Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035520 | AES81523.1 | 67.725 | 189 | 30 | 4 | 98 | 283 | 1 | 161 | 1.90e-67 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035520 | G7KWB3 | 52.778 | 72 | 21 | 2 | 42 | 100 | 78 | 149 | 7.17e-11 | 70.1 |
| Msa1035520 | G7KWB3 | 67.725 | 189 | 30 | 4 | 98 | 283 | 1 | 161 | 9.10e-68 | 217 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1035520 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035520 | MtrunA17_Chr7g0258981 | 67.725 | 189 | 30 | 4 | 98 | 283 | 1 | 161 | 1.75e-71 | 217 |
| Msa1035520 | MtrunA17_Chr7g0258981 | 52.778 | 72 | 21 | 2 | 42 | 100 | 78 | 149 | 1.38e-14 | 70.1 |
| Msa1035520 | MtrunA17_Chr3g0080591 | 48.980 | 98 | 36 | 4 | 1 | 87 | 1 | 95 | 2.74e-17 | 76.6 |
| Msa1035520 | MtrunA17_Chr3g0080591 | 40.769 | 130 | 49 | 4 | 168 | 272 | 8 | 134 | 8.01e-16 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 71 sgRNAs with CRISPR-Local
Find 424 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATAATATTGATGGATCTT+TGG | 0.189029 | 7_1:+71327321 | Msa1035520:CDS |
| AATAATATTGATGGATCTTT+GGG | 0.232329 | 7_1:+71327322 | Msa1035520:CDS |
| AAACTGCACAAGATCTTTCT+TGG | 0.245892 | 7_1:+71327041 | Msa1035520:CDS |
| CGACCTTGATTTGAAGCTTT+AGG | 0.290526 | 7_1:+71327444 | Msa1035520:CDS |
| ACACAATTTGCAACATAAAT+CGG | 0.316739 | 7_1:+71327077 | Msa1035520:CDS |
| TGTGAAAATTGTGGTGTTGC+TGG | 0.325919 | 7_1:-71320124 | None:intergenic |
| CATGATTACAATAATATTGA+TGG | 0.344856 | 7_1:+71327313 | Msa1035520:CDS |
| CACACTATGTTTCCCATGTA+TGG | 0.373196 | 7_1:+71320196 | Msa1035520:CDS |
| TGTAAATCTTGTGATGTTGT+TGG | 0.389716 | 7_1:-71327142 | None:intergenic |
| CACAATTTGCAACATAAATC+GGG | 0.419218 | 7_1:+71327078 | Msa1035520:CDS |
| ACCGCTGGTACTTCTTCAAT+TGG | 0.421292 | 7_1:-71327394 | None:intergenic |
| TGTGATGAAGGTGGTGGAGA+TGG | 0.423532 | 7_1:-71327193 | None:intergenic |
| ACAATTGGAACCTCTGGTAT+AGG | 0.433089 | 7_1:-71327277 | None:intergenic |
| TGCAAATTGTGTATGAGCTT+TGG | 0.452975 | 7_1:-71327066 | None:intergenic |
| CAACCTAAAGCTTCAAATCA+AGG | 0.460309 | 7_1:-71327447 | None:intergenic |
| GCAGGGAACATTGGAATCTC+TGG | 0.469010 | 7_1:-71320265 | None:intergenic |
| TGCTCCAATGGAGGAACGAC+TGG | 0.478203 | 7_1:+71320369 | Msa1035520:CDS |
| AACATTGGAATCTCTGGTAT+AGG | 0.479643 | 7_1:-71320259 | None:intergenic |
| TGACGAGTACGAGAGACAAT+TGG | 0.479925 | 7_1:-71327292 | None:intergenic |
| ATAATTACCACGTCCATACA+TGG | 0.482884 | 7_1:-71320209 | None:intergenic |
| TGAGATGAAGGTGGTGGTAG+TGG | 0.484354 | 7_1:-71320175 | None:intergenic |
| TTGAAGAAGTACCAGCGGTC+TGG | 0.485006 | 7_1:+71327398 | Msa1035520:CDS |
| CGAGAGACAATTGGAACCTC+TGG | 0.486624 | 7_1:-71327283 | None:intergenic |
| ACCACCAGTCGTTCCTCCAT+TGG | 0.488135 | 7_1:-71320373 | None:intergenic |
| TCTTTCTTTGATTGACAAGC+CGG | 0.490146 | 7_1:+71320339 | Msa1035520:CDS |
| TCAATTGGAGCAGAATCAAT+CGG | 0.499372 | 7_1:-71327379 | None:intergenic |
| GCCGGCTGATCTTGCTCCAA+TGG | 0.502269 | 7_1:+71320357 | Msa1035520:CDS |
| TCCATTGGAGCAAGATCAGC+CGG | 0.503676 | 7_1:-71320358 | None:intergenic |
| ACCATGTTGTTTCCTATGCA+TGG | 0.506943 | 7_1:+71327217 | Msa1035520:CDS |
| TCTGGTATAGGCCTCATGTA+TGG | 0.510085 | 7_1:-71320247 | None:intergenic |
| AACCTCTGGTATAGGCCTCA+TGG | 0.524083 | 7_1:-71327269 | None:intergenic |
| GTTGGTATGAATGTTTGTGA+TGG | 0.529752 | 7_1:-71327124 | None:intergenic |
| CGACTGGTGGTGTTGAGTGA+TGG | 0.544769 | 7_1:+71320385 | Msa1035520:CDS |
| AGATCTTCTTTGTACCACAT+TGG | 0.545928 | 7_1:+71327166 | Msa1035520:CDS |
| AGAAGTACCAGCGGTCTGGC+GGG | 0.549805 | 7_1:+71327402 | Msa1035520:CDS |
| AACAACATGGTGTGTGATGA+AGG | 0.556950 | 7_1:-71327205 | None:intergenic |
| TAAAGACGAGCAGGGAACAT+TGG | 0.564047 | 7_1:-71320274 | None:intergenic |
| AAGAAGTACCAGCGGTCTGG+CGG | 0.565413 | 7_1:+71327401 | Msa1035520:CDS |
| TGAATCTTTAGGAGGAGCAA+TGG | 0.567363 | 7_1:+71320312 | Msa1035520:intron |
| TGGTTGCATCGAAATTCGAT+TGG | 0.568245 | 7_1:-71327001 | None:intergenic |
| TGGATCTTTGGGGAGAACAA+TGG | 0.571321 | 7_1:+71327333 | Msa1035520:CDS |
| TTGTTTCCTATGCATGGAAG+TGG | 0.582090 | 7_1:+71327223 | Msa1035520:CDS |
| TAGGCCTCATGGATGGATGA+AGG | 0.586352 | 7_1:-71327258 | None:intergenic |
| GGAAACATAGTGTGAGATGA+AGG | 0.586864 | 7_1:-71320187 | None:intergenic |
| TAATTACCACTTCCATGCAT+AGG | 0.590506 | 7_1:-71327229 | None:intergenic |
| AAAACTCTTTGTGAAAATTG+TGG | 0.591357 | 7_1:-71320133 | None:intergenic |
| GTTAGAGTAAGAACAAGAGT+AGG | 0.594186 | 7_1:-71326977 | None:intergenic |
| GATGAAGGTGGTGGAGATGG+TGG | 0.599841 | 7_1:-71327190 | None:intergenic |
| TCTGGTATAGGCCTCATGGA+TGG | 0.600026 | 7_1:-71327265 | None:intergenic |
| GATGAAGGTGGTGGTAGTGG+TGG | 0.600039 | 7_1:-71320172 | None:intergenic |
| GGTGGTATGAATGTTGTCAA+TGG | 0.600830 | 7_1:-71320103 | None:intergenic |
| GGCTGATCTTGCTCCAATGG+AGG | 0.602414 | 7_1:+71320360 | Msa1035520:CDS |
| GAAAATTGTGGTGTTGCTGG+TGG | 0.610901 | 7_1:-71320121 | None:intergenic |
| TCATGTATGGACGAAAGCGA+CGG | 0.619121 | 7_1:-71320234 | None:intergenic |
| GTGGAGATGGTGGTCCAATG+TGG | 0.620516 | 7_1:-71327180 | None:intergenic |
| GTCGCTTTCGTCCATACATG+AGG | 0.623718 | 7_1:+71320236 | Msa1035520:CDS |
| ATCCATGAGGCCTATACCAG+AGG | 0.624967 | 7_1:+71327267 | Msa1035520:CDS |
| ATGTTTCCCATGTATGGACG+TGG | 0.637434 | 7_1:+71320202 | Msa1035520:CDS |
| TAATTACCACGTCCATACAT+GGG | 0.646341 | 7_1:-71320208 | None:intergenic |
| ATAGTGTGAGATGAAGGTGG+TGG | 0.665632 | 7_1:-71320181 | None:intergenic |
| TCCAATGGAGGAACGACTGG+TGG | 0.666252 | 7_1:+71320372 | Msa1035520:CDS |
| TCCAATTGAAGAAGTACCAG+CGG | 0.672889 | 7_1:+71327393 | Msa1035520:CDS |
| ATAATATTGATGGATCTTTG+GGG | 0.673989 | 7_1:+71327323 | Msa1035520:CDS |
| GTGGTAGTGGTGGTCCATTG+CGG | 0.679358 | 7_1:-71320162 | None:intergenic |
