Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035180 | XP_003625243.2 | 91.033 | 368 | 22 | 3 | 1 | 366 | 1 | 359 | 0.0 | 662 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035180 | sp|Q0WVU3|PHL5_ARATH | 44.444 | 135 | 73 | 1 | 218 | 350 | 186 | 320 | 5.70e-26 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035180 | G7KVB9 | 91.033 | 368 | 22 | 3 | 1 | 366 | 1 | 359 | 0.0 | 662 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1035180 | TF | GARP-G2-like |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035180 | MtrunA17_Chr7g0258531 | 91.033 | 368 | 22 | 3 | 1 | 366 | 1 | 359 | 0.0 | 662 |
| Msa1035180 | MtrunA17_Chr1g0175071 | 41.441 | 333 | 157 | 9 | 35 | 356 | 9 | 314 | 3.20e-57 | 189 |
| Msa1035180 | MtrunA17_Chr1g0175091 | 43.275 | 171 | 87 | 3 | 191 | 352 | 220 | 389 | 6.74e-31 | 121 |
| Msa1035180 | MtrunA17_Chr7g0258551 | 44.604 | 139 | 75 | 1 | 222 | 358 | 212 | 350 | 3.93e-27 | 110 |
| Msa1035180 | MtrunA17_Chr1g0190301 | 42.647 | 136 | 77 | 1 | 212 | 346 | 165 | 300 | 3.80e-25 | 105 |
| Msa1035180 | MtrunA17_Chr7g0261911 | 39.394 | 165 | 86 | 4 | 190 | 346 | 229 | 387 | 1.71e-24 | 104 |
| Msa1035180 | MtrunA17_Chr7g0274471 | 43.651 | 126 | 70 | 1 | 222 | 346 | 218 | 343 | 1.84e-23 | 100 |
| Msa1035180 | MtrunA17_Chr2g0291021 | 41.912 | 136 | 68 | 3 | 222 | 350 | 49 | 180 | 1.01e-21 | 94.7 |
| Msa1035180 | MtrunA17_Chr7g0254981 | 33.548 | 155 | 91 | 2 | 204 | 350 | 32 | 182 | 8.65e-21 | 90.9 |
| Msa1035180 | MtrunA17_Chr5g0409731 | 37.241 | 145 | 75 | 3 | 222 | 351 | 25 | 168 | 2.51e-17 | 81.6 |
| Msa1035180 | MtrunA17_Chr6g0461641 | 35.461 | 141 | 74 | 2 | 221 | 344 | 41 | 181 | 6.29e-16 | 78.6 |
| Msa1035180 | MtrunA17_Chr8g0356501 | 36.923 | 130 | 72 | 3 | 222 | 344 | 37 | 163 | 1.22e-15 | 77.4 |
| Msa1035180 | MtrunA17_Chr2g0310011 | 36.154 | 130 | 73 | 3 | 222 | 344 | 35 | 161 | 3.98e-15 | 75.9 |
| Msa1035180 | MtrunA17_Chr2g0321461 | 33.113 | 151 | 68 | 3 | 221 | 344 | 44 | 188 | 8.74e-15 | 75.1 |
| Msa1035180 | MtrunA17_Chr1g0197171 | 33.803 | 142 | 90 | 1 | 222 | 363 | 44 | 181 | 2.11e-14 | 73.2 |
| Msa1035180 | MtrunA17_Chr7g0242521 | 35.433 | 127 | 79 | 1 | 220 | 343 | 11 | 137 | 3.75e-14 | 71.2 |
| Msa1035180 | MtrunA17_Chr2g0290991 | 32.886 | 149 | 85 | 3 | 222 | 363 | 39 | 179 | 1.08e-13 | 71.2 |
| Msa1035180 | MtrunA17_Chr8g0379121 | 60.377 | 53 | 21 | 0 | 224 | 276 | 113 | 165 | 1.02e-12 | 68.9 |
| Msa1035180 | MtrunA17_Chr1g0175081 | 43.182 | 88 | 44 | 3 | 206 | 292 | 5 | 87 | 1.57e-12 | 63.5 |
| Msa1035180 | MtrunA17_Chr4g0042451 | 31.852 | 135 | 80 | 2 | 222 | 344 | 17 | 151 | 3.44e-12 | 67.0 |
| Msa1035180 | MtrunA17_Chr2g0288601 | 43.243 | 74 | 38 | 1 | 199 | 272 | 52 | 121 | 7.15e-12 | 62.4 |
| Msa1035180 | MtrunA17_Chr3g0095611 | 53.704 | 54 | 25 | 0 | 224 | 277 | 21 | 74 | 1.59e-11 | 63.2 |
| Msa1035180 | MtrunA17_Chr2g0320231 | 56.604 | 53 | 23 | 0 | 224 | 276 | 99 | 151 | 2.67e-11 | 64.3 |
| Msa1035180 | MtrunA17_Chr1g0162931 | 45.714 | 70 | 37 | 1 | 224 | 293 | 20 | 88 | 3.51e-11 | 63.2 |
| Msa1035180 | MtrunA17_Chr7g0243081 | 56.604 | 53 | 23 | 0 | 224 | 276 | 73 | 125 | 4.98e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035180 | AT5G06800.1 | 44.444 | 135 | 73 | 1 | 218 | 350 | 186 | 320 | 5.79e-27 | 110 |
| Msa1035180 | AT5G06800.2 | 45.000 | 140 | 70 | 2 | 218 | 350 | 186 | 325 | 2.17e-26 | 108 |
| Msa1035180 | AT2G01060.1 | 38.272 | 162 | 88 | 3 | 210 | 365 | 3 | 158 | 7.39e-24 | 100 |
| Msa1035180 | AT3G13040.3 | 30.519 | 308 | 159 | 11 | 96 | 364 | 98 | 389 | 5.07e-23 | 100 |
| Msa1035180 | AT3G13040.1 | 30.519 | 308 | 159 | 11 | 96 | 364 | 98 | 389 | 5.07e-23 | 100 |
| Msa1035180 | AT3G13040.2 | 30.519 | 308 | 159 | 11 | 96 | 364 | 98 | 389 | 5.07e-23 | 100 |
| Msa1035180 | AT5G29000.2 | 40.141 | 142 | 79 | 3 | 210 | 346 | 219 | 359 | 7.83e-23 | 99.4 |
| Msa1035180 | AT5G29000.1 | 40.141 | 142 | 79 | 3 | 210 | 346 | 176 | 316 | 9.33e-23 | 98.6 |
| Msa1035180 | AT5G29000.3 | 40.141 | 142 | 79 | 3 | 210 | 346 | 176 | 316 | 9.33e-23 | 98.6 |
| Msa1035180 | AT3G04450.1 | 40.909 | 132 | 72 | 2 | 220 | 346 | 236 | 366 | 1.23e-22 | 99.0 |
| Msa1035180 | AT3G04450.4 | 40.909 | 132 | 72 | 2 | 220 | 346 | 196 | 326 | 1.52e-22 | 98.2 |
| Msa1035180 | AT3G04450.2 | 40.909 | 132 | 72 | 2 | 220 | 346 | 196 | 326 | 1.52e-22 | 98.2 |
| Msa1035180 | AT4G28610.1 | 41.497 | 147 | 81 | 3 | 202 | 346 | 208 | 351 | 1.84e-22 | 98.2 |
| Msa1035180 | AT4G13640.1 | 36.765 | 136 | 73 | 3 | 222 | 344 | 37 | 172 | 6.06e-17 | 80.9 |
| Msa1035180 | AT1G79430.2 | 37.500 | 128 | 74 | 3 | 222 | 344 | 34 | 160 | 1.38e-16 | 80.5 |
| Msa1035180 | AT2G20400.1 | 38.686 | 137 | 72 | 3 | 222 | 352 | 231 | 361 | 1.93e-16 | 80.5 |
