAATTAGGGTTCGTGAAA+TGG 0.359606 7_1:-66397973 None:intergenic
CGAGGCAATATAGAGATTCT+TGG 0.359895 7_1:-66403997 None:intergenic
AAATGATTCGCTCACTTTGT+AGG 0.366607 7_1:-66403150 None:intergenic
CTGTTCCTGCATCCATGATC+AGG 0.368840 7_1:-66402065 None:intergenic
AGGAAGGATGCTTATTAATC+TGG 0.370481 7_1:+66401536 Msa1031680:CDS
ACCTCTACGTTATTGTAAAC+AGG 0.370498 7_1:-66399208 None:intergenic
CGACAGGATGTCACCAAGTA+TGG 0.371024 7_1:+66400407 Msa1031680:intron
ATCAATTACCTCTGCTTCAT+AGG 0.372768 7_1:-66401639 None:intergenic
GTGATTGATGAATGAAATTA+GGG 0.380296 7_1:-66397985 None:intergenic
AAGTTATATCTTATTGATCT+TGG 0.385212 7_1:+66400659 Msa1031680:CDS
AGGAGAGTTGGAGGTGGAAG+AGG 0.385580 7_1:+66399028 Msa1031680:CDS
TGCACCATGCAAATGTAGTA+TGG 0.390511 7_1:-66397787 None:intergenic
TCCTGCGCCCTTAATGCAAC+AGG 0.395038 7_1:-66399184 None:intergenic
AAAGGATTTACCCTTTCAAA+TGG 0.397776 7_1:-66400473 None:intergenic
GTGCACGACATCAAAGCAAC+TGG 0.400829 7_1:+66404501 Msa1031680:three_prime_UTR
GCGAATCATTTCCTTTCAAA+TGG 0.401857 7_1:+66403162 Msa1031680:CDS
GTTGTTATGTCCAGGAATGC+TGG 0.402624 7_1:+66403251 Msa1031680:CDS
TGACTACTGCTGGCAGTCGT+TGG 0.405397 7_1:+66403225 Msa1031680:CDS
ACAGTAAAGGTTGTAATTAT+GGG 0.406747 7_1:+66399933 Msa1031680:CDS
ATTATTGGTGGTGGTGGTGT+TGG 0.407679 7_1:-66397819 None:intergenic
TATGTTGGCAGAAGGGTTAG+TGG 0.411408 7_1:+66399724 Msa1031680:CDS
TTTCAGGTTATGGACATACT+TGG 0.411506 7_1:+66400245 Msa1031680:intron
ACTATAATGTAGCTGACAAT+AGG 0.413169 7_1:+66401965 Msa1031680:CDS
AGCAATCTGAATGGCTGTTA+TGG 0.414069 7_1:+66400101 Msa1031680:intron
CTTCTAGGAACAGCTTAAAT+GGG 0.416955 7_1:-66401281 None:intergenic
CATTCCCGGGGTTCATTACA+AGG 0.417787 7_1:+66400124 Msa1031680:CDS
GTTGGAGGTGGAAGAGGAAG+AGG 0.417969 7_1:+66399034 Msa1031680:CDS
AGGGTGGAAGTGGTGATAAA+GGG 0.418036 7_1:+66399257 Msa1031680:CDS
GAAGATGGGAAAATAATTAC+CGG 0.419317 7_1:+66403425 Msa1031680:CDS
TGCGGTAATGGTGAGATTAT+TGG 0.421432 7_1:-66397834 None:intergenic
TGTGAGGGCTCGAGCTCAAT+GGG 0.421626 7_1:+66404283 Msa1031680:three_prime_UTR
CTATATCCTTCTTGGAAAGA+TGG 0.423686 7_1:+66404066 Msa1031680:three_prime_UTR
GTGATTCAAGGTTGTGGAGC+TGG 0.423726 7_1:+66403372 Msa1031680:intron
TGGGATGTATGGAATTCTCT+TGG 0.430414 7_1:+66400278 Msa1031680:CDS
ATATTGCCTCGATATGTTAT+GGG 0.430472 7_1:+66404009 Msa1031680:CDS
CATTGATATTTCTCATAAAA+GGG 0.435498 7_1:+66401060 Msa1031680:CDS
CCCTTCTGCCAACATAAACT+TGG 0.437660 7_1:-66399717 None:intergenic
GGGTGGAAGTGGTGATAAAG+GGG 0.437883 7_1:+66399258 Msa1031680:CDS
GATCGGGTTGCAATTGAATC+AGG 0.438357 7_1:-66398128 None:intergenic
CTGTTGATCAAGGAGAGAAT+TGG 0.443896 7_1:+66398978 Msa1031680:CDS
TTTACAAACCTGAATATATC+AGG 0.445016 7_1:-66400882 None:intergenic
AAATGGAAGGATGCATCATC+TGG 0.447277 7_1:+66400834 Msa1031680:CDS
AATGTGTTTGGATATTAGAA+AGG 0.447877 7_1:+66397758 Msa1031680:five_prime_UTR
AACAGAACTAGGAGGAGAGT+TGG 0.448810 7_1:+66399016 Msa1031680:CDS
CTGATCATGGATGCAGGAAC+AGG 0.449323 7_1:+66402066 Msa1031680:CDS
ATATGGGTTAACCTTGTGTT+CGG 0.449483 7_1:-66397928 None:intergenic
CTTCGATGGATTCCTTCACT+TGG 0.451971 7_1:-66403406 None:intergenic
CGTGATGATTAAAGTTGGAA+TGG 0.454968 7_1:+66404094 Msa1031680:three_prime_UTR
CCGGTGACAACTCATAAACT+TGG 0.455516 7_1:-66402098 None:intergenic
TCTCCTTGATCAACAGGTTG+TGG 0.455647 7_1:-66398971 None:intergenic
GAAAAGAGAGGATGCGGTAA+TGG 0.456944 7_1:-66397846 None:intergenic
GAAGATACCCTCTCAGGGAC+AGG 0.457209 7_1:-66399310 None:intergenic
TGGCCTCTTCAGCGAATTTG+TGG 0.461128 7_1:+66402040 Msa1031680:CDS
ATGCCACAGGTTTAGGTAAA+GGG 0.462923 7_1:+66399062 Msa1031680:CDS
GTGAAGGAATCCATCGAAGA+TGG 0.463883 7_1:+66403410 Msa1031680:CDS
CCTGTAAACTTGCCACTCAT+AGG 0.466576 7_1:-66399960 None:intergenic
AACGCGGGCTATGATTTGAA+TGG 0.467020 7_1:+66398881 Msa1031680:five_prime_UTR
TGTTGATCAAGGAGAGAATT+GGG 0.467095 7_1:+66398979 Msa1031680:CDS
ACGCGGGCTATGATTTGAAT+GGG 0.468085 7_1:+66398882 Msa1031680:five_prime_UTR
AAAAGGGAGATTGCCGTGGC+AGG 0.468289 7_1:+66401076 Msa1031680:CDS
TGATCAACAGGTTGTGGACC+AGG 0.469318 7_1:-66398965 None:intergenic
TACAAGACAGAAAGGAAGTT+GGG 0.470032 7_1:+66399679 Msa1031680:CDS
TGCAGTTAATGGCAGTTCCT+TGG 0.471533 7_1:+66402289 Msa1031680:CDS
AATAAAGAAGATACCCTCTC+AGG 0.473552 7_1:-66399316 None:intergenic
GTGTGAGGGCTCGAGCTCAA+TGG 0.474252 7_1:+66404282 Msa1031680:three_prime_UTR
GAATGCTGGGTATTCTGATC+AGG 0.474555 7_1:+66403265 Msa1031680:CDS
GGCCTCTTCAGCGAATTTGT+GGG 0.476058 7_1:+66402041 Msa1031680:CDS
TATGGCTGCTACTAATGATC+AGG 0.477831 7_1:+66403456 Msa1031680:CDS
GGATTGGATTATGGAGCAAT+GGG 0.478370 7_1:+66402235 Msa1031680:intron
TCCTTGGTTGTCATGTCCAA+AGG 0.482708 7_1:+66402305 Msa1031680:CDS
ATGGCTGTTATGGCATTCCC+GGG 0.484904 7_1:+66400111 Msa1031680:CDS
ACTGATATCCACTGAGTAGC+AGG 0.485351 7_1:-66401600 None:intergenic
CTTGAGAAGCTCCATTTGAA+AGG 0.486534 7_1:+66400462 Msa1031680:CDS
GGTGAGATTATTGGTGGTGG+TGG 0.487577 7_1:-66397825 None:intergenic
CTTGCTCCACTTCTCAACTC+TGG 0.487643 7_1:-66398914 None:intergenic
ATTCCATACATCCCAAAGGC+TGG 0.487823 7_1:-66400270 None:intergenic
TTGAGAAGCTCCATTTGAAA+GGG 0.491630 7_1:+66400463 Msa1031680:CDS
GTGATGATTAAAGTTGGAAT+GGG 0.494789 7_1:+66404095 Msa1031680:three_prime_UTR
TTTGCTTGGTCAACCTGGAA+CGG 0.496523 7_1:+66400625 Msa1031680:CDS
ATAAACAAGAAGTGGAAAGA+AGG 0.496800 7_1:+66403185 Msa1031680:CDS
TATACCTTTACATGGGTGCT+AGG 0.497641 7_1:-66403553 None:intergenic
GCAATGCAAGCAGCCATACT+TGG 0.499840 7_1:-66400420 None:intergenic
GATTAAAGTTGGAATGGGTA+GGG 0.500653 7_1:+66404100 Msa1031680:three_prime_UTR
CTCCTAGTTCTGTTCTGCGC+AGG 0.501750 7_1:-66399007 None:intergenic
TGATTAAAGTTGGAATGGGT+AGG 0.502432 7_1:+66404099 Msa1031680:three_prime_UTR
TACTATATCAGTTCAATAGC+TGG 0.503115 7_1:+66402266 Msa1031680:CDS
AATGCCACAGGTTTAGGTAA+AGG 0.503786 7_1:+66399061 Msa1031680:CDS
TATATCCTTCTTGGAAAGAT+GGG 0.503887 7_1:+66404067 Msa1031680:three_prime_UTR
CAATAATAACATTGCGATGG+AGG 0.504988 7_1:+66399237 Msa1031680:CDS
GACAGAAAGGAAGTTGGGTA+AGG 0.505067 7_1:+66399684 Msa1031680:CDS
AGACGAACTGCAGCTGGTAG+AGG 0.505471 7_1:+66399106 Msa1031680:CDS
AGAACTAGGAGGAGAGTTGG+AGG 0.506418 7_1:+66399019 Msa1031680:CDS
TCAATTCTAATAGGTCTCAA+TGG 0.509245 7_1:-66401387 None:intergenic
CCAACCTTGTGCAGGAAGGC+CGG 0.510823 7_1:-66402117 None:intergenic
GTTGGGGCGTTGTTATGTCC+AGG 0.512334 7_1:+66403243 Msa1031680:CDS
GAGGACGTGATGATTAAAGT+TGG 0.512941 7_1:+66404089 Msa1031680:three_prime_UTR
AATGCAAATATACCTTTACA+TGG 0.513801 7_1:-66403561 None:intergenic
AAGGGATGATCTTGAGTCAC+TGG 0.514728 7_1:+66401031 Msa1031680:CDS
AGTAATACCTCCATAGCATC+AGG 0.517129 7_1:-66399766 None:intergenic
GCCAAGTTTATGTTGGCAGA+AGG 0.517543 7_1:+66399716 Msa1031680:CDS
TTCTTGTTTATCCATTTGAA+AGG 0.517956 7_1:-66403173 None:intergenic
ACACATCAACTCCGCGGAAG+TGG 0.518789 7_1:-66401244 None:intergenic
TTCAGGTTATGGACATACTT+GGG 0.519606 7_1:+66400246 Msa1031680:intron
GTCTTCAGCTTCTAAATGGA+AGG 0.520168 7_1:+66400821 Msa1031680:intron
GAATTTGTGGGCCCTGATCA+TGG 0.521370 7_1:+66402053 Msa1031680:CDS
CTCCTGTATACAAGACAGAA+AGG 0.522807 7_1:+66399671 Msa1031680:CDS
TAGCAGCCATAGAAGTAATC+CGG 0.523560 7_1:-66403444 None:intergenic
TTGATTGATGAAGAAAAGAG+AGG 0.525716 7_1:-66397858 None:intergenic
AAAGAAAGCCAACCTTGTGC+AGG 0.526157 7_1:-66402125 None:intergenic
AAGAAGATGATATTAGATAT+GGG 0.526227 7_1:-66397944 None:intergenic
GGAAGGAGGTCACAAGGTTG+AGG 0.530053 7_1:-66399157 None:intergenic
ACTGCAGCTGGTAGAGGCCG+CGG 0.531027 7_1:+66399112 Msa1031680:CDS
ACCTGTTGCATTAAGGGCGC+AGG 0.531495 7_1:+66399183 Msa1031680:CDS
GCAAGAAGGTCAAAGCGGCT+TGG 0.531798 7_1:+66398932 Msa1031680:CDS
CCAAGTTTATGTTGGCAGAA+GGG 0.532556 7_1:+66399717 Msa1031680:CDS
CTGTAAACTTGCCACTCATA+GGG 0.533466 7_1:-66399959 None:intergenic
GTCACCTCCATGACTACTGC+TGG 0.533941 7_1:+66403215 Msa1031680:CDS
ACCAGCTGCAGTTCGTCTCG+TGG 0.534661 7_1:-66399101 None:intergenic
TCGAGTAGGTCCTGATGCTA+TGG 0.535655 7_1:+66399756 Msa1031680:CDS
GGTCCACAACCTGTTGATCA+AGG 0.537351 7_1:+66398968 Msa1031680:CDS
AGGAACAGCTTAAATGGGGC+GGG 0.539923 7_1:-66401276 None:intergenic
AGGATTGGATTATGGAGCAA+TGG 0.542568 7_1:+66402234 Msa1031680:intron