| ATGGTGTGTGATGAAGGTGG+TGG | 0.684137 | 7_1:-71327199 | None:intergenic |
| AACATAGTGTGAGATGAAGG+TGG | 0.688373 | 7_1:-71320184 | None:intergenic |
| GCCTCATGGATGGATGAAGG+TGG | 0.701559 | 7_1:-71327255 | None:intergenic |
| TGTTATGGTAAAGACGAGCA+GGG | 0.710306 | 7_1:-71320282 | None:intergenic |
| ACCACCTTCATCCATCCATG+AGG | 0.719012 | 7_1:+71327254 | Msa1035520:CDS |
| TCCATGCATAGGAAACAACA+TGG | 0.729158 | 7_1:-71327218 | None:intergenic |
| AACATGGTGTGTGATGAAGG+TGG | 0.787924 | 7_1:-71327202 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | - | chr7_1:71321937-71321956 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr7_1:71321937-71321956 | Msa1035520:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr7_1:71321936-71321955 | Msa1035520:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr7_1:71321937-71321956 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr7_1:71321936-71321955 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr7_1:71321936-71321955 | Msa1035520:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr7_1:71321937-71321956 | Msa1035520:intron | 0.0% |
| !!! | TTTTTTGCTAATAAAATAAA+AGG | + | chr7_1:71321067-71321086 | Msa1035520:intron | 10.0% |
| !!! | ATTATATTTCATTTTTTTGA+AGG | + | chr7_1:71321560-71321579 | Msa1035520:intron | 10.0% |
| !!! | TTATATTTCATTTTTTTGAA+GGG | + | chr7_1:71321561-71321580 | Msa1035520:intron | 10.0% |
| !! | TTAATTAGAATATAAACAAA+AGG | + | chr7_1:71321835-71321854 | Msa1035520:intron | 10.0% |
| !! | TAATTAGAATATAAACAAAA+GGG | + | chr7_1:71321836-71321855 | Msa1035520:intron | 10.0% |
| !! | ATATATATATATATATATGG+GGG | + | chr7_1:71321960-71321979 | Msa1035520:intron | 10.0% |
| !! | TATATATATATATATATAGG+GGG | - | chr7_1:71322260-71322279 | None:intergenic | 10.0% |
| !!! | ATTTTTTAGCTTAATTTTAT+AGG | + | chr7_1:71322645-71322664 | Msa1035520:intron | 10.0% |
| !!! | ATATTTACTAACTTTTTTTA+AGG | + | chr7_1:71323538-71323557 | Msa1035520:intron | 10.0% |
| !!! | TAAAATTAACTATTTTTTAG+GGG | - | chr7_1:71325532-71325551 | None:intergenic | 10.0% |
| !!! | CTAAAATTAACTATTTTTTA+GGG | - | chr7_1:71325533-71325552 | None:intergenic | 10.0% |
| !!! | ACTAAAATTAACTATTTTTT+AGG | - | chr7_1:71325534-71325553 | None:intergenic | 10.0% |
| !! | TATCAAAATACAAATTTAAA+AGG | + | chr7_1:71326491-71326510 | Msa1035520:intron | 10.0% |
| !! | ATATATATAGGAATTAATTA+GGG | - | chr7_1:71326710-71326729 | None:intergenic | 10.0% |
| !! | TATATATATAGGAATTAATT+AGG | - | chr7_1:71326711-71326730 | None:intergenic | 10.0% |
| !!! | TTCCTATATATATATTTTTT+TGG | + | chr7_1:71326717-71326736 | Msa1035520:intron | 10.0% |
| !! | AACCAAAAAAATATATATAT+AGG | - | chr7_1:71326722-71326741 | None:intergenic | 10.0% |
| !!! | ATGGTTTTATAATTATGTAA+TGG | + | chr7_1:71320492-71320511 | Msa1035520:intron | 15.0% |
| !!! | TGGTTTTATAATTATGTAAT+GGG | + | chr7_1:71320493-71320512 | Msa1035520:intron | 15.0% |
| !!! | TTTTTGTTTTGATTTTCATT+AGG | + | chr7_1:71320552-71320571 | Msa1035520:intron | 15.0% |
| !!! | TTTTGTTTTGATTTTCATTA+GGG | + | chr7_1:71320553-71320572 | Msa1035520:intron | 15.0% |
| !!! | ATTAATGAAATGTTTTATTC+TGG | + | chr7_1:71320716-71320735 | Msa1035520:intron | 15.0% |
| !!! | TTAATGAAATGTTTTATTCT+GGG | + | chr7_1:71320717-71320736 | Msa1035520:intron | 15.0% |
| !!! | TCATAAAAACTTATTTGTTT+TGG | - | chr7_1:71321139-71321158 | None:intergenic | 15.0% |
| !! | TAGACAAAATTAATATTTGA+AGG | + | chr7_1:71321207-71321226 | Msa1035520:intron | 15.0% |
| !!! | ATTTTGCTTATAATAGTAAT+CGG | - | chr7_1:71321294-71321313 | None:intergenic | 15.0% |
| !!! | TATATGACTTGTTTATTTTA+CGG | + | chr7_1:71321444-71321463 | Msa1035520:intron | 15.0% |
| !! | CATTTCTATAAGTATTATTA+AGG | + | chr7_1:71321649-71321668 | Msa1035520:intron | 15.0% |
| !!! | AATTTTAAGGAAACAATATT+TGG | - | chr7_1:71321719-71321738 | None:intergenic | 15.0% |
| !!! | GTAATAAAGACAAAATTTTA+AGG | - | chr7_1:71321732-71321751 | None:intergenic | 15.0% |
| !!! | TGTTTTAGTAAATTATAAGT+GGG | + | chr7_1:71321859-71321878 | Msa1035520:intron | 15.0% |
| !! | AAAGTTTAATATAGACAAAA+GGG | - | chr7_1:71322061-71322080 | None:intergenic | 15.0% |
| !! | TAAAGTTTAATATAGACAAA+AGG | - | chr7_1:71322062-71322081 | None:intergenic | 15.0% |
| !! | TTGTTTATAATAGAAAAACA+TGG | + | chr7_1:71322124-71322143 | Msa1035520:intron | 15.0% |
| !! | TGTTTATAATAGAAAAACAT+GGG | + | chr7_1:71322125-71322144 | Msa1035520:intron | 15.0% |
| !! | GAAAAAAAAATAAAGAAAAG+AGG | + | chr7_1:71322700-71322719 | Msa1035520:intron | 15.0% |
| !!! | TTTTAGATGAATAATCAAAT+TGG | + | chr7_1:71323155-71323174 | Msa1035520:intron | 15.0% |
| !!! | ATCTCCTAATTTAATTTTTA+TGG | + | chr7_1:71323217-71323236 | Msa1035520:intron | 15.0% |
| !! | GTATCCATAAAAATTAAATT+AGG | - | chr7_1:71323224-71323243 | None:intergenic | 15.0% |
| !! | TTTATTATAAATTCCATGAT+TGG | + | chr7_1:71323605-71323624 | Msa1035520:intron | 15.0% |
| !!! | TTTTTTTGAAGAAATCAAAA+TGG | - | chr7_1:71323777-71323796 | None:intergenic | 15.0% |
| !! | TATATATATATATGCAAAGA+AGG | + | chr7_1:71324380-71324399 | Msa1035520:intron | 15.0% |
| !! | TATATATAATTCAATTCGTT+TGG | - | chr7_1:71324557-71324576 | None:intergenic | 15.0% |
| !! | AAAAAAATACAAAAAATGAC+CGG | - | chr7_1:71324799-71324818 | None:intergenic | 15.0% |
| !!! | TGAATTTAATTTAGTTGATA+GGG | - | chr7_1:71324911-71324930 | None:intergenic | 15.0% |
| !! | TATTATATTTGATGTATTGT+TGG | + | chr7_1:71325176-71325195 | Msa1035520:intron | 15.0% |
| !! | TTGAAAAAGATAAATATAGA+TGG | + | chr7_1:71325204-71325223 | Msa1035520:intron | 15.0% |
| !!! | TGGATTTTGATTAAAATTAT+AGG | - | chr7_1:71325259-71325278 | None:intergenic | 15.0% |
| !! | AAATATACTAGGAATTAATT+AGG | - | chr7_1:71325650-71325669 | None:intergenic | 15.0% |