| Msa1035180 | AT3G24120.1 | 36.765 | 136 | 73 | 2 | 222 | 344 | 41 | 176 | 2.28e-16 | 79.3 |
| Msa1035180 | AT2G20400.2 | 38.686 | 137 | 73 | 3 | 222 | 352 | 231 | 362 | 4.65e-16 | 79.3 |
| Msa1035180 | AT3G04030.3 | 34.965 | 143 | 71 | 3 | 221 | 344 | 44 | 183 | 9.38e-16 | 78.6 |
| Msa1035180 | AT5G18240.1 | 34.286 | 140 | 76 | 2 | 221 | 344 | 44 | 183 | 1.55e-15 | 77.8 |
| Msa1035180 | AT5G18240.4 | 34.286 | 140 | 76 | 2 | 221 | 344 | 44 | 183 | 1.55e-15 | 77.8 |
| Msa1035180 | AT5G06800.3 | 61.667 | 60 | 21 | 1 | 218 | 275 | 186 | 245 | 2.07e-15 | 76.3 |
| Msa1035180 | AT4G13640.2 | 35.971 | 139 | 73 | 4 | 222 | 344 | 37 | 175 | 3.69e-15 | 75.5 |
| Msa1035180 | AT1G69580.1 | 34.868 | 152 | 75 | 4 | 222 | 351 | 34 | 183 | 1.20e-14 | 74.7 |
| Msa1035180 | AT3G24120.2 | 35.971 | 139 | 73 | 3 | 222 | 344 | 41 | 179 | 1.21e-14 | 74.3 |
| Msa1035180 | AT1G69580.2 | 33.987 | 153 | 76 | 4 | 222 | 351 | 34 | 184 | 3.87e-14 | 73.2 |
| Msa1035180 | AT5G29000.4 | 48.529 | 68 | 35 | 0 | 210 | 277 | 219 | 286 | 7.06e-14 | 72.0 |
| Msa1035180 | AT3G04450.3 | 51.724 | 58 | 28 | 0 | 220 | 277 | 236 | 293 | 2.17e-13 | 70.5 |
| Msa1035180 | AT2G42660.1 | 60.377 | 53 | 21 | 0 | 224 | 276 | 52 | 104 | 2.26e-13 | 69.7 |
| Msa1035180 | AT5G18240.5 | 33.571 | 140 | 75 | 3 | 221 | 344 | 44 | 181 | 2.71e-13 | 70.9 |
| Msa1035180 | AT3G12730.1 | 54.098 | 61 | 28 | 0 | 222 | 282 | 23 | 83 | 3.94e-13 | 68.9 |
| Msa1035180 | AT3G04030.2 | 33.566 | 143 | 72 | 4 | 221 | 344 | 44 | 182 | 4.90e-13 | 70.1 |
| Msa1035180 | AT2G06020.1 | 31.387 | 137 | 80 | 3 | 147 | 275 | 9 | 139 | 1.87e-12 | 67.8 |
| Msa1035180 | AT4G04605.1 | 47.619 | 63 | 32 | 1 | 224 | 286 | 16 | 77 | 4.17e-12 | 65.5 |
| Msa1035180 | AT3G04030.1 | 33.333 | 126 | 62 | 3 | 221 | 327 | 44 | 166 | 1.36e-11 | 65.9 |
| Msa1035180 | AT5G18240.2 | 30.556 | 144 | 79 | 3 | 221 | 343 | 44 | 187 | 1.65e-11 | 65.5 |
| Msa1035180 | AT5G18240.3 | 30.556 | 144 | 79 | 3 | 221 | 343 | 44 | 187 | 1.65e-11 | 65.5 |
| Msa1035180 | AT2G40260.1 | 54.717 | 53 | 24 | 0 | 224 | 276 | 84 | 136 | 1.78e-11 | 65.5 |
| Msa1035180 | AT1G14600.1 | 45.455 | 77 | 38 | 1 | 205 | 277 | 2 | 78 | 4.21e-11 | 63.2 |
| Msa1035180 | AT4G04555.1 | 54.902 | 51 | 23 | 0 | 226 | 276 | 18 | 68 | 6.40e-11 | 59.3 |
| Msa1035180 | AT2G38300.1 | 56.604 | 53 | 23 | 0 | 224 | 276 | 56 | 108 | 9.01e-11 | 63.2 |
Find 60 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAACAATTGACCTGTTATT+TGG | 0.085317 | 7_1:+70916151 | None:intergenic |
| GAACCAACCAAAGAAAATTT+TGG | 0.205784 | 7_1:-70916196 | Msa1035180:CDS |
| CTTCTAACAATTCTGCTTCT+AGG | 0.211425 | 7_1:-70917153 | Msa1035180:CDS |
| AAGCAGACTCCTCAACTTAA+TGG | 0.254270 | 7_1:-70917187 | Msa1035180:CDS |
| GAGGATGAGATTGAAGTTTC+TGG | 0.281912 | 7_1:-70918304 | Msa1035180:CDS |
| AAGTATTTCGCAACAGTTAG+AGG | 0.311657 | 7_1:-70916416 | Msa1035180:intron |
| AAACAATTGACCTGTTATTT+GGG | 0.315634 | 7_1:+70916152 | None:intergenic |
| CAAACATCTCATGATGGTTT+TGG | 0.318369 | 7_1:-70918388 | Msa1035180:CDS |
| ATTGGAGGGTCTGTTATCTT+TGG | 0.328987 | 7_1:+70918262 | None:intergenic |
| TCATGTTAAAAGCCATTTGC+AGG | 0.345777 | 7_1:-70916911 | Msa1035180:intron |
| ACGCATGCATAAAGCTTTGC+AGG | 0.361361 | 7_1:-70916764 | Msa1035180:CDS |
| GTGATTCCTCAATTTGCTTA+AGG | 0.361437 | 7_1:+70916464 | None:intergenic |
| TTCAAGGGGCTTCTCATCAA+TGG | 0.375794 | 7_1:+70918033 | None:intergenic |
| AACAACCTAGTTAAGGTTGT+TGG | 0.392826 | 7_1:-70918499 | Msa1035180:CDS |
| TTCTCTGAAAAGAAATTTCA+AGG | 0.402613 | 7_1:+70918017 | None:intergenic |
| TAGGTTGTTAATTCCTATGT+AGG | 0.408171 | 7_1:+70918513 | None:intergenic |
| AGGAATTAACAACCTAGTTA+AGG | 0.413307 | 7_1:-70918506 | Msa1035180:CDS |
| TGTAGTGACAATGTTGTTGC+AGG | 0.413465 | 7_1:+70918423 | None:intergenic |
| TGTGTTCTGATCCAACAATT+TGG | 0.429748 | 7_1:+70918470 | None:intergenic |
| ACAACCTAGTTAAGGTTGTT+GGG | 0.437913 | 7_1:-70918498 | Msa1035180:CDS |
| CAACATTGGTCAAAGATGTA+TGG | 0.453490 | 7_1:-70918550 | Msa1035180:CDS |
| GTTGGGTCAGACCAAATTGT+TGG | 0.464581 | 7_1:-70918481 | Msa1035180:CDS |
| CATACATCTTTGACCAATGT+TGG | 0.474221 | 7_1:+70918551 | None:intergenic |
| CAAAGATGTATGGAACTCAA+TGG | 0.475646 | 7_1:-70918540 | Msa1035180:CDS |
| TGTAAAATTCTCTCCTCCAT+AGG | 0.496495 | 7_1:+70918225 | None:intergenic |
| AAAGATGTATGGAACTCAAT+GGG | 0.496984 | 7_1:-70918539 | Msa1035180:CDS |
| TCTGTTCTATGTCCTTCCTC+AGG | 0.498706 | 7_1:+70916642 | None:intergenic |
| ATGCTGAATTGTCAAGCCTA+TGG | 0.501729 | 7_1:-70918241 | Msa1035180:CDS |
| CTTTGACCAATGTTGGTACA+TGG | 0.506794 | 7_1:+70918558 | None:intergenic |
| TTGTTGCAGGGTGACTTGAT+TGG | 0.508916 | 7_1:+70918436 | None:intergenic |
| CAAGGTCAAACATCTCATGA+TGG | 0.511209 | 7_1:-70918394 | Msa1035180:CDS |
