AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1033580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1033580 MtrunA17_Chr7g0256351 94.723 379 20 0 1 379 1 379 0.0 747
Msa1033580 MtrunA17_Chr6g0488451 74.263 373 85 3 6 378 2 363 0.0 556
Msa1033580 MtrunA17_Chr6g0488431 62.727 110 36 1 6 115 4 108 1.94e-42 144
Msa1033580 MtrunA17_Chr6g0488421 44.715 123 42 1 125 247 22 118 3.53e-26 110
Msa1033580 MtrunA17_Chr6g0488421 65.909 44 15 0 270 313 331 374 1.30e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1033580 AT5G56780.1 42.010 388 186 9 1 378 11 369 5.15e-91 282
Msa1033580 AT5G56770.1 42.529 174 76 4 2 174 51 201 1.14e-35 131

Find 144 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACAACCTTCCTCAGAAAT+TGG 0.157069 7_1:-68773821 Msa1033580:CDS
TTATTCACTTGCGTCGTCTT+AGG 0.164654 7_1:+68774698 None:intergenic
CTACATCATGGCTGGCATTT+TGG 0.209063 7_1:+68772255 None:intergenic
AACGGGAAGGTCATTGTTTC+AGG 0.214002 7_1:-68773599 Msa1033580:CDS
TTCTCCTCCCTTTATGTTCC+TGG 0.242712 7_1:+68772105 None:intergenic
GGCAGCTTGCTTGATTTAAT+TGG 0.245613 7_1:+68772581 None:intergenic
CCGATGGTTCTATTTGTAAA+AGG 0.246592 7_1:-68772403 Msa1033580:CDS
AGCTGTGTCGCGTAGTAATC+TGG 0.263388 7_1:-68773773 Msa1033580:CDS
GCTTCCCAATTGTTTATAGA+TGG 0.289991 7_1:-68773561 Msa1033580:CDS
TTGGTATCCCCACTTTCCTC+TGG 0.290433 7_1:+68772600 None:intergenic
AAACCATCTAAATTCATATA+TGG 0.291135 7_1:+68771955 None:intergenic
GATTCCACACATAATGGTTT+TGG 0.295658 7_1:+68772184 None:intergenic
ATTCTCATTCCTTTGTGTTC+AGG 0.303340 7_1:+68772353 None:intergenic
CAAGATGATTCCACACATAA+TGG 0.329184 7_1:+68772178 None:intergenic
TGTAGAAGACAACCGGTTAA+AGG 0.332466 7_1:-68772140 Msa1033580:CDS
TCAAGTTAAGGAACTTTGTT+TGG 0.338399 7_1:-68774762 Msa1033580:five_prime_UTR
AAACCATATATGAATTTAGA+TGG 0.345737 7_1:-68771958 Msa1033580:three_prime_UTR
CTTGGGTGATCTGATTGCTT+TGG 0.351144 7_1:+68772316 None:intergenic
GGCATTTCACAACTTGCTTC+GGG 0.351871 7_1:-68774805 Msa1033580:five_prime_UTR
GCATTGTAGGTAATGCTTAT+AGG 0.363449 7_1:-68772280 Msa1033580:CDS
TTCTTATCGGTCCTTCTGAT+TGG 0.365524 7_1:-68773888 Msa1033580:CDS
GTCAAATAGTTGTAGCTAAT+AGG 0.383020 7_1:-68771796 Msa1033580:three_prime_UTR
TCAGAATTAGAAAGCATTGT+AGG 0.383504 7_1:-68772293 Msa1033580:CDS
AAGGTCTTAATTCCAGCATC+TGG 0.388956 7_1:-68771878 Msa1033580:three_prime_UTR
TGGCATTTCACAACTTGCTT+CGG 0.391389 7_1:-68774806 Msa1033580:five_prime_UTR
GGTGAAAGGTAGAAGCAATT+TGG 0.393179 7_1:+68772622 None:intergenic
AAAAGGTGCCAGGAACATAA+AGG 0.395561 7_1:-68772113 Msa1033580:CDS
GGAGCCCATCTATAAACAAT+TGG 0.397811 7_1:+68773556 None:intergenic
GAAGAATCTAATTCAAGTTA+AGG 0.403150 7_1:-68774774 Msa1033580:five_prime_UTR
AAACTTGAAGAAATTCTCAT+TGG 0.408901 7_1:-68774841 Msa1033580:five_prime_UTR
AACCGGTTAAAGGAAGAAAA+AGG 0.410668 7_1:-68772130 Msa1033580:CDS
TATTTGTATTAATTCCTTGA+AGG 0.412691 7_1:-68771719 Msa1033580:three_prime_UTR
CATGAGAATGCTAAAATTTG+CGG 0.413022 7_1:-68772437 Msa1033580:CDS
CGCATAGTTGTGGTTTACCT+TGG 0.418108 7_1:-68773715 Msa1033580:CDS
GCCTCTGACAGATGACAAAC+TGG 0.430967 7_1:-68772561 Msa1033580:CDS
CACAACCTTCCTCAGAAATT+GGG 0.434094 7_1:-68773820 Msa1033580:CDS
CCCGTGTGTTCAAATTAAAC+AGG 0.435752 7_1:-68772505 Msa1033580:CDS
TATTCACTTGCGTCGTCTTA+GGG 0.441443 7_1:+68774699 None:intergenic
TCTTATCGGTCCTTCTGATT+GGG 0.443716 7_1:-68773887 Msa1033580:CDS
GCAGCTGAGATTCTGTTCTC+AGG 0.444652 7_1:+68772759 None:intergenic
CAGATACAATACAACCTTCA+AGG 0.449780 7_1:+68771705 None:intergenic
GTCACGTCCTAGGATAGTTC+AGG 0.452457 7_1:-68772483 Msa1033580:CDS
GAAATAACAAACAGCTCTCT+AGG 0.454495 7_1:-68771824 Msa1033580:three_prime_UTR
TACTTGTTGAAGCAGGAGTT+AGG 0.457015 7_1:-68771668 Msa1033580:three_prime_UTR
AAGACGACGCAAGTGAATAA+TGG 0.458982 7_1:-68774695 Msa1033580:exon
GTGGAGGGTCTTCTACATCA+TGG 0.463412 7_1:+68772243 None:intergenic
CTTCCCAATTGTTTATAGAT+GGG 0.464946 7_1:-68773560 Msa1033580:CDS
GGGTGATCTGATTGCTTTGG+CGG 0.466767 7_1:+68772319 None:intergenic
AGAGCAAGACTCCAGCGTTA+TGG 0.467691 7_1:-68773676 Msa1033580:CDS
CCTTCCTCAGAAATTGGGTC+CGG 0.470635 7_1:-68773815 Msa1033580:CDS
AAGTCAGAGGGTGCAATTGA+AGG 0.474909 7_1:+68775257 None:intergenic
TGACTCTTAACCATTCTTTG+TGG 0.474955 7_1:+68772224 None:intergenic