TAAAGCACGGCCAAGAAACA+TGG 0.543249 7_1:-66404357 None:intergenic
TGCACTGACTAGTCAAGGAC+TGG 0.544426 7_1:-66404483 None:intergenic
GGCTGCTTGCATTGCAGTGG+AGG 0.545351 7_1:+66400428 Msa1031680:CDS
CCCACGAGACGAACTGCAGC+TGG 0.546076 7_1:+66399100 Msa1031680:CDS
ATACCTTTACATGGGTGCTA+GGG 0.546088 7_1:-66403552 None:intergenic
CAGTAGTCATGGAGGTGACA+TGG 0.549734 7_1:-66403211 None:intergenic
TCAAATGGATAAACAAGAAG+TGG 0.550338 7_1:+66403177 Msa1031680:CDS
AATAACATTGCGATGGAGGG+TGG 0.551319 7_1:+66399241 Msa1031680:CDS
GTAGACAAGGGCATTGAGGA+TGG 0.553137 7_1:+66402000 Msa1031680:CDS
CGACCCTTGTAATGAACCCC+GGG 0.553304 7_1:-66400128 None:intergenic
GGCCCACAAATTCGCTGAAG+AGG 0.554852 7_1:-66402043 None:intergenic
TTTCCCTAGCACCCATGTAA+AGG 0.556145 7_1:+66403549 Msa1031680:CDS
TTTGAGCATAGAAACAGTAA+AGG 0.556925 7_1:+66399920 Msa1031680:CDS
TTCCATACATCCCAAAGGCT+GGG 0.558942 7_1:-66400269 None:intergenic
TGAAGGAATCCATCGAAGAT+GGG 0.560900 7_1:+66403411 Msa1031680:CDS
ATACAAGACAGAAAGGAAGT+TGG 0.561276 7_1:+66399678 Msa1031680:CDS
CCAAGTTTATGAGTTGTCAC+CGG 0.561482 7_1:+66402098 Msa1031680:CDS
TTACAATAACGTAGAGGTAG+TGG 0.562131 7_1:+66399213 Msa1031680:CDS
AAGATACCCTCTCAGGGACA+GGG 0.562274 7_1:-66399309 None:intergenic
CGGCTTGGAGATCTTCAGCC+TGG 0.563701 7_1:+66398947 Msa1031680:CDS
TTGTTATGTCCAGGAATGCT+GGG 0.565669 7_1:+66403252 Msa1031680:CDS
GGTTTCGGCCAAGTTTATGT+TGG 0.566698 7_1:+66399709 Msa1031680:CDS
TGCCCTTGTCTACATGCTGA+CGG 0.567584 7_1:-66401990 None:intergenic
TAGGTAGGACTGGCAGTCGA+AGG 0.568222 7_1:+66401012 Msa1031680:CDS
AATGGTGAGATTATTGGTGG+TGG 0.570541 7_1:-66397828 None:intergenic
CATGCACATTTAGGTAGGAC+TGG 0.571892 7_1:+66401002 Msa1031680:CDS
GCTTTGATAAGCAATCTGAA+TGG 0.572030 7_1:+66400092 Msa1031680:intron
GGAAGAGGCGGTAATGCCAC+AGG 0.572031 7_1:+66399049 Msa1031680:CDS
ACGACTGCCAGCAGTAGTCA+TGG 0.572203 7_1:-66403222 None:intergenic
GATGAAGAAAAGAGAGGATG+CGG 0.572897 7_1:-66397852 None:intergenic
GGAGGTGGAAGAGGAAGAGG+CGG 0.573185 7_1:+66399037 Msa1031680:CDS
TGGGCCCTGATCATGGATGC+AGG 0.575619 7_1:+66402060 Msa1031680:CDS
ATATTTATGCAGGTGCAAGT+TGG 0.575633 7_1:+66399643 Msa1031680:intron
TAAACAAGAAGTGGAAAGAA+GGG 0.576099 7_1:+66403186 Msa1031680:CDS
ACTAGGAGGAGAGTTGGAGG+TGG 0.576453 7_1:+66399022 Msa1031680:CDS
AGCCTGCGCAGAACAGAACT+AGG 0.577364 7_1:+66399005 Msa1031680:CDS
AATAATAACATTGCGATGGA+GGG 0.577523 7_1:+66399238 Msa1031680:CDS
ATAAAGAAGATACCCTCTCA+GGG 0.577785 7_1:-66399315 None:intergenic
ATAGGTCTCAATGGAGTGCA+TGG 0.578825 7_1:-66401378 None:intergenic
ATTGCGATGGAGGGTGGAAG+TGG 0.579631 7_1:+66399247 Msa1031680:CDS
GTCCTCCCATCTTTCCAAGA+AGG 0.580042 7_1:-66404072 None:intergenic
AGGATGCCAGAGTTGAGAAG+TGG 0.581316 7_1:+66398908 Msa1031680:exon
CCAGCTGCAGTTCGTCTCGT+GGG 0.582642 7_1:-66399100 None:intergenic
GCATGTAGACAAGGGCATTG+AGG 0.583537 7_1:+66401996 Msa1031680:CDS
AAAGGGAGATTGCCGTGGCA+GGG 0.586233 7_1:+66401077 Msa1031680:CDS
GGCCAATAATAACATTGCGA+TGG 0.587946 7_1:+66399234 Msa1031680:CDS
ACTACTGCTGGCAGTCGTTG+GGG 0.590324 7_1:+66403227 Msa1031680:CDS
ATTACCTCTGCTTCATAGGA+CGG 0.591225 7_1:-66401635 None:intergenic
CATTGAATCAGGTTTGTGCA+CGG 0.597171 7_1:+66400581 Msa1031680:intron
TAGACAAGGGCATTGAGGAT+GGG 0.597926 7_1:+66402001 Msa1031680:CDS
TGCACGACATCAAAGCAACT+GGG 0.599638 7_1:+66404502 Msa1031680:three_prime_UTR
TGTTCCTGCATCCATGATCA+GGG 0.601851 7_1:-66402064 None:intergenic
CACAACCCCTGTCCCTGAGA+GGG 0.602420 7_1:+66399303 Msa1031680:CDS
TACTAACATGAGATTTGATG+AGG 0.603551 7_1:+66401308 Msa1031680:CDS
TCGACCCTTGTAATGAACCC+CGG 0.603691 7_1:-66400129 None:intergenic
ATGCAACAGGTTCTGGAAGG+AGG 0.603984 7_1:-66399171 None:intergenic
TCGGCAGTGACTGGGTTTAG+GGG 0.606869 7_1:-66404130 None:intergenic
AGTTGAGAAGTGGAGCAAGA+AGG 0.609115 7_1:+66398918 Msa1031680:CDS
CGCACCTGATAACCCTGCCA+CGG 0.610039 7_1:-66401089 None:intergenic
AGGTAGGACTGGCAGTCGAA+GGG 0.615002 7_1:+66401013 Msa1031680:CDS
GTTGGCAGAAGGGTTAGTGG+TGG 0.615848 7_1:+66399727 Msa1031680:CDS
AGTGGTGGCTCTGATCGAGT+AGG 0.615874 7_1:+66399742 Msa1031680:CDS
CATACCATACTACATTTGCA+TGG 0.618089 7_1:+66397783 Msa1031680:five_prime_UTR
CGGTGACAACTCATAAACTT+GGG 0.618245 7_1:-66402097 None:intergenic
TAGGAACAGCTTAAATGGGG+CGG 0.618479 7_1:-66401277 None:intergenic
GTTCATTACAAGGGTCGACA+AGG 0.618757 7_1:+66400134 Msa1031680:CDS
GCTCCGTCAGCATGTAGACA+AGG 0.619103 7_1:+66401987 Msa1031680:CDS
ATCCTTCTTGGAAAGATGGG+AGG 0.620125 7_1:+66404070 Msa1031680:three_prime_UTR
GTGTACATGCACATTTAGGT+AGG 0.623393 7_1:+66400997 Msa1031680:CDS
ACAGAAAGGAAGTTGGGTAA+GGG 0.625171 7_1:+66399685 Msa1031680:CDS
GCTATGATTTGAATGGGGAG+AGG 0.627630 7_1:+66398888 Msa1031680:five_prime_UTR
AAAGCCAACCTTGTGCAGGA+AGG 0.628987 7_1:-66402121 None:intergenic
TTAATGCAACAGGTTCTGGA+AGG 0.631616 7_1:-66399174 None:intergenic
AGTAGGTCCTGATGCTATGG+AGG 0.631634 7_1:+66399759 Msa1031680:CDS
GGTTCTGGAAGGAGGTCACA+AGG 0.637818 7_1:-66399163 None:intergenic
TGGAAGTGGTGATAAAGGGG+TGG 0.639830 7_1:+66399261 Msa1031680:CDS
TCAGTATGGAGAAGAAAGCA+TGG 0.642935 7_1:-66398007 None:intergenic
CACGCCGTCCTATGAAGCAG+AGG 0.644205 7_1:+66401631 Msa1031680:CDS
TCATAAAAGGGAGATTGCCG+TGG 0.646563 7_1:+66401072 Msa1031680:CDS
AGATACCCTCTCAGGGACAG+GGG 0.647323 7_1:-66399308 None:intergenic
GAAAGGAAGTTGGGTAAGGG+CGG 0.647435 7_1:+66399688 Msa1031680:CDS
TGTCGTGCACTGACTAGTCA+AGG 0.649390 7_1:-66404488 None:intergenic
TATGGCTGCTTGCATTGCAG+TGG 0.656459 7_1:+66400425 Msa1031680:CDS
GGTAATGGTGAGATTATTGG+TGG 0.656608 7_1:-66397831 None:intergenic
AGCGATGAAAGTAACGATCG+TGG 0.656750 7_1:-66398092 None:intergenic
ATTCCCGGGGTTCATTACAA+GGG 0.656914 7_1:+66400125 Msa1031680:CDS
ATGCAAATATACCTTTACAT+GGG 0.657780 7_1:-66403560 None:intergenic
TGGGTAGTCCTGCTACTCAG+TGG 0.660145 7_1:+66401592 Msa1031680:CDS
CTCCGTCAGCATGTAGACAA+GGG 0.662272 7_1:+66401988 Msa1031680:CDS
ATTATGGGCCTCCCTATGAG+TGG 0.662879 7_1:+66399948 Msa1031680:CDS
GCACAACCCCTGTCCCTGAG+AGG 0.664978 7_1:+66399302 Msa1031680:CDS
ACCTTTGGACATGACAACCA+AGG 0.669025 7_1:-66402306 None:intergenic
CGCGGGCTATGATTTGAATG+GGG 0.669046 7_1:+66398883 Msa1031680:five_prime_UTR
GAAGTGAGCTATGCTGTGTG+AGG 0.670078 7_1:+66404267 Msa1031680:three_prime_UTR
AGTTCGCCCATAACATATCG+AGG 0.672330 7_1:-66404015 None:intergenic
TAAACTTGCCACTCATAGGG+AGG 0.673865 7_1:-66399956 None:intergenic
CTGCGCAGAACAGAACTAGG+AGG 0.676245 7_1:+66399008 Msa1031680:CDS
TTCTAGGAACAGCTTAAATG+GGG 0.677821 7_1:-66401280 None:intergenic
GAGAATTCCATACATCCCAA+AGG 0.684665 7_1:-66400274 None:intergenic
TGGCTGTTATGGCATTCCCG+GGG 0.691580 7_1:+66400112 Msa1031680:CDS
AAAACTCACAGATCGAGACG+TGG 0.692561 7_1:-66398168 None:intergenic
AAGTGAGCTATGCTGTGTGA+GGG 0.693402 7_1:+66404268 Msa1031680:three_prime_UTR
ACCTGTTTACAATAACGTAG+AGG 0.694979 7_1:+66399207 Msa1031680:CDS
GTGGAGCAAGAAGGTCAAAG+CGG 0.702956 7_1:+66398927 Msa1031680:CDS
ACGAGACTCAAGAGACTCTG+CGG 0.710127 7_1:+66403518 Msa1031680:CDS
AGACCCTTTACCTAAACCTG+TGG 0.726840 7_1:-66399065 None:intergenic
AATCAATCAATCTTGCTCCG+CGG 0.728884 7_1:-66399129 None:intergenic
GCACGACATCAAAGCAACTG+GGG 0.740342 7_1:+66404503 Msa1031680:three_prime_UTR
AAAGCAACACATCAACTCCG+CGG 0.754227 7_1:-66401250 None:intergenic
ACTGCCAGCAGTAGTCATGG+AGG 0.765706 7_1:-66403219 None:intergenic
TGGGTTGTATATAAGCTGTG+TGG 0.777779 7_1:+66402020 Msa1031680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTGTTTTATATATATG+TGG + chr7_1:66398205-66398224 Msa1031680:intron 10.0%
!!! ATTTTTTATTTATTTTTTCC+GGG + chr7_1:66402510-66402529 Msa1031680:intron 10.0%
!!! CTATATTGTTTTTTTTTTTT+TGG + chr7_1:66402538-66402557 Msa1031680:intron 10.0%
!! ATAAATTTCAACATATAATA+GGG - chr7_1:66403594-66403613 None:intergenic 10.0%
!! AAATGAAATATTAATGTGTT+TGG + chr7_1:66397746-66397765 Msa1031680:five_prime_UTR 15.0%
!! AAAAATACAAAAGTTAGAAT+TGG - chr7_1:66400071-66400090 None:intergenic 15.0%
!!! AATTCTAACTTTTGTATTTT+TGG + chr7_1:66400070-66400089 Msa1031680:intron 15.0%
!! TATTTCCATTTATTATGAAT+AGG + chr7_1:66400522-66400541 Msa1031680:intron 15.0%