| CTGACCCAACAACCTTAACT+AGG | 0.516049 | 7_1:+70918494 | None:intergenic |
| TAGCAGCCTTAAGCAAATTG+AGG | 0.522396 | 7_1:-70916470 | Msa1035180:intron |
| GCTTGACAATTCAGCATTGG+AGG | 0.527222 | 7_1:+70918247 | None:intergenic |
| CTCTGAAAAGAAATTTCAAG+GGG | 0.530710 | 7_1:+70918019 | None:intergenic |
| CATGTAAAAGAAGAGTAAGA+TGG | 0.531937 | 7_1:-70917120 | Msa1035180:CDS |
| TCTCTGAAAAGAAATTTCAA+GGG | 0.533832 | 7_1:+70918018 | None:intergenic |
| TAGGCTTGACAATTCAGCAT+TGG | 0.547239 | 7_1:+70918244 | None:intergenic |
| AGATTCATCAACAGAGTACA+AGG | 0.551613 | 7_1:+70918183 | None:intergenic |
| AATTGCAGAGGCAAAGCCTA+AGG | 0.561046 | 7_1:-70916974 | Msa1035180:intron |
| ATGATAATCGTTGATCACCT+TGG | 0.567335 | 7_1:-70917073 | Msa1035180:CDS |
| ATCATATCTAGTATAGCCTT+AGG | 0.576046 | 7_1:+70916958 | None:intergenic |
| ACTCAATGGGAATCCTACAT+AGG | 0.576742 | 7_1:-70918526 | Msa1035180:CDS |
| AGAAGCAGAATTGTTAGAAG+TGG | 0.580769 | 7_1:+70917156 | None:intergenic |
| CTTGACAATTCAGCATTGGA+GGG | 0.587253 | 7_1:+70918248 | None:intergenic |
| ATAATCGTTGATCACCTTGG+TGG | 0.592004 | 7_1:-70917070 | Msa1035180:CDS |
| ATGAGATTGAAGTTTCTGGT+TGG | 0.603059 | 7_1:-70918300 | Msa1035180:CDS |
| AACCAACCATGTACCAACAT+TGG | 0.603963 | 7_1:-70918564 | None:intergenic |
| TTAAGCAAATTGAGGAATCA+CGG | 0.605256 | 7_1:-70916462 | Msa1035180:CDS |
| GCACACATTCCATTAAGTTG+AGG | 0.605770 | 7_1:+70917178 | None:intergenic |
| CGCATGCATAAAGCTTTGCA+GGG | 0.606639 | 7_1:-70916763 | Msa1035180:intron |
| CTGAATTGTCAAGCCTATGG+AGG | 0.616055 | 7_1:-70918238 | Msa1035180:CDS |
| AAGAAGAGTAAGATGGACAG+AGG | 0.623246 | 7_1:-70917113 | Msa1035180:CDS |
| ATCACGGCAGTTGCATCTAG+AGG | 0.629262 | 7_1:-70916446 | Msa1035180:CDS |
| CTTTCAGAAAGACCTGAGGA+AGG | 0.638784 | 7_1:-70916654 | Msa1035180:intron |
| AGGTGAAGAATATTATGATG+AGG | 0.647413 | 7_1:-70918323 | Msa1035180:CDS |
| GTAGTGACAATGTTGTTGCA+GGG | 0.658470 | 7_1:+70918424 | None:intergenic |
| CAAGGAGTTTGTGAACTGAG+AGG | 0.666646 | 7_1:+70918201 | None:intergenic |
| TTATCTTTCAGAAAGACCTG+AGG | 0.675030 | 7_1:-70916658 | Msa1035180:intron |
| ACTTACTTTCTGGACCACCA+AGG | 0.699661 | 7_1:+70917056 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAACAAATAAAAACA+AGG | + | chr7_1:70918426-70918445 | None:intergenic | 10.0% |
| !! | AAAAATAACAAATAAAAACA+AGG | + | chr7_1:70918426-70918445 | None:intergenic | 10.0% |
| !! | ATCTAATACTATAATTAAAC+AGG | + | chr7_1:70916897-70916916 | None:intergenic | 15.0% |
| !!! | TCATGGATTTTTTTTTTTAA+TGG | - | chr7_1:70916943-70916962 | Msa1035180:CDS | 15.0% |
| !! | TGAATCTAATTATGAAATTT+AGG | - | chr7_1:70917080-70917099 | Msa1035180:CDS | 15.0% |
| !! | GAATCTAATTATGAAATTTA+GGG | - | chr7_1:70917081-70917100 | Msa1035180:CDS | 15.0% |
| !! | TCTAATAAAATTGATTAAAG+TGG | - | chr7_1:70917162-70917181 | Msa1035180:CDS | 15.0% |
| !! | AAAACTAAAAAGAAAATCAA+TGG | - | chr7_1:70917218-70917237 | Msa1035180:intron | 15.0% |
| !! | TTACTAGTAATCTATTTATT+CGG | - | chr7_1:70917368-70917387 | Msa1035180:intron | 15.0% |
| !! | AGGAAAATAAACAAATAAAA+AGG | + | chr7_1:70917458-70917477 | None:intergenic | 15.0% |
| !! | AAATTATTGAAATTGTTGAA+TGG | + | chr7_1:70917848-70917867 | None:intergenic | 15.0% |
| !! | ATCTAATACTATAATTAAAC+AGG | + | chr7_1:70916897-70916916 | None:intergenic | 15.0% |
| !!! | TCATGGATTTTTTTTTTTAA+TGG | - | chr7_1:70916943-70916962 | Msa1035180:CDS | 15.0% |
| !! | TGAATCTAATTATGAAATTT+AGG | - | chr7_1:70917080-70917099 | Msa1035180:CDS | 15.0% |
| !! | GAATCTAATTATGAAATTTA+GGG | - | chr7_1:70917081-70917100 | Msa1035180:CDS | 15.0% |
| !! | TCTAATAAAATTGATTAAAG+TGG | - | chr7_1:70917162-70917181 | Msa1035180:CDS | 15.0% |
| !! | AAAACTAAAAAGAAAATCAA+TGG | - | chr7_1:70917218-70917237 | Msa1035180:intron | 15.0% |
| !! | TTACTAGTAATCTATTTATT+CGG | - | chr7_1:70917368-70917387 | Msa1035180:intron | 15.0% |
| !! | AGGAAAATAAACAAATAAAA+AGG | + | chr7_1:70917458-70917477 | None:intergenic | 15.0% |
| !! | AAATTATTGAAATTGTTGAA+TGG | + | chr7_1:70917848-70917867 | None:intergenic | 15.0% |
| !!! | ACTAACATTACTTTTGATTT+TGG | + | chr7_1:70916374-70916393 | None:intergenic | 20.0% |
| !!! | AAAAGTAATGTTAGTTTTCA+AGG | - | chr7_1:70916379-70916398 | Msa1035180:intron | 20.0% |
| !!! | AACAATTCATCATGTTTTTT+CGG | + | chr7_1:70916655-70916674 | None:intergenic | 20.0% |
| !! | AAAAACATGATGAATTGTTT+AGG | - | chr7_1:70916656-70916675 | Msa1035180:intron | 20.0% |
| !! | CATTTCATATATAATTCAGA+TGG | + | chr7_1:70916786-70916805 | None:intergenic | 20.0% |
| !!! | AAGAATACTGTAACTTTTTT+TGG | + | chr7_1:70916861-70916880 | None:intergenic | 20.0% |
| !! | AAATCCATGAAATACTTAAA+AGG | + | chr7_1:70916933-70916952 | None:intergenic | 20.0% |
| !! | AATTAGATTCATTGCATATA+TGG | + | chr7_1:70917071-70917090 | None:intergenic | 20.0% |