GGAAGACTATTCCAAAGAAA+AGG 0.474965 7_1:-68773866 Msa1033580:CDS
AAGGTTGTGAATCCTGTATC+TGG 0.479106 7_1:+68773834 None:intergenic
AGCATTTGAAGAATATCATC+AGG 0.480750 7_1:+68772686 None:intergenic
AACAATGTGCGAAGACGTAA+AGG 0.484874 7_1:-68771918 Msa1033580:three_prime_UTR
AGGAAGGATCTACCAGATAC+AGG 0.491164 7_1:-68773846 Msa1033580:CDS
AATTAAACAGGTCACGTCCT+AGG 0.491462 7_1:-68772493 Msa1033580:CDS
CATTATGTGTGGAATCATCT+TGG 0.495040 7_1:-68772177 Msa1033580:CDS
ATGCTCAACAAATTAGCTTC+AGG 0.496009 7_1:-68772668 Msa1033580:CDS
CTCCAGCGTTATGGCAGGAA+TGG 0.496259 7_1:-68773667 Msa1033580:CDS
TGGCAAGCTTGTAAATTTCA+CGG 0.499268 7_1:+68773749 None:intergenic
CTTCCTCAGAAATTGGGTCC+GGG 0.499654 7_1:-68773814 Msa1033580:CDS
CCCACTTTCCTCTGGGTGAA+AGG 0.500019 7_1:+68772608 None:intergenic
AATGCTTTCTAATTCTGACT+TGG 0.501548 7_1:+68772298 None:intergenic
TGGTATCCCCACTTTCCTCT+GGG 0.502512 7_1:+68772601 None:intergenic
ATGCTTTCTAATTCTGACTT+GGG 0.502963 7_1:+68772299 None:intergenic
TCTTAACCATTCTTTGTGGA+GGG 0.504208 7_1:+68772228 None:intergenic
TGTGATAACCGTTGTTCACT+AGG 0.504562 7_1:+68774732 None:intergenic
CTCTTAACCATTCTTTGTGG+AGG 0.504735 7_1:+68772227 None:intergenic
ATCCACTTGTAGAAGACAAC+CGG 0.506149 7_1:-68772147 Msa1033580:CDS
AGAAGACCCTCCACAAAGAA+TGG 0.506283 7_1:-68772234 Msa1033580:CDS
GAGCCCATCTATAAACAATT+GGG 0.508603 7_1:+68773557 None:intergenic
GGGTAGAAGAAGGCGGTTGA+AGG 0.508905 7_1:-68771897 Msa1033580:three_prime_UTR
ACTTGCATATATCCAGATGC+TGG 0.516224 7_1:+68771866 None:intergenic
TTCTATTTGTAAAAGGCCAC+CGG 0.517076 7_1:-68772396 Msa1033580:CDS
TGTTGAAGCAGGAGTTAGGT+TGG 0.521433 7_1:-68771664 Msa1033580:three_prime_UTR
ACCTGTTTAATTTGAACACA+CGG 0.522258 7_1:+68772504 None:intergenic
GTGGTATCCTGAACTATCCT+AGG 0.522643 7_1:+68772476 None:intergenic
GATGACTCTTCTCTACGAAC+GGG 0.523910 7_1:-68773616 Msa1033580:CDS
AGGGTCTTCTACATCATGGC+TGG 0.525907 7_1:+68772247 None:intergenic
CTCATTGGAATACAATATGA+TGG 0.528612 7_1:-68774826 Msa1033580:five_prime_UTR
AACCGGTTGTCTTCTACAAG+TGG 0.530917 7_1:+68772145 None:intergenic
TTAGTACATTTGATTATGCA+TGG 0.537544 7_1:-68772736 Msa1033580:CDS
AAAGGTGCCAGGAACATAAA+GGG 0.538956 7_1:-68772112 Msa1033580:CDS
ACCTTTCACCCAGAGGAAAG+TGG 0.539145 7_1:-68772609 Msa1033580:CDS
CAGCTGAGATTCTGTTCTCA+GGG 0.541120 7_1:+68772760 None:intergenic
CCTTTCACCCAGAGGAAAGT+GGG 0.542001 7_1:-68772608 Msa1033580:CDS
ATGATTCTAGCTTCTCCCAC+TGG 0.543441 7_1:-68774630 Msa1033580:CDS
ACTCCAAGCTCGTACACCCC+CGG 0.547377 7_1:+68773796 None:intergenic
TTAATTTGAACACACGGGAT+AGG 0.547956 7_1:+68772510 None:intergenic
TGTGGAATCATCTTGGATGA+TGG 0.551166 7_1:-68772170 Msa1033580:CDS
CAAGACTCCAGCGTTATGGC+AGG 0.554748 7_1:-68773672 Msa1033580:CDS
CTCCATTCCTGCCATAACGC+TGG 0.555122 7_1:+68773665 None:intergenic
GCTGTGTCGCGTAGTAATCT+GGG 0.557788 7_1:-68773772 Msa1033580:CDS
TTCCTCAGAAATTGGGTCCG+GGG 0.559029 7_1:-68773813 Msa1033580:CDS
TAAAATTTGCGGAGTGATGT+TGG 0.559942 7_1:-68772426 Msa1033580:CDS
ACAAGAATACTTGTTGAAGC+AGG 0.561254 7_1:-68771675 Msa1033580:three_prime_UTR
GTTAAGAGTCATGTTGATGA+GGG 0.562383 7_1:-68772212 Msa1033580:CDS
TTCTAGCTTCTCCCACTGGA+AGG 0.570084 7_1:-68774626 Msa1033580:intron
GAATAGTCTTCCCAATCAGA+AGG 0.574116 7_1:+68773877 None:intergenic
TGACCCTCATCGCATAGTTG+TGG 0.574795 7_1:-68773725 Msa1033580:CDS
GGTTAAGAGTCATGTTGATG+AGG 0.575589 7_1:-68772213 Msa1033580:CDS
CCGGACCCAATTTCTGAGGA+AGG 0.577737 7_1:+68773815 None:intergenic
GGTCGTCAACAGATTGAAGC+GGG 0.577925 7_1:-68774674 Msa1033580:CDS
AGATGACTCTTCTCTACGAA+CGG 0.578063 7_1:-68773617 Msa1033580:CDS
TCCTCAGAAATTGGGTCCGG+GGG 0.579255 7_1:-68773812 Msa1033580:CDS
GCAAGTATAAATTGACATTG+TGG 0.581260 7_1:-68771849 Msa1033580:three_prime_UTR
TGCGGAGTGATGTTGGCCGA+TGG 0.582561 7_1:-68772419 Msa1033580:CDS
CCTGTTTAATTTGAACACAC+GGG 0.590009 7_1:+68772505 None:intergenic
AACTATGCGATGAGGGTCAG+TGG 0.590571 7_1:+68773729 None:intergenic
AGGATAGTTCAGGATACCAC+TGG 0.597133 7_1:-68772473 Msa1033580:CDS
TGATCTGATTGCTTTGGCGG+CGG 0.601310 7_1:+68772322 None:intergenic
TCCAGTTTGTCATCTGTCAG+AGG 0.601705 7_1:+68772560 None:intergenic
CTTCTGAATCTGATGTATAG+CGG 0.603816 7_1:+68775228 None:intergenic
