Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035530 | AES81523.1 | 58.333 | 72 | 17 | 2 | 42 | 100 | 78 | 149 | 3.90e-15 | 81.6 |
| Msa1035530 | AES81523.1 | 95.425 | 153 | 7 | 0 | 103 | 255 | 6 | 158 | 7.23e-95 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035530 | G7KWB3 | 58.333 | 72 | 17 | 2 | 42 | 100 | 78 | 149 | 1.86e-15 | 81.6 |
| Msa1035530 | G7KWB3 | 95.425 | 153 | 7 | 0 | 103 | 255 | 6 | 158 | 3.45e-95 | 285 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1035530 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035530 | MtrunA17_Chr7g0258981 | 95.425 | 153 | 7 | 0 | 103 | 255 | 6 | 158 | 6.65e-99 | 285 |
| Msa1035530 | MtrunA17_Chr7g0258981 | 58.333 | 72 | 17 | 2 | 42 | 100 | 78 | 149 | 3.59e-19 | 81.6 |
| Msa1035530 | MtrunA17_Chr3g0080591 | 46.939 | 98 | 38 | 3 | 1 | 87 | 1 | 95 | 3.99e-18 | 78.2 |
| Msa1035530 | MtrunA17_Chr3g0080591 | 49.451 | 91 | 22 | 2 | 169 | 235 | 32 | 122 | 5.77e-17 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 73 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATAATATCGATGGATCTT+TGG | 0.212883 | 7_1:+71336712 | Msa1035530:CDS |
| AATAATATCGATGGATCTTT+GGG | 0.246908 | 7_1:+71336713 | Msa1035530:CDS |
| GAACTGCACGAGATCTTTCT+TGG | 0.257265 | 7_1:+71336483 | Msa1035530:CDS |
| TAAAGACGAGTAGGGAAAAT+TGG | 0.289389 | 7_1:-71332147 | None:intergenic |
| ACACAATTTGCAACATAAAT+CGG | 0.291650 | 7_1:+71336519 | Msa1035530:CDS |
| CGTGAAAATCGTGGTGTTGC+TGG | 0.353095 | 7_1:-71331997 | None:intergenic |
| CTAATCAAGGTTGATGTCAT+TGG | 0.402881 | 7_1:-71336825 | None:intergenic |
| GTGCAGTTCTGAAGGTTTCA+TGG | 0.407889 | 7_1:-71336469 | None:intergenic |
| TGCAAATTGTGTATGTGCTT+TGG | 0.408651 | 7_1:-71336508 | None:intergenic |
| CACAATTTGCAACATAAATC+GGG | 0.419218 | 7_1:+71336520 | Msa1035530:CDS |
| AAAATTGGAATCTCTGGTAT+AGG | 0.429793 | 7_1:-71332132 | None:intergenic |
| ACAATTGGAACCTCTGGTAT+AGG | 0.433089 | 7_1:-71336668 | None:intergenic |
| GTAGGGAAAATTGGAATCTC+TGG | 0.436918 | 7_1:-71332138 | None:intergenic |
| TGGCAATGGTTGCATGGAAT+AGG | 0.448209 | 7_1:-71336449 | None:intergenic |
| TTCTGAAGGTTTCATGGCAA+TGG | 0.457643 | 7_1:-71336463 | None:intergenic |
| TCAGATGATGAGAGCAGTAC+TGG | 0.465223 | 7_1:+71336401 | Msa1035530:CDS |
| TCAGTTGGAGCTGAATCAAT+CGG | 0.471657 | 7_1:-71336770 | None:intergenic |
| TGAGATGAAGGTGGTGGTAG+TGG | 0.484354 | 7_1:-71332048 | None:intergenic |
| CGAGAGACAATTGGAACCTC+TGG | 0.486624 | 7_1:-71336674 | None:intergenic |
| TCTTTCTTTGATTGACAAGC+CGG | 0.490146 | 7_1:+71332212 | Msa1035530:CDS |
| TCTCATCATCTGATTCAGAT+AGG | 0.499444 | 7_1:-71336391 | None:intergenic |
| CAACCTAGAGCTTCTAATCA+AGG | 0.500174 | 7_1:-71336838 | None:intergenic |
| TGAGGAACGACCGGTGGTGT+GGG | 0.500328 | 7_1:+71332251 | Msa1035530:CDS |
| CACACTATGTTTCCCATGCA+TGG | 0.504244 | 7_1:+71332069 | Msa1035530:CDS |
| CTTCCATCCCGCCACACCAC+TGG | 0.504811 | 7_1:-71336800 | None:intergenic |
| CTGAGGAACGACCGGTGGTG+TGG | 0.509457 | 7_1:+71332250 | Msa1035530:CDS |
| TGCTCCAACTGAGGAACGAC+CGG | 0.510075 | 7_1:+71332242 | Msa1035530:CDS |
| TCTGGTATAGGCCTCATGTA+TGG | 0.510085 | 7_1:-71336656 | None:intergenic |
| ACCACTGGTAATTCTTCAGT+TGG | 0.510267 | 7_1:-71336785 | None:intergenic |
| TCTGGTATAGGCCTCATGTA+TGG | 0.510790 | 7_1:-71332120 | None:intergenic |
| TGTGATGAAGGTGGTGGAGA+TGG | 0.521845 | 7_1:-71336581 | None:intergenic |
| TAATTACCGCTTCCATGCAT+AGG | 0.528205 | 7_1:-71336617 | None:intergenic |
| ACTATGTTGTTTCCTATGCA+TGG | 0.528781 | 7_1:+71336605 | Msa1035530:CDS |
| TTACCAGTGGTGTGGCGGGA+TGG | 0.529438 | 7_1:+71336797 | Msa1035530:CDS |
| CGTGATTACAATAATATCGA+TGG | 0.538614 | 7_1:+71336704 | Msa1035530:CDS |
| TCAGTTGGAGCAAGATCAGC+CGG | 0.538743 | 7_1:-71332231 | None:intergenic |
| ATAATTACCACGTCCATGCA+TGG | 0.540019 | 7_1:-71332082 | None:intergenic |
| ACCACCGGTCGTTCCTCAGT+TGG | 0.542730 | 7_1:-71332246 | None:intergenic |
| GTTTCATGGCAATGGTTGCA+TGG | 0.544580 | 7_1:-71336455 | None:intergenic |
| AAGAATTACCAGTGGTGTGG+CGG | 0.548905 | 7_1:+71336792 | Msa1035530:CDS |
| GCCTCATGTATGGATGAAAA+CGG | 0.550640 | 7_1:-71336646 | None:intergenic |
| AAGATCTCGTGCAGTTCTGA+AGG | 0.551614 | 7_1:-71336477 | None:intergenic |
| TTGTTTCCTATGCATGGAAG+CGG | 0.563807 | 7_1:+71336611 | Msa1035530:CDS |