| !!! | TTAATTCCTAGTATATTTTT+TGG | + | chr7_1:71325652-71325671 | Msa1035520:intron | 15.0% |
| !! | TTTAAACCAAAAAATATACT+AGG | - | chr7_1:71325661-71325680 | None:intergenic | 15.0% |
| !! | ATTGTAAAATTAGAAGAAAA+AGG | - | chr7_1:71325957-71325976 | None:intergenic | 15.0% |
| !!! | AATTGATTCAATTACAATTT+TGG | + | chr7_1:71326045-71326064 | Msa1035520:intron | 15.0% |
| !!! | AGTTTAGTTTTCAAAAATTA+CGG | - | chr7_1:71326102-71326121 | None:intergenic | 15.0% |
| !!! | AAAACTTGTTCAAAAAAATT+TGG | + | chr7_1:71326397-71326416 | Msa1035520:intron | 15.0% |
| !!! | ATATTTTAACTAGTAGAAAA+TGG | + | chr7_1:71326454-71326473 | Msa1035520:intron | 15.0% |
| !! | TATATATAGGAATTAATTAG+GGG | - | chr7_1:71326709-71326728 | None:intergenic | 15.0% |
| !!! | GGTTTTATAATTATGTAATG+GGG | + | chr7_1:71320494-71320513 | Msa1035520:intron | 20.0% |
| !! | CTAAATTAAACTCATTTAAG+AGG | - | chr7_1:71320811-71320830 | None:intergenic | 20.0% |
| !! | TTTCTTTGGCTAAATTAAAT+TGG | - | chr7_1:71320834-71320853 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTCTTCTTTTTCA+AGG | + | chr7_1:71320956-71320975 | Msa1035520:intron | 20.0% |
| !!! | TTTTTCTTCTTCTTTTTCAA+GGG | + | chr7_1:71320957-71320976 | Msa1035520:intron | 20.0% |
| !!! | TTAAGATGATACTTTTGATA+AGG | - | chr7_1:71321235-71321254 | None:intergenic | 20.0% |
| !!! | ATGAGTGTAAATAATTTTGT+AGG | - | chr7_1:71321632-71321651 | None:intergenic | 20.0% |
| !!! | TATGTCATTGTCTTTTTTTA+AGG | + | chr7_1:71321769-71321788 | Msa1035520:intron | 20.0% |
| !!! | GTGTTTTAGTAAATTATAAG+TGG | + | chr7_1:71321858-71321877 | Msa1035520:intron | 20.0% |
| !! | AATTGAAGAGAAAAAATACA+TGG | - | chr7_1:71322515-71322534 | None:intergenic | 20.0% |
| !! | CAACATGATAAAAAATATCA+TGG | - | chr7_1:71322551-71322570 | None:intergenic | 20.0% |
| !!! | AACCCATTTATATATAGTTT+TGG | + | chr7_1:71322572-71322591 | Msa1035520:intron | 20.0% |
| !! | GACCAAAACTATATATAAAT+GGG | - | chr7_1:71322577-71322596 | None:intergenic | 20.0% |
| !! | TGACCAAAACTATATATAAA+TGG | - | chr7_1:71322578-71322597 | None:intergenic | 20.0% |
| !!! | TTTAGCTTAATTTTATAGGT+AGG | + | chr7_1:71322649-71322668 | Msa1035520:intron | 20.0% |
| !! | AAATAAAGAAAAGAGGTAAA+TGG | + | chr7_1:71322707-71322726 | Msa1035520:intron | 20.0% |
| !! | AATAAAGAAAAGAGGTAAAT+GGG | + | chr7_1:71322708-71322727 | Msa1035520:intron | 20.0% |
| !! | TTTGTAAAAATGAGATATCA+TGG | + | chr7_1:71322964-71322983 | Msa1035520:intron | 20.0% |
| !! | GATAATTATTTCATAGAAGA+TGG | - | chr7_1:71323200-71323219 | None:intergenic | 20.0% |
| !! | GTAATTATTGTTTATTTCAC+TGG | + | chr7_1:71323708-71323727 | Msa1035520:intron | 20.0% |
| !! | TGCAAAAATATATTGCTTAA+AGG | + | chr7_1:71324294-71324313 | Msa1035520:intron | 20.0% |
| !!! | TCTTTTTAAAGAGAATAAGT+GGG | + | chr7_1:71324847-71324866 | Msa1035520:intron | 20.0% |
| !!! | GTGAATTTAATTTAGTTGAT+AGG | - | chr7_1:71324912-71324931 | None:intergenic | 20.0% |
| !! | TAGATGGTTACAATATAAAA+TGG | + | chr7_1:71325220-71325239 | Msa1035520:intron | 20.0% |
| !!! | TTTGGTTTAAAACAAAACAA+AGG | + | chr7_1:71325670-71325689 | Msa1035520:intron | 20.0% |
| !!! | TTGGTTTAAAACAAAACAAA+GGG | + | chr7_1:71325671-71325690 | Msa1035520:intron | 20.0% |
| !!! | GTTTAGTTTTCAAAAATTAC+GGG | - | chr7_1:71326101-71326120 | None:intergenic | 20.0% |
| !! | AAAAAAAATTCCATTGCTTT+GGG | - | chr7_1:71326173-71326192 | None:intergenic | 20.0% |
| !! | AAAAAAAAATTCCATTGCTT+TGG | - | chr7_1:71326174-71326193 | None:intergenic | 20.0% |
| !! | TTCTATTCAAAATCAAATCT+AGG | - | chr7_1:71326221-71326240 | None:intergenic | 20.0% |
| !! | AATAGAAAATACCAATTTGT+AGG | + | chr7_1:71326234-71326253 | Msa1035520:intron | 20.0% |
| !! | ATGTAAGATGTATTTATAGA+GGG | - | chr7_1:71326796-71326815 | None:intergenic | 20.0% |
| !! | TTTCAGTGATAAGAAAAAAA+TGG | - | chr7_1:71326885-71326904 | None:intergenic | 20.0% |
| !! | CATGATTACAATAATATTGA+TGG | + | chr7_1:71327313-71327332 | Msa1035520:CDS | 20.0% |
| !!! | AATAATATTGATGGATCTTT+GGG | + | chr7_1:71327322-71327341 | Msa1035520:CDS | 20.0% |
| ! | AAAACTCTTTGTGAAAATTG+TGG | - | chr7_1:71320136-71320155 | None:intergenic | 25.0% |
| ! | AAGATTCATCAATGTTGTTA+TGG | - | chr7_1:71320300-71320319 | None:intergenic | 25.0% |
| ! | AACAACATTGATGAATCTTT+AGG | + | chr7_1:71320301-71320320 | Msa1035520:intron | 25.0% |
| !! | GATATGCTTGTTAATTTCTT+TGG | - | chr7_1:71320848-71320867 | None:intergenic | 25.0% |
| ! | AAATTAACAAGCATATCATG+TGG | + | chr7_1:71320851-71320870 | Msa1035520:intron | 25.0% |
| ! | AAATGAATACATCAATGTGT+GGG | + | chr7_1:71320920-71320939 | Msa1035520:intron | 25.0% |
| !!! | TTTTCTTCTTCTTTTTCAAG+GGG | + | chr7_1:71320958-71320977 | Msa1035520:intron | 25.0% |
| ! | AACATGCGTTGTTATATATA+GGG | - | chr7_1:71321017-71321036 | None:intergenic | 25.0% |
| !!! | AACTTATTTGTTTTGGTCTT+TGG | - | chr7_1:71321132-71321151 | None:intergenic | 25.0% |
| ! | TTGATGGAAAATGATGTAAT+TGG | + | chr7_1:71321474-71321493 | Msa1035520:intron | 25.0% |
| !! | ATATTTGGAATGATGAAAGT+GGG | - | chr7_1:71321704-71321723 | None:intergenic | 25.0% |
| !! | AATATTTGGAATGATGAAAG+TGG | - | chr7_1:71321705-71321724 | None:intergenic | 25.0% |
| !!! | TGTTTTAGTAAAGTACAAGT+AGG | - | chr7_1:71322038-71322057 | None:intergenic | 25.0% |
| !!! | TGTTTTGGTAAATAACTAGT+AGG | + | chr7_1:71322148-71322167 | Msa1035520:intron | 25.0% |
| !!! | TATTTTAGTGGAATTTGATC+TGG | - | chr7_1:71322359-71322378 | None:intergenic | 25.0% |
| ! | AGATCAAATTCCACTAAAAT+AGG | + | chr7_1:71322358-71322377 | Msa1035520:intron | 25.0% |
| ! | AAATTCCACTAAAATAGGAT+CGG | + | chr7_1:71322363-71322382 | Msa1035520:intron | 25.0% |
| !! | ATGACTATATTTTTCCTCTT+CGG | + | chr7_1:71322791-71322810 | Msa1035520:intron | 25.0% |
| ! | ATTAAGCAAATTGCATATTC+AGG | - | chr7_1:71322852-71322871 | None:intergenic | 25.0% |
