AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1036730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036730 MtrunA17_Chr7g0261281 95.714 280 6 2 1 276 1 278 0.0 550
Msa1036730 MtrunA17_Chr1g0187761 46.931 277 127 4 1 276 1 258 3.90e-78 237
Msa1036730 MtrunA17_Chr1g0167661 46.809 282 116 7 1 276 1 254 5.72e-78 236
Msa1036730 MtrunA17_Chr1g0167691 47.535 284 112 5 1 276 1 255 1.09e-76 233
Msa1036730 MtrunA17_Chr7g0274581 74.167 120 31 0 1 120 1 120 7.50e-71 217
Msa1036730 MtrunA17_Chr4g0039971 76.271 118 28 0 1 118 2 119 1.03e-64 206
Msa1036730 MtrunA17_Chr2g0323411 75.000 116 29 0 1 116 1 116 1.65e-62 199
Msa1036730 MtrunA17_Chr8g0346561 63.158 133 49 0 1 133 1 133 5.49e-62 197
Msa1036730 MtrunA17_Chr8g0349261 55.319 188 63 6 1 176 1 179 6.25e-62 197
Msa1036730 MtrunA17_Chr1g0203411 45.133 226 97 2 1 199 1 226 2.04e-61 196
Msa1036730 MtrunA17_Chr7g0217741 71.552 116 33 0 1 116 1 116 8.87e-61 194
Msa1036730 MtrunA17_Chr4g0042671 73.276 116 31 0 1 116 1 116 1.43e-60 197
Msa1036730 MtrunA17_Chr3g0115821 70.339 118 35 0 1 118 1 118 1.44e-60 195
Msa1036730 MtrunA17_Chr2g0281071 72.650 117 31 1 1 116 1 117 1.75e-60 195
Msa1036730 MtrunA17_Chr4g0048511 71.795 117 32 1 1 116 1 117 7.92e-60 194
Msa1036730 MtrunA17_Chr7g0275911 66.393 122 40 1 1 122 1 121 2.00e-59 189
Msa1036730 MtrunA17_Chr3g0131121 65.414 133 40 1 1 127 1 133 7.12e-59 189
Msa1036730 MtrunA17_Chr6g0453471 69.828 116 35 0 1 116 1 116 2.56e-58 189
Msa1036730 MtrunA17_Chr5g0410961 69.828 116 35 0 1 116 1 116 1.25e-57 187
Msa1036730 MtrunA17_Chr4g0070611 63.158 133 48 1 1 132 1 133 1.93e-57 186
Msa1036730 MtrunA17_Chr4g0068061 67.241 116 38 0 1 116 1 116 3.40e-57 186
Msa1036730 MtrunA17_Chr3g0121241 44.298 228 103 4 5 208 35 262 4.20e-57 185
Msa1036730 MtrunA17_Chr4g0022931 65.891 129 43 1 1 128 1 129 4.72e-57 184
Msa1036730 MtrunA17_Chr5g0434571 50.811 185 69 3 1 163 37 221 5.53e-57 186
Msa1036730 MtrunA17_Chr4g0070641 63.158 133 48 1 1 132 1 133 8.30e-57 180
Msa1036730 MtrunA17_Chr5g0395281 67.797 118 38 0 1 118 1 118 1.78e-56 183
Msa1036730 MtrunA17_Chr3g0110351 69.828 116 35 0 1 116 1 116 3.54e-56 183
Msa1036730 MtrunA17_Chr4g0022901 40.433 277 142 6 1 260 1 271 4.65e-56 181
Msa1036730 MtrunA17_Chr4g0037141 54.717 159 58 2 1 145 1 159 6.39e-56 181
Msa1036730 MtrunA17_Chr2g0311221 70.000 110 33 0 2 111 4 113 1.19e-55 182
Msa1036730 MtrunA17_Chr4g0022911 64.122 131 44 2 1 128 1 131 1.68e-55 180
Msa1036730 MtrunA17_Chr7g0217221 62.903 124 46 0 1 124 1 124 2.03e-55 179
Msa1036730 MtrunA17_Chr4g0057031 68.966 116 36 0 1 116 1 116 2.53e-55 179
Msa1036730 MtrunA17_Chr2g0323351 62.595 131 49 0 1 131 1 131 3.04e-55 178
Msa1036730 MtrunA17_Chr7g0228891 61.314 137 53 0 1 137 1 137 1.11e-54 177
Msa1036730 MtrunA17_Chr7g0270891 66.949 118 39 0 1 118 1 118 1.12e-54 181
Msa1036730 MtrunA17_Chr4g0060721 61.667 120 46 0 1 120 2 121 1.44e-54 179
Msa1036730 MtrunA17_Chr1g0193801 66.102 118 40 0 1 118 1 118 5.15e-54 179
Msa1036730 MtrunA17_Chr8g0385321 66.379 116 39 0 1 116 1 116 1.99e-53 176
Msa1036730 MtrunA17_Chr7g0254411 64.655 116 41 0 1 116 1 116 4.03e-53 176
Msa1036730 MtrunA17_Chr3g0092401 62.931 116 43 0 1 116 2 117 1.36e-52 174
Msa1036730 MtrunA17_Chr4g0058631 64.655 116 41 0 1 116 1 116 2.76e-52 174
Msa1036730 MtrunA17_Chr1g0194951 63.793 116 42 0 1 116 1 116 6.25e-52 174
Msa1036730 MtrunA17_Chr1g0193371 63.866 119 43 0 1 119 1 119 6.84e-52 173
Msa1036730 MtrunA17_Chr4g0022891 65.487 113 39 0 1 113 1 113 1.17e-50 166
Msa1036730 MtrunA17_Chr6g0453211 63.964 111 40 0 1 111 1 111 2.95e-50 167
Msa1036730 MtrunA17_Chr3g0117091 63.793 116 42 0 1 116 1 116 3.81e-50 168
Msa1036730 MtrunA17_Chr1g0151941 59.829 117 46 1 1 116 1 117 8.72e-50 164
Msa1036730 MtrunA17_Chr4g0022881 63.158 114 42 0 1 114 1 114 1.31e-49 163
Msa1036730 MtrunA17_Chr5g0435101 56.911 123 53 0 3 125 2 124 1.54e-49 162
Msa1036730 MtrunA17_Chr3g0103281 62.069 116 44 0 1 116 1 116 7.05e-49 164
Msa1036730 MtrunA17_Chr7g0269831 65.517 116 40 0 1 116 1 116 1.10e-48 165
Msa1036730 MtrunA17_Chr7g0271241 64.815 108 38 0 1 108 1 108 1.96e-48 165
Msa1036730 MtrunA17_Chr1g0211161 62.281 114 43 0 3 116 4 117 2.84e-48 160
Msa1036730 MtrunA17_Chr5g0400821 50.641 156 63 2 1 155 1 143 3.05e-48 162
Msa1036730 MtrunA17_Chr2g0309911 61.261 111 43 0 6 116 5 115 5.59e-48 162
Msa1036730 MtrunA17_Chr6g0452271 58.621 116 48 0 1 116 1 116 1.32e-47 161
Msa1036730 MtrunA17_Chr4g0044421 58.065 124 51 1 3 125 2 125 1.36e-47 157
Msa1036730 MtrunA17_Chr2g0330041 59.483 116 47 0 1 116 1 116 1.40e-47 163
Msa1036730 MtrunA17_Chr3g0135311 55.303 132 58 1 1 131 1 132 4.53e-47 160
Msa1036730 MtrunA17_Chr1g0152011 54.545 132 59 1 1 131 1 132 7.28e-47 159
Msa1036730 MtrunA17_Chr8g0342541 57.759 116 49 0 1 116 1 116 7.64e-47 160
Msa1036730 MtrunA17_Chr5g0417821 65.421 107 37 0 10 116 5 111 1.83e-46 157
Msa1036730 MtrunA17_Chr8g0342521 57.759 116 49 0 1 116 1 116 2.71e-46 158
Msa1036730 MtrunA17_Chr4g0028311 44.271 192 99 4 1 184 1 192 5.60e-46 157
Msa1036730 MtrunA17_Chr8g0387421 56.897 116 50 0 1 116 1 116 1.46e-45 155
Msa1036730 MtrunA17_Chr6g0470971 38.290 269 141 8 4 264 6 257 5.89e-45 153
Msa1036730 MtrunA17_Chr4g0072751 62.162 111 41 1 1 110 1 111 6.72e-45 155
Msa1036730 MtrunA17_Chr6g0450101 55.906 127 54 1 1 125 1 127 1.98e-44 149
Msa1036730 MtrunA17_Chr6g0487491 49.032 155 63 3 1 139 1 155 2.90e-44 150
Msa1036730 MtrunA17_Chr7g0264641 54.098 122 55 1 1 121 1 122 4.51e-44 150
Msa1036730 MtrunA17_Chr5g0397231 60.185 108 43 0 1 108 1 108 4.65e-44 152
Msa1036730 MtrunA17_Chr4g0042611 68.182 88 28 0 1 88 1 88 2.18e-43 142
Msa1036730 MtrunA17_Chr8g0354661 63.462 104 38 0 12 115 37 140 2.33e-43 154
Msa1036730 MtrunA17_Chr8g0342481 56.410 117 50 1 1 116 1 117 2.76e-43 152
Msa1036730 MtrunA17_Chr4g0054391 56.154 130 56 1 1 129 1 130 3.33e-43 149
Msa1036730 MtrunA17_Chr4g0032401 61.905 105 40 0 12 116 17 121 7.97e-43 149
Msa1036730 MtrunA17_Chr1g0203441 61.538 104 40 0 13 116 14 117 8.80e-43 147
Msa1036730 MtrunA17_Chr7g0228231 61.682 107 41 0 12 118 14 120 1.33e-42 144
Msa1036730 MtrunA17_Chr5g0434911 56.364 110 48 0 7 116 16 125 2.52e-42 146
Msa1036730 MtrunA17_Chr2g0328771 60.952 105 41 0 12 116 20 124 3.62e-42 147
Msa1036730 MtrunA17_Chr5g0434931 58.491 106 44 0 11 116 34 139 3.71e-42 145
Msa1036730 MtrunA17_Chr1g0154031 61.538 104 40 0 12 115 76 179 4.20e-42 149
Msa1036730 MtrunA17_Chr3g0088461 61.111 108 42 0 9 116 19 126 5.33e-42 147
Msa1036730 MtrunA17_Chr1g0186061 59.223 103 42 0 13 115 21 123 8.33e-42 144
Msa1036730 MtrunA17_Chr3g0099131 57.265 117 46 1 12 124 41 157 9.60e-42 150
Msa1036730 MtrunA17_Chr1g0168661 60.194 103 41 0 13 115 22 124 1.41e-41 143