AAGACGTAAAGGGTAGAAGA+AGG 0.610367 7_1:-68771907 Msa1033580:three_prime_UTR
TGCTTCTACCTTTCACCCAG+AGG 0.610412 7_1:-68772616 Msa1033580:CDS
GACTATTCCAAAGAAAAGGA+AGG 0.610651 7_1:-68773862 Msa1033580:CDS
ATCGCCAAAACCATTATGTG+TGG 0.621653 7_1:-68772188 Msa1033580:CDS
AAACCACAACTATGCGATGA+GGG 0.622038 7_1:+68773722 None:intergenic
ACAATGTGCGAAGACGTAAA+GGG 0.627108 7_1:-68771917 Msa1033580:three_prime_UTR
GTAGCACAAGAATTCATACA+TGG 0.628503 7_1:+68775288 None:intergenic
ACACAATCAGCAATGGTACA+CGG 0.633965 7_1:-68772712 Msa1033580:CDS
GCATGGAACACAATCAGCAA+TGG 0.645734 7_1:-68772719 Msa1033580:CDS
TGGTCGTCAACAGATTGAAG+CGG 0.649124 7_1:-68774675 Msa1033580:CDS
TATTGAACAGATGCAAAACG+AGG 0.650690 7_1:-68772789 Msa1033580:intron
AATTGATATGAACCTTCCAG+TGG 0.655241 7_1:+68774614 None:intergenic
TAGCACAAGAATTCATACAT+GGG 0.658198 7_1:+68775289 None:intergenic
GCACTTCTCCTAGTGAACAA+CGG 0.659176 7_1:-68774740 Msa1033580:five_prime_UTR
ATTGATATGAACCTTCCAGT+GGG 0.662855 7_1:+68774615 None:intergenic
ATGAGTGGCACTACCACCAG+TGG 0.671537 7_1:+68772457 None:intergenic
AGCACAAGAATTCATACATG+GGG 0.673117 7_1:+68775290 None:intergenic
ACTCTTCTCTACGAACGGGA+AGG 0.673197 7_1:-68773612 Msa1033580:CDS
TAGCGGTTTGAGAAGTCAGA+GGG 0.674992 7_1:+68775245 None:intergenic
TAAACCACAACTATGCGATG+AGG 0.681351 7_1:+68773721 None:intergenic
CTTTCACCCAGAGGAAAGTG+GGG 0.681368 7_1:-68772607 Msa1033580:CDS
ATTGAACAGATGCAAAACGA+GGG 0.682609 7_1:-68772788 Msa1033580:intron
ATAGCGGTTTGAGAAGTCAG+AGG 0.684846 7_1:+68775244 None:intergenic
ATAGTTCAGGATACCACTGG+TGG 0.705856 7_1:-68772470 Msa1033580:CDS
ACGTAAAGGGTAGAAGAAGG+CGG 0.717504 7_1:-68771904 Msa1033580:three_prime_UTR
GTGAGGTGTCCTGAACACAA+AGG 0.719035 7_1:-68772362 Msa1033580:CDS
GGTGCCAGGAACATAAAGGG+AGG 0.732457 7_1:-68772109 Msa1033580:CDS
AAACTGGATGAAGCTGACAG+TGG 0.772229 7_1:-68772545 Msa1033580:CDS
CAATCAGCAATGGTACACGG+AGG 0.803408 7_1:-68772709 Msa1033580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTTTTATTTGGTTAT+TGG - chr7_1:68772683-68772702 Msa1033580:CDS 10.0%
!! AATTTATATATATATGTTGC+TGG + chr7_1:68772045-68772064 None:intergenic 15.0%
!!! TATATAAAAGTGCAATTTTT+TGG - chr7_1:68774120-68774139 Msa1033580:intron 15.0%
!! TCGAAAAAATAATTGAATTT+AGG - chr7_1:68774892-68774911 Msa1033580:intron 15.0%
!!! ATTCTCCTATTTTCAAATTT+TGG - chr7_1:68771771-68771790 Msa1033580:three_prime_UTR 20.0%
!! GAATTCCAAAATTTGAAAAT+AGG + chr7_1:68771779-68771798 None:intergenic 20.0%
!!! TTCCATTTAGATAATTTTCT+GGG - chr7_1:68772542-68772561 Msa1033580:CDS 20.0%
!!! AAATTGAAAGCTTTAAAAAG+TGG + chr7_1:68772571-68772590 None:intergenic 20.0%
!!! GAACAGGATATTTTTTTATT+TGG - chr7_1:68772676-68772695 Msa1033580:CDS 20.0%
!! TTGTTAACTTCACTATAATA+TGG + chr7_1:68772926-68772945 None:intergenic 20.0%
!! AAACCATATATGAATTTAGA+TGG - chr7_1:68775005-68775024 Msa1033580:intron 20.0%
!! AAACCATCTAAATTCATATA+TGG + chr7_1:68775011-68775030 None:intergenic 20.0%
!! TATTTGTATTAATTCCTTGA+AGG - chr7_1:68775244-68775263 Msa1033580:five_prime_UTR 20.0%
! ACGTAATTCTAAATTGTGTA+TGG + chr7_1:68771871-68771890 None:intergenic 25.0%
! GATATACAATACAATTCAAC+TGG - chr7_1:68771957-68771976 Msa1033580:three_prime_UTR 25.0%
! AAACTTGAAGAAATTCTCAT+TGG - chr7_1:68772122-68772141 Msa1033580:CDS 25.0%
!! GAAGAATCTAATTCAAGTTA+AGG - chr7_1:68772189-68772208 Msa1033580:CDS 25.0%
!! CACTAAAAGAATGAAGTATT+AGG + chr7_1:68772499-68772518 None:intergenic 25.0%
! CAGAAAATTATCTAAATGGA+AGG + chr7_1:68772543-68772562 None:intergenic 25.0%
!! CTTCCATTTAGATAATTTTC+TGG - chr7_1:68772541-68772560 Msa1033580:CDS 25.0%
!! AAAAGCTATTGATTGTATGA+TGG - chr7_1:68772603-68772622 Msa1033580:CDS 25.0%
!! TAGTTTTCGTCATTCTATTA+TGG + chr7_1:68772982-68773001 None:intergenic 25.0%
!! AACTGTTTTCAGATTCTTAT+CGG - chr7_1:68773062-68773081 Msa1033580:intron 25.0%
! AATATCAGATATGTACTTAC+AGG + chr7_1:68773431-68773450 None:intergenic 25.0%
! GTTTCAAAAAAGTCATTGAT+TGG - chr7_1:68773554-68773573 Msa1033580:intron 25.0%
! ACGTTATCATATGATAGTAT+AGG - chr7_1:68773583-68773602 Msa1033580:CDS 25.0%
! CGTTATCATATGATAGTATA+GGG - chr7_1:68773584-68773603 Msa1033580:CDS 25.0%
! AATTAGCAGTTCTCATTTAA+AGG - chr7_1:68773665-68773684 Msa1033580:CDS 25.0%