| TGTTATGGTAAAGACGAGTA+GGG | 0.574420 | 7_1:-71332155 | None:intergenic |
| ATGTTTCCCATGCATGGACG+TGG | 0.575400 | 7_1:+71332075 | Msa1035530:CDS |
| GGCTGATCTTGCTCCAACTG+AGG | 0.575874 | 7_1:+71332233 | Msa1035530:CDS |
| TGGATCTTTGGGGAGAACAA+TGG | 0.585871 | 7_1:+71336724 | Msa1035530:CDS |
| GGAAACATAGTGTGAGATGA+AGG | 0.586864 | 7_1:-71332060 | None:intergenic |
| TAATTACCACGTCCATGCAT+GGG | 0.590609 | 7_1:-71332081 | None:intergenic |
| CATGTATGGATGAAAACGAC+GGG | 0.590737 | 7_1:-71332106 | None:intergenic |
| AACAACATAGTGTGTGATGA+AGG | 0.595436 | 7_1:-71336593 | None:intergenic |
| AGAATTACCAGTGGTGTGGC+GGG | 0.597554 | 7_1:+71336793 | Msa1035530:CDS |
| GATGAAGGTGGTGGAGATGG+TGG | 0.599841 | 7_1:-71336578 | None:intergenic |
| GATGAAGGTGGTGGTAGTGG+TGG | 0.600039 | 7_1:-71332045 | None:intergenic |
| GGTGGTATGAATGTTGTCAA+TGG | 0.600830 | 7_1:-71331976 | None:intergenic |
| GTGGAGATGGTGGTCCAATG+TGG | 0.619599 | 7_1:-71336568 | None:intergenic |
| GTACTATCACCCCACACCAC+CGG | 0.628478 | 7_1:-71332261 | None:intergenic |
| CTAAACAACACACACCACAT+TGG | 0.630539 | 7_1:+71336554 | Msa1035530:CDS |
| GAGGAACGACCGGTGGTGTG+GGG | 0.635962 | 7_1:+71332252 | Msa1035530:CDS |
| AAAACTCTTCGTGAAAATCG+TGG | 0.643030 | 7_1:-71332006 | None:intergenic |
| CTGAAGAATTACCAGTGGTG+TGG | 0.651724 | 7_1:+71336789 | Msa1035530:CDS |
| GAAAATCGTGGTGTTGCTGG+TGG | 0.653945 | 7_1:-71331994 | None:intergenic |
| ATAGTGTGAGATGAAGGTGG+TGG | 0.665632 | 7_1:-71332054 | None:intergenic |
| TCATGTATGGATGAAAACGA+CGG | 0.675592 | 7_1:-71332107 | None:intergenic |
| GTGGTAGTGGTGGTCCATTG+CGG | 0.679358 | 7_1:-71332035 | None:intergenic |
| TCCAACTGAGGAACGACCGG+TGG | 0.682555 | 7_1:+71332245 | Msa1035530:CDS |
| ATACATGAGGCCTATACCAG+AGG | 0.686494 | 7_1:+71336658 | Msa1035530:CDS |
| AACATAGTGTGAGATGAAGG+TGG | 0.688373 | 7_1:-71332057 | None:intergenic |
| TCCAACTGAAGAATTACCAG+TGG | 0.699300 | 7_1:+71336784 | Msa1035530:CDS |
| ATAGTGTGTGATGAAGGTGG+TGG | 0.699659 | 7_1:-71336587 | None:intergenic |
| ATAATATCGATGGATCTTTG+GGG | 0.708326 | 7_1:+71336714 | Msa1035530:CDS |
| AACATAGTGTGTGATGAAGG+TGG | 0.727614 | 7_1:-71336590 | None:intergenic |
| TCATGTATGGATGAAAACGG+CGG | 0.744847 | 7_1:-71336643 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATATATATATTTTTTAA+AGG | + | chr7_1:71334975-71334994 | Msa1035530:intron | 0.0% |
| !!! | ATATATATATATTTTTTAAA+GGG | + | chr7_1:71334976-71334995 | Msa1035530:intron | 0.0% |
| !! | AAAAAAATACATCAATTTAA+AGG | + | chr7_1:71332890-71332909 | Msa1035530:intron | 10.0% |
| !! | AAAAAATACATCAATTTAAA+GGG | + | chr7_1:71332891-71332910 | Msa1035530:intron | 10.0% |
| !!! | TATATATATTTGCAATATTT+TGG | - | chr7_1:71333212-71333231 | None:intergenic | 10.0% |
| !! | TTTATATATAGTATAGATAA+AGG | - | chr7_1:71334572-71334591 | None:intergenic | 10.0% |
| !!! | ATAAAGAAAATACATATTTT+TGG | + | chr7_1:71334587-71334606 | Msa1035530:intron | 10.0% |
| !!! | TAAAGAAAATACATATTTTT+GGG | + | chr7_1:71334588-71334607 | Msa1035530:intron | 10.0% |
| !!! | TATATATATATATTTTGTTG+TGG | + | chr7_1:71334846-71334865 | Msa1035530:intron | 10.0% |
| !! | TATATATATATATATATGCA+AGG | - | chr7_1:71334891-71334910 | None:intergenic | 10.0% |
| !!! | TAAAATCATTTATTTTTTGA+CGG | + | chr7_1:71335901-71335920 | Msa1035530:intron | 10.0% |
| !!! | ATTAATTCCTATATTTTTTT+TGG | + | chr7_1:71336182-71336201 | Msa1035530:intron | 10.0% |
| !!! | TTTTAATCCAAAAAAAATAT+AGG | - | chr7_1:71336192-71336211 | None:intergenic | 10.0% |
| !!! | ATGGTTTTATAATTATGTAA+TGG | + | chr7_1:71332365-71332384 | Msa1035530:intron | 15.0% |
| !!! | TGGTTTTATAATTATGTAAT+GGG | + | chr7_1:71332366-71332385 | Msa1035530:intron | 15.0% |
| !!! | TTTTTTAATTTGTCTGATAT+CGG | + | chr7_1:71332450-71332469 | Msa1035530:intron | 15.0% |
| !!! | ATTAATGAAATGTTTTAGTT+TGG | + | chr7_1:71332548-71332567 | Msa1035530:intron | 15.0% |
| !!! | TTAATGAAATGTTTTAGTTT+GGG | + | chr7_1:71332549-71332568 | Msa1035530:intron | 15.0% |
| !!! | AAAAAAAAAAAAAGTATCAG+AGG | - | chr7_1:71332677-71332696 | None:intergenic | 15.0% |
| !! | AAAGAAAATATATTAGTAGA+TGG | - | chr7_1:71332863-71332882 | None:intergenic | 15.0% |
| !! | AAAAATACATCAATTTAAAG+GGG | + | chr7_1:71332892-71332911 | Msa1035530:intron | 15.0% |