!!! GCTATACTTTTTTTATATAT+AGG + chr7_1:66401500-66401519 Msa1031680:intron 15.0%
!!! TACTTTTTTTATATATAGGT+TGG + chr7_1:66401504-66401523 Msa1031680:intron 15.0%
!! TAATTGATATATCTTCTATA+TGG + chr7_1:66401654-66401673 Msa1031680:intron 15.0%
!! TTAATAATTAACACTTTCTT+TGG + chr7_1:66401931-66401950 Msa1031680:intron 15.0%
!! TCATGTACTATTTATTATTT+AGG + chr7_1:66402409-66402428 Msa1031680:intron 15.0%
!!! TTTTTTTTTTGGTTCTTTTA+TGG + chr7_1:66402549-66402568 Msa1031680:intron 15.0%
!! CATTTAAATTGGAAAAAAAA+TGG - chr7_1:66402641-66402660 None:intergenic 15.0%
!! TAAATTTCAACATATAATAG+GGG - chr7_1:66403593-66403612 None:intergenic 15.0%
!! CATAAATTTCAACATATAAT+AGG - chr7_1:66403595-66403614 None:intergenic 15.0%
!! TGTATAAAAAAGAAAGATAA+AGG + chr7_1:66404187-66404206 Msa1031680:intron 15.0%
!! TGTATAAAAAAGAAAGATAA+AGG + chr7_1:66404187-66404206 Msa1031680:intron 15.0%
!! AAGAAGATGATATTAGATAT+GGG - chr7_1:66397947-66397966 None:intergenic 20.0%
!!! TGTTTGTTTCTGATAAATTT+TGG + chr7_1:66398324-66398343 Msa1031680:intron 20.0%
!!! TTTGATTTTTTTAATTGCAG+AGG + chr7_1:66398832-66398851 Msa1031680:intron 20.0%
!!! CAGTGTTATTAATATTTCAT+TGG - chr7_1:66399843-66399862 None:intergenic 20.0%
!! AAATATTAATAACACTGTGT+TGG + chr7_1:66399846-66399865 Msa1031680:intron 20.0%
!! AACAGAGTTAAATAAGAAAA+AGG - chr7_1:66399883-66399902 None:intergenic 20.0%
!! ATGCTTAAAAAATGTATTCT+TGG - chr7_1:66400022-66400041 None:intergenic 20.0%
!! AAAGGAAAACAAATTATTTC+AGG + chr7_1:66400229-66400248 Msa1031680:intron 20.0%
!!! AAACAAATTATTTCAGGTTA+TGG + chr7_1:66400235-66400254 Msa1031680:intron 20.0%
!! GACTATTTGTTTCATTATTT+AGG + chr7_1:66400317-66400336 Msa1031680:intron 20.0%
!! CTAAACCTATTCATAATAAA+TGG - chr7_1:66400530-66400549 None:intergenic 20.0%
!! CATTTATTATGAATAGGTTT+AGG + chr7_1:66400528-66400547 Msa1031680:intron 20.0%
!! AAGTTATATCTTATTGATCT+TGG + chr7_1:66400659-66400678 Msa1031680:CDS 20.0%
!!! AAATAACTAAAATCTAAGGT+TGG - chr7_1:66400752-66400771 None:intergenic 20.0%
!!! AACCTTAGATTTTAGTTATT+TGG + chr7_1:66400751-66400770 Msa1031680:intron 20.0%
!! ACATTGATATTTCTCATAAA+AGG + chr7_1:66401059-66401078 Msa1031680:CDS 20.0%
!! CATTGATATTTCTCATAAAA+GGG + chr7_1:66401060-66401079 Msa1031680:CDS 20.0%
!!! CTTAGAAGTTTTATCTTATA+TGG + chr7_1:66401151-66401170 Msa1031680:intron 20.0%
!!! TGTCTTTTGTATTTATTTGA+AGG + chr7_1:66401434-66401453 Msa1031680:intron 20.0%
!! AAACTATAAATGTTGCAAAA+GGG - chr7_1:66402344-66402363 None:intergenic 20.0%
!! AAAACTATAAATGTTGCAAA+AGG - chr7_1:66402345-66402364 None:intergenic 20.0%
!! AATAGTACATGAAAATTACA+CGG - chr7_1:66402401-66402420 None:intergenic 20.0%
!! ACAAAAGGTAACATTTAAAT+TGG - chr7_1:66402652-66402671 None:intergenic 20.0%
!!! ACATTTTAACATTGTTATTC+TGG + chr7_1:66403294-66403313 Msa1031680:intron 20.0%
!! ACATACTTATATTTCTCATT+TGG + chr7_1:66403350-66403369 Msa1031680:intron 20.0%
!! AATAAAGTTAGATGTTAAGA+AGG - chr7_1:66403738-66403757 None:intergenic 20.0%
!!! ACAAAAAAAATCAGACTTTT+AGG - chr7_1:66403896-66403915 None:intergenic 20.0%
!!! TTAATATGGAAAGACTTTTT+CGG - chr7_1:66404152-66404171 None:intergenic 20.0%
!!! TTATGACGCAATTTTTAATA+TGG - chr7_1:66404166-66404185 None:intergenic 20.0%
!! AAAAAGAAAGATAAAGGATA+AGG + chr7_1:66404193-66404212 Msa1031680:intron 20.0%
!!! TGAATAGTGTAACATTTTAA+AGG + chr7_1:66404319-66404338 Msa1031680:three_prime_UTR 20.0%
!!! GAATAGTGTAACATTTTAAA+GGG + chr7_1:66404320-66404339 Msa1031680:three_prime_UTR 20.0%
!!! AATAGTGTAACATTTTAAAG+GGG + chr7_1:66404321-66404340 Msa1031680:three_prime_UTR 20.0%
!!! ATCGTAAATTTTTTAAAGCA+CGG - chr7_1:66404373-66404392 None:intergenic 20.0%
! AATGTGTTTGGATATTAGAA+AGG + chr7_1:66397758-66397777 Msa1031680:five_prime_UTR 25.0%
! GAAGAAGATGATATTAGATA+TGG - chr7_1:66397948-66397967 None:intergenic 25.0%
! GTGATTGATGAATGAAATTA+GGG - chr7_1:66397988-66398007 None:intergenic 25.0%
!!! TTTGTTGTTTTTTTTCCGAT+CGG + chr7_1:66398264-66398283 Msa1031680:intron 25.0%
!! TCTGATAAATTTTGGATGAT+CGG + chr7_1:66398332-66398351 Msa1031680:intron 25.0%
! ACATACTTTCTATATCATCA+TGG - chr7_1:66398570-66398589 None:intergenic 25.0%
!! TGAATTTAGAATGCAGAAAA+TGG + chr7_1:66398592-66398611 Msa1031680:intron 25.0%
! ACGCAAATGTTTGAAAAATA+TGG - chr7_1:66398741-66398760 None:intergenic 25.0%
!! ATATCTTTGAAAATGCACTA+AGG - chr7_1:66399364-66399383 None:intergenic 25.0%
! ATATATTAATTGAGCTGTTC+TGG + chr7_1:66399477-66399496 Msa1031680:intron 25.0%
!!! AAAGAATGTTTGTTATGTTC+TGG + chr7_1:66399541-66399560 Msa1031680:intron 25.0%
! ATTAACACACATATTTATGC+AGG + chr7_1:66399633-66399652 Msa1031680:intron 25.0%
!! TCTTATTTAACTCTGTTTGA+AGG + chr7_1:66399886-66399905 Msa1031680:intron 25.0%
! AACAGTAAAGGTTGTAATTA+TGG + chr7_1:66399932-66399951 Msa1031680:CDS 25.0%
! ACAGTAAAGGTTGTAATTAT+GGG + chr7_1:66399933-66399952 Msa1031680:CDS 25.0%
!!! TCTTTAAGTTCATTCCATTT+TGG + chr7_1:66400362-66400381 Msa1031680:intron 25.0%
!! GACTCTGAAAAAATATCAAA+AGG - chr7_1:66400494-66400513 None:intergenic 25.0%
! TATCTTATTGATCTTGGTTT+AGG + chr7_1:66400665-66400684 Msa1031680:CDS 25.0%
! CTCCAAATAACTAAAATCTA+AGG - chr7_1:66400756-66400775 None:intergenic 25.0%
! ATTAATGCACAAGCAAAATA+TGG - chr7_1:66400784-66400803 None:intergenic 25.0%
! TTTACAAACCTGAATATATC+AGG - chr7_1:66400885-66400904 None:intergenic 25.0%
! GATATAAGCTTGGAATAATT+TGG - chr7_1:66401336-66401355 None:intergenic 25.0%
! AATGAAGCAAAATAAAGAGA+CGG - chr7_1:66401912-66401931 None:intergenic 25.0%
! CTTCTATTAAGCAAATCTTA+AGG + chr7_1:66402168-66402187 Msa1031680:intron 25.0%
! ATCAAAAAATATCTACGACT+TGG - chr7_1:66402490-66402509 None:intergenic 25.0%
! AAAAACAATATAGACAAACC+CGG - chr7_1:66402531-66402550 None:intergenic 25.0%
! ACATGAAATTTACCAATCTA+AGG - chr7_1:66402894-66402913 None:intergenic 25.0%
! TAGATTGGTAAATTTCATGT+TGG + chr7_1:66402894-66402913 Msa1031680:intron 25.0%
!! ATCTAATTACGATGTTTTCA+AGG - chr7_1:66402968-66402987 None:intergenic 25.0%
! TCGTAATTAGATATATAAGC+TGG + chr7_1:66402976-66402995 Msa1031680:intron 25.0%
! CGTAATTAGATATATAAGCT+GGG + chr7_1:66402977-66402996 Msa1031680:intron 25.0%
! ACTTGATGTATGTTATCTAA+TGG + chr7_1:66403087-66403106 Msa1031680:intron 25.0%
!! TTCTTGTTTATCCATTTGAA+AGG - chr7_1:66403176-66403195 None:intergenic 25.0%
! ATGCAAATATACCTTTACAT+GGG - chr7_1:66403563-66403582 None:intergenic 25.0%
! AATGCAAATATACCTTTACA+TGG - chr7_1:66403564-66403583 None:intergenic 25.0%
! TAAGAAGGAAAAACAGAAAA+GGG - chr7_1:66403723-66403742 None:intergenic 25.0%
! TTAAGAAGGAAAAACAGAAA+AGG - chr7_1:66403724-66403743 None:intergenic 25.0%
! GTTAACAATTAACAATGGAA+GGG - chr7_1:66403770-66403789 None:intergenic 25.0%
! AGTTAACAATTAACAATGGA+AGG - chr7_1:66403771-66403790 None:intergenic 25.0%
! CTGAAGTTAACAATTAACAA+TGG - chr7_1:66403775-66403794 None:intergenic 25.0%
! TTGTTAATTGTTAACTTCAG+TGG + chr7_1:66403775-66403794 Msa1031680:intron 25.0%
! AGTAGGATATTAATACTATG+AGG - chr7_1:66403953-66403972 None:intergenic 25.0%
! AGTATTAATATCCTACTTGA+TGG + chr7_1:66403956-66403975 Msa1031680:intron 25.0%
TTGATTGATGAAGAAAAGAG+AGG - chr7_1:66397861-66397880 None:intergenic 30.0%
TATTACAAAAACCGAACACA+AGG + chr7_1:66397917-66397936 Msa1031680:five_prime_UTR 30.0%
GGTGATTGATGAATGAAATT+AGG - chr7_1:66397989-66398008 None:intergenic 30.0%
AAAAACTGTATAACCGTCAT+CGG - chr7_1:66398304-66398323 None:intergenic 30.0%
! GTTGATTCAGTTGAAGTAAT+TGG + chr7_1:66398426-66398445 Msa1031680:intron 30.0%
AGATTTCTTTGTATGCTCTT+AGG + chr7_1:66398616-66398635 Msa1031680:intron 30.0%
!!! TAGGTACATTGTTTTTGTTG+TGG + chr7_1:66398635-66398654 Msa1031680:intron 30.0%
! TTTGGTATCTAATGCCTTTT+CGG + chr7_1:66398677-66398696 Msa1031680:intron 30.0%
CAGATAAAAACATACCGAAA+AGG - chr7_1:66398694-66398713 None:intergenic 30.0%
!!! GAGGATTTTTTTGCTGTTTT+CGG + chr7_1:66398851-66398870 Msa1031680:intron 30.0%
!!! AGGATTTTTTTGCTGTTTTC+GGG + chr7_1:66398852-66398871 Msa1031680:five_prime_UTR 30.0%
AATAATAACATTGCGATGGA+GGG + chr7_1:66399238-66399257 Msa1031680:CDS 30.0%
AATGAAAAACAGCAAAAGCA+TGG - chr7_1:66399445-66399464 None:intergenic 30.0%
TTTGAGCATAGAAACAGTAA+AGG + chr7_1:66399920-66399939 Msa1031680:CDS 30.0%