Msa1036730 MtrunA17_Chr4g0055981 55.462 119 53 0 9 127 52 170 1.56e-41 142
Msa1036730 MtrunA17_Chr1g0209661 60.748 107 42 0 12 118 27 133 2.54e-41 144
Msa1036730 MtrunA17_Chr7g0220341 56.522 115 48 1 10 122 23 137 2.86e-41 143
Msa1036730 MtrunA17_Chr5g0434831 59.434 106 43 0 11 116 6 111 6.74e-41 140
Msa1036730 MtrunA17_Chr3g0080861 59.615 104 42 0 12 115 37 140 7.65e-41 147
Msa1036730 MtrunA17_Chr2g0294811 64.130 92 33 0 1 92 1 92 1.50e-40 136
Msa1036730 MtrunA17_Chr1g0194301 38.384 198 101 3 8 184 29 226 1.56e-40 141
Msa1036730 MtrunA17_Chr8g0343831 61.165 103 40 0 14 116 10 112 1.67e-40 140
Msa1036730 MtrunA17_Chr8g0360111 59.804 102 41 0 11 112 24 125 1.91e-40 140
Msa1036730 MtrunA17_Chr1g0194291 57.407 108 46 0 11 118 20 127 3.22e-40 140
Msa1036730 MtrunA17_Chr1g0180391 50.350 143 65 2 12 151 19 158 4.23e-40 139
Msa1036730 MtrunA17_Chr7g0228991 57.547 106 45 0 11 116 28 133 8.37e-40 139
Msa1036730 MtrunA17_Chr2g0322521 58.879 107 44 0 9 115 26 132 1.34e-39 142
Msa1036730 MtrunA17_Chr7g0240821 60.000 100 40 0 17 116 6 105 1.34e-39 137
Msa1036730 MtrunA17_Chr5g0434841 57.547 106 45 0 11 116 19 124 7.58e-39 138
Msa1036730 MtrunA17_Chr7g0247131 76.712 73 17 0 44 116 10 82 2.78e-37 132
Msa1036730 MtrunA17_Chr4g0068921 59.048 105 43 0 10 114 22 126 1.62e-36 128
Msa1036730 MtrunA17_Chr2g0327821 52.885 104 49 0 12 115 6 109 4.51e-36 129
Msa1036730 MtrunA17_Chr2g0293911 55.856 111 49 0 8 118 20 130 1.32e-35 130
Msa1036730 MtrunA17_Chr5g0395221 62.500 88 33 0 1 88 1 88 1.59e-35 122
Msa1036730 MtrunA17_Chr4g0030881 50.435 115 50 1 13 120 8 122 3.99e-35 127
Msa1036730 MtrunA17_Chr2g0323321 60.870 92 35 1 1 92 1 91 5.53e-35 122
Msa1036730 MtrunA17_Chr1g0192411 51.887 106 51 0 10 115 10 115 1.25e-34 129
Msa1036730 MtrunA17_Chr8g0342511 57.471 87 37 0 1 87 1 87 4.48e-33 116
Msa1036730 MtrunA17_Chr8g0342531 58.333 84 35 0 6 89 6 89 1.03e-32 117
Msa1036730 MtrunA17_Chr8g0334881 50.000 106 51 2 12 116 10 114 1.96e-32 121
Msa1036730 MtrunA17_Chr4g0013361 42.857 126 70 2 8 132 6 130 3.88e-32 120
Msa1036730 MtrunA17_Chr5g0440781 48.544 103 52 1 13 114 13 115 1.31e-31 115
Msa1036730 MtrunA17_Chr3g0099141 57.831 83 35 0 12 94 40 122 3.13e-31 113
Msa1036730 MtrunA17_Chr5g0440761 48.544 103 52 1 13 114 13 115 4.94e-31 116
Msa1036730 MtrunA17_Chr5g0441141 48.544 103 52 1 13 114 13 115 6.14e-31 116
Msa1036730 MtrunA17_Chr8g0342461 55.556 90 39 1 1 89 1 90 1.55e-30 111
Msa1036730 MtrunA17_Chr8g0342471 54.444 90 40 1 1 89 1 90 6.98e-30 109
Msa1036730 MtrunA17_Chr5g0441131 47.573 103 53 1 13 114 10 112 1.27e-29 110
Msa1036730 MtrunA17_Chr4g0008551 50.485 103 48 2 14 115 38 138 1.22e-27 109
Msa1036730 MtrunA17_Chr3g0133601 47.664 107 55 1 9 115 32 137 1.39e-27 106
Msa1036730 MtrunA17_Chr6g0454921 48.148 108 55 1 8 115 9 115 1.87e-27 105
Msa1036730 MtrunA17_Chr7g0229101 65.714 70 24 0 44 113 4 73 1.94e-27 105
Msa1036730 MtrunA17_Chr7g0238631 50.476 105 51 1 12 116 111 214 4.95e-27 109
Msa1036730 MtrunA17_Chr7g0238631 36.000 100 62 2 14 112 61 159 1.36e-13 70.5
Msa1036730 MtrunA17_Chr5g0434901 66.667 66 22 0 48 113 9 74 8.00e-27 101
Msa1036730 MtrunA17_Chr4g0053431 48.113 106 46 2 14 115 5 105 1.23e-26 105
Msa1036730 MtrunA17_Chr3g0139671 47.619 105 54 1 12 116 83 186 1.46e-26 108
Msa1036730 MtrunA17_Chr3g0139671 37.000 100 61 2 14 112 33 131 1.03e-14 73.9
Msa1036730 MtrunA17_Chr7g0229131 53.409 88 41 0 44 131 4 91 3.20e-26 101
Msa1036730 MtrunA17_Chr1g0157731 47.619 105 54 1 12 116 89 192 4.55e-26 107
Msa1036730 MtrunA17_Chr1g0157731 37.000 100 61 2 14 112 39 137 2.47e-14 72.8
Msa1036730 MtrunA17_Chr5g0401731 47.222 108 56 1 8 115 9 115 5.21e-26 104
Msa1036730 MtrunA17_Chr4g0058991 31.276 243 144 8 8 236 203 436 3.68e-25 103
Msa1036730 MtrunA17_Chr5g0429661 43.443 122 57 3 12 132 120 230 3.80e-25 102
Msa1036730 MtrunA17_Chr3g0117511 37.241 145 85 3 8 152 177 315 4.55e-25 103
Msa1036730 MtrunA17_Chr6g0480581 46.535 101 53 1 14 114 4 103 1.32e-24 99.0
Msa1036730 MtrunA17_Chr7g0228531 44.538 119 63 3 10 128 216 331 2.05e-24 101
Msa1036730 MtrunA17_Chr5g0425591 48.780 82 41 1 13 93 10 91 2.08e-24 94.0
Msa1036730 MtrunA17_Chr5g0417621 41.176 119 63 3 14 131 134 246 1.22e-22 96.7
Msa1036730 MtrunA17_Chr6g0453751 47.826 92 39 2 11 93 19 110 1.22e-22 90.5
Msa1036730 MtrunA17_Chr3g0093811 54.667 75 34 0 44 118 14 88 1.10e-21 91.7
Msa1036730 MtrunA17_Chr4g0042501 43.689 103 55 2 14 115 105 205 1.93e-21 93.2
Msa1036730 MtrunA17_Chr6g0460671 38.931 131 72 3 14 144 99 221 1.97e-21 92.4
Msa1036730 MtrunA17_Chr6g0460661 36.601 153 89 3 14 166 16 160 2.86e-21 87.8
Msa1036730 MtrunA17_Chr7g0254261 28.696 230 144 8 14 235 89 306 4.17e-21 91.3
Msa1036730 MtrunA17_Chr5g0397841 47.423 97 50 1 12 108 108 203 4.53e-21 92.4
Msa1036730 MtrunA17_Chr5g0437321 44.444 99 54 1 14 112 19 116 5.69e-21 90.1
Msa1036730 MtrunA17_Chr7g0228481 41.176 119 67 3 10 128 216 331 1.04e-20 90.9
Msa1036730 MtrunA17_Chr3g0125801 43.137 102 57 1 14 115 16 116 9.95e-20 86.7
Msa1036730 MtrunA17_Chr7g0228401 44.186 86 47 1 25 110 290 374 3.53e-19 87.0
Msa1036730 MtrunA17_Chr7g0238651 33.728 169 87 5 17 176 10 162 3.08e-18 83.6
Msa1036730 MtrunA17_Chr5g0416341 36.029 136 85 2 17 151 29 163 3.54e-18 84.0
Msa1036730 MtrunA17_Chr1g0177901 42.529 87 49 1 24 110 4 89 5.83e-18 80.1
Msa1036730 MtrunA17_Chr7g0233061 37.209 129 62 5 14 136 180 295 3.00e-17 80.5
Msa1036730 MtrunA17_Chr7g0247141 62.500 48 17 1 1 47 1 48 1.04e-16 72.8
Msa1036730 MtrunA17_Chr5g0434871 67.442 43 14 0 74 116 2 44 4.80e-16 71.2
Msa1036730 MtrunA17_Chr8g0362231 38.384 99 60 1 17 115 25 122 2.78e-15 75.5
Msa1036730 MtrunA17_Chr1g0193901 48.276 58 29 1 12 68 11 68 5.83e-13 63.9
Msa1036730 MtrunA17_Chr1g0193891 48.276 58 29 1 12 68 11 68 5.83e-13 63.9
Msa1036730 MtrunA17_Chr1g0193871 48.276 58 29 1 12 68 11 68 5.83e-13 63.9
Msa1036730 MtrunA17_Chr1g0193881 48.276 58 29 1 12 68 11 68 5.83e-13 63.9
Msa1036730 MtrunA17_Chr2g0322831 58.974 39 16 0 70 108 34 72 1.16e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036730 AT3G23250.1 50.847 295 111 9 1 274 1 282 2.18e-86 259
Msa1036730 AT2G31180.1 48.780 287 98 7 1 276 1 249 1.17e-82 249
Msa1036730 AT1G06180.1 51.711 263 91 8 1 262 1 228 1.82e-78 238
Msa1036730 AT3G02940.2 74.576 118 30 0 1 118 1 118 2.74e-64 204
Msa1036730 AT1G16490.1 45.815 227 93 4 2 217 4 211 3.64e-64 202
Msa1036730 AT3G02940.1 74.576 118 30 0 1 118 1 118 5.73e-64 203
Msa1036730 AT3G02940.3 74.576 118 30 0 1 118 1 118 5.73e-64 203
Msa1036730 AT5G16770.4 74.576 118 30 0 1 118 1 118 1.81e-63 202
Msa1036730 AT5G16770.3 74.576 118 30 0 1 118 1 118 1.81e-63 202
Msa1036730 AT3G61250.1 73.276 116 31 0 1 116 1 116 2.45e-63 201