| !!! | TACATATTTCATTTTTTTGA+AGG | + | chr7_1:71333023-71333042 | Msa1035530:intron | 15.0% |
| !!! | ACATATTTCATTTTTTTGAA+GGG | + | chr7_1:71333024-71333043 | Msa1035530:intron | 15.0% |
| !! | ATCAAACATATATTGTTTAA+AGG | + | chr7_1:71333697-71333716 | Msa1035530:intron | 15.0% |
| !!! | ATTCCAAATTTTACTTAAAT+TGG | + | chr7_1:71334150-71334169 | Msa1035530:intron | 15.0% |
| !!! | AAAGAAAATACATATTTTTG+GGG | + | chr7_1:71334589-71334608 | Msa1035530:intron | 15.0% |
| !!! | ATATTTTATCGAATAGAAAA+TGG | + | chr7_1:71335008-71335027 | Msa1035530:intron | 15.0% |
| !! | AATATACTAGGAATTAATTA+GGG | - | chr7_1:71335313-71335332 | None:intergenic | 15.0% |
| !! | AAATATACTAGGAATTAATT+AGG | - | chr7_1:71335314-71335333 | None:intergenic | 15.0% |
| !!! | TTAATTCCTAGTATATTTTT+CGG | + | chr7_1:71335316-71335335 | Msa1035530:intron | 15.0% |
| !!! | TTTAATTTTCAAAAAGTTAC+GGG | - | chr7_1:71335710-71335729 | None:intergenic | 15.0% |
| !!! | GTTTAATTTTCAAAAAGTTA+CGG | - | chr7_1:71335711-71335730 | None:intergenic | 15.0% |
| !! | TTCTATTCAAAATAAAAACT+AGG | - | chr7_1:71335830-71335849 | None:intergenic | 15.0% |
| !!! | AAAATCATTTATTTTTTGAC+GGG | + | chr7_1:71335902-71335921 | Msa1035530:intron | 15.0% |
| !!! | TAATTAATATCAGTTGATTT+TGG | + | chr7_1:71336007-71336026 | Msa1035530:intron | 15.0% |
| !!! | ATTCAAATACATTTTTTGAA+AGG | - | chr7_1:71336061-71336080 | None:intergenic | 15.0% |
| !! | AAAATATAGGAATTAATTAG+AGG | - | chr7_1:71336179-71336198 | None:intergenic | 15.0% |
| !! | TAGATTGGAAAAAAAAAATA+TGG | - | chr7_1:71336329-71336348 | None:intergenic | 15.0% |
| !! | AAAATTCATCAATGTTGTTA+TGG | - | chr7_1:71332173-71332192 | None:intergenic | 20.0% |
| !!! | AACAACATTGATGAATTTTT+AGG | + | chr7_1:71332174-71332193 | Msa1035530:intron | 20.0% |
| !!! | ACAACATTGATGAATTTTTA+GGG | + | chr7_1:71332175-71332194 | Msa1035530:intron | 20.0% |
| !!! | GGTTTTATAATTATGTAATG+GGG | + | chr7_1:71332367-71332386 | Msa1035530:intron | 20.0% |
| !!! | TCATTGTTTTGATTTTCATT+AGG | + | chr7_1:71332426-71332445 | Msa1035530:intron | 20.0% |
| !!! | CATTGTTTTGATTTTCATTA+GGG | + | chr7_1:71332427-71332446 | Msa1035530:intron | 20.0% |
| !! | TAAATTAAACTCATTTCAAG+AGG | - | chr7_1:71332604-71332623 | None:intergenic | 20.0% |
| !!! | CATATTTCATTTTTTTGAAG+GGG | + | chr7_1:71333025-71333044 | Msa1035530:intron | 20.0% |
| !!! | TTTAACATAACCAATTTGTT+AGG | - | chr7_1:71333134-71333153 | None:intergenic | 20.0% |
| !!! | CATATATCACCATTTTTTTA+GGG | + | chr7_1:71334263-71334282 | Msa1035530:intron | 20.0% |
| !!! | ATATATCACCATTTTTTTAG+GGG | + | chr7_1:71334264-71334283 | Msa1035530:intron | 20.0% |
| !! | TATTCGATAAAATATATGCA+AGG | - | chr7_1:71335003-71335022 | None:intergenic | 20.0% |
| !! | TTGAATATATGTAAGTGTAA+TGG | - | chr7_1:71335181-71335200 | None:intergenic | 20.0% |
| !! | GGAATTAAGAAAAATATACT+AGG | - | chr7_1:71335325-71335344 | None:intergenic | 20.0% |
| !! | TTTAAACCGAAAAATATACT+AGG | - | chr7_1:71335346-71335365 | None:intergenic | 20.0% |
| !!! | ATATCCCTTTTTATATGATT+GGG | - | chr7_1:71335398-71335417 | None:intergenic | 20.0% |
| !!! | AATATCCCTTTTTATATGAT+TGG | - | chr7_1:71335399-71335418 | None:intergenic | 20.0% |
| !! | TTTGGACAAAAAATATTGTT+GGG | - | chr7_1:71335767-71335786 | None:intergenic | 20.0% |
| !! | AATAGAAAATACCAATTTGT+AGG | + | chr7_1:71335843-71335862 | Msa1035530:intron | 20.0% |
| ! | AAAAACTAATCAAAAGACAG+AGG | - | chr7_1:71332486-71332505 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTATCTAGTTGTC+CGG | + | chr7_1:71332703-71332722 | Msa1035530:intron | 25.0% |
| ! | TATTAGTAGATGGAAGTAAA+AGG | - | chr7_1:71332853-71332872 | None:intergenic | 25.0% |
| ! | TAAAAAGTTCATTGTGAACA+CGG | - | chr7_1:71333481-71333500 | None:intergenic | 25.0% |
| ! | TAAATATAGTTCAACTCGTT+TGG | - | chr7_1:71334038-71334057 | None:intergenic | 25.0% |
| ! | AAAAAATGGTGATATATGGT+TGG | - | chr7_1:71334261-71334280 | None:intergenic | 25.0% |
| ! | CCTAAAAAAATGGTGATATA+TGG | - | chr7_1:71334265-71334284 | None:intergenic | 25.0% |
| !!! | CCATATATCACCATTTTTTT+AGG | + | chr7_1:71334262-71334281 | Msa1035530:intron | 25.0% |
| !! | TATGTCCCTTTGTTATATAT+AGG | + | chr7_1:71334300-71334319 | Msa1035530:intron | 25.0% |
| !! | ATGTCCCTTTGTTATATATA+GGG | + | chr7_1:71334301-71334320 | Msa1035530:intron | 25.0% |