! ACCTAAATTACATAGATTTC+AGG + chr7_1:68773691-68773710 None:intergenic 25.0%
!! TAACCCAATTCCATTTTAAA+TGG - chr7_1:68773831-68773850 Msa1033580:CDS 25.0%
!! AACCCAATTCCATTTTAAAT+GGG - chr7_1:68773832-68773851 Msa1033580:CDS 25.0%
!!! AATTTTGATTGTGTCACTTT+TGG + chr7_1:68773924-68773943 None:intergenic 25.0%
! AAGTGACACAATCAAAATTT+AGG - chr7_1:68773925-68773944 Msa1033580:intron 25.0%
! GAATTATCATAATAGACTAG+TGG + chr7_1:68773988-68774007 None:intergenic 25.0%
! CAAAATCTACTGTTAATATG+TGG - chr7_1:68774044-68774063 Msa1033580:intron 25.0%
!!! GCAATTTTTTGGAACTATAA+TGG - chr7_1:68774131-68774150 Msa1033580:intron 25.0%
! TTAGTACATTTGATTATGCA+TGG - chr7_1:68774227-68774246 Msa1033580:intron 25.0%
!! GCTATAATAAGTACATTTTG+TGG + chr7_1:68774962-68774981 None:intergenic 25.0%
! AGGTAGTAAGATAAAAATGT+TGG - chr7_1:68775187-68775206 Msa1033580:intron 25.0%
TAGCACAAGAATTCATACAT+GGG + chr7_1:68771677-68771696 None:intergenic 30.0%
! CAATTTAGAATTACGTGTTG+TGG - chr7_1:68771875-68771894 Msa1033580:three_prime_UTR 30.0%
AATACAATTCAACTGGATCT+GGG - chr7_1:68771964-68771983 Msa1033580:three_prime_UTR 30.0%
AAATGAAAATGCATCTCACA+TGG - chr7_1:68772005-68772024 Msa1033580:three_prime_UTR 30.0%
TGCAATCTGTGAAAAGAAAT+CGG + chr7_1:68772078-68772097 None:intergenic 30.0%
CTCATTGGAATACAATATGA+TGG - chr7_1:68772137-68772156 Msa1033580:CDS 30.0%
TCAAGTTAAGGAACTTTGTT+TGG - chr7_1:68772201-68772220 Msa1033580:CDS 30.0%
!! AGCTAGAATCATGTTTTGTT+CGG + chr7_1:68772325-68772344 None:intergenic 30.0%
! TTAATGTTTCTACGATTCTG+TGG - chr7_1:68772421-68772440 Msa1033580:CDS 30.0%
! GAAGTATTAGGCTTTACTTT+AGG + chr7_1:68772487-68772506 None:intergenic 30.0%
AGCCCAGAAAATTATCTAAA+TGG + chr7_1:68772547-68772566 None:intergenic 30.0%
GACTAAAAAATCTCAAGAAC+AGG - chr7_1:68772660-68772679 Msa1033580:CDS 30.0%
CTCAAATAAACACACATACA+CGG - chr7_1:68772724-68772743 Msa1033580:CDS 30.0%
TCAAATAAACACACATACAC+GGG - chr7_1:68772725-68772744 Msa1033580:CDS 30.0%
TTCTTTCAACTGTACAAATC+TGG - chr7_1:68773003-68773022 Msa1033580:intron 30.0%
! TTTCAGGAGATATTTTCACA+AGG - chr7_1:68773380-68773399 Msa1033580:intron 30.0%
CTTCCCAATTGTTTATAGAT+GGG - chr7_1:68773403-68773422 Msa1033580:intron 30.0%
TGCAACTGAACATGTATTAA+TGG - chr7_1:68773484-68773503 Msa1033580:intron 30.0%
GCAACTGAACATGTATTAAT+GGG - chr7_1:68773485-68773504 Msa1033580:intron 30.0%
!! TGAACATGTATTAATGGGTT+CGG - chr7_1:68773490-68773509 Msa1033580:intron 30.0%
TAGTATAGGGTATAACTCAA+AGG - chr7_1:68773597-68773616 Msa1033580:CDS 30.0%
AATTCATAGCTTAAGAATGG+AGG + chr7_1:68773649-68773668 None:intergenic 30.0%
GCTAATTCATAGCTTAAGAA+TGG + chr7_1:68773652-68773671 None:intergenic 30.0%
GCCTGAAATCTATGTAATTT+AGG - chr7_1:68773687-68773706 Msa1033580:CDS 30.0%
! GACCCATTTAAAATGGAATT+GGG + chr7_1:68773837-68773856 None:intergenic 30.0%
AAAACTGGACCCATTTAAAA+TGG + chr7_1:68773844-68773863 None:intergenic 30.0%
!! TTCAGTTCTAGAGATATGTT+AGG - chr7_1:68773896-68773915 Msa1033580:intron 30.0%
! CACAATCAAAATTTAGGACA+AGG - chr7_1:68773931-68773950 Msa1033580:intron 30.0%
! TCAAAATTTAGGACAAGGTT+AGG - chr7_1:68773936-68773955 Msa1033580:intron 30.0%
! CAAAATTTAGGACAAGGTTA+GGG - chr7_1:68773937-68773956 Msa1033580:intron 30.0%
AGCATTTGAAGAATATCATC+AGG + chr7_1:68774280-68774299 None:intergenic 30.0%
!! ACCTGTTTAATTTGAACACA+CGG + chr7_1:68774462-68774481 None:intergenic 30.0%
!! AATTTTAGCATTCTCATGAG+TGG + chr7_1:68774524-68774543 None:intergenic 30.0%
CATGAGAATGCTAAAATTTG+CGG - chr7_1:68774526-68774545 Msa1033580:intron 30.0%
! CCTTTTACAAATAGAACCAT+CGG + chr7_1:68774563-68774582 None:intergenic 30.0%
ATGCTTTCTAATTCTGACTT+GGG + chr7_1:68774667-68774686 None:intergenic 30.0%
AATGCTTTCTAATTCTGACT+TGG + chr7_1:68774668-68774687 None:intergenic 30.0%
!! TCAGAATTAGAAAGCATTGT+AGG - chr7_1:68774670-68774689 Msa1033580:CDS 30.0%
!! TAGATGGTTTTTGTTGTACA+AGG - chr7_1:68775021-68775040 Msa1033580:intron 30.0%
GCAAGTATAAATTGACATTG+TGG - chr7_1:68775114-68775133 Msa1033580:intron 30.0%
GTCAAATAGTTGTAGCTAAT+AGG - chr7_1:68775167-68775186 Msa1033580:intron 30.0%
AGCACAAGAATTCATACATG+GGG + chr7_1:68771676-68771695 None:intergenic 35.0%
GTAGCACAAGAATTCATACA+TGG + chr7_1:68771678-68771697 None:intergenic 35.0%