Msa1036730 AT5G16770.1 74.576 118 30 0 1 118 1 118 3.26e-63 202
Msa1036730 AT5G16770.2 74.576 118 30 0 1 118 1 118 3.26e-63 202
Msa1036730 AT1G79180.1 72.034 118 33 0 2 119 4 121 1.36e-62 199
Msa1036730 AT4G05100.1 72.650 117 31 1 1 116 1 117 4.79e-61 196
Msa1036730 AT4G21440.1 70.690 116 34 0 1 116 1 116 6.62e-61 196
Msa1036730 AT1G56160.1 73.043 115 31 0 2 116 4 118 1.84e-60 194
Msa1036730 AT4G28110.1 70.690 116 34 0 1 116 1 116 4.95e-60 192
Msa1036730 AT3G01140.2 65.152 132 41 1 1 127 1 132 9.47e-59 191
Msa1036730 AT5G15310.1 69.828 116 35 0 1 116 1 116 2.00e-58 189
Msa1036730 AT5G16600.1 51.337 187 72 3 1 175 1 180 2.63e-58 189
Msa1036730 AT5G15310.2 69.828 116 35 0 1 116 1 116 2.76e-58 189
Msa1036730 AT5G15310.4 69.828 116 35 0 1 116 1 116 3.06e-58 186
Msa1036730 AT5G10280.1 68.644 118 37 0 1 118 1 118 4.89e-58 189
Msa1036730 AT3G13540.1 40.769 260 122 6 4 256 15 249 1.20e-57 185
Msa1036730 AT5G65230.1 69.492 118 36 0 1 118 1 118 2.68e-57 186
Msa1036730 AT4G12350.1 70.690 116 34 0 1 116 1 116 3.98e-57 185
Msa1036730 AT2G16720.1 52.410 166 67 2 1 154 1 166 7.50e-57 184
Msa1036730 AT4G22680.1 69.828 116 35 0 1 116 1 116 9.50e-57 183
Msa1036730 AT1G34670.1 68.644 118 37 0 1 118 1 118 1.06e-56 186
Msa1036730 AT4G09460.1 57.432 148 56 2 1 142 1 147 2.57e-56 181
Msa1036730 AT5G49330.1 67.241 116 38 0 1 116 1 116 2.83e-56 184
Msa1036730 AT1G22640.1 65.517 116 40 0 1 116 1 116 3.57e-56 181
Msa1036730 AT1G66230.1 69.828 116 35 0 1 116 1 116 5.43e-56 182
Msa1036730 AT1G79180.2 56.291 151 33 1 2 119 4 154 9.84e-56 182
Msa1036730 AT3G62610.1 68.966 116 36 0 1 116 1 116 1.15e-55 183
Msa1036730 AT3G01140.1 63.636 132 43 1 1 127 44 175 1.26e-55 184
Msa1036730 AT4G38620.1 66.379 116 39 0 1 116 1 116 1.78e-55 180
Msa1036730 AT3G12820.1 70.175 114 34 0 3 116 5 118 4.01e-55 178
Msa1036730 AT1G35515.1 64.655 116 41 0 1 116 1 116 6.17e-55 177
Msa1036730 AT1G08810.1 64.655 116 41 0 1 116 1 116 1.48e-54 178
Msa1036730 AT5G62470.2 64.655 116 41 0 1 116 1 116 1.95e-54 180
Msa1036730 AT5G60890.1 55.333 150 62 1 1 145 1 150 2.89e-54 177
Msa1036730 AT1G74650.1 65.517 116 40 0 1 116 1 116 3.07e-54 179
Msa1036730 AT2G47460.1 66.379 116 39 0 1 116 1 116 5.65e-54 179
Msa1036730 AT4G34990.1 67.241 116 38 0 1 116 1 116 7.73e-54 176
Msa1036730 AT3G47600.1 63.793 116 42 0 1 116 1 116 2.10e-53 177
Msa1036730 AT5G62470.1 64.655 116 40 1 1 116 1 115 4.68e-53 176
Msa1036730 AT3G28910.1 62.903 124 45 1 1 123 1 124 8.16e-53 175
Msa1036730 AT1G18570.1 65.812 117 39 1 1 116 1 117 1.05e-52 175
Msa1036730 AT5G61420.2 66.379 116 39 0 1 116 1 116 2.13e-52 175
Msa1036730 AT5G07690.1 66.379 116 39 0 1 116 1 116 5.28e-52 173
Msa1036730 AT4G17785.2 63.866 119 42 1 1 118 1 119 6.51e-52 173
Msa1036730 AT4G01680.3 64.655 116 41 0 1 116 1 116 7.65e-52 170
Msa1036730 AT4G17785.1 63.866 119 42 1 1 118 1 119 9.71e-52 173
Msa1036730 AT1G74080.1 64.655 116 41 0 1 116 1 116 2.24e-51 171
Msa1036730 AT5G14340.1 46.597 191 79 3 1 180 13 191 2.32e-51 169
Msa1036730 AT4G01680.1 64.655 116 41 0 1 116 1 116 2.90e-51 171
Msa1036730 AT1G09540.1 62.712 118 44 0 1 118 1 118 3.63e-51 172
Msa1036730 AT5G07700.1 53.503 157 66 2 1 151 1 156 1.90e-50 169
Msa1036730 AT5G07700.2 53.503 157 66 2 1 151 1 156 1.90e-50 169
Msa1036730 AT5G54230.1 63.793 116 42 0 1 116 1 116 2.32e-50 168
Msa1036730 AT1G57560.2 50.299 167 66 4 1 150 1 167 4.75e-50 166
Msa1036730 AT1G57560.1 62.069 116 44 0 1 116 1 116 4.75e-50 167
Msa1036730 AT5G26660.1 63.793 116 42 0 1 116 1 116 6.77e-50 168
Msa1036730 AT5G62320.1 53.061 147 57 2 2 136 3 149 1.01e-49 164
Msa1036730 AT3G13890.2 60.345 116 46 0 1 116 1 116 5.11e-49 166
Msa1036730 AT4G37780.1 58.678 121 49 1 1 120 1 121 8.96e-49 164
Msa1036730 AT5G56110.1 62.069 116 44 0 1 116 1 116 1.10e-48 164
Msa1036730 AT5G57620.1 59.200 125 50 1 1 124 1 125 1.44e-48 164
Msa1036730 AT4G01680.2 58.594 128 41 1 1 116 1 128 9.32e-48 162
Msa1036730 AT3G49690.1 59.350 123 49 1 1 122 1 123 1.54e-47 160
Msa1036730 AT5G65790.1 59.350 123 49 1 1 122 1 123 2.42e-47 162
Msa1036730 AT5G14750.1 62.500 104 39 0 13 116 17 120 6.12e-47 156
Msa1036730 AT5G40330.1 60.550 109 43 0 13 121 13 121 9.67e-47 156
Msa1036730 AT5G35550.1 60.684 117 46 0 12 128 14 130 9.92e-47 157
Msa1036730 AT5G23000.1 58.974 117 47 1 1 116 1 117 2.88e-46 158
Msa1036730 AT3G13890.1 56.000 125 46 1 1 116 1 125 6.63e-46 158
Msa1036730 AT1G63910.1 54.472 123 56 0 1 123 1 123 8.30e-46 158
Msa1036730 AT3G12720.1 57.658 111 47 0 6 116 16 126 1.11e-45 156
Msa1036730 AT1G74430.1 55.303 132 54 1 1 127 1 132 2.34e-45 154
Msa1036730 AT2G32460.1 58.824 119 45 1 8 122 14 132 9.52e-45 158
Msa1036730 AT2G36890.1 59.829 117 46 1 1 116 1 117 1.59e-44 152
Msa1036730 AT2G32460.2 59.483 116 43 1 11 122 5 120 1.82e-44 157
Msa1036730 AT2G36890.2 59.829 117 46 1 1 116 42 158 2.83e-44 153
Msa1036730 AT5G40350.1 41.089 202 103 4 12 209 17 206 8.74e-44 148
Msa1036730 AT1G18710.1 58.475 118 49 0 1 118 1 118 1.12e-43 149
Msa1036730 AT3G27920.1 59.615 104 42 0 13 116 15 118 1.37e-43 148
Msa1036730 AT3G28470.1 56.364 110 48 0 1 110 1 110 1.99e-43 150
Msa1036730 AT3G23250.2 43.038 237 101 9 59 274 2 225 5.90e-43 146
Msa1036730 AT3G27810.1 60.185 108 43 0 12 119 20 127 1.74e-42 145
Msa1036730 AT3G08500.1 62.037 108 41 0 9 116 27 134 1.76e-42 149
Msa1036730 AT5G06100.1 59.048 105 43 0 11 115 31 135 2.28e-42 150
Msa1036730 AT3G48920.1 58.182 110 46 0 13 122 19 128 7.33e-42 145
Msa1036730 AT3G24310.1 58.772 114 45 1 11 122 17 130 7.85e-42 145
Msa1036730 AT5G06100.5 59.048 105 43 0 11 115 31 135 8.91e-42 150
Msa1036730 AT5G06100.2 59.048 105 43 0 11 115 31 135 8.91e-42 150
Msa1036730 AT5G06100.3 59.048 105 43 0 11 115 31 135 8.91e-42 150
Msa1036730 AT5G06100.4 59.048 105 43 0 11 115 31 135 8.91e-42 150
Msa1036730 AT3G30210.1 46.575 146 72 1 11 156 26 165 1.25e-41 144
Msa1036730 AT4G13480.1 62.136 103 39 0 13 115 7 109 1.39e-41 144
Msa1036730 AT3G01530.1 57.798 109 46 0 8 116 21 129 1.94e-41 142
Msa1036730 AT1G66370.1 36.905 252 128 7 1 237 1 236 2.16e-41 143
Msa1036730 AT5G52600.1 57.692 104 44 0 12 115 12 115 6.57e-41 140
Msa1036730 AT4G26930.1 59.223 103 42 0 12 114 19 121 1.40e-40 144
Msa1036730 AT5G55020.1 60.748 107 42 0 12 118 26 132 1.42e-40 147
Msa1036730 AT3G11440.2 56.731 104 45 0 12 115 41 144 3.78e-40 145
Msa1036730 AT2G47190.1 56.731 104 45 0 12 115 20 123 1.08e-39 139
Msa1036730 AT3G11440.3 56.731 104 45 0 12 115 41 144 1.50e-39 145
Msa1036730 AT3G11440.4 56.731 104 45 0 12 115 41 144 1.50e-39 145
Msa1036730 AT3G11440.1 56.731 104 45 0 12 115 41 144 1.50e-39 145
Msa1036730 AT4G25560.1 57.407 108 46 0 13 120 11 118 7.22e-39 137
Msa1036730 AT1G25340.1 58.491 106 44 0 13 118 19 124 1.47e-38 137