| !! | GGTTAGAAATTCTCTTTTTA+AGG | + | chr7_1:71334407-71334426 | Msa1035530:intron | 25.0% |
| !!! | TCTTTTTAAGGAGAATAAGT+GGG | + | chr7_1:71334419-71334438 | Msa1035530:intron | 25.0% |
| ! | AAAGCTCGAGAAAATTAATA+TGG | - | chr7_1:71334526-71334545 | None:intergenic | 25.0% |
| ! | CTTATTGACACATTTGTTTA+AGG | - | chr7_1:71334639-71334658 | None:intergenic | 25.0% |
| ! | ATATATATATGCAAGGTATG+AGG | - | chr7_1:71334884-71334903 | None:intergenic | 25.0% |
| ! | TTAAAAATGACCAATCATGA+TGG | - | chr7_1:71335509-71335528 | None:intergenic | 25.0% |
| ! | CATAATTGTAAGATAACTGA+TGG | - | chr7_1:71335742-71335761 | None:intergenic | 25.0% |
| ! | CATCAGTTATCTTACAATTA+TGG | + | chr7_1:71335740-71335759 | Msa1035530:intron | 25.0% |
| ! | CTTTGGACAAAAAATATTGT+TGG | - | chr7_1:71335768-71335787 | None:intergenic | 25.0% |
| !!! | ATATTTTTTGTCCAAAGCAA+TGG | + | chr7_1:71335771-71335790 | Msa1035530:intron | 25.0% |
| ! | TCCTCAAAATTAGTCATTTA+GGG | + | chr7_1:71335803-71335822 | Msa1035530:intron | 25.0% |
| ! | TATTTATAGAGGATGTTTCA+AGG | - | chr7_1:71336247-71336266 | None:intergenic | 25.0% |
| ! | ACACAATTTGCAACATAAAT+CGG | + | chr7_1:71336519-71336538 | Msa1035530:CDS | 25.0% |
| ! | AATAATATCGATGGATCTTT+GGG | + | chr7_1:71336713-71336732 | Msa1035530:CDS | 25.0% |
| !!! | ATGGTGTCTTGTTTTCATTT+TGG | - | chr7_1:71331960-71331979 | None:intergenic | 30.0% |
| AAAATTGGAATCTCTGGTAT+AGG | - | chr7_1:71332135-71332154 | None:intergenic | 30.0% | |
| !! | TGAATTTTTAGGGAGAGAAT+TGG | + | chr7_1:71332185-71332204 | Msa1035530:intron | 30.0% |
| ! | GTCTAGATTTTCAATGTTTG+TGG | + | chr7_1:71332511-71332530 | Msa1035530:intron | 30.0% |
| AATTAACAACCATATCATGC+CGG | + | chr7_1:71332632-71332651 | Msa1035530:intron | 30.0% | |
| !! | TGGCTAGAATTCACTTTTAA+GGG | + | chr7_1:71332726-71332745 | Msa1035530:intron | 30.0% |
| ! | GGGGACAATATTTTCTTTTA+CGG | + | chr7_1:71332911-71332930 | Msa1035530:intron | 30.0% |
| TGGATGGAAAATGATGTAAT+TGG | + | chr7_1:71332941-71332960 | Msa1035530:intron | 30.0% | |
| TCTCTTAACACCTAACAAAT+TGG | + | chr7_1:71333121-71333140 | Msa1035530:intron | 30.0% | |
| AAAAAGTTCATTGTGAACAC+GGG | - | chr7_1:71333480-71333499 | None:intergenic | 30.0% | |
| ! | CTTAGTTTGACTCGTTAATT+AGG | + | chr7_1:71333539-71333558 | Msa1035530:intron | 30.0% |
| CACATATAGTTCAGTTCATT+TGG | - | chr7_1:71333920-71333939 | None:intergenic | 30.0% | |
| GGGCCAATTTAAGTAAAATT+TGG | - | chr7_1:71334156-71334175 | None:intergenic | 30.0% | |
| TGTACAAAGTTTCATGTAGT+AGG | - | chr7_1:71334210-71334229 | None:intergenic | 30.0% | |
| ACTAGTTACAGTAGGAAATA+CGG | + | chr7_1:71334229-71334248 | Msa1035530:intron | 30.0% | |
| ! | TGTCCCTTTGTTATATATAG+GGG | + | chr7_1:71334302-71334321 | Msa1035530:intron | 30.0% |
| AAGCCCCTATATATAACAAA+GGG | - | chr7_1:71334308-71334327 | None:intergenic | 30.0% | |
| ! | TCTCATGATTTTGTTACGTA+AGG | + | chr7_1:71334330-71334349 | Msa1035530:intron | 30.0% |
| ! | CTCATGATTTTGTTACGTAA+GGG | + | chr7_1:71334331-71334350 | Msa1035530:intron | 30.0% |
| ! | TATTTTGTCAAGTAGTCTAG+TGG | + | chr7_1:71334386-71334405 | Msa1035530:intron | 30.0% |
| !! | CTCTTTTTAAGGAGAATAAG+TGG | + | chr7_1:71334418-71334437 | Msa1035530:intron | 30.0% |
| !! | CTTTTTAAGGAGAATAAGTG+GGG | + | chr7_1:71334420-71334439 | Msa1035530:intron | 30.0% |
| CTCGAGAAAATTAATATGGT+TGG | - | chr7_1:71334522-71334541 | None:intergenic | 30.0% | |
| !!! | GAAAATACATATTTTTGGGG+TGG | + | chr7_1:71334592-71334611 | Msa1035530:intron | 30.0% |
| TGCATAATATACGCAAAGTT+CGG | + | chr7_1:71335253-71335272 | Msa1035530:intron | 30.0% | |
| !!! | TTAGGGATGACTTTTTTTGT+TGG | - | chr7_1:71335296-71335315 | None:intergenic | 30.0% |
| CATGCCCAATCATATAAAAA+GGG | + | chr7_1:71335391-71335410 | Msa1035530:intron | 30.0% | |
| GACAAAAAAATCCATTGCTT+TGG | - | chr7_1:71335785-71335804 | None:intergenic | 30.0% | |
| GTCCTCAAAATTAGTCATTT+AGG | + | chr7_1:71335802-71335821 | Msa1035530:intron | 30.0% | |
| ! | ACCCTAAATGACTAATTTTG+AGG | - | chr7_1:71335807-71335826 | None:intergenic | 30.0% |
| CGAATATTAGACCTACAAAT+TGG | - | chr7_1:71335857-71335876 | None:intergenic | 30.0% | |
| TGACGGGAAAAAGTTATTAT+TGG | + | chr7_1:71335918-71335937 | Msa1035530:intron | 30.0% | |