| !! | ATATGCAATTTGCTTAATTC+TGG | + | chr7_1:71322854-71322873 | Msa1035520:intron | 25.0% |
| ! | CTAAGTGTGAATCATAAAAT+TGG | + | chr7_1:71323073-71323092 | Msa1035520:intron | 25.0% |
| ! | AAATGAAGATTTGAGAAAGA+AGG | + | chr7_1:71323107-71323126 | Msa1035520:intron | 25.0% |
| ! | AATGAAGATTTGAGAAAGAA+GGG | + | chr7_1:71323108-71323127 | Msa1035520:intron | 25.0% |
| ! | AACCATTAAGATTAATCCAA+TGG | + | chr7_1:71323374-71323393 | Msa1035520:intron | 25.0% |
| ! | AACCATTGGATTAATCTTAA+TGG | - | chr7_1:71323379-71323398 | None:intergenic | 25.0% |
| ! | TTAAGATTAATCCAATGGTT+AGG | + | chr7_1:71323379-71323398 | Msa1035520:intron | 25.0% |
| ! | GTTTGATTATATGTATGTGT+GGG | - | chr7_1:71324518-71324537 | None:intergenic | 25.0% |
| ! | AGTTTGATTATATGTATGTG+TGG | - | chr7_1:71324519-71324538 | None:intergenic | 25.0% |
| !!! | TTTTTTGTCAAGTAGTCTAT+TGG | + | chr7_1:71324814-71324833 | Msa1035520:intron | 25.0% |
| !!! | CTCTTTTTAAAGAGAATAAG+TGG | + | chr7_1:71324846-71324865 | Msa1035520:intron | 25.0% |
| !!! | CTTTTTAAAGAGAATAAGTG+GGG | + | chr7_1:71324848-71324867 | Msa1035520:intron | 25.0% |
| ! | TTCGTGAAAATTAATATGGT+TGG | - | chr7_1:71324970-71324989 | None:intergenic | 25.0% |
| ! | AAGGTTCGTGAAAATTAATA+TGG | - | chr7_1:71324974-71324993 | None:intergenic | 25.0% |
| !!! | ATTTTATTTCACTCGTGAAA+AGG | + | chr7_1:71326075-71326094 | Msa1035520:intron | 25.0% |
| ! | AAAAAAATTCCATTGCTTTG+GGG | - | chr7_1:71326172-71326191 | None:intergenic | 25.0% |
| ! | TTCCTAAAAACTAGTCATTT+AGG | + | chr7_1:71326193-71326212 | Msa1035520:intron | 25.0% |
| ! | TCCTAAAAACTAGTCATTTA+GGG | + | chr7_1:71326194-71326213 | Msa1035520:intron | 25.0% |
| ! | TTTATTTGATAAGTCATGCT+TGG | - | chr7_1:71326355-71326374 | None:intergenic | 25.0% |
| ! | TGTAAGATGTATTTATAGAG+GGG | - | chr7_1:71326795-71326814 | None:intergenic | 25.0% |
| ! | GATGTAAGATGTATTTATAG+AGG | - | chr7_1:71326797-71326816 | None:intergenic | 25.0% |
| ! | AAATACATCTTACATCTCAA+AGG | + | chr7_1:71326801-71326820 | Msa1035520:intron | 25.0% |
| ! | ACACAATTTGCAACATAAAT+CGG | + | chr7_1:71327077-71327096 | Msa1035520:CDS | 25.0% |
| !! | CAATAATATTGATGGATCTT+TGG | + | chr7_1:71327321-71327340 | Msa1035520:CDS | 25.0% |
| !! | ATAATATTGATGGATCTTTG+GGG | + | chr7_1:71327323-71327342 | Msa1035520:CDS | 25.0% |
| !!! | ATGGTGTGTTGTTTTCATTT+TGG | - | chr7_1:71320087-71320106 | None:intergenic | 30.0% |
| AACATTGATGAATCTTTAGG+AGG | + | chr7_1:71320304-71320323 | Msa1035520:intron | 30.0% | |
| !! | AGTGATGGTTTGTTTGAAAT+GGG | + | chr7_1:71320400-71320419 | Msa1035520:intron | 30.0% |
| !! | TTGTTTTACAGAGACATTGT+TGG | + | chr7_1:71320585-71320604 | Msa1035520:intron | 30.0% |
| GTTGGACTTAATTATTGTCA+AGG | + | chr7_1:71320603-71320622 | Msa1035520:intron | 30.0% | |
| CAAAACTAATCAAAAGACAG+AGG | - | chr7_1:71320654-71320673 | None:intergenic | 30.0% | |
| ! | AAACTGAGGTTTTCAATGAA+AGG | + | chr7_1:71320882-71320901 | Msa1035520:intron | 30.0% |
| ! | AACTGAGGTTTTCAATGAAA+GGG | + | chr7_1:71320883-71320902 | Msa1035520:intron | 30.0% |
| CAATGAAAGGGAAAACAAAT+TGG | + | chr7_1:71320895-71320914 | Msa1035520:intron | 30.0% | |
| CAAATGAATACATCAATGTG+TGG | + | chr7_1:71320919-71320938 | Msa1035520:intron | 30.0% | |
| ACATGCGTTGTTATATATAG+GGG | - | chr7_1:71321016-71321035 | None:intergenic | 30.0% | |
| GAACATGCGTTGTTATATAT+AGG | - | chr7_1:71321018-71321037 | None:intergenic | 30.0% | |
| !!! | ATCGGATGGAGTATTTTTTA+TGG | - | chr7_1:71321276-71321295 | None:intergenic | 30.0% |
| TGCTTATAATAGTAATCGGA+TGG | - | chr7_1:71321290-71321309 | None:intergenic | 30.0% | |
| ! | AATTTTGCTTGTAACAGTGA+CGG | + | chr7_1:71321401-71321420 | Msa1035520:intron | 30.0% |
| ! | ATAGAAAAACATGGGTGTTT+TGG | + | chr7_1:71322133-71322152 | Msa1035520:intron | 30.0% |
| TAACTAAAATGAGAGATGAG+AGG | + | chr7_1:71322299-71322318 | Msa1035520:intron | 30.0% | |
| AACCATTGGATCAAAATACA+CGG | + | chr7_1:71322332-71322351 | Msa1035520:intron | 30.0% | |
| ATAACGAATTGAAGAAACAG+GGG | - | chr7_1:71322483-71322502 | None:intergenic | 30.0% | |
| GATAACGAATTGAAGAAACA+GGG | - | chr7_1:71322484-71322503 | None:intergenic | 30.0% | |
| ! | TGATAACGAATTGAAGAAAC+AGG | - | chr7_1:71322485-71322504 | None:intergenic | 30.0% |
| ! | TTTTCTCTTCAATTCCAGAT+CGG | + | chr7_1:71322521-71322540 | Msa1035520:intron | 30.0% |
| TTATTGTAGAAAATCCAACG+CGG | - | chr7_1:71322626-71322645 | None:intergenic | 30.0% | |
| !! | TCTCATTTTTACAAATGCAG+CGG | - | chr7_1:71322959-71322978 | None:intergenic | 30.0% |
| TCATGGTAAAGATCAATCTA+AGG | + | chr7_1:71322981-71323000 | Msa1035520:intron | 30.0% | |
| CATGGTAAAGATCAATCTAA+GGG | + | chr7_1:71322982-71323001 | Msa1035520:intron | 30.0% | |
| ! | TTTTATTGTGAGAGATGAGA+GGG | - | chr7_1:71323411-71323430 | None:intergenic | 30.0% |
| CATTACCCAAACAATGAAAA+GGG | - | chr7_1:71323639-71323658 | None:intergenic | 30.0% | |
| ACCACATAAAAGCAATCTAA+CGG | - | chr7_1:71323999-71324018 | None:intergenic | 30.0% | |
| !! | ATTGCTTTTATGTGGTAGAT+AGG | + | chr7_1:71324003-71324022 | Msa1035520:intron | 30.0% |
| TGTACATAGTTTCATGTAGT+AGG | - | chr7_1:71324671-71324690 | None:intergenic | 30.0% | |
| AAAAATGGTGAGATATGGTT+GGG | - | chr7_1:71324721-71324740 | None:intergenic | 30.0% | |
| AAAAAATGGTGAGATATGGT+TGG | - | chr7_1:71324722-71324741 | None:intergenic | 30.0% | |
| !!! | ACCATATCTCACCATTTTTT+AGG | + | chr7_1:71324722-71324741 | Msa1035520:intron | 30.0% |
| !!! | CCATATCTCACCATTTTTTA+GGG | + | chr7_1:71324723-71324742 | Msa1035520:intron | 30.0% |
| !!! | CATATCTCACCATTTTTTAG+GGG | + | chr7_1:71324724-71324743 | Msa1035520:intron | 30.0% |
| ! | ATTTGTCCCTTTGTTATGTA+AGG | + | chr7_1:71324759-71324778 | Msa1035520:intron | 30.0% |
| ! | TTTGTCCCTTTGTTATGTAA+GGG | + | chr7_1:71324760-71324779 | Msa1035520:intron | 30.0% |