Msa1036730 AT2G26960.1 55.660 106 47 0 9 114 17 122 1.48e-38 140
Msa1036730 AT1G68320.1 57.018 114 49 0 12 125 19 132 1.83e-38 136
Msa1036730 AT3G46130.1 55.238 105 47 0 11 115 8 112 4.59e-38 135
Msa1036730 AT5G59780.3 55.340 103 46 0 13 115 9 111 7.37e-38 134
Msa1036730 AT1G56650.1 38.914 221 112 4 11 221 7 214 2.90e-37 132
Msa1036730 AT5G52260.1 58.333 108 45 0 13 120 13 120 3.22e-37 133
Msa1036730 AT1G66380.1 60.000 105 42 0 11 115 7 111 5.07e-37 128
Msa1036730 AT1G48000.1 55.340 103 46 0 12 114 32 134 6.11e-37 131
Msa1036730 AT3G06490.1 58.559 111 46 0 8 118 15 125 1.57e-36 132
Msa1036730 AT3G53200.1 55.769 104 46 0 12 115 9 112 2.19e-36 130
Msa1036730 AT5G12870.1 37.657 239 113 5 12 244 18 226 1.81e-35 129
Msa1036730 AT5G49620.1 56.757 111 48 0 8 118 22 132 2.22e-35 129
Msa1036730 AT3G12820.2 78.571 70 15 0 47 116 1 70 2.50e-35 125
Msa1036730 AT5G14750.3 69.231 78 21 1 39 116 12 86 3.14e-35 125
Msa1036730 AT1G66390.1 59.048 105 43 0 11 115 7 111 3.26e-35 127
Msa1036730 AT1G25340.2 55.660 106 42 1 13 118 19 119 2.77e-34 125
Msa1036730 AT1G25340.3 55.660 106 42 1 13 118 19 119 5.59e-34 125
Msa1036730 AT5G35550.2 65.476 84 29 0 45 128 50 133 7.70e-34 124
Msa1036730 AT5G26660.2 71.622 74 21 0 43 116 12 85 1.44e-32 122
Msa1036730 AT3G60460.1 47.414 116 59 2 7 121 6 120 3.79e-32 120
Msa1036730 AT5G49620.2 50.400 125 48 1 8 118 22 146 6.89e-32 120
Msa1036730 AT2G26950.1 41.401 157 86 3 9 161 13 167 5.08e-31 119
Msa1036730 AT3G47600.2 68.056 72 23 0 45 116 39 110 2.15e-29 114
Msa1036730 AT5G40350.2 38.462 169 88 4 45 209 5 161 2.26e-29 109
Msa1036730 AT3G27810.2 62.667 75 28 0 45 119 4 78 1.09e-28 108
Msa1036730 AT3G53200.2 63.014 73 27 0 43 115 7 79 1.63e-27 105
Msa1036730 AT5G02320.1 49.524 105 52 1 12 116 125 228 3.01e-27 110
Msa1036730 AT5G02320.1 35.577 104 65 2 10 112 71 173 7.39e-14 71.6
Msa1036730 AT5G02320.2 49.524 105 52 1 12 116 125 228 3.01e-27 110
Msa1036730 AT5G02320.2 35.577 104 65 2 10 112 71 173 7.39e-14 71.6
Msa1036730 AT5G02320.3 49.524 105 52 1 12 116 65 168 4.04e-27 110
Msa1036730 AT5G02320.3 35.577 104 65 2 10 112 11 113 1.11e-13 71.2
Msa1036730 AT3G46130.3 62.500 72 27 0 44 115 9 80 5.43e-27 105
Msa1036730 AT5G59780.2 61.644 73 28 0 43 115 18 90 8.47e-27 104
Msa1036730 AT3G46130.4 61.644 73 28 0 43 115 18 90 1.21e-26 104
Msa1036730 AT3G09370.2 40.476 168 86 3 12 166 133 299 2.93e-26 107
Msa1036730 AT3G09370.2 37.000 100 61 2 14 112 83 181 9.04e-14 71.2
Msa1036730 AT3G09370.3 40.476 168 86 3 12 166 141 307 2.93e-26 107
Msa1036730 AT3G09370.3 37.000 100 61 2 14 112 91 189 9.92e-14 71.2
Msa1036730 AT3G09370.1 40.476 168 86 3 12 166 128 294 3.27e-26 107
Msa1036730 AT3G09370.1 37.000 100 61 2 14 112 78 176 1.00e-13 71.2
Msa1036730 AT4G18770.1 44.954 109 59 1 8 116 211 318 3.90e-26 106
Msa1036730 AT3G09230.1 47.664 107 47 2 14 116 55 156 4.24e-26 106
Msa1036730 AT5G11510.3 47.706 109 48 2 12 116 79 182 4.96e-26 107
Msa1036730 AT5G11510.3 37.000 100 61 2 14 112 29 127 4.64e-15 75.5
Msa1036730 AT5G11510.1 47.706 109 48 2 12 116 79 182 4.96e-26 107
Msa1036730 AT5G11510.1 37.000 100 61 2 14 112 29 127 4.64e-15 75.5
Msa1036730 AT5G11510.4 47.706 109 48 2 12 116 79 182 4.96e-26 107
Msa1036730 AT5G11510.4 37.000 100 61 2 14 112 29 127 4.64e-15 75.5
Msa1036730 AT5G11510.5 47.706 109 48 2 12 116 79 182 6.52e-26 107
Msa1036730 AT5G11510.5 37.000 100 61 2 14 112 29 127 4.83e-15 75.5
Msa1036730 AT5G11510.2 47.706 109 48 2 12 116 79 182 6.54e-26 107
Msa1036730 AT5G11510.2 37.000 100 61 2 14 112 29 127 4.53e-15 75.5
Msa1036730 AT3G55730.1 38.889 162 85 4 14 166 56 212 7.65e-26 105
Msa1036730 AT2G23290.1 49.020 102 51 1 14 115 13 113 2.31e-25 102
Msa1036730 AT1G71030.1 42.742 124 54 4 35 150 4 118 4.95e-25 99.0
Msa1036730 AT2G39880.1 47.170 106 47 2 14 115 50 150 6.01e-25 102
Msa1036730 AT1G22640.3 70.690 58 17 0 59 116 2 59 7.25e-25 99.0
Msa1036730 AT3G50060.1 46.078 102 54 1 14 115 6 106 9.15e-25 100
Msa1036730 AT1G66380.3 65.278 72 25 0 44 115 7 78 9.46e-25 95.9
Msa1036730 AT5G14750.4 67.797 59 19 0 58 116 1 59 1.08e-24 96.7
Msa1036730 AT5G14750.2 67.797 59 19 0 58 116 1 59 1.08e-24 96.7
Msa1036730 AT1G71030.2 45.370 108 43 3 51 150 5 104 1.30e-24 97.8
Msa1036730 AT1G69560.1 40.310 129 70 3 9 136 102 224 1.60e-24 100
Msa1036730 AT1G69560.2 40.310 129 70 3 9 136 118 240 1.70e-24 100
Msa1036730 AT1G26780.2 29.771 262 147 9 12 249 96 344 2.12e-24 100
Msa1036730 AT4G37260.1 44.144 111 61 1 5 115 4 113 2.87e-24 100
Msa1036730 AT3G27785.1 30.736 231 123 9 8 238 183 376 3.04e-24 101
Msa1036730 AT1G17950.1 45.283 106 57 1 10 115 1 105 4.44e-24 97.8
Msa1036730 AT4G32730.1 44.762 105 57 1 12 116 85 188 7.16e-24 101
Msa1036730 AT4G32730.1 36.000 100 62 2 14 112 35 133 9.46e-15 74.7
Msa1036730 AT4G32730.5 44.762 105 57 1 12 116 85 188 7.93e-24 101
Msa1036730 AT4G32730.5 36.000 100 62 2 14 112 35 133 1.12e-14 74.3
Msa1036730 AT4G32730.4 44.762 105 57 1 12 116 85 188 7.93e-24 101
Msa1036730 AT4G32730.4 36.000 100 62 2 14 112 35 133 1.12e-14 74.3
Msa1036730 AT4G32730.3 44.762 105 57 1 12 116 85 188 7.93e-24 101
Msa1036730 AT4G32730.3 36.000 100 62 2 14 112 35 133 1.12e-14 74.3
Msa1036730 AT4G32730.2 44.762 105 57 1 12 116 85 188 7.93e-24 101
Msa1036730 AT4G32730.2 36.000 100 62 2 14 112 35 133 1.12e-14 74.3
Msa1036730 AT5G40360.1 40.678 118 62 3 12 129 156 265 1.01e-23 99.0
Msa1036730 AT1G26780.1 42.149 121 63 3 12 131 96 210 1.11e-23 97.4
Msa1036730 AT5G67300.1 46.078 102 54 1 14 115 6 106 1.80e-23 97.4
Msa1036730 AT5G58850.1 41.441 111 64 1 12 122 103 212 3.88e-23 98.2
Msa1036730 AT1G66380.2 54.878 82 37 0 11 92 7 88 5.97e-23 91.3
Msa1036730 AT4G33450.1 41.026 117 63 2 3 119 13 123 1.21e-22 94.4
Msa1036730 AT1G18960.1 43.636 110 59 2 14 123 10 116 1.59e-22 95.1
Msa1036730 AT1G73410.1 48.113 106 52 2 14 118 6 109 5.10e-22 92.4
Msa1036730 AT5G11050.1 32.338 201 119 5 14 213 105 289 8.42e-22 94.4
Msa1036730 AT1G73410.2 48.113 106 52 2 14 118 6 109 1.56e-21 90.1
Msa1036730 AT3G29020.1 40.000 105 62 1 14 118 65 168 1.83e-21 90.5
Msa1036730 AT3G29020.2 40.000 105 62 1 14 118 67 170 4.13e-21 90.9
Msa1036730 AT5G17800.1 40.367 109 64 1 14 122 93 200 6.11e-21 90.9
Msa1036730 AT4G00540.2 41.818 110 60 2 12 118 101 209 1.15e-18 85.5
Msa1036730 AT4G00540.2 36.449 107 60 3 14 112 46 152 1.24e-12 67.8
Msa1036730 AT4G00540.1 41.818 110 60 2 12 118 99 207 2.17e-18 84.7
Msa1036730 AT4G00540.1 36.449 107 60 3 14 112 44 150 1.97e-12 67.4
Msa1036730 AT2G37630.1 30.526 190 116 5 17 195 7 191 2.18e-18 84.3
Msa1036730 AT2G25230.1 40.517 116 64 4 7 121 19 130 2.88e-17 79.3
Msa1036730 AT5G39700.1 40.625 96 56 1 15 110 57 151 3.23e-17 78.2