| GAAGTAGGATGTATTTATAG+AGG | - | chr7_1:71336258-71336277 | None:intergenic | 30.0% | |
| AAATACATCCTACTTCTCAA+AGG | + | chr7_1:71336262-71336281 | Msa1035530:intron | 30.0% | |
| CACAATTTGCAACATAAATC+GGG | + | chr7_1:71336520-71336539 | Msa1035530:CDS | 30.0% | |
| CGTGATTACAATAATATCGA+TGG | + | chr7_1:71336704-71336723 | Msa1035530:CDS | 30.0% | |
| CAATAATATCGATGGATCTT+TGG | + | chr7_1:71336712-71336731 | Msa1035530:CDS | 30.0% | |
| ATAATATCGATGGATCTTTG+GGG | + | chr7_1:71336714-71336733 | Msa1035530:CDS | 30.0% | |
| AAAACTCTTCGTGAAAATCG+TGG | - | chr7_1:71332009-71332028 | None:intergenic | 35.0% | |
| TCATGTATGGATGAAAACGA+CGG | - | chr7_1:71332110-71332129 | None:intergenic | 35.0% | |
| TAAAGACGAGTAGGGAAAAT+TGG | - | chr7_1:71332150-71332169 | None:intergenic | 35.0% | |
| TGTTATGGTAAAGACGAGTA+GGG | - | chr7_1:71332158-71332177 | None:intergenic | 35.0% | |
| TTGTTATGGTAAAGACGAGT+AGG | - | chr7_1:71332159-71332178 | None:intergenic | 35.0% | |
| TCTTTCTTTGATTGACAAGC+CGG | + | chr7_1:71332212-71332231 | Msa1035530:CDS | 35.0% | |
| ! | GGTGATAGTACGTTTGAAAT+AGG | + | chr7_1:71332273-71332292 | Msa1035530:intron | 35.0% |
| TAAAAGTGAATTCTAGCCAC+CGG | - | chr7_1:71332725-71332744 | None:intergenic | 35.0% | |
| !! | GTGGCTAGAATTCACTTTTA+AGG | + | chr7_1:71332725-71332744 | Msa1035530:intron | 35.0% |
| !! | GGCTAGAATTCACTTTTAAG+GGG | + | chr7_1:71332727-71332746 | Msa1035530:intron | 35.0% |
| !! | TCACTTTTAAGGGGAATAAG+AGG | + | chr7_1:71332736-71332755 | Msa1035530:intron | 35.0% |
| CATTGCATTGTTATATGCAG+AGG | - | chr7_1:71332783-71332802 | None:intergenic | 35.0% | |
| ! | CATCATTTTCCATCCAGAAA+CGG | - | chr7_1:71332937-71332956 | None:intergenic | 35.0% |
| TTAGGTGTTAAGAGATGTTG+GGG | - | chr7_1:71333116-71333135 | None:intergenic | 35.0% | |
| GTTAGGTGTTAAGAGATGTT+GGG | - | chr7_1:71333117-71333136 | None:intergenic | 35.0% | |
| TGTTAGGTGTTAAGAGATGT+TGG | - | chr7_1:71333118-71333137 | None:intergenic | 35.0% | |
| !! | ACAGTTAGATTGCTTTTCTG+TGG | + | chr7_1:71333382-71333401 | Msa1035530:intron | 35.0% |
| ! | TTTTCAACTGAACCAAATCG+AGG | - | chr7_1:71333452-71333471 | None:intergenic | 35.0% |
| ! | TAGTTCAAGTTTAGCTCACT+TGG | + | chr7_1:71334056-71334075 | Msa1035530:intron | 35.0% |
| TCGACTCAATGATTACGTTT+AGG | - | chr7_1:71334130-71334149 | None:intergenic | 35.0% | |
| !! | ACAAGGGTTGGTAATAAACT+GGG | - | chr7_1:71334176-71334195 | None:intergenic | 35.0% |
| CTTTGTACACTAGTTACAGT+AGG | + | chr7_1:71334221-71334240 | Msa1035530:intron | 35.0% | |
| CTAGTTACAGTAGGAAATAC+GGG | + | chr7_1:71334230-71334249 | Msa1035530:intron | 35.0% | |
| AATGGTGATATATGGTTGGA+TGG | - | chr7_1:71334257-71334276 | None:intergenic | 35.0% | |
| GAGATATGCCCCTAAAAAAA+TGG | - | chr7_1:71334275-71334294 | None:intergenic | 35.0% | |
| GAAGCCCCTATATATAACAA+AGG | - | chr7_1:71334309-71334328 | None:intergenic | 35.0% | |
| GCATAATATACGCAAAGTTC+GGG | + | chr7_1:71335254-71335273 | Msa1035530:intron | 35.0% | |
| !!! | TGACTTTTTTTGTTGGTGTC+CGG | - | chr7_1:71335289-71335308 | None:intergenic | 35.0% |
| TATATGATTGGGCATGGTAT+TGG | - | chr7_1:71335387-71335406 | None:intergenic | 35.0% | |
| ! | CCTTTTTATATGATTGGGCA+TGG | - | chr7_1:71335393-71335412 | None:intergenic | 35.0% |
| CCATGCCCAATCATATAAAA+AGG | + | chr7_1:71335390-71335409 | Msa1035530:intron | 35.0% | |
| ATAGAGGATGTTTCAAGGTA+GGG | - | chr7_1:71336242-71336261 | None:intergenic | 35.0% | |
| TATAGAGGATGTTTCAAGGT+AGG | - | chr7_1:71336243-71336262 | None:intergenic | 35.0% | |
| !!! | GAGGGAATTGGTTTTTAGAT+TGG | - | chr7_1:71336344-71336363 | None:intergenic | 35.0% |
| TCTCATCATCTGATTCAGAT+AGG | - | chr7_1:71336394-71336413 | None:intergenic | 35.0% | |
| TGCAAATTGTGTATGTGCTT+TGG | - | chr7_1:71336511-71336530 | None:intergenic | 35.0% | |
| AACAACATAGTGTGTGATGA+AGG | - | chr7_1:71336596-71336615 | None:intergenic | 35.0% | |
| !! | ACTATGTTGTTTCCTATGCA+TGG | + | chr7_1:71336605-71336624 | Msa1035530:CDS | 35.0% |
| !! | CTAATCAAGGTTGATGTCAT+TGG | - | chr7_1:71336828-71336847 | None:intergenic | 35.0% |
| GGTGGTATGAATGTTGTCAA+TGG | - | chr7_1:71331979-71331998 | None:intergenic | 40.0% | |
| AACATAGTGTGAGATGAAGG+TGG | - | chr7_1:71332060-71332079 | None:intergenic | 40.0% | |
| GGAAACATAGTGTGAGATGA+AGG | - | chr7_1:71332063-71332082 | None:intergenic | 40.0% | |