| !!! | TCACATAAACATTCTTTTAA+CGG | - | chr7_1:70917185-70917204 | Msa1035180:CDS | 20.0% |
| !!! | AGTTGGGAATTTTTTTTTAA+AGG | - | chr7_1:70917262-70917281 | Msa1035180:intron | 20.0% |
| !! | TACTAGTAATCTATTTATTC+GGG | - | chr7_1:70917369-70917388 | Msa1035180:intron | 20.0% |
| !! | TTAGTTAATTACTTACTTTC+TGG | + | chr7_1:70917679-70917698 | None:intergenic | 20.0% |
| !! | AATATACAATTATGCTTTGA+TGG | - | chr7_1:70918330-70918349 | Msa1035180:CDS | 20.0% |
| !!! | ACTAACATTACTTTTGATTT+TGG | + | chr7_1:70916374-70916393 | None:intergenic | 20.0% |
| !!! | AAAAGTAATGTTAGTTTTCA+AGG | - | chr7_1:70916379-70916398 | Msa1035180:intron | 20.0% |
| !!! | AACAATTCATCATGTTTTTT+CGG | + | chr7_1:70916655-70916674 | None:intergenic | 20.0% |
| !! | AAAAACATGATGAATTGTTT+AGG | - | chr7_1:70916656-70916675 | Msa1035180:intron | 20.0% |
| !! | CATTTCATATATAATTCAGA+TGG | + | chr7_1:70916786-70916805 | None:intergenic | 20.0% |
| !!! | AAGAATACTGTAACTTTTTT+TGG | + | chr7_1:70916861-70916880 | None:intergenic | 20.0% |
| !! | AAATCCATGAAATACTTAAA+AGG | + | chr7_1:70916933-70916952 | None:intergenic | 20.0% |
| !! | AATTAGATTCATTGCATATA+TGG | + | chr7_1:70917071-70917090 | None:intergenic | 20.0% |
| !!! | TCACATAAACATTCTTTTAA+CGG | - | chr7_1:70917185-70917204 | Msa1035180:CDS | 20.0% |
| !!! | AGTTGGGAATTTTTTTTTAA+AGG | - | chr7_1:70917262-70917281 | Msa1035180:intron | 20.0% |
| !! | TACTAGTAATCTATTTATTC+GGG | - | chr7_1:70917369-70917388 | Msa1035180:intron | 20.0% |
| !! | TTAGTTAATTACTTACTTTC+TGG | + | chr7_1:70917679-70917698 | None:intergenic | 20.0% |
| !! | AATATACAATTATGCTTTGA+TGG | - | chr7_1:70918330-70918349 | Msa1035180:CDS | 20.0% |
| !! | ATTGTCACTACAAATTTTCA+AGG | - | chr7_1:70916310-70916329 | Msa1035180:intron | 25.0% |
| !! | GAATATAGTAATTTTCAGTC+TGG | - | chr7_1:70916604-70916623 | Msa1035180:intron | 25.0% |
| !! | TCTCTGAAAAGAAATTTCAA+GGG | + | chr7_1:70916707-70916726 | None:intergenic | 25.0% |
| !! | TTCTCTGAAAAGAAATTTCA+AGG | + | chr7_1:70916708-70916727 | None:intergenic | 25.0% |
| !! | AATTTCTTTTCAGAGAACTA+AGG | - | chr7_1:70916711-70916730 | Msa1035180:intron | 25.0% |
| !!! | TAGTCCTTTTAAGTATTTCA+TGG | - | chr7_1:70916926-70916945 | Msa1035180:CDS | 25.0% |
| !!! | AAATTTAGGGTTTTGTGAAA+GGG | - | chr7_1:70917094-70917113 | Msa1035180:CDS | 25.0% |
| ! | ATTAGAAAAACACGTTAGAT+TGG | + | chr7_1:70917148-70917167 | None:intergenic | 25.0% |
| ! | TGGATTATAGCTTATTAGAA+AGG | + | chr7_1:70917478-70917497 | None:intergenic | 25.0% |
| !!! | TTTTTTTCTCTTCTGATTAC+TGG | - | chr7_1:70918194-70918213 | Msa1035180:CDS | 25.0% |
| ! | CAAATAAAAACAAGGTTGTA+AGG | + | chr7_1:70918418-70918437 | None:intergenic | 25.0% |
| !! | ATTGTCACTACAAATTTTCA+AGG | - | chr7_1:70916310-70916329 | Msa1035180:intron | 25.0% |
| !! | GAATATAGTAATTTTCAGTC+TGG | - | chr7_1:70916604-70916623 | Msa1035180:intron | 25.0% |
| !! | TCTCTGAAAAGAAATTTCAA+GGG | + | chr7_1:70916707-70916726 | None:intergenic | 25.0% |
| !! | TTCTCTGAAAAGAAATTTCA+AGG | + | chr7_1:70916708-70916727 | None:intergenic | 25.0% |
| !! | AATTTCTTTTCAGAGAACTA+AGG | - | chr7_1:70916711-70916730 | Msa1035180:intron | 25.0% |
| !!! | TAGTCCTTTTAAGTATTTCA+TGG | - | chr7_1:70916926-70916945 | Msa1035180:CDS | 25.0% |
| !!! | AAATTTAGGGTTTTGTGAAA+GGG | - | chr7_1:70917094-70917113 | Msa1035180:CDS | 25.0% |
| ! | ATTAGAAAAACACGTTAGAT+TGG | + | chr7_1:70917148-70917167 | None:intergenic | 25.0% |
| ! | TGGATTATAGCTTATTAGAA+AGG | + | chr7_1:70917478-70917497 | None:intergenic | 25.0% |
| !!! | TTTTTTTCTCTTCTGATTAC+TGG | - | chr7_1:70918194-70918213 | Msa1035180:CDS | 25.0% |
| ! | CAAATAAAAACAAGGTTGTA+AGG | + | chr7_1:70918418-70918437 | None:intergenic | 25.0% |
| AAAGATGTATGGAACTCAAT+GGG | - | chr7_1:70916183-70916202 | Msa1035180:CDS | 30.0% | |
| TAGGTTGTTAATTCCTATGT+AGG | + | chr7_1:70916212-70916231 | None:intergenic | 30.0% | |
| AGGAATTAACAACCTAGTTA+AGG | - | chr7_1:70916216-70916235 | Msa1035180:CDS | 30.0% | |
| AGGTGAAGAATATTATGATG+AGG | - | chr7_1:70916399-70916418 | Msa1035180:intron | 30.0% | |
| ! | CTCTGAAAAGAAATTTCAAG+GGG | + | chr7_1:70916706-70916725 | None:intergenic | 30.0% |
| TGGTTTCATCTATTTGTGAA+TGG | - | chr7_1:70916963-70916982 | Msa1035180:CDS | 30.0% | |
| !! | GAAATTTAGGGTTTTGTGAA+AGG | - | chr7_1:70917093-70917112 | Msa1035180:CDS | 30.0% |
| AAAGGGACAATAATGAATTG+CGG | - | chr7_1:70917111-70917130 | Msa1035180:CDS | 30.0% | |
| ! | AAACATTCTTTTAACGGAGT+TGG | - | chr7_1:70917191-70917210 | Msa1035180:CDS | 30.0% |
| AAGTTATGGGACTTATAGTT+GGG | - | chr7_1:70917246-70917265 | Msa1035180:intron | 30.0% | |
| ! | CTTACTCTTCTTTTACATGT+TGG | + | chr7_1:70917601-70917620 | None:intergenic | 30.0% |