CTTCTGAATCTGATGTATAG+CGG + chr7_1:68771738-68771757 None:intergenic 35.0%
GTATGGCTGAACAACAATAA+CGG + chr7_1:68771854-68771873 None:intergenic 35.0%
GGAATAGTGTTATAGCATAG+CGG - chr7_1:68771896-68771915 Msa1033580:three_prime_UTR 35.0%
CAATACAATTCAACTGGATC+TGG - chr7_1:68771963-68771982 Msa1033580:three_prime_UTR 35.0%
ATCTGTGAAAAGAAATCGGA+TGG + chr7_1:68772074-68772093 None:intergenic 35.0%
ATTGATATGAACCTTCCAGT+GGG + chr7_1:68772351-68772370 None:intergenic 35.0%
AATTGATATGAACCTTCCAG+TGG + chr7_1:68772352-68772371 None:intergenic 35.0%
GTGTTTATTTGAGCATGTGT+TGG + chr7_1:68772717-68772736 None:intergenic 35.0%
CAAATAAACACACATACACG+GGG - chr7_1:68772726-68772745 Msa1033580:CDS 35.0%
GGAAGACTATTCCAAAGAAA+AGG - chr7_1:68773097-68773116 Msa1033580:intron 35.0%
GACTATTCCAAAGAAAAGGA+AGG - chr7_1:68773101-68773120 Msa1033580:intron 35.0%
TGGCAAGCTTGTAAATTTCA+CGG + chr7_1:68773217-68773236 None:intergenic 35.0%
GCTTCCCAATTGTTTATAGA+TGG - chr7_1:68773402-68773421 Msa1033580:intron 35.0%
GAGCCCATCTATAAACAATT+GGG + chr7_1:68773409-68773428 None:intergenic 35.0%
! ACTATTAGCTTCAGCATCTT+AGG - chr7_1:68773528-68773547 Msa1033580:intron 35.0%
! AGGGTATAACTCAAAGGTTT+TGG - chr7_1:68773603-68773622 Msa1033580:CDS 35.0%
! GGACCCATTTAAAATGGAAT+TGG + chr7_1:68773838-68773857 None:intergenic 35.0%
TCTATACCTAATGTCTCTGA+TGG - chr7_1:68774017-68774036 Msa1033580:intron 35.0%
TGAATTCCATCAGAGACATT+AGG + chr7_1:68774026-68774045 None:intergenic 35.0%
! GTGTCGCATTTTACGAAATT+TGG - chr7_1:68774066-68774085 Msa1033580:intron 35.0%
TATTGAACAGATGCAAAACG+AGG - chr7_1:68774174-68774193 Msa1033580:intron 35.0%
ATTGAACAGATGCAAAACGA+GGG - chr7_1:68774175-68774194 Msa1033580:intron 35.0%
! ATGCTCAACAAATTAGCTTC+AGG - chr7_1:68774295-68774314 Msa1033580:intron 35.0%
! CACTAGAACATTTTCAGATG+TGG - chr7_1:68774318-68774337 Msa1033580:intron 35.0%
! TTAATTTGAACACACGGGAT+AGG + chr7_1:68774456-68774475 None:intergenic 35.0%
!! CCTGTTTAATTTGAACACAC+GGG + chr7_1:68774461-68774480 None:intergenic 35.0%
TAAAATTTGCGGAGTGATGT+TGG - chr7_1:68774537-68774556 Msa1033580:intron 35.0%
! CCGATGGTTCTATTTGTAAA+AGG - chr7_1:68774560-68774579 Msa1033580:intron 35.0%
TTCTATTTGTAAAAGGCCAC+CGG - chr7_1:68774567-68774586 Msa1033580:intron 35.0%
ATTCTCATTCCTTTGTGTTC+AGG + chr7_1:68774613-68774632 None:intergenic 35.0%
GCATTGTAGGTAATGCTTAT+AGG - chr7_1:68774683-68774702 Msa1033580:exon 35.0%
TCTTAACCATTCTTTGTGGA+GGG + chr7_1:68774738-68774757 None:intergenic 35.0%
TGACTCTTAACCATTCTTTG+TGG + chr7_1:68774742-68774761 None:intergenic 35.0%
! GTTAAGAGTCATGTTGATGA+GGG - chr7_1:68774751-68774770 Msa1033580:five_prime_UTR 35.0%
! GATTCCACACATAATGGTTT+TGG + chr7_1:68774782-68774801 None:intergenic 35.0%
CAAGATGATTCCACACATAA+TGG + chr7_1:68774788-68774807 None:intergenic 35.0%
CATTATGTGTGGAATCATCT+TGG - chr7_1:68774786-68774805 Msa1033580:five_prime_UTR 35.0%
AACCGGTTAAAGGAAGAAAA+AGG - chr7_1:68774833-68774852 Msa1033580:five_prime_UTR 35.0%
! CACCTTTTTCTTCCTTTAAC+CGG + chr7_1:68774838-68774857 None:intergenic 35.0%
GAAATAACAAACAGCTCTCT+AGG - chr7_1:68775139-68775158 Msa1033580:intron 35.0%
CAGATACAATACAACCTTCA+AGG + chr7_1:68775261-68775280 None:intergenic 35.0%
! ACAAGAATACTTGTTGAAGC+AGG - chr7_1:68775288-68775307 Msa1033580:five_prime_UTR 35.0%
AAATGCATCTCACATGGTCA+AGG - chr7_1:68772011-68772030 Msa1033580:three_prime_UTR 40.0%
! TGGCATTTCACAACTTGCTT+CGG - chr7_1:68772157-68772176 Msa1033580:CDS 40.0%
TGTGATAACCGTTGTTCACT+AGG + chr7_1:68772234-68772253 None:intergenic 40.0%
TATTCACTTGCGTCGTCTTA+GGG + chr7_1:68772267-68772286 None:intergenic 40.0%
TTATTCACTTGCGTCGTCTT+AGG + chr7_1:68772268-68772287 None:intergenic 40.0%
AAGACGACGCAAGTGAATAA+TGG - chr7_1:68772268-68772287 Msa1033580:CDS 40.0%
TTATTTGGTTATTGGCCCAG+TGG - chr7_1:68772691-68772710 Msa1033580:CDS 40.0%
GCTATTAGAGTCTAGTGGTT+TGG + chr7_1:68772811-68772830 None:intergenic 40.0%
ACCACTAGACTCTAATAGCA+AGG - chr7_1:68772812-68772831 Msa1033580:intron 40.0%
!! TCCTTGCTATTAGAGTCTAG+TGG + chr7_1:68772816-68772835 None:intergenic 40.0%
ATCTGGTTACCTTCTTACCT+TGG - chr7_1:68773020-68773039 Msa1033580:intron 40.0%
GTTACCTTCTTACCTTGGTT+TGG - chr7_1:68773025-68773044 Msa1033580:intron 40.0%