Msa1036730 AT1G14350.2 34.559 136 83 2 17 152 28 157 5.62e-17 80.5
Msa1036730 AT1G14350.1 34.559 136 83 2 17 152 28 157 5.62e-17 80.5
Msa1036730 AT2G02820.3 39.394 99 59 1 17 115 33 130 9.34e-17 79.3
Msa1036730 AT2G02820.1 39.394 99 59 1 17 115 33 130 1.60e-16 79.3
Msa1036730 AT2G02820.2 39.394 99 59 1 17 115 33 130 1.91e-16 79.3
Msa1036730 AT4G25560.2 60.000 50 20 0 71 120 3 52 1.89e-14 71.2
Msa1036730 AT1G16490.2 32.895 152 70 5 77 217 12 142 1.65e-13 68.2
Msa1036730 AT5G40430.1 33.333 114 72 3 7 120 47 156 2.84e-13 68.6
Msa1036730 AT5G59780.1 58.696 46 19 0 70 115 1 46 6.89e-13 65.9
Msa1036730 AT3G46130.2 58.696 46 19 0 70 115 1 46 1.10e-12 65.9
Msa1036730 AT3G18100.1 31.783 129 82 2 13 141 545 667 2.51e-11 64.3
Msa1036730 AT3G18100.3 31.783 129 82 2 13 141 497 619 3.47e-11 63.9
Msa1036730 AT3G18100.4 31.783 129 82 2 13 141 384 506 3.84e-11 63.5
Msa1036730 AT3G18100.2 31.783 129 82 2 13 141 332 454 4.28e-11 63.5
Msa1036730 AT1G74650.3 66.667 39 13 0 78 116 2 40 5.32e-11 62.0
Msa1036730 AT3G28910.2 59.574 47 18 1 78 123 2 48 6.43e-11 61.6
Msa1036730 AT1G14350.3 35.052 97 58 1 56 152 23 114 8.33e-11 62.4
Msa1036730 AT1G14350.4 35.052 97 58 1 56 152 23 114 8.33e-11 62.4

Find 63 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCAAAACAACACGTAATT+TGG 0.107346 7_1:+73180726 Msa1036730:five_prime_UTR
TATTGCATCCTCTTCTTCTT+TGG 0.213171 7_1:-73181115 None:intergenic
ATTTATTAGTTACTACAAAA+TGG 0.214423 7_1:+73180749 Msa1036730:exon
TATGCCAAGATATGGATTTC+TGG 0.230203 7_1:+73182598 Msa1036730:CDS
AGCTCCATGTTGTGAGAAAA+TGG 0.236079 7_1:+73180776 Msa1036730:CDS
ATCCAAATTACGTGTTGTTT+TGG 0.237055 7_1:-73180728 None:intergenic
TTTGTTCCTGTTTGGTGTCT+TGG 0.278621 7_1:-73182278 None:intergenic
TTTGGTGTCTTGGTCTGAAT+TGG 0.308015 7_1:-73182268 None:intergenic
TGCATCAAATGTTGGGAAAC+AGG 0.310941 7_1:+73181145 Msa1036730:CDS
CTTGTTATTCCTAGATTGTA+TGG 0.311820 7_1:+73182705 Msa1036730:three_prime_UTR
ACTCCTTCTTCAGTTGCTAA+TGG 0.331374 7_1:-73182552 None:intergenic
ATCGAGTTTATGCCAAGATA+TGG 0.352436 7_1:+73182590 Msa1036730:CDS
ATCAATTTGCATCAAATGTT+GGG 0.356250 7_1:+73181138 Msa1036730:CDS
ATCAATCACATAAACACTTA+TGG 0.369204 7_1:+73180843 Msa1036730:CDS
CATTGAGACAAGTGGTGTTA+TGG 0.378117 7_1:+73182497 Msa1036730:CDS
TAATAATGATGTTGTTGATT+CGG 0.397602 7_1:+73182410 Msa1036730:CDS
AATCAATTTGCATCAAATGT+TGG 0.410701 7_1:+73181137 Msa1036730:CDS
AAGTTACCCCGCTTGATATC+CGG 0.423140 7_1:-73181090 None:intergenic
AAAATGGTACCGGCTTGTTT+GGG 0.424185 7_1:-73180888 None:intergenic
AACAAAATCATGAAGATGAT+AGG 0.428670 7_1:+73182295 Msa1036730:CDS
AATATGCCAACTTGATCAAA+AGG 0.440628 7_1:-73180654 None:intergenic
ACACTTATGGTCATTCCAAT+TGG 0.447001 7_1:+73180856 Msa1036730:CDS
TTTATTAGTTACTACAAAAT+GGG 0.447659 7_1:+73180750 Msa1036730:exon
GGCACACCCATTTGAAGAAA+AGG 0.451156 7_1:+73182163 Msa1036730:CDS
TTTGGGAAGAGCACGCCAAT+TGG 0.452512 7_1:-73180871 None:intergenic
GCTCCATGTTGTGAGAAAAT+GGG 0.457374 7_1:+73180777 Msa1036730:CDS
ATACAAGTTCCATACAATCT+AGG 0.460971 7_1:-73182714 None:intergenic
GAGAAAATGGGGTTGAAGAA+AGG 0.466929 7_1:+73180789 Msa1036730:CDS
CGTGCCAGAAATCCATATCT+TGG 0.469560 7_1:-73182602 None:intergenic
ACTATTGCAGCAAGGTTACC+TGG 0.477392 7_1:+73182111 Msa1036730:CDS
GGTGTCTTGGTCTGAATTGG+AGG 0.483617 7_1:-73182265 None:intergenic
ATCTCGTTATCTGTTCGTCC+AGG 0.483748 7_1:-73182129 None:intergenic
GAACTTGTATGCTCATTCAA+TGG 0.487379 7_1:+73182727 Msa1036730:three_prime_UTR
TACTGTTGTTGTGTTCATGT+TGG 0.490636 7_1:-73182197 None:intergenic
CGATCTTCTTCTGTAGTCCA+TGG 0.493447 7_1:-73180813 None:intergenic
AGAAAATGGGGTTGAAGAAA+GGG 0.495895 7_1:+73180790 Msa1036730:CDS
GCTCCATTAGCAACTGAAGA+AGG 0.498064 7_1:+73182549 Msa1036730:CDS
TTCAGACCAAGACACCAAAC+AGG 0.504694 7_1:+73182272 Msa1036730:CDS
AAAGGTGACACTAAAGTTGA+GGG 0.532976 7_1:-73180636 None:intergenic
GCAGAAAATGTAGGCAAGTG+TGG 0.547305 7_1:-73182803 None:intergenic
TCAACAGGATTGCTAAGGTG+TGG 0.554823 7_1:+73181030 Msa1036730:intron
AAAAGGTGACACTAAAGTTG+AGG 0.557389 7_1:-73180637 None:intergenic
ATGGGCAAATTATCTGAAGC+CGG 0.572774 7_1:+73181071 Msa1036730:CDS
TCTGAAGCCGGATATCAAGC+GGG 0.573369 7_1:+73181083 Msa1036730:CDS
CGTGCTCTTCCCAAACAAGC+CGG 0.577893 7_1:+73180879 Msa1036730:CDS
ATTTGAAAACAAGGATTGCA+CGG 0.579762 7_1:-73180703 None:intergenic
TGCCTAGATGCAGAAAATGT+AGG 0.580146 7_1:-73182812 None:intergenic
ATTTATCAACAGGATTGCTA+AGG 0.580702 7_1:+73181025 Msa1036730:intron
AAAGAGTTGCAGATTGCGAT+GGG 0.587500 7_1:+73181053 Msa1036730:CDS
TGGGGTTGAAGAAAGGGCCA+TGG 0.599615 7_1:+73180796 Msa1036730:CDS
TAACTTCACCAAAGAAGAAG+AGG 0.601393 7_1:+73181107 Msa1036730:CDS
ATCTGAAGCCGGATATCAAG+CGG 0.604099 7_1:+73181082 Msa1036730:CDS
GTCGACATGAAAGTCCAACT+TGG 0.605781 7_1:-73182241 None:intergenic
GAAAGAGTTGCAGATTGCGA+TGG 0.612569 7_1:+73181052 Msa1036730:CDS
AATTCTAGCATTGAGACAAG+TGG 0.616379 7_1:+73182489 Msa1036730:CDS
ACAAGTGGTGTTATGGACAT+TGG 0.654601 7_1:+73182504 Msa1036730:CDS
CTCCATGTTGTGAGAAAATG+GGG 0.664661 7_1:+73180778 Msa1036730:CDS
CGATGTTTATGCGAGAGCTG+AGG 0.668356 7_1:+73182623 Msa1036730:CDS
AAGTGTTTATGTGATTGATG+AGG 0.675801 7_1:-73180839 None:intergenic
GAAAATGTAGGCAAGTGTGG+AGG 0.676077 7_1:-73182800 None:intergenic
CTGAAGCCGGATATCAAGCG+GGG 0.683628 7_1:+73181084 Msa1036730:CDS
GATGGTCAACTATTGCAGCA+AGG 0.684333 7_1:+73182103 Msa1036730:intron
GACACGTCACTAGAACACTG+TGG 0.800880 7_1:-73182318 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATTAGTAAAACTT+TGG - chr7_1:73181001-73181020 None:intergenic 10.0%
!!! TTTTTTTTTAAGGAAATTAA+AGG - chr7_1:73181540-73181559 None:intergenic 10.0%
!! TTTCCTTAAAAAAAAAAAAA+AGG + chr7_1:73181544-73181563 Msa1036730:intron 10.0%
!!! TTTAACTTAAAAAAAAAAGT+GGG - chr7_1:73181775-73181794 None:intergenic 10.0%
!!! ATTTAACTTAAAAAAAAAAG+TGG - chr7_1:73181776-73181795 None:intergenic 10.0%
!! TATTATTAAAAATTGTGATA+TGG + chr7_1:73181836-73181855 Msa1036730:intron 10.0%
!!! AAAACATTTTTATTTTACAT+AGG - chr7_1:73181988-73182007 None:intergenic 10.0%
!! AAAAAAAATTAGTAAAACTT+TGG - chr7_1:73181001-73181020 None:intergenic 10.0%
!!! TTTTTTTTTAAGGAAATTAA+AGG - chr7_1:73181540-73181559 None:intergenic 10.0%
!! TTTCCTTAAAAAAAAAAAAA+AGG + chr7_1:73181544-73181563 Msa1036730:intron 10.0%
!!! TTTAACTTAAAAAAAAAAGT+GGG - chr7_1:73181775-73181794 None:intergenic 10.0%
!!! ATTTAACTTAAAAAAAAAAG+TGG - chr7_1:73181776-73181795 None:intergenic 10.0%
!! TATTATTAAAAATTGTGATA+TGG + chr7_1:73181836-73181855 Msa1036730:intron 10.0%
!!! AAAACATTTTTATTTTACAT+AGG - chr7_1:73181988-73182007 None:intergenic 10.0%
!! ATTTATTAGTTACTACAAAA+TGG + chr7_1:73180749-73180768 Msa1036730:exon 15.0%
!! TTTATTAGTTACTACAAAAT+GGG + chr7_1:73180750-73180769 Msa1036730:exon 15.0%