| CATGTAAAAGAAGAGTAAGA+TGG | - | chr7_1:70917602-70917621 | Msa1035180:intron | 30.0% | |
| ! | TTCACTGATTATAATTGCAG+AGG | - | chr7_1:70917736-70917755 | Msa1035180:intron | 30.0% |
| ATCATATCTAGTATAGCCTT+AGG | + | chr7_1:70917767-70917786 | None:intergenic | 30.0% | |
| ! | ATGGCTTTTAACATGAGAAA+TGG | + | chr7_1:70917807-70917826 | None:intergenic | 30.0% |
| !! | GAAATAGTTTTACCTGCAAA+TGG | + | chr7_1:70917826-70917845 | None:intergenic | 30.0% |
| ACAATGTTAGAGTCAATTAC+CGG | + | chr7_1:70917900-70917919 | None:intergenic | 30.0% | |
| ACAACACTGCTTACTTATTA+AGG | - | chr7_1:70918010-70918029 | Msa1035180:intron | 30.0% | |
| TTAAGCAAATTGAGGAATCA+CGG | - | chr7_1:70918260-70918279 | Msa1035180:CDS | 30.0% | |
| ! | GAACCAACCAAAGAAAATTT+TGG | - | chr7_1:70918526-70918545 | Msa1035180:CDS | 30.0% |
| ! | TGTCCAAAATTTTCTTTGGT+TGG | + | chr7_1:70918532-70918551 | None:intergenic | 30.0% |
| ! | GTTGTGTCCAAAATTTTCTT+TGG | + | chr7_1:70918536-70918555 | None:intergenic | 30.0% |
| AAAGATGTATGGAACTCAAT+GGG | - | chr7_1:70916183-70916202 | Msa1035180:CDS | 30.0% | |
| TAGGTTGTTAATTCCTATGT+AGG | + | chr7_1:70916212-70916231 | None:intergenic | 30.0% | |
| AGGAATTAACAACCTAGTTA+AGG | - | chr7_1:70916216-70916235 | Msa1035180:CDS | 30.0% | |
| AGGTGAAGAATATTATGATG+AGG | - | chr7_1:70916399-70916418 | Msa1035180:intron | 30.0% | |
| ! | CTCTGAAAAGAAATTTCAAG+GGG | + | chr7_1:70916706-70916725 | None:intergenic | 30.0% |
| TGGTTTCATCTATTTGTGAA+TGG | - | chr7_1:70916963-70916982 | Msa1035180:CDS | 30.0% | |
| !! | GAAATTTAGGGTTTTGTGAA+AGG | - | chr7_1:70917093-70917112 | Msa1035180:CDS | 30.0% |
| AAAGGGACAATAATGAATTG+CGG | - | chr7_1:70917111-70917130 | Msa1035180:CDS | 30.0% | |
| ! | AAACATTCTTTTAACGGAGT+TGG | - | chr7_1:70917191-70917210 | Msa1035180:CDS | 30.0% |
| AAGTTATGGGACTTATAGTT+GGG | - | chr7_1:70917246-70917265 | Msa1035180:intron | 30.0% | |
| ! | CTTACTCTTCTTTTACATGT+TGG | + | chr7_1:70917601-70917620 | None:intergenic | 30.0% |
| CATGTAAAAGAAGAGTAAGA+TGG | - | chr7_1:70917602-70917621 | Msa1035180:intron | 30.0% | |
| ! | TTCACTGATTATAATTGCAG+AGG | - | chr7_1:70917736-70917755 | Msa1035180:intron | 30.0% |
| ATCATATCTAGTATAGCCTT+AGG | + | chr7_1:70917767-70917786 | None:intergenic | 30.0% | |
| ! | ATGGCTTTTAACATGAGAAA+TGG | + | chr7_1:70917807-70917826 | None:intergenic | 30.0% |
| !! | GAAATAGTTTTACCTGCAAA+TGG | + | chr7_1:70917826-70917845 | None:intergenic | 30.0% |
| ACAATGTTAGAGTCAATTAC+CGG | + | chr7_1:70917900-70917919 | None:intergenic | 30.0% | |
| ACAACACTGCTTACTTATTA+AGG | - | chr7_1:70918010-70918029 | Msa1035180:intron | 30.0% | |
| TTAAGCAAATTGAGGAATCA+CGG | - | chr7_1:70918260-70918279 | Msa1035180:CDS | 30.0% | |
| ! | GAACCAACCAAAGAAAATTT+TGG | - | chr7_1:70918526-70918545 | Msa1035180:CDS | 30.0% |
| ! | TGTCCAAAATTTTCTTTGGT+TGG | + | chr7_1:70918532-70918551 | None:intergenic | 30.0% |
| ! | GTTGTGTCCAAAATTTTCTT+TGG | + | chr7_1:70918536-70918555 | None:intergenic | 30.0% |
| CATACATCTTTGACCAATGT+TGG | + | chr7_1:70916174-70916193 | None:intergenic | 35.0% | |
| CAACATTGGTCAAAGATGTA+TGG | - | chr7_1:70916172-70916191 | Msa1035180:CDS | 35.0% | |
| CAAAGATGTATGGAACTCAA+TGG | - | chr7_1:70916182-70916201 | Msa1035180:CDS | 35.0% | |
| AACAACCTAGTTAAGGTTGT+TGG | - | chr7_1:70916223-70916242 | Msa1035180:CDS | 35.0% | |
| ACAACCTAGTTAAGGTTGTT+GGG | - | chr7_1:70916224-70916243 | Msa1035180:CDS | 35.0% | |
| TGTGTTCTGATCCAACAATT+TGG | + | chr7_1:70916255-70916274 | None:intergenic | 35.0% | |
| ! | CAAACATCTCATGATGGTTT+TGG | - | chr7_1:70916334-70916353 | Msa1035180:intron | 35.0% |
| !! | ATGAGATTGAAGTTTCTGGT+TGG | - | chr7_1:70916422-70916441 | Msa1035180:CDS | 35.0% |
| TGTAAAATTCTCTCCTCCAT+AGG | + | chr7_1:70916500-70916519 | None:intergenic | 35.0% | |
| AGATTCATCAACAGAGTACA+AGG | + | chr7_1:70916542-70916561 | None:intergenic | 35.0% | |
| !!! | CATCATGTTTTTTCGGAAAG+TGG | + | chr7_1:70916648-70916667 | None:intergenic | 35.0% |
| TTGTGAATGGTGAATTGTGT+TGG | - | chr7_1:70916976-70916995 | Msa1035180:intron | 35.0% | |
| TGTGAATGGTGAATTGTGTT+GGG | - | chr7_1:70916977-70916996 | Msa1035180:intron | 35.0% | |
| TTGTGATATGGGGAATAAGA+AGG | - | chr7_1:70917004-70917023 | Msa1035180:intron | 35.0% | |
| ! | ATTCTTTTAACGGAGTTGGA+TGG | - | chr7_1:70917195-70917214 | Msa1035180:CDS | 35.0% |
| AATCAATGGTGTCCAAGTTA+TGG | - | chr7_1:70917232-70917251 | Msa1035180:intron | 35.0% | |
| ATCAATGGTGTCCAAGTTAT+GGG | - | chr7_1:70917233-70917252 | Msa1035180:intron | 35.0% | |
| CAACTATAAGTCCCATAACT+TGG | + | chr7_1:70917247-70917266 | None:intergenic | 35.0% | |
| CAAGTTATGGGACTTATAGT+TGG | - | chr7_1:70917245-70917264 | Msa1035180:intron | 35.0% | |
| TTTAGGCAAAATACATCGTG+CGG | + | chr7_1:70917320-70917339 | None:intergenic | 35.0% | |