TTCTTATCGGTCCTTCTGAT+TGG - chr7_1:68773075-68773094 Msa1033580:intron 40.0%
TCTTATCGGTCCTTCTGATT+GGG - chr7_1:68773076-68773095 Msa1033580:intron 40.0%
GAATAGTCTTCCCAATCAGA+AGG + chr7_1:68773089-68773108 None:intergenic 40.0%
! GGTAGATCCTTCCTTTTCTT+TGG + chr7_1:68773111-68773130 None:intergenic 40.0%
AAGGTTGTGAATCCTGTATC+TGG + chr7_1:68773132-68773151 None:intergenic 40.0%
TCACAACCTTCCTCAGAAAT+TGG - chr7_1:68773142-68773161 Msa1033580:intron 40.0%
CACAACCTTCCTCAGAAATT+GGG - chr7_1:68773143-68773162 Msa1033580:intron 40.0%
AAACCACAACTATGCGATGA+GGG + chr7_1:68773244-68773263 None:intergenic 40.0%
TAAACCACAACTATGCGATG+AGG + chr7_1:68773245-68773264 None:intergenic 40.0%
! TCACATTGTCAGCTTTTCCA+AGG + chr7_1:68773268-68773287 None:intergenic 40.0%
AGATGACTCTTCTCTACGAA+CGG - chr7_1:68773346-68773365 Msa1033580:intron 40.0%
GGAGCCCATCTATAAACAAT+TGG + chr7_1:68773410-68773429 None:intergenic 40.0%
! AAATGGGTCCAGTTTTGCTT+TGG - chr7_1:68773848-68773867 Msa1033580:CDS 40.0%
ACACAATCAGCAATGGTACA+CGG - chr7_1:68774251-68774270 Msa1033580:intron 40.0%
GGTGAAAGGTAGAAGCAATT+TGG + chr7_1:68774344-68774363 None:intergenic 40.0%
! GGCAGCTTGCTTGATTTAAT+TGG + chr7_1:68774385-68774404 None:intergenic 40.0%
CCCGTGTGTTCAAATTAAAC+AGG - chr7_1:68774458-68774477 Msa1033580:intron 40.0%
AATTAAACAGGTCACGTCCT+AGG - chr7_1:68774470-68774489 Msa1033580:intron 40.0%
!!! CACCTCACTCTTTTTTCAAC+CGG + chr7_1:68774589-68774608 None:intergenic 40.0%
CTCTTAACCATTCTTTGTGG+AGG + chr7_1:68774739-68774758 None:intergenic 40.0%
GGTTAAGAGTCATGTTGATG+AGG - chr7_1:68774750-68774769 Msa1033580:five_prime_UTR 40.0%
ATCGCCAAAACCATTATGTG+TGG - chr7_1:68774775-68774794 Msa1033580:five_prime_UTR 40.0%
TGTGGAATCATCTTGGATGA+TGG - chr7_1:68774793-68774812 Msa1033580:five_prime_UTR 40.0%
ATCCACTTGTAGAAGACAAC+CGG - chr7_1:68774816-68774835 Msa1033580:five_prime_UTR 40.0%
TGTAGAAGACAACCGGTTAA+AGG - chr7_1:68774823-68774842 Msa1033580:five_prime_UTR 40.0%
!! TAAAGGAAGAAAAAGGTGCC+AGG - chr7_1:68774840-68774859 Msa1033580:five_prime_UTR 40.0%
!! AAAAGGTGCCAGGAACATAA+AGG - chr7_1:68774850-68774869 Msa1033580:five_prime_UTR 40.0%
!! AAAGGTGCCAGGAACATAAA+GGG - chr7_1:68774851-68774870 Msa1033580:five_prime_UTR 40.0%
AACAATGTGCGAAGACGTAA+AGG - chr7_1:68775045-68775064 Msa1033580:intron 40.0%
ACAATGTGCGAAGACGTAAA+GGG - chr7_1:68775046-68775065 Msa1033580:intron 40.0%
AAGACGTAAAGGGTAGAAGA+AGG - chr7_1:68775056-68775075 Msa1033580:intron 40.0%
AAGGTCTTAATTCCAGCATC+TGG - chr7_1:68775085-68775104 Msa1033580:intron 40.0%
ACTTGCATATATCCAGATGC+TGG + chr7_1:68775100-68775119 None:intergenic 40.0%
! TACTTGTTGAAGCAGGAGTT+AGG - chr7_1:68775295-68775314 Msa1033580:five_prime_UTR 40.0%
! AAGTCAGAGGGTGCAATTGA+AGG + chr7_1:68771709-68771728 None:intergenic 45.0%
TAGCGGTTTGAGAAGTCAGA+GGG + chr7_1:68771721-68771740 None:intergenic 45.0%
ATAGCGGTTTGAGAAGTCAG+AGG + chr7_1:68771722-68771741 None:intergenic 45.0%
! GGCATTTCACAACTTGCTTC+GGG - chr7_1:68772158-68772177 Msa1033580:CDS 45.0%
GCACTTCTCCTAGTGAACAA+CGG - chr7_1:68772223-68772242 Msa1033580:CDS 45.0%
TGGTCGTCAACAGATTGAAG+CGG - chr7_1:68772288-68772307 Msa1033580:CDS 45.0%
!! ATGATTCTAGCTTCTCCCAC+TGG - chr7_1:68772333-68772352 Msa1033580:CDS 45.0%
GGCTTTACTTTAGGCATCAC+TGG + chr7_1:68772478-68772497 None:intergenic 45.0%
! TGATGGCGTAGTGCTTAAAG+AGG - chr7_1:68772620-68772639 Msa1033580:CDS 45.0%
ATAAACACACATACACGGGG+AGG - chr7_1:68772729-68772748 Msa1033580:CDS 45.0%
TAAACACACATACACGGGGA+GGG - chr7_1:68772730-68772749 Msa1033580:CDS 45.0%
! GACATTTTACGTGGAATCCC+AGG + chr7_1:68772781-68772800 None:intergenic 45.0%
!!! GGCTTTGAGGACATTTTACG+TGG + chr7_1:68772790-68772809 None:intergenic 45.0%
!! AGTCTAGTGGTTTGGCTTTG+AGG + chr7_1:68772803-68772822 None:intergenic 45.0%
GCAACCAAACCAAGGTAAGA+AGG + chr7_1:68773032-68773051 None:intergenic 45.0%
TAACACGAGCAACCAAACCA+AGG + chr7_1:68773040-68773059 None:intergenic 45.0%
AGGAAGGATCTACCAGATAC+AGG - chr7_1:68773117-68773136 Msa1033580:intron 45.0%
CGCATAGTTGTGGTTTACCT+TGG - chr7_1:68773248-68773267 Msa1033580:intron 45.0%
GATGACTCTTCTCTACGAAC+GGG - chr7_1:68773347-68773366 Msa1033580:intron 45.0%