TCTTTCTTTCATGCATGAAA+AGG + chr7_1:66399992-66400011 Msa1031680:intron 30.0%
! ACAAGGAGATTTCTACATTT+TGG + chr7_1:66400151-66400170 Msa1031680:CDS 30.0%
!! TTCTACATTTTGGTGAGATA+TGG + chr7_1:66400161-66400180 Msa1031680:intron 30.0%
TTCCCTTTATCAACGTATAT+TGG + chr7_1:66400191-66400210 Msa1031680:intron 30.0%
! AGCCAATATACGTTGATAAA+GGG - chr7_1:66400196-66400215 None:intergenic 30.0%
AAAGGATTTACCCTTTCAAA+TGG - chr7_1:66400476-66400495 None:intergenic 30.0%
! AAACCAGAAAACTTTTTGCT+TGG + chr7_1:66400611-66400630 Msa1031680:CDS 30.0%
GATAGAAAATTAAAACGCAG+TGG - chr7_1:66400726-66400745 None:intergenic 30.0%
TAAATGTTGCGAGTATAACA+TGG + chr7_1:66400901-66400920 Msa1031680:intron 30.0%
! ATAATATGCCTTTTTGTGCA+GGG + chr7_1:66400956-66400975 Msa1031680:intron 30.0%
TACTAACATGAGATTTGATG+AGG + chr7_1:66401308-66401327 Msa1031680:CDS 30.0%
GTCAAAAAGTGATATAAGCT+TGG - chr7_1:66401346-66401365 None:intergenic 30.0%
TCAATTCTAATAGGTCTCAA+TGG - chr7_1:66401390-66401409 None:intergenic 30.0%
TTGAGACCTATTAGAATTGA+TGG + chr7_1:66401390-66401409 Msa1031680:CDS 30.0%
AAAGCTCCATCAATTCTAAT+AGG - chr7_1:66401399-66401418 None:intergenic 30.0%
! TAGAATTGATGGAGCTTTAA+AGG + chr7_1:66401401-66401420 Msa1031680:CDS 30.0%
! TCAACTTTACTTCCATTTTC+TGG + chr7_1:66401778-66401797 Msa1031680:intron 30.0%
TTCTAATAAACAACCCTTTG+CGG - chr7_1:66401888-66401907 None:intergenic 30.0%
ACTATAATGTAGCTGACAAT+AGG + chr7_1:66401965-66401984 Msa1031680:CDS 30.0%
AAGACGAAATATAAAGATCG+AGG - chr7_1:66402151-66402170 None:intergenic 30.0%
TACTATATCAGTTCAATAGC+TGG + chr7_1:66402266-66402285 Msa1031680:CDS 30.0%
CAGATTCATGTTGATACAAA+AGG - chr7_1:66402667-66402686 None:intergenic 30.0%
GATAGAAAAAAACTTAGACC+AGG - chr7_1:66402739-66402758 None:intergenic 30.0%
!! AACTCCCAAATTGTTTTATC+AGG + chr7_1:66403007-66403026 Msa1031680:intron 30.0%
!! ACTCCCAAATTGTTTTATCA+GGG + chr7_1:66403008-66403027 Msa1031680:intron 30.0%
TCAAATGGATAAACAAGAAG+TGG + chr7_1:66403177-66403196 Msa1031680:CDS 30.0%
ATAAACAAGAAGTGGAAAGA+AGG + chr7_1:66403185-66403204 Msa1031680:CDS 30.0%
TAAACAAGAAGTGGAAAGAA+GGG + chr7_1:66403186-66403205 Msa1031680:CDS 30.0%
! ATTTCTCATTTGGTGATTCA+AGG + chr7_1:66403360-66403379 Msa1031680:intron 30.0%
! AATTATTTTCCCATCTTCGA+TGG - chr7_1:66403423-66403442 None:intergenic 30.0%
GAAGATGGGAAAATAATTAC+CGG + chr7_1:66403425-66403444 Msa1031680:CDS 30.0%
TAATTACCGGATTACTTCTA+TGG + chr7_1:66403438-66403457 Msa1031680:CDS 30.0%
AAGAAGGAAAAACAGAAAAG+GGG - chr7_1:66403722-66403741 None:intergenic 30.0%
! TTTTAGGCTTGAAAACAATC+AGG - chr7_1:66403880-66403899 None:intergenic 30.0%
TATATTGCCTCGATATGTTA+TGG + chr7_1:66404008-66404027 Msa1031680:CDS 30.0%
ATATTGCCTCGATATGTTAT+GGG + chr7_1:66404009-66404028 Msa1031680:CDS 30.0%
!! AACATTTGCTATATCCTTCT+TGG + chr7_1:66404058-66404077 Msa1031680:three_prime_UTR 30.0%
TATATCCTTCTTGGAAAGAT+GGG + chr7_1:66404067-66404086 Msa1031680:three_prime_UTR 30.0%
GTGATGATTAAAGTTGGAAT+GGG + chr7_1:66404095-66404114 Msa1031680:three_prime_UTR 30.0%
CATACCATACTACATTTGCA+TGG + chr7_1:66397783-66397802 Msa1031680:five_prime_UTR 35.0%
! ATATGGGTTAACCTTGTGTT+CGG - chr7_1:66397931-66397950 None:intergenic 35.0%
TGAAATTAGGGTTCGTGAAA+TGG - chr7_1:66397976-66397995 None:intergenic 35.0%
!! GTGAAGAGTTGTTTTCAGTA+TGG - chr7_1:66398024-66398043 None:intergenic 35.0%
!!! TTGTTTTTTTTCCGATCGGT+TGG + chr7_1:66398268-66398287 Msa1031680:intron 35.0%
! AAGTAATTGGTGTGATTTGC+AGG + chr7_1:66398439-66398458 Msa1031680:intron 35.0%
!! GAGTGTAGTTTGCTGAAATT+TGG + chr7_1:66398659-66398678 Msa1031680:intron 35.0%
!!! GTTGTTGTTTTTGCCGAAAA+AGG + chr7_1:66398771-66398790 Msa1031680:intron 35.0%
! ATTCAACGAGACACCTTTTT+CGG - chr7_1:66398787-66398806 None:intergenic 35.0%
!!! GGATTTTTTTGCTGTTTTCG+GGG + chr7_1:66398853-66398872 Msa1031680:five_prime_UTR 35.0%
!!! GATTTTTTTGCTGTTTTCGG+GGG + chr7_1:66398854-66398873 Msa1031680:five_prime_UTR 35.0%
TGTTGATCAAGGAGAGAATT+GGG + chr7_1:66398979-66398998 Msa1031680:CDS 35.0%
ACCTGTTTACAATAACGTAG+AGG + chr7_1:66399207-66399226 Msa1031680:CDS 35.0%
ACCTCTACGTTATTGTAAAC+AGG - chr7_1:66399211-66399230 None:intergenic 35.0%
TTACAATAACGTAGAGGTAG+TGG + chr7_1:66399213-66399232 Msa1031680:CDS 35.0%
CTCCATCGCAATGTTATTAT+TGG - chr7_1:66399239-66399258 None:intergenic 35.0%
CAATAATAACATTGCGATGG+AGG + chr7_1:66399237-66399256 Msa1031680:CDS 35.0%
ATAAAGAAGATACCCTCTCA+GGG - chr7_1:66399318-66399337 None:intergenic 35.0%
AATAAAGAAGATACCCTCTC+AGG - chr7_1:66399319-66399338 None:intergenic 35.0%
! TGAGATGGTAATCGAGATTT+TGG + chr7_1:66399503-66399522 Msa1031680:intron 35.0%
TAACTCTTTCATGGATGAAC+TGG - chr7_1:66399571-66399590 None:intergenic 35.0%
!! GGATGTTGATAACTCTTTCA+TGG - chr7_1:66399580-66399599 None:intergenic 35.0%
TCCTGTCAGTATAGATTTGT+TGG + chr7_1:66399597-66399616 Msa1031680:intron 35.0%
ACCAACAAATCTATACTGAC+AGG - chr7_1:66399601-66399620 None:intergenic 35.0%
ATATTTATGCAGGTGCAAGT+TGG + chr7_1:66399643-66399662 Msa1031680:intron 35.0%
TTCCTTTCTGTCTTGTATAC+AGG - chr7_1:66399676-66399695 None:intergenic 35.0%
ATACAAGACAGAAAGGAAGT+TGG + chr7_1:66399678-66399697 Msa1031680:CDS 35.0%
TACAAGACAGAAAGGAAGTT+GGG + chr7_1:66399679-66399698 Msa1031680:CDS 35.0%
GCTTTGATAAGCAATCTGAA+TGG + chr7_1:66400092-66400111 Msa1031680:intron 35.0%
! CAGCCAATATACGTTGATAA+AGG - chr7_1:66400197-66400216 None:intergenic 35.0%
CTTTATCAACGTATATTGGC+TGG + chr7_1:66400195-66400214 Msa1031680:intron 35.0%
!!! TGGCTGGTTCTTTTTTCTAA+AGG + chr7_1:66400211-66400230 Msa1031680:intron 35.0%
!! TTTCAGGTTATGGACATACT+TGG + chr7_1:66400245-66400264 Msa1031680:intron 35.0%
! TTCAGGTTATGGACATACTT+GGG + chr7_1:66400246-66400265 Msa1031680:intron 35.0%
TCTTGGTCAATCGTAAGATT+TGG + chr7_1:66400295-66400314 Msa1031680:intron 35.0%
TCGAGATGATAAAAGTTCAG+TGG - chr7_1:66400390-66400409 None:intergenic 35.0%
! TGAACTTTTATCATCTCGAC+AGG + chr7_1:66400391-66400410 Msa1031680:intron 35.0%
TTGAGAAGCTCCATTTGAAA+GGG + chr7_1:66400463-66400482 Msa1031680:CDS 35.0%
! GAAACTTGTGTCATTGAATC+AGG + chr7_1:66400570-66400589 Msa1031680:intron 35.0%
! TGACCAAGCAAAAAGTTTTC+TGG - chr7_1:66400617-66400636 None:intergenic 35.0%
! AACTAACTGGGTTGAAAAGA+CGG - chr7_1:66400695-66400714 None:intergenic 35.0%
GTGGAAACACAAAACTAACT+GGG - chr7_1:66400707-66400726 None:intergenic 35.0%
AGTGGAAACACAAAACTAAC+TGG - chr7_1:66400708-66400727 None:intergenic 35.0%
TGTTGTCTTCAGCTTCTAAA+TGG + chr7_1:66400817-66400836 Msa1031680:intron 35.0%
ATCAGAGACCTGATATATTC+AGG + chr7_1:66400874-66400893 Msa1031680:CDS 35.0%
! GATAATATGCCTTTTTGTGC+AGG + chr7_1:66400955-66400974 Msa1031680:intron 35.0%
! TAATATGCCTTTTTGTGCAG+GGG + chr7_1:66400957-66400976 Msa1031680:intron 35.0%
TTATTGTCACCCTGTAGATT+GGG - chr7_1:66401195-66401214 None:intergenic 35.0%
TTTATTGTCACCCTGTAGAT+TGG - chr7_1:66401196-66401215 None:intergenic 35.0%
! TTCTAGGAACAGCTTAAATG+GGG - chr7_1:66401283-66401302 None:intergenic 35.0%
! CTTCTAGGAACAGCTTAAAT+GGG - chr7_1:66401284-66401303 None:intergenic 35.0%
TCATGTTAGTAACTGCTTCT+AGG - chr7_1:66401299-66401318 None:intergenic 35.0%
!! ATATAGGTTGGTCAAAAACG+AGG + chr7_1:66401516-66401535 Msa1031680:intron 35.0%
AGGAAGGATGCTTATTAATC+TGG + chr7_1:66401536-66401555 Msa1031680:CDS 35.0%
! CCTAAGAAAAAAGTGCGATT+GGG + chr7_1:66401573-66401592 Msa1031680:CDS 35.0%
ATCAATTACCTCTGCTTCAT+AGG - chr7_1:66401642-66401661 None:intergenic 35.0%
AGAAACAGCAAAGCAAAACT+AGG - chr7_1:66401751-66401770 None:intergenic 35.0%
TCTAATAAACAACCCTTTGC+GGG - chr7_1:66401887-66401906 None:intergenic 35.0%
GGAATGCAATAATTGATGCA+TGG + chr7_1:66402189-66402208 Msa1031680:intron 35.0%
AATACGAAGAGAAAAGAAGG+AGG - chr7_1:66402376-66402395 None:intergenic 35.0%
GACAATACGAAGAGAAAAGA+AGG - chr7_1:66402379-66402398 None:intergenic 35.0%
! AAGGTAATGGTGACAATGAT+AGG - chr7_1:66402450-66402469 None:intergenic 35.0%
GCTTCTACAGACAACTTAAA+TGG - chr7_1:66402583-66402602 None:intergenic 35.0%
AATTGTAGACTTACACCACA+AGG + chr7_1:66402610-66402629 Msa1031680:intron 35.0%