| ATTTCTCCAACTCGTCAATT+AGG | - | chr7_1:70917417-70917436 | Msa1035180:intron | 35.0% | |
| CAATATCCTAATTGACGAGT+TGG | + | chr7_1:70917426-70917445 | None:intergenic | 35.0% | |
| ATCCATGACTTACTATAGTC+AGG | - | chr7_1:70917493-70917512 | Msa1035180:intron | 35.0% | |
| AGAAGCAGAATTGTTAGAAG+TGG | + | chr7_1:70917569-70917588 | None:intergenic | 35.0% | |
| CTTCTAACAATTCTGCTTCT+AGG | - | chr7_1:70917569-70917588 | Msa1035180:intron | 35.0% | |
| ATGATAATCGTTGATCACCT+TGG | - | chr7_1:70917649-70917668 | Msa1035180:intron | 35.0% | |
| TCATGTTAAAAGCCATTTGC+AGG | - | chr7_1:70917811-70917830 | Msa1035180:intron | 35.0% | |
| ACACTGCTTACTTATTAAGG+AGG | - | chr7_1:70918013-70918032 | Msa1035180:CDS | 35.0% | |
| TTATCTTTCAGAAAGACCTG+AGG | - | chr7_1:70918064-70918083 | Msa1035180:CDS | 35.0% | |
| ! | GTGATTCCTCAATTTGCTTA+AGG | + | chr7_1:70918261-70918280 | None:intergenic | 35.0% |
| AAGTATTTCGCAACAGTTAG+AGG | - | chr7_1:70918306-70918325 | Msa1035180:CDS | 35.0% | |
| GTTGTAAGGATATACGACTT+TGG | + | chr7_1:70918404-70918423 | None:intergenic | 35.0% | |
| ! | AATTTTGGACACAACGAGAA+AGG | - | chr7_1:70918541-70918560 | Msa1035180:CDS | 35.0% |
| CATACATCTTTGACCAATGT+TGG | + | chr7_1:70916174-70916193 | None:intergenic | 35.0% | |
| CAACATTGGTCAAAGATGTA+TGG | - | chr7_1:70916172-70916191 | Msa1035180:CDS | 35.0% | |
| CAAAGATGTATGGAACTCAA+TGG | - | chr7_1:70916182-70916201 | Msa1035180:CDS | 35.0% | |
| AACAACCTAGTTAAGGTTGT+TGG | - | chr7_1:70916223-70916242 | Msa1035180:CDS | 35.0% | |
| ACAACCTAGTTAAGGTTGTT+GGG | - | chr7_1:70916224-70916243 | Msa1035180:CDS | 35.0% | |
| TGTGTTCTGATCCAACAATT+TGG | + | chr7_1:70916255-70916274 | None:intergenic | 35.0% | |
| ! | CAAACATCTCATGATGGTTT+TGG | - | chr7_1:70916334-70916353 | Msa1035180:intron | 35.0% |
| !! | ATGAGATTGAAGTTTCTGGT+TGG | - | chr7_1:70916422-70916441 | Msa1035180:CDS | 35.0% |
| TGTAAAATTCTCTCCTCCAT+AGG | + | chr7_1:70916500-70916519 | None:intergenic | 35.0% | |
| AGATTCATCAACAGAGTACA+AGG | + | chr7_1:70916542-70916561 | None:intergenic | 35.0% | |
| !!! | CATCATGTTTTTTCGGAAAG+TGG | + | chr7_1:70916648-70916667 | None:intergenic | 35.0% |
| TTGTGAATGGTGAATTGTGT+TGG | - | chr7_1:70916976-70916995 | Msa1035180:intron | 35.0% | |
| TGTGAATGGTGAATTGTGTT+GGG | - | chr7_1:70916977-70916996 | Msa1035180:intron | 35.0% | |
| TTGTGATATGGGGAATAAGA+AGG | - | chr7_1:70917004-70917023 | Msa1035180:intron | 35.0% | |
| ! | ATTCTTTTAACGGAGTTGGA+TGG | - | chr7_1:70917195-70917214 | Msa1035180:CDS | 35.0% |
| AATCAATGGTGTCCAAGTTA+TGG | - | chr7_1:70917232-70917251 | Msa1035180:intron | 35.0% | |
| ATCAATGGTGTCCAAGTTAT+GGG | - | chr7_1:70917233-70917252 | Msa1035180:intron | 35.0% | |
| CAACTATAAGTCCCATAACT+TGG | + | chr7_1:70917247-70917266 | None:intergenic | 35.0% | |
| CAAGTTATGGGACTTATAGT+TGG | - | chr7_1:70917245-70917264 | Msa1035180:intron | 35.0% | |
| TTTAGGCAAAATACATCGTG+CGG | + | chr7_1:70917320-70917339 | None:intergenic | 35.0% | |
| ATTTCTCCAACTCGTCAATT+AGG | - | chr7_1:70917417-70917436 | Msa1035180:intron | 35.0% | |
| CAATATCCTAATTGACGAGT+TGG | + | chr7_1:70917426-70917445 | None:intergenic | 35.0% | |
| ATCCATGACTTACTATAGTC+AGG | - | chr7_1:70917493-70917512 | Msa1035180:intron | 35.0% | |
| AGAAGCAGAATTGTTAGAAG+TGG | + | chr7_1:70917569-70917588 | None:intergenic | 35.0% | |
| CTTCTAACAATTCTGCTTCT+AGG | - | chr7_1:70917569-70917588 | Msa1035180:intron | 35.0% | |
| ATGATAATCGTTGATCACCT+TGG | - | chr7_1:70917649-70917668 | Msa1035180:intron | 35.0% | |
| TCATGTTAAAAGCCATTTGC+AGG | - | chr7_1:70917811-70917830 | Msa1035180:intron | 35.0% | |
| ACACTGCTTACTTATTAAGG+AGG | - | chr7_1:70918013-70918032 | Msa1035180:CDS | 35.0% | |
| TTATCTTTCAGAAAGACCTG+AGG | - | chr7_1:70918064-70918083 | Msa1035180:CDS | 35.0% | |
| ! | GTGATTCCTCAATTTGCTTA+AGG | + | chr7_1:70918261-70918280 | None:intergenic | 35.0% |
| AAGTATTTCGCAACAGTTAG+AGG | - | chr7_1:70918306-70918325 | Msa1035180:CDS | 35.0% | |
| GTTGTAAGGATATACGACTT+TGG | + | chr7_1:70918404-70918423 | None:intergenic | 35.0% | |
| ! | AATTTTGGACACAACGAGAA+AGG | - | chr7_1:70918541-70918560 | Msa1035180:CDS | 35.0% |
| ACTCAATGGGAATCCTACAT+AGG | - | chr7_1:70916196-70916215 | Msa1035180:CDS | 40.0% | |
| GTAGTGACAATGTTGTTGCA+GGG | + | chr7_1:70916301-70916320 | None:intergenic | 40.0% | |
| TGTAGTGACAATGTTGTTGC+AGG | + | chr7_1:70916302-70916321 | None:intergenic | 40.0% | |
| CAAGGTCAAACATCTCATGA+TGG | - | chr7_1:70916328-70916347 | Msa1035180:intron | 40.0% | |
| GAGGATGAGATTGAAGTTTC+TGG | - | chr7_1:70916418-70916437 | Msa1035180:CDS | 40.0% | |
| ATTGGAGGGTCTGTTATCTT+TGG | + | chr7_1:70916463-70916482 | None:intergenic | 40.0% | |
| ! | CTTGACAATTCAGCATTGGA+GGG | + | chr7_1:70916477-70916496 | None:intergenic | 40.0% |