AACGGGAAGGTCATTGTTTC+AGG - chr7_1:68773364-68773383 Msa1033580:intron 45.0%
ACTTCAGGCCAAAGCAAAAC+TGG + chr7_1:68773859-68773878 None:intergenic 45.0%
AACCCAATACACAGCACTTC+AGG + chr7_1:68773874-68773893 None:intergenic 45.0%
CAGCTGAGATTCTGTTCTCA+GGG + chr7_1:68774206-68774225 None:intergenic 45.0%
GCATGGAACACAATCAGCAA+TGG - chr7_1:68774244-68774263 Msa1033580:intron 45.0%
TCCAGTTTGTCATCTGTCAG+AGG + chr7_1:68774406-68774425 None:intergenic 45.0%
AAACTGGATGAAGCTGACAG+TGG - chr7_1:68774418-68774437 Msa1033580:intron 45.0%
GTGGTATCCTGAACTATCCT+AGG + chr7_1:68774490-68774509 None:intergenic 45.0%
AGGATAGTTCAGGATACCAC+TGG - chr7_1:68774490-68774509 Msa1033580:intron 45.0%
ATAGTTCAGGATACCACTGG+TGG - chr7_1:68774493-68774512 Msa1033580:intron 45.0%
!!! CTCACTCTTTTTTCAACCGG+TGG + chr7_1:68774586-68774605 None:intergenic 45.0%
! CACCGGTTGAAAAAAGAGTG+AGG - chr7_1:68774584-68774603 Msa1033580:intron 45.0%
CTTGGGTGATCTGATTGCTT+TGG + chr7_1:68774650-68774669 None:intergenic 45.0%
! CTACATCATGGCTGGCATTT+TGG + chr7_1:68774711-68774730 None:intergenic 45.0%
AGAAGACCCTCCACAAAGAA+TGG - chr7_1:68774729-68774748 Msa1033580:five_prime_UTR 45.0%
AACCGGTTGTCTTCTACAAG+TGG + chr7_1:68774821-68774840 None:intergenic 45.0%
TTCTCCTCCCTTTATGTTCC+TGG + chr7_1:68774861-68774880 None:intergenic 45.0%
ACGTAAAGGGTAGAAGAAGG+CGG - chr7_1:68775059-68775078 Msa1033580:intron 45.0%
TGTTGAAGCAGGAGTTAGGT+TGG - chr7_1:68775299-68775318 Msa1033580:five_prime_UTR 45.0%
GGTCGTCAACAGATTGAAGC+GGG - chr7_1:68772289-68772308 Msa1033580:CDS 50.0%
!! TTCTAGCTTCTCCCACTGGA+AGG - chr7_1:68772337-68772356 Msa1033580:CDS 50.0%
! TTGAGCATGTGTTGGCCACT+GGG + chr7_1:68772709-68772728 None:intergenic 50.0%
! TTTGAGCATGTGTTGGCCAC+TGG + chr7_1:68772710-68772729 None:intergenic 50.0%
AAACACACATACACGGGGAG+GGG - chr7_1:68772731-68772750 Msa1033580:CDS 50.0%
TGGAATCCCAGGTTTGATCC+CGG + chr7_1:68772770-68772789 None:intergenic 50.0%
CCTTCCTCAGAAATTGGGTC+CGG - chr7_1:68773148-68773167 Msa1033580:intron 50.0%
CTTCCTCAGAAATTGGGTCC+GGG - chr7_1:68773149-68773168 Msa1033580:intron 50.0%
TTCCTCAGAAATTGGGTCCG+GGG - chr7_1:68773150-68773169 Msa1033580:intron 50.0%
AGCTGTGTCGCGTAGTAATC+TGG - chr7_1:68773190-68773209 Msa1033580:intron 50.0%
GCTGTGTCGCGTAGTAATCT+GGG - chr7_1:68773191-68773210 Msa1033580:intron 50.0%
AACTATGCGATGAGGGTCAG+TGG + chr7_1:68773237-68773256 None:intergenic 50.0%
TGACCCTCATCGCATAGTTG+TGG - chr7_1:68773238-68773257 Msa1033580:intron 50.0%
AGAGCAAGACTCCAGCGTTA+TGG - chr7_1:68773287-68773306 Msa1033580:intron 50.0%
ACTCTTCTCTACGAACGGGA+AGG - chr7_1:68773351-68773370 Msa1033580:intron 50.0%
!! TGGCCTGAAGTGCTGTGTAT+TGG - chr7_1:68773868-68773887 Msa1033580:CDS 50.0%
!! GGCCTGAAGTGCTGTGTATT+GGG - chr7_1:68773869-68773888 Msa1033580:CDS 50.0%
ACTAGTGGCAAGCAAGAGAC+GGG + chr7_1:68773973-68773992 None:intergenic 50.0%
GACTAGTGGCAAGCAAGAGA+CGG + chr7_1:68773974-68773993 None:intergenic 50.0%
GCAGCTGAGATTCTGTTCTC+AGG + chr7_1:68774207-68774226 None:intergenic 50.0%
CAATCAGCAATGGTACACGG+AGG - chr7_1:68774254-68774273 Msa1033580:intron 50.0%
TGCTTCTACCTTTCACCCAG+AGG - chr7_1:68774347-68774366 Msa1033580:intron 50.0%
ACCTTTCACCCAGAGGAAAG+TGG - chr7_1:68774354-68774373 Msa1033580:intron 50.0%
CCTTTCACCCAGAGGAAAGT+GGG - chr7_1:68774355-68774374 Msa1033580:intron 50.0%
CTTTCACCCAGAGGAAAGTG+GGG - chr7_1:68774356-68774375 Msa1033580:intron 50.0%
TGGTATCCCCACTTTCCTCT+GGG + chr7_1:68774365-68774384 None:intergenic 50.0%
TTGGTATCCCCACTTTCCTC+TGG + chr7_1:68774366-68774385 None:intergenic 50.0%
GCCTCTGACAGATGACAAAC+TGG - chr7_1:68774402-68774421 Msa1033580:intron 50.0%
GTCACGTCCTAGGATAGTTC+AGG - chr7_1:68774480-68774499 Msa1033580:intron 50.0%
! GTGAGGTGTCCTGAACACAA+AGG - chr7_1:68774601-68774620 Msa1033580:intron 50.0%
TGATCTGATTGCTTTGGCGG+CGG + chr7_1:68774644-68774663 None:intergenic 50.0%
GGGTGATCTGATTGCTTTGG+CGG + chr7_1:68774647-68774666 None:intergenic 50.0%
AGGGTCTTCTACATCATGGC+TGG + chr7_1:68774719-68774738 None:intergenic 50.0%
GTGGAGGGTCTTCTACATCA+TGG + chr7_1:68774723-68774742 None:intergenic 50.0%
AACACACATACACGGGGAGG+GGG - chr7_1:68772732-68772751 Msa1033580:CDS 55.0%
TGTTGACCCGGGATCAAACC+TGG - chr7_1:68772760-68772779 Msa1033580:CDS 55.0%