| TAATTACCACGTCCATGCAT+GGG | - | chr7_1:71332084-71332103 | None:intergenic | 40.0% | |
| ATAATTACCACGTCCATGCA+TGG | - | chr7_1:71332085-71332104 | None:intergenic | 40.0% | |
| CATGTATGGATGAAAACGAC+GGG | - | chr7_1:71332109-71332128 | None:intergenic | 40.0% | |
| !! | GTCGTTTTCATCCATACATG+AGG | + | chr7_1:71332109-71332128 | Msa1035530:CDS | 40.0% |
| GTAGGGAAAATTGGAATCTC+TGG | - | chr7_1:71332141-71332160 | None:intergenic | 40.0% | |
| !! | TTTGTTGTTGTTGCTGTTGC+TGG | - | chr7_1:71332304-71332323 | None:intergenic | 40.0% |
| ! | CGACAATGATTTGAAGCTCT+AGG | + | chr7_1:71332335-71332354 | Msa1035530:intron | 40.0% |
| !! | TGAAGCTCTAGGTTGATCTA+TGG | + | chr7_1:71332346-71332365 | Msa1035530:intron | 40.0% |
| TCTGATTGAAAACCTCAGAC+CGG | - | chr7_1:71332654-71332673 | None:intergenic | 40.0% | |
| ! | GTTTTTATCTAGTTGTCCGG+TGG | + | chr7_1:71332706-71332725 | Msa1035530:intron | 40.0% |
| !! | TAAGGGGAATAAGAGGTGTT+TGG | + | chr7_1:71332743-71332762 | Msa1035530:intron | 40.0% |
| !! | AAGGGGAATAAGAGGTGTTT+GGG | + | chr7_1:71332744-71332763 | Msa1035530:intron | 40.0% |
| ! | TTTTCTTTTACGGCCGTTTC+TGG | + | chr7_1:71332921-71332940 | Msa1035530:intron | 40.0% |
| GGGGCTTACTTTGAATTTGT+AGG | - | chr7_1:71333097-71333116 | None:intergenic | 40.0% | |
| GGTCGATAGTACTAGAAATG+AGG | + | chr7_1:71333403-71333422 | Msa1035530:intron | 40.0% | |
| ! | CGTGTGAACATTAAGAGTGT+CGG | - | chr7_1:71333516-71333535 | None:intergenic | 40.0% |
| TGCGTGAATGATTACACACA+CGG | - | chr7_1:71333853-71333872 | None:intergenic | 40.0% | |
| !! | CACAAGGGTTGGTAATAAAC+TGG | - | chr7_1:71334177-71334196 | None:intergenic | 40.0% |
| CAGTTTATTACCAACCCTTG+TGG | + | chr7_1:71334175-71334194 | Msa1035530:intron | 40.0% | |
| TATTACCAACCCTTGTGGTT+AGG | + | chr7_1:71334180-71334199 | Msa1035530:intron | 40.0% | |
| TGTTACGTAAGGGACTTCTA+TGG | + | chr7_1:71334341-71334360 | Msa1035530:intron | 40.0% | |
| GTTACGTAAGGGACTTCTAT+GGG | + | chr7_1:71334342-71334361 | Msa1035530:intron | 40.0% | |
| AAGGTATGAGGTTCAAACTC+AGG | - | chr7_1:71334872-71334891 | None:intergenic | 40.0% | |
| !!! | ACTTTTTTTGTTGGTGTCCG+GGG | - | chr7_1:71335287-71335306 | None:intergenic | 40.0% |
| !!! | GACTTTTTTTGTTGGTGTCC+GGG | - | chr7_1:71335288-71335307 | None:intergenic | 40.0% |
| ! | TCATGATGGTGAGATATGGT+TGG | - | chr7_1:71335495-71335514 | None:intergenic | 40.0% |
| ! | CCAATCATGATGGTGAGATA+TGG | - | chr7_1:71335499-71335518 | None:intergenic | 40.0% |
| CCATATCTCACCATCATGAT+TGG | + | chr7_1:71335496-71335515 | Msa1035530:intron | 40.0% | |
| TTGAATGCACGTACGTGTAA+TGG | - | chr7_1:71336147-71336166 | None:intergenic | 40.0% | |
| ! | TTCAAGGTAGGGCATGATTT+TGG | - | chr7_1:71336231-71336250 | None:intergenic | 40.0% |
| AGAAGCTAGAGAAATGTGGT+GGG | - | chr7_1:71336290-71336309 | None:intergenic | 40.0% | |
| AAGAAGCTAGAGAAATGTGG+TGG | - | chr7_1:71336291-71336310 | None:intergenic | 40.0% | |
| TGCAAGAAGCTAGAGAAATG+TGG | - | chr7_1:71336294-71336313 | None:intergenic | 40.0% | |
| ACCAATTCCCTCACTGAAAA+TGG | + | chr7_1:71336352-71336371 | Msa1035530:intron | 40.0% | |
| ! | TCCATTTTCAGTGAGGGAAT+TGG | - | chr7_1:71336356-71336375 | None:intergenic | 40.0% |
| ! | TCTGACTCCATTTTCAGTGA+GGG | - | chr7_1:71336362-71336381 | None:intergenic | 40.0% |
| ! | ATCTGACTCCATTTTCAGTG+AGG | - | chr7_1:71336363-71336382 | None:intergenic | 40.0% |
| ! | TTCTGAAGGTTTCATGGCAA+TGG | - | chr7_1:71336466-71336485 | None:intergenic | 40.0% |
| CTAAACAACACACACCACAT+TGG | + | chr7_1:71336554-71336573 | Msa1035530:CDS | 40.0% | |
| AACATAGTGTGTGATGAAGG+TGG | - | chr7_1:71336593-71336612 | None:intergenic | 40.0% | |
| TTGTTTCCTATGCATGGAAG+CGG | + | chr7_1:71336611-71336630 | Msa1035530:CDS | 40.0% | |
| TAATTACCGCTTCCATGCAT+AGG | - | chr7_1:71336620-71336639 | None:intergenic | 40.0% | |
| TCATGTATGGATGAAAACGG+CGG | - | chr7_1:71336646-71336665 | None:intergenic | 40.0% | |
| GCCTCATGTATGGATGAAAA+CGG | - | chr7_1:71332113-71332132 | None:intergenic | 40.0% | |
| ACAATTGGAACCTCTGGTAT+AGG | - | chr7_1:71336671-71336690 | None:intergenic | 40.0% | |
| TCAGTTGGAGCTGAATCAAT+CGG | - | chr7_1:71336773-71336792 | None:intergenic | 40.0% | |
| TCCAACTGAAGAATTACCAG+TGG | + | chr7_1:71336784-71336803 | Msa1035530:CDS | 40.0% | |