| TTATGTAAGGGACTTCTATA+TGG | + | chr7_1:71324772-71324791 | Msa1035520:intron | 30.0% | |
| CATAATATATACAGGAGTTG+AGG | - | chr7_1:71324882-71324901 | None:intergenic | 30.0% | |
| GGACATTGCATAATATATAC+AGG | - | chr7_1:71324890-71324909 | None:intergenic | 30.0% | |
| TTAGTGCAAAATGGAAGAAA+AGG | - | chr7_1:71324993-71325012 | None:intergenic | 30.0% | |
| GAAGAAAGTTTAGTGCAAAA+TGG | - | chr7_1:71325002-71325021 | None:intergenic | 30.0% | |
| CAATAAAAATAGCCAACAGA+CGG | + | chr7_1:71325342-71325361 | Msa1035520:intron | 30.0% | |
| AATAAAAATAGCCAACAGAC+GGG | + | chr7_1:71325343-71325362 | Msa1035520:intron | 30.0% | |
| AGGCTTTCTTTCTAATGAAA+GGG | - | chr7_1:71325887-71325906 | None:intergenic | 30.0% | |
| CATAATTGTAAGATAACCGA+GGG | - | chr7_1:71326132-71326151 | None:intergenic | 30.0% | |
| AAAAAATTCCATTGCTTTGG+GGG | - | chr7_1:71326171-71326190 | None:intergenic | 30.0% | |
| !!! | ACCCTAAATGACTAGTTTTT+AGG | - | chr7_1:71326198-71326217 | None:intergenic | 30.0% |
| ! | TAAAGTTGACAGCGAATTTT+AGG | - | chr7_1:71326260-71326279 | None:intergenic | 30.0% |
| TGAATGCATGTACATGTAAT+GGG | - | chr7_1:71326648-71326667 | None:intergenic | 30.0% | |
| TTGAATGCATGTACATGTAA+TGG | - | chr7_1:71326649-71326668 | None:intergenic | 30.0% | |
| TAAGATGTATTTATAGAGGG+GGG | - | chr7_1:71326793-71326812 | None:intergenic | 30.0% | |
| GTAAGATGTATTTATAGAGG+GGG | - | chr7_1:71326794-71326813 | None:intergenic | 30.0% | |
| CACAATTTGCAACATAAATC+GGG | + | chr7_1:71327078-71327097 | Msa1035520:CDS | 30.0% | |
| TGTAAATCTTGTGATGTTGT+TGG | - | chr7_1:71327145-71327164 | None:intergenic | 30.0% | |
| TAATTACCACGTCCATACAT+GGG | - | chr7_1:71320211-71320230 | None:intergenic | 35.0% | |
| ATAATTACCACGTCCATACA+TGG | - | chr7_1:71320212-71320231 | None:intergenic | 35.0% | |
| AACATTGGAATCTCTGGTAT+AGG | - | chr7_1:71320262-71320281 | None:intergenic | 35.0% | |
| TCTTTCTTTGATTGACAAGC+CGG | + | chr7_1:71320339-71320358 | Msa1035520:CDS | 35.0% | |
| !! | GAGTGATGGTTTGTTTGAAA+TGG | + | chr7_1:71320399-71320418 | Msa1035520:intron | 35.0% |
| ! | CTACCATGATTTGAAACTCT+AGG | + | chr7_1:71320462-71320481 | Msa1035520:intron | 35.0% |
| CAACCTAGAGTTTCAAATCA+TGG | - | chr7_1:71320468-71320487 | None:intergenic | 35.0% | |
| !! | TGAAACTCTAGGTTGATCTA+TGG | + | chr7_1:71320473-71320492 | Msa1035520:intron | 35.0% |
| TGTCAAGGCATGTTTGATAT+CGG | + | chr7_1:71320618-71320637 | Msa1035520:intron | 35.0% | |
| TGTTCTTGTCAACTGAACTA+CGG | + | chr7_1:71321033-71321052 | Msa1035520:intron | 35.0% | |
| ATGCTTAACCAATATCCATG+AGG | - | chr7_1:71321109-71321128 | None:intergenic | 35.0% | |
| ! | ATTTTGCTTGTAACAGTGAC+GGG | + | chr7_1:71321402-71321421 | Msa1035520:intron | 35.0% |
| ! | ATTTTACGGCAGTTTCTTGA+TGG | + | chr7_1:71321458-71321477 | Msa1035520:intron | 35.0% |
| AAGTGGGTGTAAATTAGTGA+AGG | - | chr7_1:71321688-71321707 | None:intergenic | 35.0% | |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | + | chr7_1:71321894-71321913 | Msa1035520:intron | 35.0% |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | - | chr7_1:71321894-71321913 | None:intergenic | 35.0% |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | + | chr7_1:71321894-71321913 | Msa1035520:intron | 35.0% |
| TATAGGGCATATCAAATGAG+AGG | + | chr7_1:71322274-71322293 | Msa1035520:intron | 35.0% | |
| GAGGATATAATAGCAACCAT+TGG | + | chr7_1:71322318-71322337 | Msa1035520:intron | 35.0% | |
| AACAGTCGATGAAGATTGAA+GGG | - | chr7_1:71322451-71322470 | None:intergenic | 35.0% | |
| TAACGAATTGAAGAAACAGG+GGG | - | chr7_1:71322482-71322501 | None:intergenic | 35.0% | |
| TTTCTCTTCAATTCCAGATC+GGG | + | chr7_1:71322522-71322541 | Msa1035520:intron | 35.0% | |
| TTACAAACACAGTCAGATTC+TGG | - | chr7_1:71322883-71322902 | None:intergenic | 35.0% | |
| TGTGAGAGAAGAAAGAAGAA+GGG | + | chr7_1:71322908-71322927 | Msa1035520:intron | 35.0% | |
| TATGGATACACAACCATCTT+TGG | + | chr7_1:71323235-71323254 | Msa1035520:intron | 35.0% | |
| !! | GTTTTATTGTGAGAGATGAG+AGG | - | chr7_1:71323412-71323431 | None:intergenic | 35.0% |
| ! | CAGAACCCTTTTCATTGTTT+GGG | + | chr7_1:71323631-71323650 | Msa1035520:intron | 35.0% |
| CCATTACCCAAACAATGAAA+AGG | - | chr7_1:71323640-71323659 | None:intergenic | 35.0% | |
| ! | CCTTTTCATTGTTTGGGTAA+TGG | + | chr7_1:71323637-71323656 | Msa1035520:intron | 35.0% |
| !! | ACCGTTAGATTGCTTTTATG+TGG | + | chr7_1:71323995-71324014 | Msa1035520:intron | 35.0% |
| TTCAGTTCACAATTCTACTC+AGG | + | chr7_1:71324073-71324092 | Msa1035520:intron | 35.0% | |
| AAGCTCAAGTTCAACTCATT+TGG | + | chr7_1:71324615-71324634 | Msa1035520:intron | 35.0% | |
| CTATGTACACTAGTTACATC+AGG | + | chr7_1:71324682-71324701 | Msa1035520:intron | 35.0% | |
| CTAGTTACATCAGGAAATTC+TGG | + | chr7_1:71324691-71324710 | Msa1035520:intron | 35.0% | |
| CCCTAAAAAATGGTGAGATA+TGG | - | chr7_1:71324726-71324745 | None:intergenic | 35.0% | |
| TGAGATATGCCCCTAAAAAA+TGG | - | chr7_1:71324736-71324755 | None:intergenic | 35.0% | |
| GAAGTCCCTTACATAACAAA+GGG | - | chr7_1:71324768-71324787 | None:intergenic | 35.0% | |
| AGAAGTCCCTTACATAACAA+AGG | - | chr7_1:71324769-71324788 | None:intergenic | 35.0% | |
| TCATGATGGTAAGATATGGT+TGG | - | chr7_1:71325781-71325800 | None:intergenic | 35.0% | |
| AACCATATCTTACCATCATG+AGG | + | chr7_1:71325780-71325799 | Msa1035520:intron | 35.0% | |
| CAGGCTTTCTTTCTAATGAA+AGG | - | chr7_1:71325888-71325907 | None:intergenic | 35.0% | |
| CTTTCATTAGAAAGAAAGCC+TGG | + | chr7_1:71325886-71325905 | Msa1035520:intron | 35.0% | |
| ! | AACTAAACTTTTCGATCCCT+CGG | + | chr7_1:71326113-71326132 | Msa1035520:intron | 35.0% |
| CCATAATTGTAAGATAACCG+AGG | - | chr7_1:71326133-71326152 | None:intergenic | 35.0% | |
| CCTCGGTTATCTTACAATTA+TGG | + | chr7_1:71326130-71326149 | Msa1035520:intron | 35.0% | |