ATTGTAGACTTACACCACAA+GGG + chr7_1:66402611-66402630 Msa1031680:intron 35.0%
AAAAAAATGGCAAACCCTTG+TGG - chr7_1:66402628-66402647 None:intergenic 35.0%
! CGGCAGTGTATACATTTTTA+TGG + chr7_1:66402804-66402823 Msa1031680:intron 35.0%
AATTTCATGTTGGAGACATG+TGG + chr7_1:66402904-66402923 Msa1031680:intron 35.0%
!! CTCCCAAATTGTTTTATCAG+GGG + chr7_1:66403009-66403028 Msa1031680:intron 35.0%
!! TCCCAAATTGTTTTATCAGG+GGG + chr7_1:66403010-66403029 Msa1031680:intron 35.0%
ACCCCCTGATAAAACAATTT+GGG - chr7_1:66403014-66403033 None:intergenic 35.0%
AACCCCCTGATAAAACAATT+TGG - chr7_1:66403015-66403034 None:intergenic 35.0%
!! TATACTGTTTTTCTCATCCC+AGG - chr7_1:66403051-66403070 None:intergenic 35.0%
AAATGATTCGCTCACTTTGT+AGG - chr7_1:66403153-66403172 None:intergenic 35.0%
GCGAATCATTTCCTTTCAAA+TGG + chr7_1:66403162-66403181 Msa1031680:CDS 35.0%
! GACTTTTTGTATCCAAGTGA+AGG + chr7_1:66403394-66403413 Msa1031680:CDS 35.0%
! TTTTGGTATGCTGAGTATGA+AGG - chr7_1:66403485-66403504 None:intergenic 35.0%
!! TCGTCTAGTAATTTGCGTTT+TGG - chr7_1:66403502-66403521 None:intergenic 35.0%
!! TGTATTTTAAGCATGCCTGA+TGG + chr7_1:66403613-66403632 Msa1031680:intron 35.0%
!! AAACCTAGTTTTTACAGCCA+AGG + chr7_1:66403643-66403662 Msa1031680:intron 35.0%
!! AACCTAGTTTTTACAGCCAA+GGG + chr7_1:66403644-66403663 Msa1031680:intron 35.0%
AGAAGGAAAAACAGAAAAGG+GGG - chr7_1:66403721-66403740 None:intergenic 35.0%
! TTTGCTCTACTTCTAGTTGT+TGG + chr7_1:66403921-66403940 Msa1031680:intron 35.0%
! TTGCTCTACTTCTAGTTGTT+GGG + chr7_1:66403922-66403941 Msa1031680:intron 35.0%
CTATATCCTTCTTGGAAAGA+TGG + chr7_1:66404066-66404085 Msa1031680:three_prime_UTR 35.0%
CGTGATGATTAAAGTTGGAA+TGG + chr7_1:66404094-66404113 Msa1031680:three_prime_UTR 35.0%
TGATTAAAGTTGGAATGGGT+AGG + chr7_1:66404099-66404118 Msa1031680:three_prime_UTR 35.0%
GATTAAAGTTGGAATGGGTA+GGG + chr7_1:66404100-66404119 Msa1031680:three_prime_UTR 35.0%
GAAAGATAAAGGATAAGGCT+TGG + chr7_1:66404198-66404217 Msa1031680:intron 35.0%
TGCACCATGCAAATGTAGTA+TGG - chr7_1:66397790-66397809 None:intergenic 40.0%
AATGGTGAGATTATTGGTGG+TGG - chr7_1:66397831-66397850 None:intergenic 40.0%
! GGTAATGGTGAGATTATTGG+TGG - chr7_1:66397834-66397853 None:intergenic 40.0%
! TGCGGTAATGGTGAGATTAT+TGG - chr7_1:66397837-66397856 None:intergenic 40.0%
GATGAAGAAAAGAGAGGATG+CGG - chr7_1:66397855-66397874 None:intergenic 40.0%
TCAGTATGGAGAAGAAAGCA+TGG - chr7_1:66398010-66398029 None:intergenic 40.0%
AGCTCCAAAAATGGAAGGAT+CGG - chr7_1:66398148-66398167 None:intergenic 40.0%
GTGACAAAAATCCAACCGAT+CGG - chr7_1:66398282-66398301 None:intergenic 40.0%
! TGGATTTTTGTCACCGATGA+CGG + chr7_1:66398288-66398307 Msa1031680:intron 40.0%
CAATTCTCTCCTTGATCAAC+AGG - chr7_1:66398980-66398999 None:intergenic 40.0%
CTGTTGATCAAGGAGAGAAT+TGG + chr7_1:66398978-66398997 Msa1031680:CDS 40.0%
AATGCCACAGGTTTAGGTAA+AGG + chr7_1:66399061-66399080 Msa1031680:CDS 40.0%
ATGCCACAGGTTTAGGTAAA+GGG + chr7_1:66399062-66399081 Msa1031680:CDS 40.0%
AATCAATCAATCTTGCTCCG+CGG - chr7_1:66399132-66399151 None:intergenic 40.0%
CGGAGCAAGATTGATTGATT+TGG + chr7_1:66399132-66399151 Msa1031680:CDS 40.0%
!! TTAATGCAACAGGTTCTGGA+AGG - chr7_1:66399177-66399196 None:intergenic 40.0%
TTCCAGAACCTGTTGCATTA+AGG + chr7_1:66399176-66399195 Msa1031680:CDS 40.0%
TCCAGAACCTGTTGCATTAA+GGG + chr7_1:66399177-66399196 Msa1031680:CDS 40.0%
GGCCAATAATAACATTGCGA+TGG + chr7_1:66399234-66399253 Msa1031680:CDS 40.0%
CTCCTGTATACAAGACAGAA+AGG + chr7_1:66399671-66399690 Msa1031680:CDS 40.0%
ACAGAAAGGAAGTTGGGTAA+GGG + chr7_1:66399685-66399704 Msa1031680:CDS 40.0%
CCAAGTTTATGTTGGCAGAA+GGG + chr7_1:66399717-66399736 Msa1031680:CDS 40.0%
AGTAATACCTCCATAGCATC+AGG - chr7_1:66399769-66399788 None:intergenic 40.0%
CTGTAAACTTGCCACTCATA+GGG - chr7_1:66399962-66399981 None:intergenic 40.0%
AGCAATCTGAATGGCTGTTA+TGG + chr7_1:66400101-66400120 Msa1031680:intron 40.0%
GAGAATTCCATACATCCCAA+AGG - chr7_1:66400277-66400296 None:intergenic 40.0%
TGGGATGTATGGAATTCTCT+TGG + chr7_1:66400278-66400297 Msa1031680:CDS 40.0%
AAAGTTCAGTGGAGCCAAAA+TGG - chr7_1:66400379-66400398 None:intergenic 40.0%
CTTGAGAAGCTCCATTTGAA+AGG + chr7_1:66400462-66400481 Msa1031680:CDS 40.0%
CATTGAATCAGGTTTGTGCA+CGG + chr7_1:66400581-66400600 Msa1031680:intron 40.0%
! AACTTTTTGCTTGGTCAACC+TGG + chr7_1:66400620-66400639 Msa1031680:CDS 40.0%
TAGAAGCTGAAGACAACACA+TGG - chr7_1:66400815-66400834 None:intergenic 40.0%
GTCTTCAGCTTCTAAATGGA+AGG + chr7_1:66400821-66400840 Msa1031680:intron 40.0%
AAATGGAAGGATGCATCATC+TGG + chr7_1:66400834-66400853 Msa1031680:CDS 40.0%
GCTAGTGTACATGCACATTT+AGG + chr7_1:66400993-66401012 Msa1031680:CDS 40.0%
GTGTACATGCACATTTAGGT+AGG + chr7_1:66400997-66401016 Msa1031680:CDS 40.0%
TATTGTCACCCTGTAGATTG+GGG - chr7_1:66401194-66401213 None:intergenic 40.0%
GAAAAAAATGTCCACTTCCG+CGG + chr7_1:66401233-66401252 Msa1031680:CDS 40.0%
! GCTTCTAGGAACAGCTTAAA+TGG - chr7_1:66401285-66401304 None:intergenic 40.0%
! GCCTAAGAAAAAAGTGCGAT+TGG + chr7_1:66401572-66401591 Msa1031680:CDS 40.0%
!!! CCCAATCGCACTTTTTTCTT+AGG - chr7_1:66401576-66401595 None:intergenic 40.0%
ATTACCTCTGCTTCATAGGA+CGG - chr7_1:66401638-66401657 None:intergenic 40.0%
CTAATAAACAACCCTTTGCG+GGG - chr7_1:66401886-66401905 None:intergenic 40.0%
TGGGTTGTATATAAGCTGTG+TGG + chr7_1:66402020-66402039 Msa1031680:CDS 40.0%
CGGTGACAACTCATAAACTT+GGG - chr7_1:66402100-66402119 None:intergenic 40.0%
CCAAGTTTATGAGTTGTCAC+CGG + chr7_1:66402098-66402117 Msa1031680:CDS 40.0%
!!! TATTTTGACGACCTCAGGAT+TGG + chr7_1:66402219-66402238 Msa1031680:intron 40.0%
AGGATTGGATTATGGAGCAA+TGG + chr7_1:66402234-66402253 Msa1031680:intron 40.0%
GGATTGGATTATGGAGCAAT+GGG + chr7_1:66402235-66402254 Msa1031680:intron 40.0%
TCAATAGCTGGTGCAGTTAA+TGG + chr7_1:66402278-66402297 Msa1031680:CDS 40.0%
GGGTGTAATGATCAAACCTT+TGG - chr7_1:66402324-66402343 None:intergenic 40.0%
TGTTGCTAAGGTGAAGGTAA+TGG - chr7_1:66402463-66402482 None:intergenic 40.0%
AATGTATACACTGCCGAAGT+GGG - chr7_1:66402800-66402819 None:intergenic 40.0%
AAATGTATACACTGCCGAAG+TGG - chr7_1:66402801-66402820 None:intergenic 40.0%
GTAGGAAAGCAGATTGAACA+TGG - chr7_1:66402864-66402883 None:intergenic 40.0%
! GGTTCTTTTCTTTTCCTCCT+GGG + chr7_1:66403031-66403050 Msa1031680:intron 40.0%
TTGTAGGACTGCTGTGTATA+AGG - chr7_1:66403137-66403156 None:intergenic 40.0%
TTGTTATGTCCAGGAATGCT+GGG + chr7_1:66403252-66403271 Msa1031680:CDS 40.0%
! CATTTGGTGATTCAAGGTTG+TGG + chr7_1:66403366-66403385 Msa1031680:intron 40.0%
TGAAGGAATCCATCGAAGAT+GGG + chr7_1:66403411-66403430 Msa1031680:CDS 40.0%
TAGCAGCCATAGAAGTAATC+CGG - chr7_1:66403447-66403466 None:intergenic 40.0%
TATGGCTGCTACTAATGATC+AGG + chr7_1:66403456-66403475 Msa1031680:CDS 40.0%
ATACCTTTACATGGGTGCTA+GGG - chr7_1:66403555-66403574 None:intergenic 40.0%
TATACCTTTACATGGGTGCT+AGG - chr7_1:66403556-66403575 None:intergenic 40.0%
!! ACCTAGTTTTTACAGCCAAG+GGG + chr7_1:66403645-66403664 Msa1031680:intron 40.0%
TCAGTGGAGAATTGTAGTTG+AGG + chr7_1:66403791-66403810 Msa1031680:intron 40.0%
!! ATCCTACTTGATGGTTTTGC+AGG + chr7_1:66403965-66403984 Msa1031680:intron 40.0%
!! TGATGGTTTTGCAGGAGAAA+TGG + chr7_1:66403973-66403992 Msa1031680:intron 40.0%
CGAGGCAATATAGAGATTCT+TGG - chr7_1:66404000-66404019 None:intergenic 40.0%
GAGGACGTGATGATTAAAGT+TGG + chr7_1:66404089-66404108 Msa1031680:three_prime_UTR 40.0%
!! GTGTAACATTTTAAAGGGGC+TGG + chr7_1:66404325-66404344 Msa1031680:three_prime_UTR 40.0%
!!! TTTAAAGGGGCTGGCTATTT+TGG + chr7_1:66404334-66404353 Msa1031680:three_prime_UTR 40.0%
!!! GCTATTTTGGCCATGTTTCT+TGG + chr7_1:66404347-66404366 Msa1031680:three_prime_UTR 40.0%
!! ATTATTGGTGGTGGTGGTGT+TGG - chr7_1:66397822-66397841 None:intergenic 45.0%
GAAAAGAGAGGATGCGGTAA+TGG - chr7_1:66397849-66397868 None:intergenic 45.0%
AGCGATGAAAGTAACGATCG+TGG - chr7_1:66398095-66398114 None:intergenic 45.0%
! GATCGGGTTGCAATTGAATC+AGG - chr7_1:66398131-66398150 None:intergenic 45.0%
! CAACCCGATCCTTCCATTTT+TGG + chr7_1:66398141-66398160 Msa1031680:five_prime_UTR 45.0%
GCTCCAAAAATGGAAGGATC+GGG - chr7_1:66398147-66398166 None:intergenic 45.0%