| ACCACTGGTAATTCTTCAGT+TGG | - | chr7_1:71336788-71336807 | None:intergenic | 40.0% | |
| !!! | AGAGTTTTTTCACGCCGCAA+TGG | + | chr7_1:71332021-71332040 | Msa1035530:CDS | 45.0% |
| ATAGTGTGAGATGAAGGTGG+TGG | - | chr7_1:71332057-71332076 | None:intergenic | 45.0% | |
| CACACTATGTTTCCCATGCA+TGG | + | chr7_1:71332069-71332088 | Msa1035530:CDS | 45.0% | |
| TCTGGTATAGGCCTCATGTA+TGG | - | chr7_1:71332123-71332142 | None:intergenic | 45.0% | |
| ATTGTTATATGCAGAGGCCG+GGG | - | chr7_1:71332777-71332796 | None:intergenic | 45.0% | |
| CATTGTTATATGCAGAGGCC+GGG | - | chr7_1:71332778-71332797 | None:intergenic | 45.0% | |
| GCATTGTTATATGCAGAGGC+CGG | - | chr7_1:71332779-71332798 | None:intergenic | 45.0% | |
| TGAGCATATCTCAGTTGGCA+GGG | - | chr7_1:71332808-71332827 | None:intergenic | 45.0% | |
| TGCCAACTGAGATATGCTCA+CGG | + | chr7_1:71332808-71332827 | Msa1035530:intron | 45.0% | |
| TGCATATCCAACCATCCAAC+TGG | + | chr7_1:71333270-71333289 | Msa1035530:intron | 45.0% | |
| GTTACTACGTGGAATCCAGT+TGG | - | chr7_1:71333288-71333307 | None:intergenic | 45.0% | |
| ACGTTAACGCAGTTACTACG+TGG | - | chr7_1:71333299-71333318 | None:intergenic | 45.0% | |
| GAACTCGTCTAACCTCGATT+TGG | + | chr7_1:71333437-71333456 | Msa1035530:intron | 45.0% | |
| TGTAATCATTCACGCACTCG+TGG | + | chr7_1:71333857-71333876 | Msa1035530:intron | 45.0% | |
| GTAATCATTCACGCACTCGT+GGG | + | chr7_1:71333858-71333877 | Msa1035530:intron | 45.0% | |
| TAAGCTCACGGGGACAATTA+GGG | - | chr7_1:71335214-71335233 | None:intergenic | 45.0% | |
| TACCAACTGAGCTAAGCTCA+CGG | - | chr7_1:71334465-71334484 | None:intergenic | 45.0% | |
| TCAGATGATGAGAGCAGTAC+TGG | + | chr7_1:71336401-71336420 | Msa1035530:CDS | 45.0% | |
| TGGCAATGGTTGCATGGAAT+AGG | - | chr7_1:71336452-71336471 | None:intergenic | 45.0% | |
| GTTTCATGGCAATGGTTGCA+TGG | - | chr7_1:71336458-71336477 | None:intergenic | 45.0% | |
| !! | GTGCAGTTCTGAAGGTTTCA+TGG | - | chr7_1:71336472-71336491 | None:intergenic | 45.0% |
| ! | AAGATCTCGTGCAGTTCTGA+AGG | - | chr7_1:71336480-71336499 | None:intergenic | 45.0% |
| GAACTGCACGAGATCTTTCT+TGG | + | chr7_1:71336483-71336502 | Msa1035530:CDS | 45.0% | |
| ATAGTGTGTGATGAAGGTGG+TGG | - | chr7_1:71336590-71336609 | None:intergenic | 45.0% | |
| !! | GCCGTTTTCATCCATACATG+AGG | + | chr7_1:71336645-71336664 | Msa1035530:CDS | 45.0% |
| TCTGGTATAGGCCTCATGTA+TGG | - | chr7_1:71332123-71332142 | None:intergenic | 45.0% | |
| ATACATGAGGCCTATACCAG+AGG | + | chr7_1:71332122-71332141 | Msa1035530:CDS | 45.0% | |
| CGATCAGTACGAGAGACAAT+TGG | - | chr7_1:71336686-71336705 | None:intergenic | 45.0% | |
| ! | TGGATCTTTGGGGAGAACAA+TGG | + | chr7_1:71336724-71336743 | Msa1035530:CDS | 45.0% |
| CTGAAGAATTACCAGTGGTG+TGG | + | chr7_1:71336789-71336808 | Msa1035530:CDS | 45.0% | |
| AAGAATTACCAGTGGTGTGG+CGG | + | chr7_1:71336792-71336811 | Msa1035530:CDS | 45.0% | |
| !! | AAAAAATTTATTTATCAAAA+AGG | + | chr7_1:71333599-71333618 | Msa1035530:intron | 5.0% |
| !!! | ATTTAATTTTTCTTTTAAAA+AGG | + | chr7_1:71333647-71333666 | Msa1035530:intron | 5.0% |
| !!! | TTTATATTTATTTTTTTCAA+TGG | - | chr7_1:71334728-71334747 | None:intergenic | 5.0% |
| !!! | TATATATTTTTTTTTTTACA+AGG | - | chr7_1:71334961-71334980 | None:intergenic | 5.0% |
| !! | ATTATTATTAAAATTAACTA+TGG | - | chr7_1:71335106-71335125 | None:intergenic | 5.0% |
| !! | GAAAATCGTGGTGTTGCTGG+TGG | - | chr7_1:71331997-71332016 | None:intergenic | 50.0% |
| !! | CGTGAAAATCGTGGTGTTGC+TGG | - | chr7_1:71332000-71332019 | None:intergenic | 50.0% |
| ! | TGAGATGAAGGTGGTGGTAG+TGG | - | chr7_1:71332051-71332070 | None:intergenic | 50.0% |
| ATGTTTCCCATGCATGGACG+TGG | + | chr7_1:71332075-71332094 | Msa1035530:CDS | 50.0% | |
| TCAGTTGGAGCAAGATCAGC+CGG | - | chr7_1:71332234-71332253 | None:intergenic | 50.0% | |
| AACCATATCATGCCGGTCTG+AGG | + | chr7_1:71332639-71332658 | Msa1035530:intron | 50.0% | |
| AACCTCAGACCGGCATGATA+TGG | - | chr7_1:71332644-71332663 | None:intergenic | 50.0% | |
| GTGAGCATATCTCAGTTGGC+AGG | - | chr7_1:71332809-71332828 | None:intergenic | 50.0% | |
| GCCAACTGAGATATGCTCAC+GGG | + | chr7_1:71332809-71332828 | Msa1035530:intron | 50.0% | |
| TCCCGTGAGCATATCTCAGT+TGG | - | chr7_1:71332813-71332832 | None:intergenic | 50.0% | |