!!! AATTTTCTTCAAATTAGTAA+AGG - chr7_1:73180930-73180949 None:intergenic 15.0%
!!! TTTTTTACAAATTTATCAAC+AGG + chr7_1:73181015-73181034 Msa1036730:intron 15.0%
!!! CTTCCTTTTTTTTTTTTTTA+AGG - chr7_1:73181550-73181569 None:intergenic 15.0%
!! CTTAAAAAAAAAAAAAAGGA+AGG + chr7_1:73181548-73181567 Msa1036730:intron 15.0%
!!! TTGATTTATCTTTAGTTTTA+AGG + chr7_1:73181605-73181624 Msa1036730:intron 15.0%
!!! TGATTTATCTTTAGTTTTAA+GGG + chr7_1:73181606-73181625 Msa1036730:intron 15.0%
!!! AATGTTTTTTTGTCTAATTT+TGG + chr7_1:73182000-73182019 Msa1036730:intron 15.0%
!! TTGTGCAAATATTTATTTAA+TGG + chr7_1:73182065-73182084 Msa1036730:intron 15.0%
!! ATTTATTAGTTACTACAAAA+TGG + chr7_1:73180749-73180768 Msa1036730:exon 15.0%
!! TTTATTAGTTACTACAAAAT+GGG + chr7_1:73180750-73180769 Msa1036730:exon 15.0%
!!! AATTTTCTTCAAATTAGTAA+AGG - chr7_1:73180930-73180949 None:intergenic 15.0%
!!! TTTTTTACAAATTTATCAAC+AGG + chr7_1:73181015-73181034 Msa1036730:intron 15.0%
!!! CTTCCTTTTTTTTTTTTTTA+AGG - chr7_1:73181550-73181569 None:intergenic 15.0%
!! CTTAAAAAAAAAAAAAAGGA+AGG + chr7_1:73181548-73181567 Msa1036730:intron 15.0%
!!! TTGATTTATCTTTAGTTTTA+AGG + chr7_1:73181605-73181624 Msa1036730:intron 15.0%
!!! TGATTTATCTTTAGTTTTAA+GGG + chr7_1:73181606-73181625 Msa1036730:intron 15.0%
!!! AATGTTTTTTTGTCTAATTT+TGG + chr7_1:73182000-73182019 Msa1036730:intron 15.0%
!! TTGTGCAAATATTTATTTAA+TGG + chr7_1:73182065-73182084 Msa1036730:intron 15.0%
!!! GATTTTACAAACTTAACTAA+TGG + chr7_1:73181263-73181282 Msa1036730:intron 20.0%
!! AGATAAATCAAAAGACATAT+GGG - chr7_1:73181596-73181615 None:intergenic 20.0%
!! AAGATAAATCAAAAGACATA+TGG - chr7_1:73181597-73181616 None:intergenic 20.0%
!! ATAACGAGATAAAAAATGTA+TGG + chr7_1:73182142-73182161 Msa1036730:CDS 20.0%
!!! TAATAATGATGTTGTTGATT+CGG + chr7_1:73182410-73182429 Msa1036730:CDS 20.0%
!! TTGTTTAGACAAAAATAATG+TGG + chr7_1:73182774-73182793 Msa1036730:three_prime_UTR 20.0%
!!! GATTTTACAAACTTAACTAA+TGG + chr7_1:73181263-73181282 Msa1036730:intron 20.0%
!! AGATAAATCAAAAGACATAT+GGG - chr7_1:73181596-73181615 None:intergenic 20.0%
!! AAGATAAATCAAAAGACATA+TGG - chr7_1:73181597-73181616 None:intergenic 20.0%
!! ATAACGAGATAAAAAATGTA+TGG + chr7_1:73182142-73182161 Msa1036730:CDS 20.0%
!!! TAATAATGATGTTGTTGATT+CGG + chr7_1:73182410-73182429 Msa1036730:CDS 20.0%
!! TTGTTTAGACAAAAATAATG+TGG + chr7_1:73182774-73182793 Msa1036730:three_prime_UTR 20.0%
!!! GTTTTGGATATTTGAAAACA+AGG - chr7_1:73180715-73180734 None:intergenic 25.0%
! ATCAATCACATAAACACTTA+TGG + chr7_1:73180843-73180862 Msa1036730:CDS 25.0%
! ATTAGTAAAGGCTTGAATTA+GGG - chr7_1:73180918-73180937 None:intergenic 25.0%
! AATTAGTAAAGGCTTGAATT+AGG - chr7_1:73180919-73180938 None:intergenic 25.0%
! AATCAATTTGCATCAAATGT+TGG + chr7_1:73181137-73181156 Msa1036730:CDS 25.0%
! ATCAATTTGCATCAAATGTT+GGG + chr7_1:73181138-73181157 Msa1036730:CDS 25.0%
!!! GCGTGAACATATATTTTTTT+AGG - chr7_1:73181499-73181518 None:intergenic 25.0%
! GATAAATCAAAAGACATATG+GGG - chr7_1:73181595-73181614 None:intergenic 25.0%
! AAGCAAAATCATAACAAGAT+TGG + chr7_1:73181629-73181648 Msa1036730:intron 25.0%
! GTAAACCAAATTTCAAAAGT+AGG + chr7_1:73181903-73181922 Msa1036730:intron 25.0%
! GTCTCGAATAATATTAACTT+CGG + chr7_1:73181953-73181972 Msa1036730:intron 25.0%
! AAACAAAAAACAAACCAAGT+TGG + chr7_1:73182227-73182246 Msa1036730:CDS 25.0%
! AACAAAATCATGAAGATGAT+AGG + chr7_1:73182295-73182314 Msa1036730:CDS 25.0%
!!! GTTTTGGATATTTGAAAACA+AGG - chr7_1:73180715-73180734 None:intergenic 25.0%
! ATCAATCACATAAACACTTA+TGG + chr7_1:73180843-73180862 Msa1036730:CDS 25.0%
! ATTAGTAAAGGCTTGAATTA+GGG - chr7_1:73180918-73180937 None:intergenic 25.0%
! AATTAGTAAAGGCTTGAATT+AGG - chr7_1:73180919-73180938 None:intergenic 25.0%
! AATCAATTTGCATCAAATGT+TGG + chr7_1:73181137-73181156 Msa1036730:CDS 25.0%
! ATCAATTTGCATCAAATGTT+GGG + chr7_1:73181138-73181157 Msa1036730:CDS 25.0%
!!! GCGTGAACATATATTTTTTT+AGG - chr7_1:73181499-73181518 None:intergenic 25.0%
! GATAAATCAAAAGACATATG+GGG - chr7_1:73181595-73181614 None:intergenic 25.0%
! AAGCAAAATCATAACAAGAT+TGG + chr7_1:73181629-73181648 Msa1036730:intron 25.0%
! GTAAACCAAATTTCAAAAGT+AGG + chr7_1:73181903-73181922 Msa1036730:intron 25.0%
! GTCTCGAATAATATTAACTT+CGG + chr7_1:73181953-73181972 Msa1036730:intron 25.0%
! AAACAAAAAACAAACCAAGT+TGG + chr7_1:73182227-73182246 Msa1036730:CDS 25.0%
! AACAAAATCATGAAGATGAT+AGG + chr7_1:73182295-73182314 Msa1036730:CDS 25.0%
AATATGCCAACTTGATCAAA+AGG - chr7_1:73180657-73180676 None:intergenic 30.0%
ATTTGAAAACAAGGATTGCA+CGG - chr7_1:73180706-73180725 None:intergenic 30.0%
ATCCAAAACAACACGTAATT+TGG + chr7_1:73180726-73180745 Msa1036730:five_prime_UTR 30.0%
!!! ATCCAAATTACGTGTTGTTT+TGG - chr7_1:73180731-73180750 None:intergenic 30.0%
AAGTGTTTATGTGATTGATG+AGG - chr7_1:73180842-73180861 None:intergenic 30.0%
TTAGTAAAGGCTTGAATTAG+GGG - chr7_1:73180917-73180936 None:intergenic 30.0%
ATTTATCAACAGGATTGCTA+AGG + chr7_1:73181025-73181044 Msa1036730:intron 30.0%
ATCACAATATCACATGAGTT+TGG - chr7_1:73181246-73181265 None:intergenic 30.0%
GACAAATCAGAACAATTGTT+AGG + chr7_1:73181302-73181321 Msa1036730:intron 30.0%
AGGAAGGAGAAAATGAATAA+TGG + chr7_1:73181564-73181583 Msa1036730:intron 30.0%
GGAGAAAATGAATAATGGTT+TGG + chr7_1:73181569-73181588 Msa1036730:intron 30.0%
!! AGAGAAAATCCTTTGCTTTT+TGG - chr7_1:73181734-73181753 None:intergenic 30.0%
CGAAAAATATCATACTTTCG+TGG + chr7_1:73181881-73181900 Msa1036730:intron 30.0%
! TTCATGATTTTGTTCCTGTT+TGG - chr7_1:73182289-73182308 None:intergenic 30.0%
! GGCAGAAAATAATTTTGCAT+TGG + chr7_1:73182431-73182450 Msa1036730:CDS 30.0%
! TTGCATTGGATGATGATTTT+TGG + chr7_1:73182445-73182464 Msa1036730:CDS 30.0%
!! CTTGTTATTCCTAGATTGTA+TGG + chr7_1:73182705-73182724 Msa1036730:three_prime_UTR 30.0%
ATACAAGTTCCATACAATCT+AGG - chr7_1:73182717-73182736 None:intergenic 30.0%
AATATGCCAACTTGATCAAA+AGG - chr7_1:73180657-73180676 None:intergenic 30.0%
ATTTGAAAACAAGGATTGCA+CGG - chr7_1:73180706-73180725 None:intergenic 30.0%
ATCCAAAACAACACGTAATT+TGG + chr7_1:73180726-73180745 Msa1036730:five_prime_UTR 30.0%
!!! ATCCAAATTACGTGTTGTTT+TGG - chr7_1:73180731-73180750 None:intergenic 30.0%
AAGTGTTTATGTGATTGATG+AGG - chr7_1:73180842-73180861 None:intergenic 30.0%
TTAGTAAAGGCTTGAATTAG+GGG - chr7_1:73180917-73180936 None:intergenic 30.0%
ATTTATCAACAGGATTGCTA+AGG + chr7_1:73181025-73181044 Msa1036730:intron 30.0%
ATCACAATATCACATGAGTT+TGG - chr7_1:73181246-73181265 None:intergenic 30.0%
GACAAATCAGAACAATTGTT+AGG + chr7_1:73181302-73181321 Msa1036730:intron 30.0%
AGGAAGGAGAAAATGAATAA+TGG + chr7_1:73181564-73181583 Msa1036730:intron 30.0%
GGAGAAAATGAATAATGGTT+TGG + chr7_1:73181569-73181588 Msa1036730:intron 30.0%