| ! | AAAAATTCCATTGCTTTGGG+GGG | - | chr7_1:71326170-71326189 | None:intergenic | 35.0% |
| ! | CGAATTTTAGGCCTACAAAT+TGG | - | chr7_1:71326248-71326267 | None:intergenic | 35.0% |
| AAGATGTATTTATAGAGGGG+GGG | - | chr7_1:71326792-71326811 | None:intergenic | 35.0% | |
| GTTAGAGTAAGAACAAGAGT+AGG | - | chr7_1:71326980-71326999 | None:intergenic | 35.0% | |
| !!! | TTTTGAAGGTGTTATGGCAA+TGG | - | chr7_1:71327024-71327043 | None:intergenic | 35.0% |
| !! | AAGATCTTGTGCAGTTTTGA+AGG | - | chr7_1:71327038-71327057 | None:intergenic | 35.0% |
| AAACTGCACAAGATCTTTCT+TGG | + | chr7_1:71327041-71327060 | Msa1035520:CDS | 35.0% | |
| TGCAAATTGTGTATGAGCTT+TGG | - | chr7_1:71327069-71327088 | None:intergenic | 35.0% | |
| GTTGGTATGAATGTTTGTGA+TGG | - | chr7_1:71327127-71327146 | None:intergenic | 35.0% | |
| AGATCTTCTTTGTACCACAT+TGG | + | chr7_1:71327166-71327185 | Msa1035520:CDS | 35.0% | |
| TAATTACCACTTCCATGCAT+AGG | - | chr7_1:71327232-71327251 | None:intergenic | 35.0% | |
| TCAATTGGAGCAGAATCAAT+CGG | - | chr7_1:71327382-71327401 | None:intergenic | 35.0% | |
| GGTGGTATGAATGTTGTCAA+TGG | - | chr7_1:71320106-71320125 | None:intergenic | 40.0% | |
| !! | TGTGAAAATTGTGGTGTTGC+TGG | - | chr7_1:71320127-71320146 | None:intergenic | 40.0% |
| AACATAGTGTGAGATGAAGG+TGG | - | chr7_1:71320187-71320206 | None:intergenic | 40.0% | |
| GGAAACATAGTGTGAGATGA+AGG | - | chr7_1:71320190-71320209 | None:intergenic | 40.0% | |
| CACACTATGTTTCCCATGTA+TGG | + | chr7_1:71320196-71320215 | Msa1035520:CDS | 40.0% | |
| TGTTATGGTAAAGACGAGCA+GGG | - | chr7_1:71320285-71320304 | None:intergenic | 40.0% | |
| TTGTTATGGTAAAGACGAGC+AGG | - | chr7_1:71320286-71320305 | None:intergenic | 40.0% | |
| ! | TGAATCTTTAGGAGGAGCAA+TGG | + | chr7_1:71320312-71320331 | Msa1035520:intron | 40.0% |
| !! | TTTGTTGTTGTTCCTGTTGC+TGG | - | chr7_1:71320431-71320450 | None:intergenic | 40.0% |
| ! | ATGTGGTCTTGATCAAACTG+AGG | + | chr7_1:71320868-71320887 | Msa1035520:intron | 40.0% |
| GTTCTTGTCAACTGAACTAC+GGG | + | chr7_1:71321034-71321053 | Msa1035520:intron | 40.0% | |
| TTCTTGTCAACTGAACTACG+GGG | + | chr7_1:71321035-71321054 | Msa1035520:intron | 40.0% | |
| GAATGTTAACAAGTGCCTCA+TGG | + | chr7_1:71321091-71321110 | Msa1035520:intron | 40.0% | |
| AACAAGTGCCTCATGGATAT+TGG | + | chr7_1:71321098-71321117 | Msa1035520:intron | 40.0% | |
| ! | TTTTGCTTGTAACAGTGACG+GGG | + | chr7_1:71321403-71321422 | Msa1035520:intron | 40.0% |
| !!! | TGCACCTTAGTGTTTTTAGG+TGG | + | chr7_1:71321897-71321916 | Msa1035520:intron | 40.0% |
| !!! | GCACCTTAGTGTTTTTAGGT+GGG | + | chr7_1:71321898-71321917 | Msa1035520:intron | 40.0% |
| ACACCCACCTAAAAACACTA+AGG | - | chr7_1:71321904-71321923 | None:intergenic | 40.0% | |
| !!! | GCACCTTAGTGTTTTTAGGT+GGG | - | chr7_1:71321898-71321917 | None:intergenic | 40.0% |
| !!! | TGCACCTTAGTGTTTTTAGG+TGG | - | chr7_1:71321897-71321916 | None:intergenic | 40.0% |
| !!! | TGCACCTTAGTGTTTTTAGG+TGG | + | chr7_1:71321897-71321916 | Msa1035520:intron | 40.0% |
| !!! | GCACCTTAGTGTTTTTAGGT+GGG | + | chr7_1:71321898-71321917 | Msa1035520:intron | 40.0% |
| !!! | GACCGTGTATTTTGATCCAA+TGG | - | chr7_1:71322337-71322356 | None:intergenic | 40.0% |
| GATGAAGATTGAAGGGATAG+AGG | - | chr7_1:71322444-71322463 | None:intergenic | 40.0% | |
| GAACAGTCGATGAAGATTGA+AGG | - | chr7_1:71322452-71322471 | None:intergenic | 40.0% | |
| AATATCATGGATTCCCGATC+TGG | - | chr7_1:71322538-71322557 | None:intergenic | 40.0% | |
| ATCCAACGCGGAAGAAAAAA+GGG | - | chr7_1:71322614-71322633 | None:intergenic | 40.0% | |
| AATCCAACGCGGAAGAAAAA+AGG | - | chr7_1:71322615-71322634 | None:intergenic | 40.0% | |
| TCCTCTTCGGCAATGATTAA+TGG | + | chr7_1:71322804-71322823 | Msa1035520:intron | 40.0% | |
| TCCATTAATCATTGCCGAAG+AGG | - | chr7_1:71322808-71322827 | None:intergenic | 40.0% | |
| CTGTGAGAGAAGAAAGAAGA+AGG | + | chr7_1:71322907-71322926 | Msa1035520:intron | 40.0% | |
| !! | GAAGAAAGAAGAAGGGTATC+AGG | + | chr7_1:71322915-71322934 | Msa1035520:intron | 40.0% |
| !! | AAGAAGGGTATCAGGATTGA+AGG | + | chr7_1:71322923-71322942 | Msa1035520:intron | 40.0% |
| AGAAGGGTAGTTGAATCTCA+TGG | + | chr7_1:71323124-71323143 | Msa1035520:intron | 40.0% | |
| ACCATCTTTGGATCTCAAGA+AGG | + | chr7_1:71323247-71323266 | Msa1035520:intron | 40.0% | |
| CCATCTTTGGATCTCAAGAA+GGG | + | chr7_1:71323248-71323267 | Msa1035520:intron | 40.0% | |
| CATCTTTGGATCTCAAGAAG+GGG | + | chr7_1:71323249-71323268 | Msa1035520:intron | 40.0% | |
| GAGGGTTAAATCCTAACCAT+TGG | - | chr7_1:71323393-71323412 | None:intergenic | 40.0% | |
| CCAAACAATGAAAAGGGTTC+TGG | - | chr7_1:71323633-71323652 | None:intergenic | 40.0% | |
| ! | CCAGAACCCTTTTCATTGTT+TGG | + | chr7_1:71323630-71323649 | Msa1035520:intron | 40.0% |
| ! | GTGGAATCTAGCTCAATAGT+TGG | - | chr7_1:71323868-71323887 | None:intergenic | 40.0% |
| ACGTTAACACAGTTACTACG+TGG | - | chr7_1:71323887-71323906 | None:intergenic | 40.0% | |
| ! | TGAACCTAACGAGTTGAATC+AGG | - | chr7_1:71324155-71324174 | None:intergenic | 40.0% |
| TAAGGGACTTCTATATGGTC+CGG | + | chr7_1:71324777-71324796 | Msa1035520:intron | 40.0% | |
| AGCCTCATGATGGTAAGATA+TGG | - | chr7_1:71325785-71325804 | None:intergenic | 40.0% | |
| TAGTACCCTAACGATAAGCT+AGG | + | chr7_1:71325821-71325840 | Msa1035520:intron | 40.0% | |
| TTGGTCCTAGCTTATCGTTA+GGG | - | chr7_1:71325829-71325848 | None:intergenic | 40.0% | |
| TTTGGTCCTAGCTTATCGTT+AGG | - | chr7_1:71325830-71325849 | None:intergenic | 40.0% | |
| ! | AATGACCACTGAGCTTTTGT+GGG | - | chr7_1:71325922-71325941 | None:intergenic | 40.0% |
| ! | AAATGACCACTGAGCTTTTG+TGG | - | chr7_1:71325923-71325942 | None:intergenic | 40.0% |
| ! | CTTTGGGGGGAAATATTGTT+GGG | - | chr7_1:71326157-71326176 | None:intergenic | 40.0% |