| !! | CTTTTACGGCCGTTTCTGGA+TGG | + | chr7_1:71332925-71332944 | Msa1035530:intron | 50.0% |
| GTGGAATCCAGTTGGATGGT+TGG | - | chr7_1:71333280-71333299 | None:intergenic | 50.0% | |
| CTACGTGGAATCCAGTTGGA+TGG | - | chr7_1:71333284-71333303 | None:intergenic | 50.0% | |
| CAGCTCAAGTGCAGCTCATT+TGG | + | chr7_1:71334096-71334115 | Msa1035530:intron | 50.0% | |
| GTAGGCGATCCTAACCACAA+GGG | - | chr7_1:71334192-71334211 | None:intergenic | 50.0% | |
| AGTAGGCGATCCTAACCACA+AGG | - | chr7_1:71334193-71334212 | None:intergenic | 50.0% | |
| AGGAGAATAAGTGGGGTCTC+AGG | + | chr7_1:71334427-71334446 | Msa1035530:intron | 50.0% | |
| GGAGAATAAGTGGGGTCTCA+GGG | + | chr7_1:71334428-71334447 | Msa1035530:intron | 50.0% | |
| GAGAATAAGTGGGGTCTCAG+GGG | + | chr7_1:71334429-71334448 | Msa1035530:intron | 50.0% | |
| TCTCGTGAGCTTAGCTCAGT+TGG | - | chr7_1:71334470-71334489 | None:intergenic | 50.0% | |
| AAGCTCACGGGGACAATTAG+GGG | - | chr7_1:71335213-71335232 | None:intergenic | 50.0% | |
| CTAAGCTCACGGGGACAATT+AGG | - | chr7_1:71335215-71335234 | None:intergenic | 50.0% | |
| ACCAACTGAGCTAAGCTCAC+GGG | - | chr7_1:71334466-71334485 | None:intergenic | 50.0% | |
| AAAGTTCGGGATTCGAACCC+CGG | + | chr7_1:71335267-71335286 | Msa1035530:intron | 50.0% | |
| ! | GGTGGGTACCTTTGAGAAGT+AGG | - | chr7_1:71336273-71336292 | None:intergenic | 50.0% |
| !! | TGTGATGAAGGTGGTGGAGA+TGG | - | chr7_1:71336584-71336603 | None:intergenic | 50.0% |
| CGAGAGACAATTGGAACCTC+TGG | - | chr7_1:71336677-71336696 | None:intergenic | 50.0% | |
| AGAATTACCAGTGGTGTGGC+GGG | + | chr7_1:71336793-71336812 | Msa1035530:CDS | 50.0% | |
| !! | GTGGTAGTGGTGGTCCATTG+CGG | - | chr7_1:71332038-71332057 | None:intergenic | 55.0% |
| !! | GATGAAGGTGGTGGTAGTGG+TGG | - | chr7_1:71332048-71332067 | None:intergenic | 55.0% |
| GGCTGATCTTGCTCCAACTG+AGG | + | chr7_1:71332233-71332252 | Msa1035530:CDS | 55.0% | |
| TGCTCCAACTGAGGAACGAC+CGG | + | chr7_1:71332242-71332261 | Msa1035530:CDS | 55.0% | |
| GTACTATCACCCCACACCAC+CGG | - | chr7_1:71332264-71332283 | None:intergenic | 55.0% | |
| ! | GGTGTTTGGGATTCGAACCC+CGG | + | chr7_1:71332757-71332776 | Msa1035530:intron | 55.0% |
| GCGATCCTAACCACAAGGGT+TGG | - | chr7_1:71334188-71334207 | None:intergenic | 55.0% | |
| CGTAAGGGACTTCTATGGGC+TGG | + | chr7_1:71334346-71334365 | Msa1035530:intron | 55.0% | |
| CCAACTGAGCTAAGCTCACG+GGG | - | chr7_1:71334467-71334486 | None:intergenic | 55.0% | |
| ! | GTGGAGATGGTGGTCCAATG+TGG | - | chr7_1:71336571-71336590 | None:intergenic | 55.0% |
| !! | GATGAAGGTGGTGGAGATGG+TGG | - | chr7_1:71336581-71336600 | None:intergenic | 55.0% |
| TCCAACTGAGGAACGACCGG+TGG | + | chr7_1:71332245-71332264 | Msa1035530:CDS | 60.0% | |
| ACCACCGGTCGTTCCTCAGT+TGG | - | chr7_1:71332249-71332268 | None:intergenic | 60.0% | |
| TGAGGAACGACCGGTGGTGT+GGG | + | chr7_1:71332251-71332270 | Msa1035530:CDS | 60.0% | |
| CCCCGTGAGCTTAGCTCAGT+TGG | + | chr7_1:71335221-71335240 | Msa1035530:intron | 60.0% | |
| ! | TTACCAGTGGTGTGGCGGGA+TGG | + | chr7_1:71336797-71336816 | Msa1035530:CDS | 60.0% |
| CTGAGGAACGACCGGTGGTG+TGG | + | chr7_1:71332250-71332269 | Msa1035530:CDS | 65.0% | |
| GAGGAACGACCGGTGGTGTG+GGG | + | chr7_1:71332252-71332271 | Msa1035530:CDS | 65.0% | |
| CTTCCATCCCGCCACACCAC+TGG | - | chr7_1:71336803-71336822 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 71331946 | 71336847 | 71331946 | ID=Msa1035530;Name=Msa1035530 |
| chr7_1 | mRNA | 71331946 | 71336847 | 71331946 | ID=Msa1035530-mRNA-1;Parent=Msa1035530;Name=Msa1035530-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|0|0|3|0|255 |
| chr7_1 | exon | 71331946 | 71332162 | 71331946 | ID=Msa1035530-mRNA-1:exon:17251;Parent=Msa1035530-mRNA-1 |
| chr7_1 | exon | 71332196 | 71332279 | 71332196 | ID=Msa1035530-mRNA-1:exon:17252;Parent=Msa1035530-mRNA-1 |
| chr7_1 | exon | 71336381 | 71336847 | 71336381 | ID=Msa1035530-mRNA-1:exon:17253;Parent=Msa1035530-mRNA-1 |
| chr7_1 | CDS | 71331946 | 71332162 | 71331946 | ID=Msa1035530-mRNA-1:cds;Parent=Msa1035530-mRNA-1 |
| chr7_1 | CDS | 71332196 | 71332279 | 71332196 | ID=Msa1035530-mRNA-1:cds;Parent=Msa1035530-mRNA-1 |
| chr7_1 | CDS | 71336381 | 71336847 | 71336381 | ID=Msa1035530-mRNA-1:cds;Parent=Msa1035530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