!! AGAGAAAATCCTTTGCTTTT+TGG - chr7_1:73181734-73181753 None:intergenic 30.0%
CGAAAAATATCATACTTTCG+TGG + chr7_1:73181881-73181900 Msa1036730:intron 30.0%
! TTCATGATTTTGTTCCTGTT+TGG - chr7_1:73182289-73182308 None:intergenic 30.0%
! GGCAGAAAATAATTTTGCAT+TGG + chr7_1:73182431-73182450 Msa1036730:CDS 30.0%
! TTGCATTGGATGATGATTTT+TGG + chr7_1:73182445-73182464 Msa1036730:CDS 30.0%
!! CTTGTTATTCCTAGATTGTA+TGG + chr7_1:73182705-73182724 Msa1036730:three_prime_UTR 30.0%
ATACAAGTTCCATACAATCT+AGG - chr7_1:73182717-73182736 None:intergenic 30.0%
AAAGGTGACACTAAAGTTGA+GGG - chr7_1:73180639-73180658 None:intergenic 35.0%
AAAAGGTGACACTAAAGTTG+AGG - chr7_1:73180640-73180659 None:intergenic 35.0%
AGAAAATGGGGTTGAAGAAA+GGG + chr7_1:73180790-73180809 Msa1036730:CDS 35.0%
ACACTTATGGTCATTCCAAT+TGG + chr7_1:73180856-73180875 Msa1036730:CDS 35.0%
CTTGAATTAGGGGGAAAAAA+TGG - chr7_1:73180907-73180926 None:intergenic 35.0%
TAGTAAAGGCTTGAATTAGG+GGG - chr7_1:73180916-73180935 None:intergenic 35.0%
TAACTTCACCAAAGAAGAAG+AGG + chr7_1:73181107-73181126 Msa1036730:CDS 35.0%
TATTGCATCCTCTTCTTCTT+TGG - chr7_1:73181118-73181137 None:intergenic 35.0%
CATAACAAGATTGGTACAGA+TGG + chr7_1:73181638-73181657 Msa1036730:intron 35.0%
AGTACTACTCCAAAAAGCAA+AGG + chr7_1:73181722-73181741 Msa1036730:intron 35.0%
!!! CTCAGCCTACTTTTGAAATT+TGG - chr7_1:73181911-73181930 None:intergenic 35.0%
! TGGTTTAATGATGATGCAGA+TGG + chr7_1:73182085-73182104 Msa1036730:intron 35.0%
!!! TTGTGTTCATGTTGGTTTTG+TGG - chr7_1:73182192-73182211 None:intergenic 35.0%
TACTGTTGTTGTGTTCATGT+TGG - chr7_1:73182200-73182219 None:intergenic 35.0%
! AATTCTAGCATTGAGACAAG+TGG + chr7_1:73182489-73182508 Msa1036730:CDS 35.0%
ATCGAGTTTATGCCAAGATA+TGG + chr7_1:73182590-73182609 Msa1036730:CDS 35.0%
TATGCCAAGATATGGATTTC+TGG + chr7_1:73182598-73182617 Msa1036730:CDS 35.0%
GAACTTGTATGCTCATTCAA+TGG + chr7_1:73182727-73182746 Msa1036730:three_prime_UTR 35.0%
AAAGGTGACACTAAAGTTGA+GGG - chr7_1:73180639-73180658 None:intergenic 35.0%
AAAAGGTGACACTAAAGTTG+AGG - chr7_1:73180640-73180659 None:intergenic 35.0%
AGAAAATGGGGTTGAAGAAA+GGG + chr7_1:73180790-73180809 Msa1036730:CDS 35.0%
ACACTTATGGTCATTCCAAT+TGG + chr7_1:73180856-73180875 Msa1036730:CDS 35.0%
CTTGAATTAGGGGGAAAAAA+TGG - chr7_1:73180907-73180926 None:intergenic 35.0%
TAGTAAAGGCTTGAATTAGG+GGG - chr7_1:73180916-73180935 None:intergenic 35.0%
TAACTTCACCAAAGAAGAAG+AGG + chr7_1:73181107-73181126 Msa1036730:CDS 35.0%
TATTGCATCCTCTTCTTCTT+TGG - chr7_1:73181118-73181137 None:intergenic 35.0%
CATAACAAGATTGGTACAGA+TGG + chr7_1:73181638-73181657 Msa1036730:intron 35.0%
AGTACTACTCCAAAAAGCAA+AGG + chr7_1:73181722-73181741 Msa1036730:intron 35.0%
!!! CTCAGCCTACTTTTGAAATT+TGG - chr7_1:73181911-73181930 None:intergenic 35.0%
! TGGTTTAATGATGATGCAGA+TGG + chr7_1:73182085-73182104 Msa1036730:intron 35.0%
!!! TTGTGTTCATGTTGGTTTTG+TGG - chr7_1:73182192-73182211 None:intergenic 35.0%
TACTGTTGTTGTGTTCATGT+TGG - chr7_1:73182200-73182219 None:intergenic 35.0%
! AATTCTAGCATTGAGACAAG+TGG + chr7_1:73182489-73182508 Msa1036730:CDS 35.0%
ATCGAGTTTATGCCAAGATA+TGG + chr7_1:73182590-73182609 Msa1036730:CDS 35.0%
TATGCCAAGATATGGATTTC+TGG + chr7_1:73182598-73182617 Msa1036730:CDS 35.0%
GAACTTGTATGCTCATTCAA+TGG + chr7_1:73182727-73182746 Msa1036730:three_prime_UTR 35.0%
! GTGTCACCTTTTGATCAAGT+TGG + chr7_1:73180648-73180667 Msa1036730:five_prime_UTR 40.0%
AGCTCCATGTTGTGAGAAAA+TGG + chr7_1:73180776-73180795 Msa1036730:CDS 40.0%
GCTCCATGTTGTGAGAAAAT+GGG + chr7_1:73180777-73180796 Msa1036730:CDS 40.0%
CTCCATGTTGTGAGAAAATG+GGG + chr7_1:73180778-73180797 Msa1036730:CDS 40.0%
! AACCCCATTTTCTCACAACA+TGG - chr7_1:73180783-73180802 None:intergenic 40.0%
GAGAAAATGGGGTTGAAGAA+AGG + chr7_1:73180789-73180808 Msa1036730:CDS 40.0%
!! AAAATGGTACCGGCTTGTTT+GGG - chr7_1:73180891-73180910 None:intergenic 40.0%
!! AAAAATGGTACCGGCTTGTT+TGG - chr7_1:73180892-73180911 None:intergenic 40.0%
TTAGGGGGAAAAAATGGTAC+CGG - chr7_1:73180901-73180920 None:intergenic 40.0%
AAAGAGTTGCAGATTGCGAT+GGG + chr7_1:73181053-73181072 Msa1036730:CDS 40.0%
! ATGGGCAAATTATCTGAAGC+CGG + chr7_1:73181071-73181090 Msa1036730:CDS 40.0%
TGCATCAAATGTTGGGAAAC+AGG + chr7_1:73181145-73181164 Msa1036730:CDS 40.0%
GCAGAATATTAGCTAGGTAG+TGG - chr7_1:73181194-73181213 None:intergenic 40.0%
ACCTAGCTAATATTCTGCTC+TGG + chr7_1:73181196-73181215 Msa1036730:intron 40.0%
TCCAGAGCAGAATATTAGCT+AGG - chr7_1:73181200-73181219 None:intergenic 40.0%
! TCTGGATAGCATTGAACTGA+TGG + chr7_1:73181214-73181233 Msa1036730:intron 40.0%
ATTGGTACAGATGGATACGT+CGG + chr7_1:73181647-73181666 Msa1036730:intron 40.0%
! TGGCAGCCTTTTCTTCAAAT+GGG - chr7_1:73182172-73182191 None:intergenic 40.0%
!! TTTGGTGTCTTGGTCTGAAT+TGG - chr7_1:73182271-73182290 None:intergenic 40.0%
!! TTTGTTCCTGTTTGGTGTCT+TGG - chr7_1:73182281-73182300 None:intergenic 40.0%
! CATTGAGACAAGTGGTGTTA+TGG + chr7_1:73182497-73182516 Msa1036730:CDS 40.0%
!! ACAAGTGGTGTTATGGACAT+TGG + chr7_1:73182504-73182523 Msa1036730:CDS 40.0%
ACTCCTTCTTCAGTTGCTAA+TGG - chr7_1:73182555-73182574 None:intergenic 40.0%
! TGCCTACATTTTCTGCATCT+AGG + chr7_1:73182810-73182829 Msa1036730:three_prime_UTR 40.0%
TGCCTAGATGCAGAAAATGT+AGG - chr7_1:73182815-73182834 None:intergenic 40.0%
! GTGTCACCTTTTGATCAAGT+TGG + chr7_1:73180648-73180667 Msa1036730:five_prime_UTR 40.0%
AGCTCCATGTTGTGAGAAAA+TGG + chr7_1:73180776-73180795 Msa1036730:CDS 40.0%
GCTCCATGTTGTGAGAAAAT+GGG + chr7_1:73180777-73180796 Msa1036730:CDS 40.0%
CTCCATGTTGTGAGAAAATG+GGG + chr7_1:73180778-73180797 Msa1036730:CDS 40.0%
! AACCCCATTTTCTCACAACA+TGG - chr7_1:73180783-73180802 None:intergenic 40.0%
GAGAAAATGGGGTTGAAGAA+AGG + chr7_1:73180789-73180808 Msa1036730:CDS 40.0%
!! AAAATGGTACCGGCTTGTTT+GGG - chr7_1:73180891-73180910 None:intergenic 40.0%
!! AAAAATGGTACCGGCTTGTT+TGG - chr7_1:73180892-73180911 None:intergenic 40.0%
TTAGGGGGAAAAAATGGTAC+CGG - chr7_1:73180901-73180920 None:intergenic 40.0%
AAAGAGTTGCAGATTGCGAT+GGG + chr7_1:73181053-73181072 Msa1036730:CDS 40.0%
! ATGGGCAAATTATCTGAAGC+CGG + chr7_1:73181071-73181090 Msa1036730:CDS 40.0%
TGCATCAAATGTTGGGAAAC+AGG + chr7_1:73181145-73181164 Msa1036730:CDS 40.0%
GCAGAATATTAGCTAGGTAG+TGG - chr7_1:73181194-73181213 None:intergenic 40.0%
ACCTAGCTAATATTCTGCTC+TGG + chr7_1:73181196-73181215 Msa1036730:intron 40.0%
TCCAGAGCAGAATATTAGCT+AGG - chr7_1:73181200-73181219 None:intergenic 40.0%
! TCTGGATAGCATTGAACTGA+TGG + chr7_1:73181214-73181233 Msa1036730:intron 40.0%
ATTGGTACAGATGGATACGT+CGG + chr7_1:73181647-73181666 Msa1036730:intron 40.0%
! TGGCAGCCTTTTCTTCAAAT+GGG - chr7_1:73182172-73182191 None:intergenic 40.0%
!! TTTGGTGTCTTGGTCTGAAT+TGG - chr7_1:73182271-73182290 None:intergenic 40.0%