| AATATTTCCCCCCAAAGCAA+TGG | + | chr7_1:71326160-71326179 | Msa1035520:intron | 40.0% | |
| ! | TTCAAGGTAGGGCATGATTT+TGG | - | chr7_1:71326768-71326787 | None:intergenic | 40.0% |
| TGCAAGAAGCTAGAGAAATG+TGG | - | chr7_1:71326851-71326870 | None:intergenic | 40.0% | |
| TGGTTGCATCGAAATTCGAT+TGG | - | chr7_1:71327004-71327023 | None:intergenic | 40.0% | |
| !!! | GTGCAGTTTTGAAGGTGTTA+TGG | - | chr7_1:71327030-71327049 | None:intergenic | 40.0% |
| AACAACATGGTGTGTGATGA+AGG | - | chr7_1:71327208-71327227 | None:intergenic | 40.0% | |
| !! | ACCATGTTGTTTCCTATGCA+TGG | + | chr7_1:71327217-71327236 | Msa1035520:CDS | 40.0% |
| TCCATGCATAGGAAACAACA+TGG | - | chr7_1:71327221-71327240 | None:intergenic | 40.0% | |
| TTGTTTCCTATGCATGGAAG+TGG | + | chr7_1:71327223-71327242 | Msa1035520:CDS | 40.0% | |
| ACAATTGGAACCTCTGGTAT+AGG | - | chr7_1:71327280-71327299 | None:intergenic | 40.0% | |
| !! | TCCAATTGAAGAAGTACCAG+CGG | + | chr7_1:71327393-71327412 | Msa1035520:CDS | 40.0% |
| !! | GAAAATTGTGGTGTTGCTGG+TGG | - | chr7_1:71320124-71320143 | None:intergenic | 45.0% |
| !!! | AGAGTTTTTTCACGCCGCAA+TGG | + | chr7_1:71320148-71320167 | Msa1035520:CDS | 45.0% |
| ATAGTGTGAGATGAAGGTGG+TGG | - | chr7_1:71320184-71320203 | None:intergenic | 45.0% | |
| ATGTTTCCCATGTATGGACG+TGG | + | chr7_1:71320202-71320221 | Msa1035520:CDS | 45.0% | |
| TCATGTATGGACGAAAGCGA+CGG | - | chr7_1:71320237-71320256 | None:intergenic | 45.0% | |
| TCTGGTATAGGCCTCATGTA+TGG | - | chr7_1:71320250-71320269 | None:intergenic | 45.0% | |
| TAAAGACGAGCAGGGAACAT+TGG | - | chr7_1:71320277-71320296 | None:intergenic | 45.0% | |
| GCACCCACCTAAAAACACTA+AGG | + | chr7_1:71321993-71322012 | Msa1035520:intron | 45.0% | |
| GCACCCACCTAAAAACACTA+AGG | - | chr7_1:71321993-71322012 | None:intergenic | 45.0% | |
| !! | GTGTGCCGATCCTATTTTAG+TGG | - | chr7_1:71322371-71322390 | None:intergenic | 45.0% |
| CCCTTCTTGAGATCCAAAGA+TGG | - | chr7_1:71323251-71323270 | None:intergenic | 45.0% | |
| ! | TAGAGGGTGTATCAAGTGAG+AGG | - | chr7_1:71323436-71323455 | None:intergenic | 45.0% |
| GGTAGATAGGACTAGAAACG+AGG | + | chr7_1:71324016-71324035 | Msa1035520:intron | 45.0% | |
| AAACTCGTCTGAGCTTGACT+TGG | + | chr7_1:71324050-71324069 | Msa1035520:intron | 45.0% | |
| GCAACCTGATTCAACTCGTT+AGG | + | chr7_1:71324148-71324167 | Msa1035520:intron | 45.0% | |
| GTAGGTGATCTTGACCACTT+GGG | - | chr7_1:71324653-71324672 | None:intergenic | 45.0% | |
| AGTAGGTGATCTTGACCACT+TGG | - | chr7_1:71324654-71324673 | None:intergenic | 45.0% | |
| AATGGTGAGATATGGTTGGG+TGG | - | chr7_1:71324718-71324737 | None:intergenic | 45.0% | |
| AACGCTTGAAAGCCTCATGA+TGG | - | chr7_1:71325795-71325814 | None:intergenic | 45.0% | |
| ATGAAAGGGCCTAAGACTCA+GGG | - | chr7_1:71325873-71325892 | None:intergenic | 45.0% | |
| AATGAAAGGGCCTAAGACTC+AGG | - | chr7_1:71325874-71325893 | None:intergenic | 45.0% | |
| !! | GCTTTGGGGGGAAATATTGT+TGG | - | chr7_1:71326158-71326177 | None:intergenic | 45.0% |
| TTTATAGAGGGGGGGTTTCA+AGG | - | chr7_1:71326784-71326803 | None:intergenic | 45.0% | |
| AACATGGTGTGTGATGAAGG+TGG | - | chr7_1:71327205-71327224 | None:intergenic | 45.0% | |
| TGACGAGTACGAGAGACAAT+TGG | - | chr7_1:71327295-71327314 | None:intergenic | 45.0% | |
| ! | TGGATCTTTGGGGAGAACAA+TGG | + | chr7_1:71327333-71327352 | Msa1035520:CDS | 45.0% |
| ACCGCTGGTACTTCTTCAAT+TGG | - | chr7_1:71327397-71327416 | None:intergenic | 45.0% | |
| !!! | TATTCTAATTAATTTTAAAT+AGG | - | chr7_1:71321827-71321846 | None:intergenic | 5.0% |
| !! | TATATATATATATATATATG+GGG | + | chr7_1:71321959-71321978 | Msa1035520:intron | 5.0% |
| !!! | TAAACTTTATTTTAATTAAA+AGG | + | chr7_1:71322073-71322092 | Msa1035520:intron | 5.0% |
| !! | ATATATATATATATATATAG+GGG | - | chr7_1:71322259-71322278 | None:intergenic | 5.0% |
| !! | ATTATATATATATATATAGA+GGG | - | chr7_1:71323452-71323471 | None:intergenic | 5.0% |
| !! | TATTATATATATATATATAG+AGG | - | chr7_1:71323453-71323472 | None:intergenic | 5.0% |
| !!! | TTTTTAAAAGAAAAATTAAA+AGG | - | chr7_1:71324245-71324264 | None:intergenic | 5.0% |
| !!! | TTTTAATTTTTCTTTTAAAA+AGG | + | chr7_1:71324244-71324263 | Msa1035520:intron | 5.0% |
| !!! | TTGTTTTTATTAAAATTATT+TGG | - | chr7_1:71325279-71325298 | None:intergenic | 5.0% |
| !!! | AAATTTTATTAATTTTTTTG+AGG | + | chr7_1:71326294-71326313 | Msa1035520:intron | 5.0% |
| !! | ATAAAAAGAAAATTAAAATT+TGG | + | chr7_1:71326370-71326389 | Msa1035520:intron | 5.0% |
| !!! | TAATTAACATTATTTTATTT+TGG | + | chr7_1:71326543-71326562 | Msa1035520:intron | 5.0% |
| ! | TGAGATGAAGGTGGTGGTAG+TGG | - | chr7_1:71320178-71320197 | None:intergenic | 50.0% |
| ! | GTCGCTTTCGTCCATACATG+AGG | + | chr7_1:71320236-71320255 | Msa1035520:CDS | 50.0% |
| GCAGGGAACATTGGAATCTC+TGG | - | chr7_1:71320268-71320287 | None:intergenic | 50.0% | |
| TCCATTGGAGCAAGATCAGC+CGG | - | chr7_1:71320361-71320380 | None:intergenic | 50.0% | |
| !! | AAATGGGAAGCACCAGCAAC+AGG | + | chr7_1:71320416-71320435 | Msa1035520:intron | 50.0% |
| !!! | CACCCTTTTTTCTTCCGCGT+TGG | + | chr7_1:71322609-71322628 | Msa1035520:intron | 50.0% |
| GATCTCAAGAAGGGGAGAAC+TGG | + | chr7_1:71323257-71323276 | Msa1035520:intron | 50.0% | |
| GGAGAACTGGAAACGAGGAA+GGG | + | chr7_1:71323270-71323289 | Msa1035520:intron | 50.0% | |
| GAGAACTGGAAACGAGGAAG+GGG | + | chr7_1:71323271-71323290 | Msa1035520:intron | 50.0% | |
| AAGGAGGAAGCTAGTGAGTC+AGG | + | chr7_1:71323303-71323322 | Msa1035520:intron | 50.0% | |
| AGGAGGAAGCTAGTGAGTCA+GGG | + | chr7_1:71323304-71323323 | Msa1035520:intron | 50.0% | |
| CAGGGACGAATGATACAGTG+AGG | + | chr7_1:71323322-71323341 | Msa1035520:intron | 50.0% | |
| !! | AAGGGTTCTGGCTCCAATCA+TGG | - | chr7_1:71323621-71323640 | None:intergenic | 50.0% |
| AAGTCTATCCCACCAGCACA+AGG | - | chr7_1:71323738-71323757 | None:intergenic | 50.0% | |