| TAGGCTTGACAATTCAGCAT+TGG | + | chr7_1:70916481-70916500 | None:intergenic | 40.0% | |
| ATGCTGAATTGTCAAGCCTA+TGG | - | chr7_1:70916481-70916500 | Msa1035180:intron | 40.0% | |
| TGTTGGGCTGATTGTGATAT+GGG | - | chr7_1:70916993-70917012 | Msa1035180:intron | 40.0% | |
| GGACAATAATGAATTGCGGA+GGG | - | chr7_1:70917115-70917134 | Msa1035180:CDS | 40.0% | |
| ATAATGAATTGCGGAGGGTA+AGG | - | chr7_1:70917120-70917139 | Msa1035180:CDS | 40.0% | |
| TAATGAATTGCGGAGGGTAA+GGG | - | chr7_1:70917121-70917140 | Msa1035180:CDS | 40.0% | |
| ! | AGCGCTATTACGTCGATTAA+AGG | - | chr7_1:70917293-70917312 | Msa1035180:intron | 40.0% |
| ! | GCGCTATTACGTCGATTAAA+GGG | - | chr7_1:70917294-70917313 | Msa1035180:intron | 40.0% |
| ! | TTTTGCACATGCGTGACTTT+AGG | + | chr7_1:70917337-70917356 | None:intergenic | 40.0% |
| ! | GACGAGTTGGAGAAATTGTT+AGG | + | chr7_1:70917413-70917432 | None:intergenic | 40.0% |
| AGCCTGACTATAGTAAGTCA+TGG | + | chr7_1:70917498-70917517 | None:intergenic | 40.0% | |
| AAGCAGACTCCTCAACTTAA+TGG | - | chr7_1:70917535-70917554 | Msa1035180:intron | 40.0% | |
| ! | GCACACATTCCATTAAGTTG+AGG | + | chr7_1:70917547-70917566 | None:intergenic | 40.0% |
| AAGAAGAGTAAGATGGACAG+AGG | - | chr7_1:70917609-70917628 | Msa1035180:intron | 40.0% | |
| ATAATCGTTGATCACCTTGG+TGG | - | chr7_1:70917652-70917671 | Msa1035180:intron | 40.0% | |
| TGTAGATCGACATTTCTGCA+CGG | + | chr7_1:70917936-70917955 | None:intergenic | 40.0% | |
| ! | TCAATTTGCTTAAGGCTGCT+AGG | + | chr7_1:70918253-70918272 | None:intergenic | 40.0% |
| TAGCAGCCTTAAGCAAATTG+AGG | - | chr7_1:70918252-70918271 | Msa1035180:CDS | 40.0% | |
| GCAACTTTCTTTGCGTCTAA+AGG | + | chr7_1:70918455-70918474 | None:intergenic | 40.0% | |
| ACTCAATGGGAATCCTACAT+AGG | - | chr7_1:70916196-70916215 | Msa1035180:CDS | 40.0% | |
| GTAGTGACAATGTTGTTGCA+GGG | + | chr7_1:70916301-70916320 | None:intergenic | 40.0% | |
| TGTAGTGACAATGTTGTTGC+AGG | + | chr7_1:70916302-70916321 | None:intergenic | 40.0% | |
| CAAGGTCAAACATCTCATGA+TGG | - | chr7_1:70916328-70916347 | Msa1035180:intron | 40.0% | |
| GAGGATGAGATTGAAGTTTC+TGG | - | chr7_1:70916418-70916437 | Msa1035180:CDS | 40.0% | |
| ATTGGAGGGTCTGTTATCTT+TGG | + | chr7_1:70916463-70916482 | None:intergenic | 40.0% | |
| ! | CTTGACAATTCAGCATTGGA+GGG | + | chr7_1:70916477-70916496 | None:intergenic | 40.0% |
| TAGGCTTGACAATTCAGCAT+TGG | + | chr7_1:70916481-70916500 | None:intergenic | 40.0% | |
| ATGCTGAATTGTCAAGCCTA+TGG | - | chr7_1:70916481-70916500 | Msa1035180:intron | 40.0% | |
| TGTTGGGCTGATTGTGATAT+GGG | - | chr7_1:70916993-70917012 | Msa1035180:intron | 40.0% | |
| GGACAATAATGAATTGCGGA+GGG | - | chr7_1:70917115-70917134 | Msa1035180:CDS | 40.0% | |
| ATAATGAATTGCGGAGGGTA+AGG | - | chr7_1:70917120-70917139 | Msa1035180:CDS | 40.0% | |
| TAATGAATTGCGGAGGGTAA+GGG | - | chr7_1:70917121-70917140 | Msa1035180:CDS | 40.0% | |
| ! | AGCGCTATTACGTCGATTAA+AGG | - | chr7_1:70917293-70917312 | Msa1035180:intron | 40.0% |
| ! | GCGCTATTACGTCGATTAAA+GGG | - | chr7_1:70917294-70917313 | Msa1035180:intron | 40.0% |
| ! | TTTTGCACATGCGTGACTTT+AGG | + | chr7_1:70917337-70917356 | None:intergenic | 40.0% |
| ! | GACGAGTTGGAGAAATTGTT+AGG | + | chr7_1:70917413-70917432 | None:intergenic | 40.0% |
| AGCCTGACTATAGTAAGTCA+TGG | + | chr7_1:70917498-70917517 | None:intergenic | 40.0% | |
| AAGCAGACTCCTCAACTTAA+TGG | - | chr7_1:70917535-70917554 | Msa1035180:intron | 40.0% | |
| ! | GCACACATTCCATTAAGTTG+AGG | + | chr7_1:70917547-70917566 | None:intergenic | 40.0% |
| AAGAAGAGTAAGATGGACAG+AGG | - | chr7_1:70917609-70917628 | Msa1035180:intron | 40.0% | |
| ATAATCGTTGATCACCTTGG+TGG | - | chr7_1:70917652-70917671 | Msa1035180:intron | 40.0% | |
| TGTAGATCGACATTTCTGCA+CGG | + | chr7_1:70917936-70917955 | None:intergenic | 40.0% | |
| ! | TCAATTTGCTTAAGGCTGCT+AGG | + | chr7_1:70918253-70918272 | None:intergenic | 40.0% |
| TAGCAGCCTTAAGCAAATTG+AGG | - | chr7_1:70918252-70918271 | Msa1035180:CDS | 40.0% | |
| GCAACTTTCTTTGCGTCTAA+AGG | + | chr7_1:70918455-70918474 | None:intergenic | 40.0% | |
| CTGACCCAACAACCTTAACT+AGG | + | chr7_1:70916231-70916250 | None:intergenic | 45.0% | |
| GTTGGGTCAGACCAAATTGT+TGG | - | chr7_1:70916241-70916260 | Msa1035180:CDS | 45.0% | |
| TTGTTGCAGGGTGACTTGAT+TGG | + | chr7_1:70916289-70916308 | None:intergenic | 45.0% | |
| ! | GCTTGACAATTCAGCATTGG+AGG | + | chr7_1:70916478-70916497 | None:intergenic | 45.0% |
| CTGAATTGTCAAGCCTATGG+AGG | - | chr7_1:70916484-70916503 | Msa1035180:intron | 45.0% | |
| CAAGGAGTTTGTGAACTGAG+AGG | + | chr7_1:70916524-70916543 | None:intergenic | 45.0% | |
| TTCAAGGGGCTTCTCATCAA+TGG | + | chr7_1:70916692-70916711 | None:intergenic | 45.0% | |