AAAACTCACAGATCGAGACG+TGG - chr7_1:66398171-66398190 None:intergenic 45.0%
ATATGTGGCATGTTCGCGTT+TGG + chr7_1:66398220-66398239 Msa1031680:intron 45.0%
! AACGCGGGCTATGATTTGAA+TGG + chr7_1:66398881-66398900 Msa1031680:five_prime_UTR 45.0%
! ACGCGGGCTATGATTTGAAT+GGG + chr7_1:66398882-66398901 Msa1031680:five_prime_UTR 45.0%
GCTATGATTTGAATGGGGAG+AGG + chr7_1:66398888-66398907 Msa1031680:five_prime_UTR 45.0%
AGTTGAGAAGTGGAGCAAGA+AGG + chr7_1:66398918-66398937 Msa1031680:CDS 45.0%
TCTCCTTGATCAACAGGTTG+TGG - chr7_1:66398974-66398993 None:intergenic 45.0%
AACAGAACTAGGAGGAGAGT+TGG + chr7_1:66399016-66399035 Msa1031680:CDS 45.0%
AGACCCTTTACCTAAACCTG+TGG - chr7_1:66399068-66399087 None:intergenic 45.0%
AATAACATTGCGATGGAGGG+TGG + chr7_1:66399241-66399260 Msa1031680:CDS 45.0%
AGGGTGGAAGTGGTGATAAA+GGG + chr7_1:66399257-66399276 Msa1031680:CDS 45.0%
GACAGAAAGGAAGTTGGGTA+AGG + chr7_1:66399684-66399703 Msa1031680:CDS 45.0%
GGTTTCGGCCAAGTTTATGT+TGG + chr7_1:66399709-66399728 Msa1031680:CDS 45.0%
GCCAAGTTTATGTTGGCAGA+AGG + chr7_1:66399716-66399735 Msa1031680:CDS 45.0%
CCCTTCTGCCAACATAAACT+TGG - chr7_1:66399720-66399739 None:intergenic 45.0%
TATGTTGGCAGAAGGGTTAG+TGG + chr7_1:66399724-66399743 Msa1031680:CDS 45.0%
GAAAGACAGACAGAGAGAGA+GGG - chr7_1:66399816-66399835 None:intergenic 45.0%
CTCTCTCTCTGTCTGTCTTT+CGG + chr7_1:66399815-66399834 Msa1031680:intron 45.0%
TAAACTTGCCACTCATAGGG+AGG - chr7_1:66399959-66399978 None:intergenic 45.0%
CCTGTAAACTTGCCACTCAT+AGG - chr7_1:66399963-66399982 None:intergenic 45.0%
CCTATGAGTGGCAAGTTTAC+AGG + chr7_1:66399960-66399979 Msa1031680:CDS 45.0%
AATGGCTGTTATGGCATTCC+CGG + chr7_1:66400110-66400129 Msa1031680:CDS 45.0%
ATTCCCGGGGTTCATTACAA+GGG + chr7_1:66400125-66400144 Msa1031680:CDS 45.0%
GTTCATTACAAGGGTCGACA+AGG + chr7_1:66400134-66400153 Msa1031680:CDS 45.0%
TTCCATACATCCCAAAGGCT+GGG - chr7_1:66400272-66400291 None:intergenic 45.0%
ATTCCATACATCCCAAAGGC+TGG - chr7_1:66400273-66400292 None:intergenic 45.0%
TTTGCTTGGTCAACCTGGAA+CGG + chr7_1:66400625-66400644 Msa1031680:CDS 45.0%
TTCTTATCATCAGCCGTTCC+AGG - chr7_1:66400641-66400660 None:intergenic 45.0%
GCTGAAGACAACACATGGTA+TGG - chr7_1:66400810-66400829 None:intergenic 45.0%
TATCGTTCCCCTGCACAAAA+AGG - chr7_1:66400967-66400986 None:intergenic 45.0%
CATGCACATTTAGGTAGGAC+TGG + chr7_1:66401002-66401021 Msa1031680:CDS 45.0%
AAGGGATGATCTTGAGTCAC+TGG + chr7_1:66401031-66401050 Msa1031680:CDS 45.0%
TCATAAAAGGGAGATTGCCG+TGG + chr7_1:66401072-66401091 Msa1031680:CDS 45.0%
TCTCTTTCCCCCAATCTACA+GGG + chr7_1:66401183-66401202 Msa1031680:intron 45.0%
ATTGTCACCCTGTAGATTGG+GGG - chr7_1:66401193-66401212 None:intergenic 45.0%
AAAGCAACACATCAACTCCG+CGG - chr7_1:66401253-66401272 None:intergenic 45.0%
TAGGAACAGCTTAAATGGGG+CGG - chr7_1:66401280-66401299 None:intergenic 45.0%
ATAGGTCTCAATGGAGTGCA+TGG - chr7_1:66401381-66401400 None:intergenic 45.0%
! AGGTTGGTCAAAAACGAGGA+AGG + chr7_1:66401520-66401539 Msa1031680:intron 45.0%
ACTGATATCCACTGAGTAGC+AGG - chr7_1:66401603-66401622 None:intergenic 45.0%
!!! CTTCCATTTTCTGGCTCCAA+AGG + chr7_1:66401787-66401806 Msa1031680:intron 45.0%
!!! ATTTTCTGGCTCCAAAGGCT+GGG + chr7_1:66401792-66401811 Msa1031680:intron 45.0%
CAAAGCAGATGGAGAACTCA+GGG - chr7_1:66401844-66401863 None:intergenic 45.0%
ACAAAGCAGATGGAGAACTC+AGG - chr7_1:66401845-66401864 None:intergenic 45.0%
GCATCGTGTAACAAAGCAGA+TGG - chr7_1:66401855-66401874 None:intergenic 45.0%
ATGCATCATATTCCCCGCAA+AGG + chr7_1:66401871-66401890 Msa1031680:intron 45.0%
TGCATCATATTCCCCGCAAA+GGG + chr7_1:66401872-66401891 Msa1031680:intron 45.0%
!! TAGACAAGGGCATTGAGGAT+GGG + chr7_1:66402001-66402020 Msa1031680:CDS 45.0%
TGTTCCTGCATCCATGATCA+GGG - chr7_1:66402067-66402086 None:intergenic 45.0%
CCGGTGACAACTCATAAACT+TGG - chr7_1:66402101-66402120 None:intergenic 45.0%
AAAGAAAGCCAACCTTGTGC+AGG - chr7_1:66402128-66402147 None:intergenic 45.0%
ACGACCTCAGGATTGGATTA+TGG + chr7_1:66402226-66402245 Msa1031680:intron 45.0%
TGCTCCATAATCCAATCCTG+AGG - chr7_1:66402233-66402252 None:intergenic 45.0%
TGCAGTTAATGGCAGTTCCT+TGG + chr7_1:66402289-66402308 Msa1031680:CDS 45.0%
TCCTTGGTTGTCATGTCCAA+AGG + chr7_1:66402305-66402324 Msa1031680:CDS 45.0%
ACCTTTGGACATGACAACCA+AGG - chr7_1:66402309-66402328 None:intergenic 45.0%
CGAAGAGAAAAGAAGGAGGT+AGG - chr7_1:66402372-66402391 None:intergenic 45.0%
GAGCTTCATATGTGCAATCC+TGG + chr7_1:66402689-66402708 Msa1031680:intron 45.0%
TGTGCAATCCTGGACTCATT+TGG + chr7_1:66402699-66402718 Msa1031680:intron 45.0%
CTTAGACCAGGCTTCTTGAA+GGG - chr7_1:66402727-66402746 None:intergenic 45.0%
ACTTAGACCAGGCTTCTTGA+AGG - chr7_1:66402728-66402747 None:intergenic 45.0%
! CCAATCTAAGGAGCATGAGT+AGG - chr7_1:66402882-66402901 None:intergenic 45.0%
CCTACTCATGCTCCTTAGAT+TGG + chr7_1:66402879-66402898 Msa1031680:intron 45.0%
!! TCAAGGAAGTGTTGTCTCGT+AGG - chr7_1:66402951-66402970 None:intergenic 45.0%
! GGGTTCTTTTCTTTTCCTCC+TGG + chr7_1:66403030-66403049 Msa1031680:intron 45.0%
!! ACTGTTTTTCTCATCCCAGG+AGG - chr7_1:66403048-66403067 None:intergenic 45.0%
! TGGTAGAATCCTTGTTGTGC+AGG + chr7_1:66403107-66403126 Msa1031680:intron 45.0%
TAAGGAGTTCCTGCACAACA+AGG - chr7_1:66403119-66403138 None:intergenic 45.0%
GTTGTTATGTCCAGGAATGC+TGG + chr7_1:66403251-66403270 Msa1031680:CDS 45.0%
ATCAGAATACCCAGCATTCC+TGG - chr7_1:66403264-66403283 None:intergenic 45.0%
GAATGCTGGGTATTCTGATC+AGG + chr7_1:66403265-66403284 Msa1031680:CDS 45.0%
! CTTCGATGGATTCCTTCACT+TGG - chr7_1:66403409-66403428 None:intergenic 45.0%
GTGAAGGAATCCATCGAAGA+TGG + chr7_1:66403410-66403429 Msa1031680:CDS 45.0%
TTTCCCTAGCACCCATGTAA+AGG + chr7_1:66403549-66403568 Msa1031680:CDS 45.0%
TCCCCTTGGCTGTAAAAACT+AGG - chr7_1:66403649-66403668 None:intergenic 45.0%
GAAAAGGGGGAGAATAGAAG+TGG - chr7_1:66403708-66403727 None:intergenic 45.0%
CTCCTGCAAAACCATCAAGT+AGG - chr7_1:66403970-66403989 None:intergenic 45.0%
AGTTCGCCCATAACATATCG+AGG - chr7_1:66404018-66404037 None:intergenic 45.0%
ATCCTTCTTGGAAAGATGGG+AGG + chr7_1:66404070-66404089 Msa1031680:three_prime_UTR 45.0%
!!! AGACTTTTTCGGCAGTGACT+GGG - chr7_1:66404141-66404160 None:intergenic 45.0%
!!! AAGACTTTTTCGGCAGTGAC+TGG - chr7_1:66404142-66404161 None:intergenic 45.0%
AAGTGAGCTATGCTGTGTGA+GGG + chr7_1:66404268-66404287 Msa1031680:three_prime_UTR 45.0%
TAAAGCACGGCCAAGAAACA+TGG - chr7_1:66404360-66404379 None:intergenic 45.0%
TGCACGACATCAAAGCAACT+GGG + chr7_1:66404502-66404521 Msa1031680:three_prime_UTR 45.0%
!!! TATTTTTTATTTATTTTTTC+CGG + chr7_1:66402509-66402528 Msa1031680:intron 5.0%
!! GGTGAGATTATTGGTGGTGG+TGG - chr7_1:66397828-66397847 None:intergenic 50.0%
CGTGGAGCTCCAAAAATGGA+AGG - chr7_1:66398153-66398172 None:intergenic 50.0%
GAGACGTGGAGCTCCAAAAA+TGG - chr7_1:66398157-66398176 None:intergenic 50.0%
AAACATTTGCGTGTGACGCG+TGG + chr7_1:66398749-66398768 Msa1031680:intron 50.0%
!! TGTTTTCGGGGGCTATAACG+CGG + chr7_1:66398865-66398884 Msa1031680:five_prime_UTR 50.0%
! CGCGGGCTATGATTTGAATG+GGG + chr7_1:66398883-66398902 Msa1031680:five_prime_UTR 50.0%
AGGATGCCAGAGTTGAGAAG+TGG + chr7_1:66398908-66398927 Msa1031680:exon 50.0%
CTTGCTCCACTTCTCAACTC+TGG - chr7_1:66398917-66398936 None:intergenic 50.0%
GTGGAGCAAGAAGGTCAAAG+CGG + chr7_1:66398927-66398946 Msa1031680:CDS 50.0%
TGATCAACAGGTTGTGGACC+AGG - chr7_1:66398968-66398987 None:intergenic 50.0%
GGTCCACAACCTGTTGATCA+AGG + chr7_1:66398968-66398987 Msa1031680:CDS 50.0%
AGAACTAGGAGGAGAGTTGG+AGG + chr7_1:66399019-66399038 Msa1031680:CDS 50.0%
!! ATGCAACAGGTTCTGGAAGG+AGG - chr7_1:66399174-66399193 None:intergenic 50.0%
GCCCTTAATGCAACAGGTTC+TGG - chr7_1:66399181-66399200 None:intergenic 50.0%
GAGGGTGGAAGTGGTGATAA+AGG + chr7_1:66399256-66399275 Msa1031680:CDS 50.0%
GGGTGGAAGTGGTGATAAAG+GGG + chr7_1:66399258-66399277 Msa1031680:CDS 50.0%
TGGAAGTGGTGATAAAGGGG+TGG + chr7_1:66399261-66399280 Msa1031680:CDS 50.0%
AAGATACCCTCTCAGGGACA+GGG - chr7_1:66399312-66399331 None:intergenic 50.0%
!! GAGCTGTTCTGGAACTGAGA+TGG + chr7_1:66399488-66399507 Msa1031680:intron 50.0%
GAAAGGAAGTTGGGTAAGGG+CGG + chr7_1:66399688-66399707 Msa1031680:CDS 50.0%