| !! | GTGCTGGTGGGATAGACTTT+TGG | + | chr7_1:71323739-71323758 | Msa1035520:intron | 50.0% |
| GGTTCATGAACCAACCCAAG+TGG | + | chr7_1:71324636-71324655 | Msa1035520:intron | 50.0% | |
| GTGATCTTGACCACTTGGGT+TGG | - | chr7_1:71324649-71324668 | None:intergenic | 50.0% | |
| AAATAGCCAACAGACGGGCA+CGG | + | chr7_1:71325348-71325367 | Msa1035520:intron | 50.0% | |
| GTGCGTGGGTCAGTTTAGTT+TGG | - | chr7_1:71325848-71325867 | None:intergenic | 50.0% | |
| TGAAAGGGCCTAAGACTCAG+GGG | - | chr7_1:71325872-71325891 | None:intergenic | 50.0% | |
| !! | TGTGATGAAGGTGGTGGAGA+TGG | - | chr7_1:71327196-71327215 | None:intergenic | 50.0% |
| ATGGTGTGTGATGAAGGTGG+TGG | - | chr7_1:71327202-71327221 | None:intergenic | 50.0% | |
| ACCACCTTCATCCATCCATG+AGG | + | chr7_1:71327254-71327273 | Msa1035520:CDS | 50.0% | |
| TAGGCCTCATGGATGGATGA+AGG | - | chr7_1:71327261-71327280 | None:intergenic | 50.0% | |
| TCTGGTATAGGCCTCATGGA+TGG | - | chr7_1:71327268-71327287 | None:intergenic | 50.0% | |
| ATCCATGAGGCCTATACCAG+AGG | + | chr7_1:71327267-71327286 | Msa1035520:CDS | 50.0% | |
| AACCTCTGGTATAGGCCTCA+TGG | - | chr7_1:71327272-71327291 | None:intergenic | 50.0% | |
| CGAGAGACAATTGGAACCTC+TGG | - | chr7_1:71327286-71327305 | None:intergenic | 50.0% | |
| !! | TTGAAGAAGTACCAGCGGTC+TGG | + | chr7_1:71327398-71327417 | Msa1035520:CDS | 50.0% |
| !! | GTGGTAGTGGTGGTCCATTG+CGG | - | chr7_1:71320165-71320184 | None:intergenic | 55.0% |
| !! | GATGAAGGTGGTGGTAGTGG+TGG | - | chr7_1:71320175-71320194 | None:intergenic | 55.0% |
| GGCTGATCTTGCTCCAATGG+AGG | + | chr7_1:71320360-71320379 | Msa1035520:CDS | 55.0% | |
| TGCTCCAATGGAGGAACGAC+TGG | + | chr7_1:71320369-71320388 | Msa1035520:CDS | 55.0% | |
| TCCAATGGAGGAACGACTGG+TGG | + | chr7_1:71320372-71320391 | Msa1035520:CDS | 55.0% | |
| ACCACCAGTCGTTCCTCCAT+TGG | - | chr7_1:71320376-71320395 | None:intergenic | 55.0% | |
| ! | CGACTGGTGGTGTTGAGTGA+TGG | + | chr7_1:71320385-71320404 | Msa1035520:CDS | 55.0% |
| GAAGGGGAGAACTGGAAACG+AGG | + | chr7_1:71323265-71323284 | Msa1035520:intron | 55.0% | |
| GGGAGAACTGGAAACGAGGA+AGG | + | chr7_1:71323269-71323288 | Msa1035520:intron | 55.0% | |
| GGAAACGAGGAAGGGGAGAA+CGG | + | chr7_1:71323278-71323297 | Msa1035520:intron | 55.0% | |
| GAAACGAGGAAGGGGAGAAC+GGG | + | chr7_1:71323279-71323298 | Msa1035520:intron | 55.0% | |
| TTCACTGGCACACCTTGTGC+TGG | + | chr7_1:71323723-71323742 | Msa1035520:intron | 55.0% | |
| !! | TTTGTGGGCTGGGACTTTCC+AGG | - | chr7_1:71325907-71325926 | None:intergenic | 55.0% |
| ! | CCACTGAGCTTTTGTGGGCT+GGG | - | chr7_1:71325917-71325936 | None:intergenic | 55.0% |
| ! | ACCACTGAGCTTTTGTGGGC+TGG | - | chr7_1:71325918-71325937 | None:intergenic | 55.0% |
| AGAGGGGGGGTTTCAAGGTA+GGG | - | chr7_1:71326779-71326798 | None:intergenic | 55.0% | |
| TAGAGGGGGGGTTTCAAGGT+AGG | - | chr7_1:71326780-71326799 | None:intergenic | 55.0% | |
| ! | GTGGAGATGGTGGTCCAATG+TGG | - | chr7_1:71327183-71327202 | None:intergenic | 55.0% |
| !! | GATGAAGGTGGTGGAGATGG+TGG | - | chr7_1:71327193-71327212 | None:intergenic | 55.0% |
| GCCTCATGGATGGATGAAGG+TGG | - | chr7_1:71327258-71327277 | None:intergenic | 55.0% | |
| !! | AAGAAGTACCAGCGGTCTGG+CGG | + | chr7_1:71327401-71327420 | Msa1035520:CDS | 55.0% |
| GCCGGCTGATCTTGCTCCAA+TGG | + | chr7_1:71320357-71320376 | Msa1035520:CDS | 60.0% | |
| GAGGAAGGGGAGAACGGGAA+AGG | + | chr7_1:71323284-71323303 | Msa1035520:intron | 60.0% | |
| GAAGGGGAGAACGGGAAAGG+AGG | + | chr7_1:71323287-71323306 | Msa1035520:intron | 60.0% | |
| ACTGGCACACCTTGTGCTGG+TGG | + | chr7_1:71323726-71323745 | Msa1035520:intron | 60.0% | |
| ! | CTGGCACACCTTGTGCTGGT+GGG | + | chr7_1:71323727-71323746 | Msa1035520:intron | 60.0% |
| ! | TAAGACTCAGGGGCGTGCGT+GGG | - | chr7_1:71325862-71325881 | None:intergenic | 60.0% |
| CCCAGCCCACAAAAGCTCAG+TGG | + | chr7_1:71325914-71325933 | Msa1035520:intron | 60.0% | |
| !! | AGAAGTACCAGCGGTCTGGC+GGG | + | chr7_1:71327402-71327421 | Msa1035520:CDS | 60.0% |
| TGTGCGCATCCACACACGCG+TGG | + | chr7_1:71324489-71324508 | Msa1035520:intron | 65.0% | |
| GTGCGCATCCACACACGCGT+GGG | + | chr7_1:71324490-71324509 | Msa1035520:intron | 65.0% | |
| ACCACTCCGTGCCCGTCTGT+TGG | - | chr7_1:71325357-71325376 | None:intergenic | 65.0% | |
| ! | CTAAGACTCAGGGGCGTGCG+TGG | - | chr7_1:71325863-71325882 | None:intergenic | 65.0% |
| CACGCACGCCCCTGAGTCTT+AGG | + | chr7_1:71325861-71325880 | Msa1035520:intron | 65.0% | |
| TTTCCATCCCGCCAGACCGC+TGG | - | chr7_1:71327412-71327431 | None:intergenic | 65.0% | |
| TGTGGGCACCCACGCGTGTG+TGG | - | chr7_1:71324501-71324520 | None:intergenic | 70.0% | |
| GCCAACAGACGGGCACGGAG+TGG | + | chr7_1:71325353-71325372 | Msa1035520:intron | 70.0% | |
| GTACCAGCGGTCTGGCGGGA+TGG | + | chr7_1:71327406-71327425 | Msa1035520:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 71320073 | 71327465 | 71320073 | ID=Msa1035520;Name=Msa1035520 |
| chr7_1 | mRNA | 71320073 | 71327465 | 71320073 | ID=Msa1035520-mRNA-1;Parent=Msa1035520;Name=Msa1035520-mRNA-1;_AED=0.27;_eAED=0.30;_QI=0|0|0|1|0|0|3|0|283 |
| chr7_1 | exon | 71320073 | 71320289 | 71320073 | ID=Msa1035520-mRNA-1:exon:17248;Parent=Msa1035520-mRNA-1 |
| chr7_1 | exon | 71320323 | 71320406 | 71320323 | ID=Msa1035520-mRNA-1:exon:17249;Parent=Msa1035520-mRNA-1 |
| chr7_1 | exon | 71326915 | 71327465 | 71326915 | ID=Msa1035520-mRNA-1:exon:17250;Parent=Msa1035520-mRNA-1 |
| chr7_1 | CDS | 71320073 | 71320289 | 71320073 | ID=Msa1035520-mRNA-1:cds;Parent=Msa1035520-mRNA-1 |
| chr7_1 | CDS | 71320323 | 71320406 | 71320323 | ID=Msa1035520-mRNA-1:cds;Parent=Msa1035520-mRNA-1 |
| chr7_1 | CDS | 71326915 | 71327465 | 71326915 | ID=Msa1035520-mRNA-1:cds;Parent=Msa1035520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