| GTGTTGGGCTGATTGTGATA+TGG | - | chr7_1:70916992-70917011 | Msa1035180:intron | 45.0% | |
| GTTGGGCTGATTGTGATATG+GGG | - | chr7_1:70916994-70917013 | Msa1035180:intron | 45.0% | |
| GGGACAATAATGAATTGCGG+AGG | - | chr7_1:70917114-70917133 | Msa1035180:CDS | 45.0% | |
| ACTTACTTTCTGGACCACCA+AGG | + | chr7_1:70917669-70917688 | None:intergenic | 45.0% | |
| AATTGCAGAGGCAAAGCCTA+AGG | - | chr7_1:70917748-70917767 | Msa1035180:intron | 45.0% | |
| TTCTGTGAAGCCTCATTTGC+CGG | - | chr7_1:70917878-70917897 | Msa1035180:intron | 45.0% | |
| GAGTCAATTACCGGCAAATG+AGG | + | chr7_1:70917891-70917910 | None:intergenic | 45.0% | |
| ACGCATGCATAAAGCTTTGC+AGG | - | chr7_1:70917958-70917977 | Msa1035180:intron | 45.0% | |
| CGCATGCATAAAGCTTTGCA+GGG | - | chr7_1:70917959-70917978 | Msa1035180:intron | 45.0% | |
| CTTTCAGAAAGACCTGAGGA+AGG | - | chr7_1:70918068-70918087 | Msa1035180:CDS | 45.0% | |
| TCTGTTCTATGTCCTTCCTC+AGG | + | chr7_1:70918083-70918102 | None:intergenic | 45.0% | |
| GCTTAAGGCTGCTAGGAAAT+AGG | + | chr7_1:70918246-70918265 | None:intergenic | 45.0% | |
| CTGACCCAACAACCTTAACT+AGG | + | chr7_1:70916231-70916250 | None:intergenic | 45.0% | |
| GTTGGGTCAGACCAAATTGT+TGG | - | chr7_1:70916241-70916260 | Msa1035180:CDS | 45.0% | |
| TTGTTGCAGGGTGACTTGAT+TGG | + | chr7_1:70916289-70916308 | None:intergenic | 45.0% | |
| ! | GCTTGACAATTCAGCATTGG+AGG | + | chr7_1:70916478-70916497 | None:intergenic | 45.0% |
| CTGAATTGTCAAGCCTATGG+AGG | - | chr7_1:70916484-70916503 | Msa1035180:intron | 45.0% | |
| CAAGGAGTTTGTGAACTGAG+AGG | + | chr7_1:70916524-70916543 | None:intergenic | 45.0% | |
| TTCAAGGGGCTTCTCATCAA+TGG | + | chr7_1:70916692-70916711 | None:intergenic | 45.0% | |
| GTGTTGGGCTGATTGTGATA+TGG | - | chr7_1:70916992-70917011 | Msa1035180:intron | 45.0% | |
| GTTGGGCTGATTGTGATATG+GGG | - | chr7_1:70916994-70917013 | Msa1035180:intron | 45.0% | |
| GGGACAATAATGAATTGCGG+AGG | - | chr7_1:70917114-70917133 | Msa1035180:CDS | 45.0% | |
| ACTTACTTTCTGGACCACCA+AGG | + | chr7_1:70917669-70917688 | None:intergenic | 45.0% | |
| AATTGCAGAGGCAAAGCCTA+AGG | - | chr7_1:70917748-70917767 | Msa1035180:intron | 45.0% | |
| TTCTGTGAAGCCTCATTTGC+CGG | - | chr7_1:70917878-70917897 | Msa1035180:intron | 45.0% | |
| GAGTCAATTACCGGCAAATG+AGG | + | chr7_1:70917891-70917910 | None:intergenic | 45.0% | |
| ACGCATGCATAAAGCTTTGC+AGG | - | chr7_1:70917958-70917977 | Msa1035180:intron | 45.0% | |
| CGCATGCATAAAGCTTTGCA+GGG | - | chr7_1:70917959-70917978 | Msa1035180:intron | 45.0% | |
| CTTTCAGAAAGACCTGAGGA+AGG | - | chr7_1:70918068-70918087 | Msa1035180:CDS | 45.0% | |
| TCTGTTCTATGTCCTTCCTC+AGG | + | chr7_1:70918083-70918102 | None:intergenic | 45.0% | |
| GCTTAAGGCTGCTAGGAAAT+AGG | + | chr7_1:70918246-70918265 | None:intergenic | 45.0% | |
| ATCACGGCAGTTGCATCTAG+AGG | - | chr7_1:70918276-70918295 | Msa1035180:CDS | 50.0% | |
| ATCACGGCAGTTGCATCTAG+AGG | - | chr7_1:70918276-70918295 | Msa1035180:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 70916166 | 70918578 | 70916166 | ID=Msa1035180;Name=Msa1035180 |
| chr7_1 | mRNA | 70916166 | 70918578 | 70916166 | ID=Msa1035180-mRNA-1;Parent=Msa1035180;Name=Msa1035180-mRNA-1;_AED=0.05;_eAED=0.06;_QI=0|0|0|1|1|1|7|0|366 |
| chr7_1 | exon | 70918012 | 70918578 | 70918012 | ID=Msa1035180-mRNA-1:exon:17079;Parent=Msa1035180-mRNA-1 |
| chr7_1 | exon | 70917062 | 70917233 | 70917062 | ID=Msa1035180-mRNA-1:exon:17078;Parent=Msa1035180-mRNA-1 |
| chr7_1 | exon | 70916912 | 70916988 | 70916912 | ID=Msa1035180-mRNA-1:exon:17077;Parent=Msa1035180-mRNA-1 |
| chr7_1 | exon | 70916764 | 70916803 | 70916764 | ID=Msa1035180-mRNA-1:exon:17076;Parent=Msa1035180-mRNA-1 |
| chr7_1 | exon | 70916615 | 70916669 | 70916615 | ID=Msa1035180-mRNA-1:exon:17075;Parent=Msa1035180-mRNA-1 |
| chr7_1 | exon | 70916417 | 70916486 | 70916417 | ID=Msa1035180-mRNA-1:exon:17074;Parent=Msa1035180-mRNA-1 |
| chr7_1 | exon | 70916166 | 70916285 | 70916166 | ID=Msa1035180-mRNA-1:exon:17073;Parent=Msa1035180-mRNA-1 |
| chr7_1 | CDS | 70918012 | 70918578 | 70918012 | ID=Msa1035180-mRNA-1:cds;Parent=Msa1035180-mRNA-1 |
| chr7_1 | CDS | 70917062 | 70917233 | 70917062 | ID=Msa1035180-mRNA-1:cds;Parent=Msa1035180-mRNA-1 |
| chr7_1 | CDS | 70916912 | 70916988 | 70916912 | ID=Msa1035180-mRNA-1:cds;Parent=Msa1035180-mRNA-1 |
| chr7_1 | CDS | 70916764 | 70916803 | 70916764 | ID=Msa1035180-mRNA-1:cds;Parent=Msa1035180-mRNA-1 |
| chr7_1 | CDS | 70916615 | 70916669 | 70916615 | ID=Msa1035180-mRNA-1:cds;Parent=Msa1035180-mRNA-1 |
| chr7_1 | CDS | 70916417 | 70916486 | 70916417 | ID=Msa1035180-mRNA-1:cds;Parent=Msa1035180-mRNA-1 |
| chr7_1 | CDS | 70916166 | 70916285 | 70916166 | ID=Msa1035180-mRNA-1:cds;Parent=Msa1035180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