AAGTTGGGTAAGGGCGGTTT+CGG + chr7_1:66399694-66399713 Msa1031680:CDS 50.0%
TCGAGTAGGTCCTGATGCTA+TGG + chr7_1:66399756-66399775 Msa1031680:CDS 50.0%
AGTAGGTCCTGATGCTATGG+AGG + chr7_1:66399759-66399778 Msa1031680:CDS 50.0%
CGAAAGACAGACAGAGAGAG+AGG - chr7_1:66399817-66399836 None:intergenic 50.0%
ATTATGGGCCTCCCTATGAG+TGG + chr7_1:66399948-66399967 Msa1031680:CDS 50.0%
ATGGCTGTTATGGCATTCCC+GGG + chr7_1:66400111-66400130 Msa1031680:CDS 50.0%
CATTCCCGGGGTTCATTACA+AGG + chr7_1:66400124-66400143 Msa1031680:CDS 50.0%
TCGACCCTTGTAATGAACCC+CGG - chr7_1:66400132-66400151 None:intergenic 50.0%
CGACAGGATGTCACCAAGTA+TGG + chr7_1:66400407-66400426 Msa1031680:intron 50.0%
GCAATGCAAGCAGCCATACT+TGG - chr7_1:66400423-66400442 None:intergenic 50.0%
TATGGCTGCTTGCATTGCAG+TGG + chr7_1:66400425-66400444 Msa1031680:CDS 50.0%
CTCTCTTTCCCCCAATCTAC+AGG + chr7_1:66401182-66401201 Msa1031680:intron 50.0%
AGGAACAGCTTAAATGGGGC+GGG - chr7_1:66401279-66401298 None:intergenic 50.0%
!! CAGCCTTTGGAGCCAGAAAA+TGG - chr7_1:66401793-66401812 None:intergenic 50.0%
!!! CATTTTCTGGCTCCAAAGGC+TGG + chr7_1:66401791-66401810 Msa1031680:intron 50.0%
!!! TTTTCTGGCTCCAAAGGCTG+GGG + chr7_1:66401793-66401812 Msa1031680:intron 50.0%
AGATGGAGAACTCAGGGCAT+TGG - chr7_1:66401838-66401857 None:intergenic 50.0%
CTCCGTCAGCATGTAGACAA+GGG + chr7_1:66401988-66402007 Msa1031680:CDS 50.0%
TGCCCTTGTCTACATGCTGA+CGG - chr7_1:66401993-66402012 None:intergenic 50.0%
!! GCATGTAGACAAGGGCATTG+AGG + chr7_1:66401996-66402015 Msa1031680:CDS 50.0%
!! GTAGACAAGGGCATTGAGGA+TGG + chr7_1:66402000-66402019 Msa1031680:CDS 50.0%
TGGCCTCTTCAGCGAATTTG+TGG + chr7_1:66402040-66402059 Msa1031680:CDS 50.0%
GGCCTCTTCAGCGAATTTGT+GGG + chr7_1:66402041-66402060 Msa1031680:CDS 50.0%
GAATTTGTGGGCCCTGATCA+TGG + chr7_1:66402053-66402072 Msa1031680:CDS 50.0%
CTGTTCCTGCATCCATGATC+AGG - chr7_1:66402068-66402087 None:intergenic 50.0%
CTGATCATGGATGCAGGAAC+AGG + chr7_1:66402066-66402085 Msa1031680:CDS 50.0%
AAAGCCAACCTTGTGCAGGA+AGG - chr7_1:66402124-66402143 None:intergenic 50.0%
!!! GCTGCTATTTTGACGACCTC+AGG + chr7_1:66402214-66402233 Msa1031680:intron 50.0%
! GGCATGTGTTGCTAAGGTGA+AGG - chr7_1:66402469-66402488 None:intergenic 50.0%
! CGACTTGGCATGTGTTGCTA+AGG - chr7_1:66402475-66402494 None:intergenic 50.0%
TCTATCCCGAAACCTGCGTT+TGG + chr7_1:66402753-66402772 Msa1031680:intron 50.0%
CAAATAGGCTCTCCAAACGC+AGG - chr7_1:66402768-66402787 None:intergenic 50.0%
CAGTAGTCATGGAGGTGACA+TGG - chr7_1:66403214-66403233 None:intergenic 50.0%
GTGATTCAAGGTTGTGGAGC+TGG + chr7_1:66403372-66403391 Msa1031680:intron 50.0%
ACGAGACTCAAGAGACTCTG+CGG + chr7_1:66403518-66403537 Msa1031680:CDS 50.0%
! TAAGCATGCCTGATGGTGTC+TGG + chr7_1:66403620-66403639 Msa1031680:intron 50.0%
CTAGGTTTCCAGACACCATC+AGG - chr7_1:66403631-66403650 None:intergenic 50.0%
ACTGAGGACTCTTATCCCCT+TGG - chr7_1:66403663-66403682 None:intergenic 50.0%
ACAGTAGACTGTGAGGACTG+AGG - chr7_1:66403679-66403698 None:intergenic 50.0%
TCAGTCCTCACAGTCTACTG+TGG + chr7_1:66403678-66403697 Msa1031680:intron 50.0%
GAACACCACAGTAGACTGTG+AGG - chr7_1:66403686-66403705 None:intergenic 50.0%
GTCCTCCCATCTTTCCAAGA+AGG - chr7_1:66404075-66404094 None:intergenic 50.0%
TTCGGCAGTGACTGGGTTTA+GGG - chr7_1:66404134-66404153 None:intergenic 50.0%
TTTCGGCAGTGACTGGGTTT+AGG - chr7_1:66404135-66404154 None:intergenic 50.0%
GAAGTGAGCTATGCTGTGTG+AGG + chr7_1:66404267-66404286 Msa1031680:three_prime_UTR 50.0%
!! TGCACTGACTAGTCAAGGAC+TGG - chr7_1:66404486-66404505 None:intergenic 50.0%
!! TGTCGTGCACTGACTAGTCA+AGG - chr7_1:66404491-66404510 None:intergenic 50.0%
GTGCACGACATCAAAGCAAC+TGG + chr7_1:66404501-66404520 Msa1031680:three_prime_UTR 50.0%
GCACGACATCAAAGCAACTG+GGG + chr7_1:66404503-66404522 Msa1031680:three_prime_UTR 50.0%
!! GTTTTCGGGGGCTATAACGC+GGG + chr7_1:66398866-66398885 Msa1031680:five_prime_UTR 55.0%
GCAAGAAGGTCAAAGCGGCT+TGG + chr7_1:66398932-66398951 Msa1031680:CDS 55.0%
AGCCTGCGCAGAACAGAACT+AGG + chr7_1:66399005-66399024 Msa1031680:CDS 55.0%
!! CTCCTAGTTCTGTTCTGCGC+AGG - chr7_1:66399010-66399029 None:intergenic 55.0%
CTGCGCAGAACAGAACTAGG+AGG + chr7_1:66399008-66399027 Msa1031680:CDS 55.0%
ACTAGGAGGAGAGTTGGAGG+TGG + chr7_1:66399022-66399041 Msa1031680:CDS 55.0%
AGGAGAGTTGGAGGTGGAAG+AGG + chr7_1:66399028-66399047 Msa1031680:CDS 55.0%
GTTGGAGGTGGAAGAGGAAG+AGG + chr7_1:66399034-66399053 Msa1031680:CDS 55.0%
GGCGGTAATGCCACAGGTTT+AGG + chr7_1:66399055-66399074 Msa1031680:CDS 55.0%
AGACGAACTGCAGCTGGTAG+AGG + chr7_1:66399106-66399125 Msa1031680:CDS 55.0%
GGAAGGAGGTCACAAGGTTG+AGG - chr7_1:66399160-66399179 None:intergenic 55.0%
!! GGTTCTGGAAGGAGGTCACA+AGG - chr7_1:66399166-66399185 None:intergenic 55.0%
! ACCTGTTGCATTAAGGGCGC+AGG + chr7_1:66399183-66399202 Msa1031680:CDS 55.0%
TCCTGCGCCCTTAATGCAAC+AGG - chr7_1:66399187-66399206 None:intergenic 55.0%
ATTGCGATGGAGGGTGGAAG+TGG + chr7_1:66399247-66399266 Msa1031680:CDS 55.0%
AGATACCCTCTCAGGGACAG+GGG - chr7_1:66399311-66399330 None:intergenic 55.0%
GAAGATACCCTCTCAGGGAC+AGG - chr7_1:66399313-66399332 None:intergenic 55.0%
! GTTGGCAGAAGGGTTAGTGG+TGG + chr7_1:66399727-66399746 Msa1031680:CDS 55.0%
!! AGTGGTGGCTCTGATCGAGT+AGG + chr7_1:66399742-66399761 Msa1031680:CDS 55.0%
TGGCTGTTATGGCATTCCCG+GGG + chr7_1:66400112-66400131 Msa1031680:CDS 55.0%
CGACCCTTGTAATGAACCCC+GGG - chr7_1:66400131-66400150 None:intergenic 55.0%
ACATACTTGGGCCCAGCCTT+TGG + chr7_1:66400258-66400277 Msa1031680:CDS 55.0%
CATACTTGGGCCCAGCCTTT+GGG + chr7_1:66400259-66400278 Msa1031680:CDS 55.0%
! TAGGTAGGACTGGCAGTCGA+AGG + chr7_1:66401012-66401031 Msa1031680:CDS 55.0%
! AGGTAGGACTGGCAGTCGAA+GGG + chr7_1:66401013-66401032 Msa1031680:CDS 55.0%
AAAAGGGAGATTGCCGTGGC+AGG + chr7_1:66401076-66401095 Msa1031680:CDS 55.0%
AAAGGGAGATTGCCGTGGCA+GGG + chr7_1:66401077-66401096 Msa1031680:CDS 55.0%
ATTGCCGTGGCAGGGTTATC+AGG + chr7_1:66401085-66401104 Msa1031680:CDS 55.0%
ACACATCAACTCCGCGGAAG+TGG - chr7_1:66401247-66401266 None:intergenic 55.0%
TGGGTAGTCCTGCTACTCAG+TGG + chr7_1:66401592-66401611 Msa1031680:CDS 55.0%
!! TTTCTGGCTCCAAAGGCTGG+GGG + chr7_1:66401794-66401813 Msa1031680:intron 55.0%
CAGTGATATCCCCCAGCCTT+TGG - chr7_1:66401806-66401825 None:intergenic 55.0%
!! GAGAACTCAGGGCATTGGCT+TGG - chr7_1:66401833-66401852 None:intergenic 55.0%
GCTCCGTCAGCATGTAGACA+AGG + chr7_1:66401987-66402006 Msa1031680:CDS 55.0%
GGCCCACAAATTCGCTGAAG+AGG - chr7_1:66402046-66402065 None:intergenic 55.0%
GAAGGGAGCCAAATGAGTCC+AGG - chr7_1:66402710-66402729 None:intergenic 55.0%
TTGGCTCCCTTCAAGAAGCC+TGG + chr7_1:66402718-66402737 Msa1031680:intron 55.0%
GCTCTCCAAACGCAGGTTTC+GGG - chr7_1:66402761-66402780 None:intergenic 55.0%
GGCTCTCCAAACGCAGGTTT+CGG - chr7_1:66402762-66402781 None:intergenic 55.0%
GGAGAGCCTATTTGCCTCCT+TGG + chr7_1:66402774-66402793 Msa1031680:intron 55.0%
AGTGGGCCAAGGAGGCAAAT+AGG - chr7_1:66402783-66402802 None:intergenic 55.0%
TTTGCCTCCTTGGCCCACTT+CGG + chr7_1:66402784-66402803 Msa1031680:intron 55.0%
GTCACCTCCATGACTACTGC+TGG + chr7_1:66403215-66403234 Msa1031680:CDS 55.0%
ACTGCCAGCAGTAGTCATGG+AGG - chr7_1:66403222-66403241 None:intergenic 55.0%
ACGACTGCCAGCAGTAGTCA+TGG - chr7_1:66403225-66403244 None:intergenic 55.0%
TGACTACTGCTGGCAGTCGT+TGG + chr7_1:66403225-66403244 Msa1031680:CDS 55.0%
GACTACTGCTGGCAGTCGTT+GGG + chr7_1:66403226-66403245 Msa1031680:CDS 55.0%
ACTACTGCTGGCAGTCGTTG+GGG + chr7_1:66403227-66403246 Msa1031680:CDS 55.0%
!! GTTGGGGCGTTGTTATGTCC+AGG + chr7_1:66403243-66403262 Msa1031680:CDS 55.0%
TCGGCAGTGACTGGGTTTAG+GGG - chr7_1:66404133-66404152 None:intergenic 55.0%
TGTGAGGGCTCGAGCTCAAT+GGG + chr7_1:66404283-66404302 Msa1031680:three_prime_UTR 55.0%
! CGGCTTGGAGATCTTCAGCC+TGG + chr7_1:66398947-66398966 Msa1031680:CDS 60.0%
GGAGGTGGAAGAGGAAGAGG+CGG + chr7_1:66399037-66399056 Msa1031680:CDS 60.0%
GGAAGAGGCGGTAATGCCAC+AGG + chr7_1:66399049-66399068 Msa1031680:CDS 60.0%
GTTCGTCTCGTGGGTACAGC+TGG - chr7_1:66399094-66399113 None:intergenic 60.0%
CCAGCTGCAGTTCGTCTCGT+GGG - chr7_1:66399103-66399122 None:intergenic 60.0%