!! TTTGTTCCTGTTTGGTGTCT+TGG - chr7_1:73182281-73182300 None:intergenic 40.0%
! CATTGAGACAAGTGGTGTTA+TGG + chr7_1:73182497-73182516 Msa1036730:CDS 40.0%
!! ACAAGTGGTGTTATGGACAT+TGG + chr7_1:73182504-73182523 Msa1036730:CDS 40.0%
ACTCCTTCTTCAGTTGCTAA+TGG - chr7_1:73182555-73182574 None:intergenic 40.0%
! TGCCTACATTTTCTGCATCT+AGG + chr7_1:73182810-73182829 Msa1036730:three_prime_UTR 40.0%
TGCCTAGATGCAGAAAATGT+AGG - chr7_1:73182815-73182834 None:intergenic 40.0%
CGATCTTCTTCTGTAGTCCA+TGG - chr7_1:73180816-73180835 None:intergenic 45.0%
TCAACAGGATTGCTAAGGTG+TGG + chr7_1:73181030-73181049 Msa1036730:intron 45.0%
GAAAGAGTTGCAGATTGCGA+TGG + chr7_1:73181052-73181071 Msa1036730:CDS 45.0%
! ATCTGAAGCCGGATATCAAG+CGG + chr7_1:73181082-73181101 Msa1036730:CDS 45.0%
AAGTTACCCCGCTTGATATC+CGG - chr7_1:73181093-73181112 None:intergenic 45.0%
! GGATAGCATTGAACTGATGG+AGG + chr7_1:73181217-73181236 Msa1036730:intron 45.0%
GATGGTCAACTATTGCAGCA+AGG + chr7_1:73182103-73182122 Msa1036730:intron 45.0%
ACTATTGCAGCAAGGTTACC+TGG + chr7_1:73182111-73182130 Msa1036730:CDS 45.0%
ATCTCGTTATCTGTTCGTCC+AGG - chr7_1:73182132-73182151 None:intergenic 45.0%
GGCACACCCATTTGAAGAAA+AGG + chr7_1:73182163-73182182 Msa1036730:CDS 45.0%
! GTGGCAGCCTTTTCTTCAAA+TGG - chr7_1:73182173-73182192 None:intergenic 45.0%
GTCGACATGAAAGTCCAACT+TGG - chr7_1:73182244-73182263 None:intergenic 45.0%
TTCAGACCAAGACACCAAAC+AGG + chr7_1:73182272-73182291 Msa1036730:CDS 45.0%
GCTCCATTAGCAACTGAAGA+AGG + chr7_1:73182549-73182568 Msa1036730:CDS 45.0%
CGTGCCAGAAATCCATATCT+TGG - chr7_1:73182605-73182624 None:intergenic 45.0%
GAAAATGTAGGCAAGTGTGG+AGG - chr7_1:73182803-73182822 None:intergenic 45.0%
GCAGAAAATGTAGGCAAGTG+TGG - chr7_1:73182806-73182825 None:intergenic 45.0%
CGATCTTCTTCTGTAGTCCA+TGG - chr7_1:73180816-73180835 None:intergenic 45.0%
TCAACAGGATTGCTAAGGTG+TGG + chr7_1:73181030-73181049 Msa1036730:intron 45.0%
GAAAGAGTTGCAGATTGCGA+TGG + chr7_1:73181052-73181071 Msa1036730:CDS 45.0%
! ATCTGAAGCCGGATATCAAG+CGG + chr7_1:73181082-73181101 Msa1036730:CDS 45.0%
AAGTTACCCCGCTTGATATC+CGG - chr7_1:73181093-73181112 None:intergenic 45.0%
! GGATAGCATTGAACTGATGG+AGG + chr7_1:73181217-73181236 Msa1036730:intron 45.0%
GATGGTCAACTATTGCAGCA+AGG + chr7_1:73182103-73182122 Msa1036730:intron 45.0%
ACTATTGCAGCAAGGTTACC+TGG + chr7_1:73182111-73182130 Msa1036730:CDS 45.0%
ATCTCGTTATCTGTTCGTCC+AGG - chr7_1:73182132-73182151 None:intergenic 45.0%
GGCACACCCATTTGAAGAAA+AGG + chr7_1:73182163-73182182 Msa1036730:CDS 45.0%
! GTGGCAGCCTTTTCTTCAAA+TGG - chr7_1:73182173-73182192 None:intergenic 45.0%
GTCGACATGAAAGTCCAACT+TGG - chr7_1:73182244-73182263 None:intergenic 45.0%
TTCAGACCAAGACACCAAAC+AGG + chr7_1:73182272-73182291 Msa1036730:CDS 45.0%
GCTCCATTAGCAACTGAAGA+AGG + chr7_1:73182549-73182568 Msa1036730:CDS 45.0%
CGTGCCAGAAATCCATATCT+TGG - chr7_1:73182605-73182624 None:intergenic 45.0%
GAAAATGTAGGCAAGTGTGG+AGG - chr7_1:73182803-73182822 None:intergenic 45.0%
GCAGAAAATGTAGGCAAGTG+TGG - chr7_1:73182806-73182825 None:intergenic 45.0%
!! AAATTAAAATATGAATTTAA+AGG + chr7_1:73180945-73180964 Msa1036730:intron 5.0%
!! AAATTAAAATATGAATTTAA+AGG + chr7_1:73180945-73180964 Msa1036730:intron 5.0%
! TTTGGGAAGAGCACGCCAAT+TGG - chr7_1:73180874-73180893 None:intergenic 50.0%
! TCTGAAGCCGGATATCAAGC+GGG + chr7_1:73181083-73181102 Msa1036730:CDS 50.0%
GGTGTCTTGGTCTGAATTGG+AGG - chr7_1:73182268-73182287 None:intergenic 50.0%
GACACGTCACTAGAACACTG+TGG - chr7_1:73182321-73182340 None:intergenic 50.0%
CGATGTTTATGCGAGAGCTG+AGG + chr7_1:73182623-73182642 Msa1036730:CDS 50.0%
! TTTGGGAAGAGCACGCCAAT+TGG - chr7_1:73180874-73180893 None:intergenic 50.0%
! TCTGAAGCCGGATATCAAGC+GGG + chr7_1:73181083-73181102 Msa1036730:CDS 50.0%
GGTGTCTTGGTCTGAATTGG+AGG - chr7_1:73182268-73182287 None:intergenic 50.0%
GACACGTCACTAGAACACTG+TGG - chr7_1:73182321-73182340 None:intergenic 50.0%
CGATGTTTATGCGAGAGCTG+AGG + chr7_1:73182623-73182642 Msa1036730:CDS 50.0%
TGGGGTTGAAGAAAGGGCCA+TGG + chr7_1:73180796-73180815 Msa1036730:CDS 55.0%
CGTGCTCTTCCCAAACAAGC+CGG + chr7_1:73180879-73180898 Msa1036730:CDS 55.0%
CTGAAGCCGGATATCAAGCG+GGG + chr7_1:73181084-73181103 Msa1036730:CDS 55.0%
TGGGGTTGAAGAAAGGGCCA+TGG + chr7_1:73180796-73180815 Msa1036730:CDS 55.0%
CGTGCTCTTCCCAAACAAGC+CGG + chr7_1:73180879-73180898 Msa1036730:CDS 55.0%
CTGAAGCCGGATATCAAGCG+GGG + chr7_1:73181084-73181103 Msa1036730:CDS 55.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 73180616 73182855 73180616 ID=Msa1036730;Name=Msa1036730
chr7_1 mRNA 73180616 73182855 73180616 ID=Msa1036730-mRNA-1;Parent=Msa1036730;Name=Msa1036730-mRNA-1;_AED=0.02;_eAED=0.02;_QI=152|1|1|1|1|1|3|184|276
chr7_1 exon 73180616 73180900 73180616 ID=Msa1036730-mRNA-1:exon:17932;Parent=Msa1036730-mRNA-1
chr7_1 exon 73181037 73181166 73181037 ID=Msa1036730-mRNA-1:exon:17933;Parent=Msa1036730-mRNA-1
chr7_1 exon 73182104 73182855 73182104 ID=Msa1036730-mRNA-1:exon:17934;Parent=Msa1036730-mRNA-1
chr7_1 five_prime_UTR 73180616 73180767 73180616 ID=Msa1036730-mRNA-1:five_prime_utr;Parent=Msa1036730-mRNA-1
chr7_1 CDS 73180768 73180900 73180768 ID=Msa1036730-mRNA-1:cds;Parent=Msa1036730-mRNA-1
chr7_1 CDS 73181037 73181166 73181037 ID=Msa1036730-mRNA-1:cds;Parent=Msa1036730-mRNA-1
chr7_1 CDS 73182104 73182671 73182104 ID=Msa1036730-mRNA-1:cds;Parent=Msa1036730-mRNA-1
chr7_1 three_prime_UTR 73182672 73182855 73182672 ID=Msa1036730-mRNA-1:three_prime_utr;Parent=Msa1036730-mRNA-1
Gene Sequence

>Msa1036730

ATGGGAAGAGCTCCATGTTGTGAGAAAATGGGGTTGAAGAAAGGGCCATGGACTACAGAAGAAGATCGAATCCTCATCAATCACATAAACACTTATGGTCATTCCAATTGGCGTGCTCTTCCCAAACAAGCCGGATTGCTAAGGTGTGGAAAGAGTTGCAGATTGCGATGGGCAAATTATCTGAAGCCGGATATCAAGCGGGGTAACTTCACCAAAGAAGAAGAGGATGCAATAATCAATTTGCATCAAATGTTGGGAAACAGATGGTCAACTATTGCAGCAAGGTTACCTGGACGAACAGATAACGAGATAAAAAATGTATGGCACACCCATTTGAAGAAAAGGCTGCCACAAAACCAACATGAACACAACAACAGTACAAAACGAAACAAAAAACAAACCAAGTTGGACTTTCATGTCGACGCCTCCAATTCAGACCAAGACACCAAACAGGAACAAAATCATGAAGATGATAGGCCACAGTGTTCTAGTGACGTGTCATCACATAATAATAGTAGCATTGCTACTTCAAATAATGATATAAGTTACAATAATATCAACAACAACAATAATAATGATGTTGTTGATTCGGCAGAAAATAATTTTGCATTGGATGATGATTTTTGGTGTGAAGTTTTGTCATCTGATAATTCTAGCATTGAGACAAGTGGTGTTATGGACATTGGTGTTGATAATTATCAATTTCAAGCTCCATTAGCAACTGAAGAAGGAGTTTTTGATTCTAGTTCATCGAGTTTATGCCAAGATATGGATTTCTGGCACGATGTTTATGCGAGAGCTGAGGAAATAACTGAGTTACTAGAATTATGA

Protein sequence

>Msa1036730

MGRAPCCEKMGLKKGPWTTEEDRILINHINTYGHSNWRALPKQAGLLRCGKSCRLRWANYLKPDIKRGNFTKEEEDAIINLHQMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLPQNQHEHNNSTKRNKKQTKLDFHVDASNSDQDTKQEQNHEDDRPQCSSDVSSHNNSSIATSNNDISYNNINNNNNNDVVDSAENNFALDDDFWCEVLSSDNSSIETSGVMDIGVDNYQFQAPLATEEGVFDSSSSSLCQDMDFWHDVYARAEEITELLEL*