GTTGACCCGGGATCAAACCT+GGG - chr7_1:68772761-68772780 Msa1033580:CDS 55.0%
GGAATCCCAGGTTTGATCCC+GGG + chr7_1:68772769-68772788 None:intergenic 55.0%
! CCGGACCCAATTTCTGAGGA+AGG + chr7_1:68773151-68773170 None:intergenic 55.0%
TCCTCAGAAATTGGGTCCGG+GGG - chr7_1:68773151-68773170 Msa1033580:intron 55.0%
CAAGACTCCAGCGTTATGGC+AGG - chr7_1:68773291-68773310 Msa1033580:intron 55.0%
CTCCAGCGTTATGGCAGGAA+TGG - chr7_1:68773296-68773315 Msa1033580:intron 55.0%
CTCCATTCCTGCCATAACGC+TGG + chr7_1:68773301-68773320 None:intergenic 55.0%
CCCACTTTCCTCTGGGTGAA+AGG + chr7_1:68774358-68774377 None:intergenic 55.0%
ATGAGTGGCACTACCACCAG+TGG + chr7_1:68774509-68774528 None:intergenic 55.0%
GGTGCCAGGAACATAAAGGG+AGG - chr7_1:68774854-68774873 Msa1033580:five_prime_UTR 55.0%
GGGTAGAAGAAGGCGGTTGA+AGG - chr7_1:68775066-68775085 Msa1033580:intron 55.0%
! GAGGGGGAAGTGTGTTGACC+CGG - chr7_1:68772748-68772767 Msa1033580:CDS 60.0%
! AGGGGGAAGTGTGTTGACCC+GGG - chr7_1:68772749-68772768 Msa1033580:CDS 60.0%
ACCCCCGGACCCAATTTCTG+AGG + chr7_1:68773155-68773174 None:intergenic 60.0%
ACTCCAAGCTCGTACACCCC+CGG + chr7_1:68773170-68773189 None:intergenic 60.0%
TGCGGAGTGATGTTGGCCGA+TGG - chr7_1:68774544-68774563 Msa1033580:intron 60.0%
! GGTCCGGGGGTGTACGAGCT+TGG - chr7_1:68773164-68773183 Msa1033580:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 68771658 68775327 68771658 ID=Msa1033580;Name=Msa1033580
chr7_1 mRNA 68771658 68775327 68771658 ID=Msa1033580-mRNA-1;Parent=Msa1033580;Name=Msa1033580-mRNA-1;_AED=0.04;_eAED=0.04;_QI=294|1|1|1|0.66|0.5|4|424|382
chr7_1 exon 68771658 68772801 68771658 ID=Msa1033580-mRNA-1:exon:16100;Parent=Msa1033580-mRNA-1
chr7_1 exon 68773555 68773911 68773555 ID=Msa1033580-mRNA-1:exon:16099;Parent=Msa1033580-mRNA-1
chr7_1 exon 68774627 68774893 68774627 ID=Msa1033580-mRNA-1:exon:16098;Parent=Msa1033580-mRNA-1
chr7_1 exon 68775229 68775327 68775229 ID=Msa1033580-mRNA-1:exon:16097;Parent=Msa1033580-mRNA-1
chr7_1 five_prime_UTR 68775229 68775327 68775229 ID=Msa1033580-mRNA-1:five_prime_utr;Parent=Msa1033580-mRNA-1
chr7_1 five_prime_UTR 68774699 68774893 68774699 ID=Msa1033580-mRNA-1:five_prime_utr;Parent=Msa1033580-mRNA-1
chr7_1 CDS 68774627 68774698 68774627 ID=Msa1033580-mRNA-1:cds;Parent=Msa1033580-mRNA-1
chr7_1 CDS 68773555 68773911 68773555 ID=Msa1033580-mRNA-1:cds;Parent=Msa1033580-mRNA-1
chr7_1 CDS 68772082 68772801 68772082 ID=Msa1033580-mRNA-1:cds;Parent=Msa1033580-mRNA-1
chr7_1 three_prime_UTR 68771658 68772081 68771658 ID=Msa1033580-mRNA-1:three_prime_utr;Parent=Msa1033580-mRNA-1
Gene Sequence

>Msa1033580

ATGGTCGTCAACAGATTGAAGCGGGAGCAATGTGACCGAACAAAACATGATTCTAGCTTCTCCCACTGGAAGATTCTTATCGGTCCTTCTGATTGGGAAGACTATTCCAAAGAAAAGGAAGGATCTACCAGATACAGGATTCACAACCTTCCTCAGAAATTGGGTCCGGGGGTGTACGAGCTTGGAGTAGCTGTGTCGCGTAGTAATCTGGGCCGTGAAATTTACAAGCTTGCCACTGACCCTCATCGCATAGTTGTGGTTTACCTTGGAAAAGCTGACAATGTGAGAGCAAGACTCCAGCGTTATGGCAGGAATGGAGCTCATTTGAATAACACTTGTATGTCAGATGACTCTTCTCTACGAACGGGAAGGTCATTGTTTCAGGAGATATTTTCACAAGGCTTCCCAATTGTTTATAGATGGGCTCCTATGCAAAACGAGGGAGATGCCCTGAGAACAGAATCTCAGCTGCTTAGTACATTTGATTATGCATGGAACACAATCAGCAATGGTACACGGAGGCCTGATGATATTCTTCAAATGCTCAACAAATTAGCTTCAGGCACTAGAACATTTTCAGATGTGGCCAAATTGCTTCTACCTTTCACCCAGAGGAAAGTGGGGATACCAATTAAATCAAGCAAGCTGCCTCTGACAGATGACAAACTGGATGAAGCTGACAGTGGCAGCTACAACGTCCTATCCCGTGTGTTCAAATTAAACAGGTCACGTCCTAGGATAGTTCAGGATACCACTGGTGGTAGTGCCACTCATGAGAATGCTAAAATTTGCGGAGTGATGTTGGCCGATGGTTCTATTTGTAAAAGGCCACCGGTTGAAAAAAGAGTGAGGTGTCCTGAACACAAAGGAATGAGAATAAATGCGTCCGCCGCCAAAGCAATCAGATCACCCAAGTCAGAATTAGAAAGCATTGTAGGTAATGCTTATAGGTACCAAAATGCCAGCCATGATGTAGAAGACCCTCCACAAAGAATGGTTAAGAGTCATGTTGATGAGGGTATCGCCAAAACCATTATGTGTGGAATCATCTTGGATGATGGATCCACTTGTAGAAGACAACCGGTTAAAGGAAGAAAAAGGTGCCAGGAACATAAAGGGAGGAGAATTCGTGCAAATTCGAAAAAATAA
Protein sequence

>Msa1033580

MVVNRLKREQCDRTKHDSSFSHWKILIGPSDWEDYSKEKEGSTRYRIHNLPQKLGPGVYELGVAVSRSNLGREIYKLATDPHRIVVVYLGKADNVRARLQRYGRNGAHLNNTCMSDDSSLRTGRSLFQEIFSQGFPIVYRWAPMQNEGDALRTESQLLSTFDYAWNTISNGTRRPDDILQMLNKLASGTRTFSDVAKLLLPFTQRKVGIPIKSSKLPLTDDKLDEADSGSYNVLSRVFKLNRSRPRIVQDTTGGSATHENAKICGVMLADGSICKRPPVEKRVRCPEHKGMRINASAAKAIRSPKSELESIVGNAYRYQNASHDVEDPPQRMVKSHVDEGIAKTIMCGIILDDGSTCRRQPVKGRKRCQEHKGRRIRANSKK*