ACCAGCTGCAGTTCGTCTCG+TGG - chr7_1:66399104-66399123 None:intergenic 60.0%
CACAACCCCTGTCCCTGAGA+GGG + chr7_1:66399303-66399322 Msa1031680:CDS 60.0%
!! GGCCCAGCCTTTGGGATGTA+TGG + chr7_1:66400267-66400286 Msa1031680:CDS 60.0%
GGCTGCTTGCATTGCAGTGG+AGG + chr7_1:66400428-66400447 Msa1031680:CDS 60.0%
CGCACCTGATAACCCTGCCA+CGG - chr7_1:66401092-66401111 None:intergenic 60.0%
CACGCCGTCCTATGAAGCAG+AGG + chr7_1:66401631-66401650 Msa1031680:CDS 60.0%
TGGGCCCTGATCATGGATGC+AGG + chr7_1:66402060-66402079 Msa1031680:CDS 60.0%
CCAACCTTGTGCAGGAAGGC+CGG - chr7_1:66402120-66402139 None:intergenic 60.0%
TACACTGCCGAAGTGGGCCA+AGG - chr7_1:66402794-66402813 None:intergenic 60.0%
GTGTGAGGGCTCGAGCTCAA+TGG + chr7_1:66404282-66404301 Msa1031680:three_prime_UTR 60.0%
CCCACGAGACGAACTGCAGC+TGG + chr7_1:66399100-66399119 Msa1031680:CDS 65.0%
ACTGCAGCTGGTAGAGGCCG+CGG + chr7_1:66399112-66399131 Msa1031680:CDS 65.0%
GCACAACCCCTGTCCCTGAG+AGG + chr7_1:66399302-66399321 Msa1031680:CDS 65.0%
GTCACCGGCCTTCCTGCACA+AGG + chr7_1:66402113-66402132 Msa1031680:CDS 65.0%
CCGGCCTTCCTGCACAAGGT+TGG + chr7_1:66402117-66402136 Msa1031680:intron 65.0%
ACTGCCGAAGTGGGCCAAGG+AGG - chr7_1:66402791-66402810 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 66397704 66404544 66397704 ID=Msa1031680;Name=Msa1031680
chr7_1 mRNA 66397704 66404544 66397704 ID=Msa1031680-mRNA-1;Parent=Msa1031680;Name=Msa1031680-mRNA-1;_AED=0.08;_eAED=0.08;_QI=537|1|1|1|0.88|0.83|18|448|708
chr7_1 exon 66397704 66398181 66397704 ID=Msa1031680-mRNA-1:exon:14922;Parent=Msa1031680-mRNA-1
chr7_1 exon 66398852 66399324 66398852 ID=Msa1031680-mRNA-1:exon:14923;Parent=Msa1031680-mRNA-1
chr7_1 exon 66399655 66399780 66399655 ID=Msa1031680-mRNA-1:exon:14924;Parent=Msa1031680-mRNA-1
chr7_1 exon 66399908 66399981 66399908 ID=Msa1031680-mRNA-1:exon:14925;Parent=Msa1031680-mRNA-1
chr7_1 exon 66400103 66400172 66400103 ID=Msa1031680-mRNA-1:exon:14926;Parent=Msa1031680-mRNA-1
chr7_1 exon 66400251 66400306 66400251 ID=Msa1031680-mRNA-1:exon:14927;Parent=Msa1031680-mRNA-1
chr7_1 exon 66400413 66400484 66400413 ID=Msa1031680-mRNA-1:exon:14928;Parent=Msa1031680-mRNA-1
chr7_1 exon 66400592 66400686 66400592 ID=Msa1031680-mRNA-1:exon:14929;Parent=Msa1031680-mRNA-1
chr7_1 exon 66400829 66400895 66400829 ID=Msa1031680-mRNA-1:exon:14930;Parent=Msa1031680-mRNA-1
chr7_1 exon 66400977 66401106 66400977 ID=Msa1031680-mRNA-1:exon:14931;Parent=Msa1031680-mRNA-1
chr7_1 exon 66401204 66401422 66401204 ID=Msa1031680-mRNA-1:exon:14932;Parent=Msa1031680-mRNA-1
chr7_1 exon 66401522 66401652 66401522 ID=Msa1031680-mRNA-1:exon:14933;Parent=Msa1031680-mRNA-1
chr7_1 exon 66401960 66402134 66401960 ID=Msa1031680-mRNA-1:exon:14934;Parent=Msa1031680-mRNA-1
chr7_1 exon 66402236 66402326 66402236 ID=Msa1031680-mRNA-1:exon:14935;Parent=Msa1031680-mRNA-1
chr7_1 exon 66403129 66403286 66403129 ID=Msa1031680-mRNA-1:exon:14936;Parent=Msa1031680-mRNA-1
chr7_1 exon 66403382 66403570 66403382 ID=Msa1031680-mRNA-1:exon:14937;Parent=Msa1031680-mRNA-1
chr7_1 exon 66403987 66404185 66403987 ID=Msa1031680-mRNA-1:exon:14938;Parent=Msa1031680-mRNA-1
chr7_1 exon 66404236 66404544 66404236 ID=Msa1031680-mRNA-1:exon:14939;Parent=Msa1031680-mRNA-1
chr7_1 five_prime_UTR 66397704 66398181 66397704 ID=Msa1031680-mRNA-1:five_prime_utr;Parent=Msa1031680-mRNA-1
chr7_1 five_prime_UTR 66398852 66398910 66398852 ID=Msa1031680-mRNA-1:five_prime_utr;Parent=Msa1031680-mRNA-1
chr7_1 CDS 66398911 66399324 66398911 ID=Msa1031680-mRNA-1:cds;Parent=Msa1031680-mRNA-1
chr7_1 CDS 66399655 66399780 66399655 ID=Msa1031680-mRNA-1:cds;Parent=Msa1031680-mRNA-1
chr7_1 CDS 66399908 66399981 66399908 ID=Msa1031680-mRNA-1:cds;Parent=Msa1031680-mRNA-1
chr7_1 CDS 66400103 66400172 66400103 ID=Msa1031680-mRNA-1:cds;Parent=Msa1031680-mRNA-1
chr7_1 CDS 66400251 66400306 66400251 ID=Msa1031680-mRNA-1:cds;Parent=Msa1031680-mRNA-1
chr7_1 CDS 66400413 66400484 66400413 ID=Msa1031680-mRNA-1:cds;Parent=Msa1031680-mRNA-1
chr7_1 CDS 66400592 66400686 66400592 ID=Msa1031680-mRNA-1:cds;Parent=Msa1031680-mRNA-1
chr7_1 CDS 66400829 66400895 66400829 ID=Msa1031680-mRNA-1:cds;Parent=Msa1031680-mRNA-1
chr7_1 CDS 66400977 66401106 66400977 ID=Msa1031680-mRNA-1:cds;Parent=Msa1031680-mRNA-1
chr7_1 CDS 66401204 66401422 66401204 ID=Msa1031680-mRNA-1:cds;Parent=Msa1031680-mRNA-1
chr7_1 CDS 66401522 66401652 66401522 ID=Msa1031680-mRNA-1:cds;Parent=Msa1031680-mRNA-1
chr7_1 CDS 66401960 66402134 66401960 ID=Msa1031680-mRNA-1:cds;Parent=Msa1031680-mRNA-1
chr7_1 CDS 66402236 66402326 66402236 ID=Msa1031680-mRNA-1:cds;Parent=Msa1031680-mRNA-1
chr7_1 CDS 66403129 66403286 66403129 ID=Msa1031680-mRNA-1:cds;Parent=Msa1031680-mRNA-1
chr7_1 CDS 66403382 66403570 66403382 ID=Msa1031680-mRNA-1:cds;Parent=Msa1031680-mRNA-1
chr7_1 CDS 66403987 66404046 66403987 ID=Msa1031680-mRNA-1:cds;Parent=Msa1031680-mRNA-1
chr7_1 three_prime_UTR 66404047 66404185 66404047 ID=Msa1031680-mRNA-1:three_prime_utr;Parent=Msa1031680-mRNA-1
chr7_1 three_prime_UTR 66404236 66404544 66404236 ID=Msa1031680-mRNA-1:three_prime_utr;Parent=Msa1031680-mRNA-1
Gene Sequence

>Msa1031680

ATGCCAGAGTTGAGAAGTGGAGCAAGAAGGTCAAAGCGGCTTGGAGATCTTCAGCCTGGTCCACAACCTGTTGATCAAGGAGAGAATTGGGCAGAGCCTGCGCAGAACAGAACTAGGAGGAGAGTTGGAGGTGGAAGAGGAAGAGGCGGTAATGCCACAGGTTTAGGTAAAGGGTCTTCACCAGCTGTACCCACGAGACGAACTGCAGCTGGTAGAGGCCGCGGAGCAAGATTGATTGATTTGGATCCTCAACCTTGTGACCTCCTTCCAGAACCTGTTGCATTAAGGGCGCAGGAACCTGTTTACAATAACGTAGAGGTAGTGGCCAATAATAACATTGCGATGGAGGGTGGAAGTGGTGATAAAGGGGTGGCAGCTGAAGAAGACGCAAGCACAACCCCTGTCCCTGAGAGGGTGCAAGTTGGCAACTCTCCTGTATACAAGACAGAAAGGAAGTTGGGTAAGGGCGGTTTCGGCCAAGTTTATGTTGGCAGAAGGGTTAGTGGTGGCTCTGATCGAGTAGGTCCTGATGCTATGGAGGTTGCACTCAAGTTTGAGCATAGAAACAGTAAAGGTTGTAATTATGGGCCTCCCTATGAGTGGCAAGTTTACAGCAATCTGAATGGCTGTTATGGCATTCCCGGGGTTCATTACAAGGGTCGACAAGGAGATTTCTACATTTTGGTTATGGACATACTTGGGCCCAGCCTTTGGGATGTATGGAATTCTCTTGGTCAATCGATGTCACCAAGTATGGCTGCTTGCATTGCAGTGGAGGCAATATCAATTCTTGAGAAGCTCCATTTGAAAGGGTTTGTGCACGGAGATGTAAAACCAGAAAACTTTTTGCTTGGTCAACCTGGAACGGCTGATGATAAGAAGTTATATCTTATTGATCTTGGTTTAGCTTCTAAATGGAAGGATGCATCATCTGGTCAACACGTTGAATATGATCAGAGACCTGATATATTCAGGGGAACGATAAGATATGCTAGTGTACATGCACATTTAGGTAGGACTGGCAGTCGAAGGGATGATCTTGAGTCACTGGCATACACATTGATATTTCTCATAAAAGGGAGATTGCCGTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTGTAAGAAAAAAATGTCCACTTCCGCGGAGTTGATGTGTTGCTTTTGTCCCGCCCCATTTAAGCTGTTCCTAGAAGCAGTTACTAACATGAGATTTGATGAGGAGCCAAATTATTCCAAGCTTATATCACTTTTTGACAGCTTGATCGAACCATGCACTCCATTGAGACCTATTAGAATTGATGGAGCTTTAAAGGTTGGTCAAAAACGAGGAAGGATGCTTATTAATCTGGAAGAAGATGAGCAGCCTAAGAAAAAAGTGCGATTGGGTAGTCCTGCTACTCAGTGGATATCAGTGTATAATGCACGCCGTCCTATGAAGCAGAGATATCACTATAATGTAGCTGACAATAGGCTCCGTCAGCATGTAGACAAGGGCATTGAGGATGGGTTGTATATAAGCTGTGTGGCCTCTTCAGCGAATTTGTGGGCCCTGATCATGGATGCAGGAACAGGTTTTTCTTCCCAAGTTTATGAGTTGTCACCGGCCTTCCTGCACAAGGATTGGATTATGGAGCAATGGGAGAAAAATTACTATATCAGTTCAATAGCTGGTGCAGTTAATGGCAGTTCCTTGGTTGTCATGTCCAAAGGAACTCCTTATACACAGCAGTCCTACAAAGTGAGCGAATCATTTCCTTTCAAATGGATAAACAAGAAGTGGAAAGAAGGGTTCCATGTCACCTCCATGACTACTGCTGGCAGTCGTTGGGGCGTTGTTATGTCCAGGAATGCTGGGTATTCTGATCAGGTTGTGGAGCTGGACTTTTTGTATCCAAGTGAAGGAATCCATCGAAGATGGGAAAATAATTACCGGATTACTTCTATGGCTGCTACTAATGATCAGGCAGCCTTCATACTCAGCATACCAAAACGCAAATTACTAGACGAGACTCAAGAGACTCTGCGGACATCTGCTTTCCCTAGCACCCATGTAAAGGAGAAATGGTCCAAGAATCTCTATATTGCCTCGATATGTTATGGGCGAACTGTTTGCTAG
Protein sequence

>Msa1031680

MPELRSGARRSKRLGDLQPGPQPVDQGENWAEPAQNRTRRRVGGGRGRGGNATGLGKGSSPAVPTRRTAAGRGRGARLIDLDPQPCDLLPEPVALRAQEPVYNNVEVVANNNIAMEGGSGDKGVAAEEDASTTPVPERVQVGNSPVYKTERKLGKGGFGQVYVGRRVSGGSDRVGPDAMEVALKFEHRNSKGCNYGPPYEWQVYSNLNGCYGIPGVHYKGRQGDFYILVMDILGPSLWDVWNSLGQSMSPSMAACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGTADDKKLYLIDLGLASKWKDASSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSAELMCCFCPAPFKLFLEAVTNMRFDEEPNYSKLISLFDSLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADNRLRQHVDKGIEDGLYISCVASSANLWALIMDAGTGFSSQVYELSPAFLHKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWENNYRITSMAATNDQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC*