Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1037100 | XP_039685680.1 | 84.856 | 799 | 101 | 3 | 1 | 779 | 1 | 799 | 0.0 | 1390 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1037100 | sp|Q9SZL8|FRS5_ARATH | 27.769 | 641 | 383 | 14 | 32 | 665 | 70 | 637 | 3.36e-69 | 246 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1037100 | D3YBB9 | 76.456 | 807 | 173 | 4 | 1 | 798 | 49 | 847 | 0.0 | 1283 |
Gene ID | Type | Classification |
---|---|---|
Msa1037100 | TF | FAR1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1037100 | MtrunA17_Chr3g0088371 | 83.152 | 184 | 28 | 1 | 618 | 798 | 1 | 184 | 1.05e-102 | 314 |
Msa1037100 | MtrunA17_Chr3g0082121 | 31.693 | 691 | 384 | 17 | 41 | 727 | 49 | 655 | 8.05e-101 | 327 |
Msa1037100 | MtrunA17_Chr2g0324011 | 30.551 | 635 | 365 | 12 | 36 | 665 | 8 | 571 | 2.05e-100 | 323 |
Msa1037100 | MtrunA17_Chr1g0202341 | 29.764 | 635 | 365 | 18 | 34 | 662 | 50 | 609 | 5.76e-80 | 271 |
Msa1037100 | MtrunA17_Chr8g0363841 | 28.776 | 629 | 375 | 13 | 40 | 665 | 22 | 580 | 5.33e-75 | 257 |
Msa1037100 | MtrunA17_Chr1g0203721 | 26.026 | 780 | 452 | 20 | 1 | 739 | 16 | 711 | 4.60e-73 | 256 |
Msa1037100 | MtrunA17_Chr2g0296781 | 27.688 | 679 | 405 | 20 | 39 | 708 | 1 | 602 | 1.65e-68 | 240 |
Msa1037100 | MtrunA17_Chr5g0448761 | 25.318 | 707 | 449 | 14 | 31 | 728 | 56 | 692 | 1.96e-68 | 241 |
Msa1037100 | MtrunA17_Chr6g0458391 | 26.984 | 630 | 357 | 15 | 41 | 662 | 231 | 765 | 1.84e-65 | 233 |
Msa1037100 | MtrunA17_Chr6g0477261 | 29.412 | 527 | 314 | 14 | 180 | 699 | 7 | 482 | 9.62e-65 | 228 |
Msa1037100 | MtrunA17_Chr1g0164591 | 35.312 | 320 | 192 | 4 | 131 | 448 | 1 | 307 | 1.18e-62 | 213 |
Msa1037100 | MtrunA17_Chr2g0287651 | 25.755 | 629 | 387 | 13 | 39 | 662 | 79 | 632 | 1.04e-60 | 221 |
Msa1037100 | MtrunA17_Chr5g0441581 | 24.967 | 757 | 460 | 21 | 32 | 773 | 26 | 689 | 1.49e-58 | 212 |
Msa1037100 | MtrunA17_Chr5g0440451 | 24.542 | 709 | 426 | 17 | 34 | 721 | 42 | 662 | 7.35e-56 | 207 |
Msa1037100 | MtrunA17_Chr7g0258861 | 35.948 | 306 | 172 | 6 | 36 | 336 | 8 | 294 | 5.73e-54 | 189 |
Msa1037100 | MtrunA17_Chr1g0207551 | 24.821 | 697 | 430 | 17 | 31 | 718 | 30 | 641 | 7.65e-54 | 200 |
Msa1037100 | MtrunA17_Chr1g0172971 | 81.197 | 117 | 21 | 1 | 1 | 116 | 1 | 117 | 1.03e-53 | 195 |
Msa1037100 | MtrunA17_Chr2g0329031 | 25.776 | 644 | 382 | 18 | 23 | 658 | 2 | 557 | 3.29e-53 | 197 |
Msa1037100 | MtrunA17_Chr1g0198761 | 27.147 | 652 | 379 | 19 | 26 | 660 | 38 | 610 | 4.63e-53 | 197 |
Msa1037100 | MtrunA17_Chr1g0196541 | 24.880 | 627 | 397 | 16 | 39 | 662 | 1 | 556 | 2.48e-52 | 194 |
Msa1037100 | MtrunA17_Chr3g0118611 | 27.634 | 503 | 304 | 10 | 221 | 719 | 111 | 557 | 4.16e-52 | 194 |
Msa1037100 | MtrunA17_Chr3g0080351 | 23.724 | 725 | 449 | 15 | 34 | 752 | 75 | 701 | 8.52e-49 | 185 |
Msa1037100 | MtrunA17_Chr2g0287061 | 24.066 | 669 | 377 | 19 | 41 | 694 | 189 | 741 | 4.21e-48 | 183 |
Msa1037100 | MtrunA17_Chr2g0290391 | 26.168 | 642 | 371 | 20 | 38 | 660 | 54 | 611 | 1.86e-47 | 180 |
Msa1037100 | MtrunA17_Chr1g0203051 | 22.373 | 590 | 389 | 8 | 50 | 637 | 94 | 616 | 7.52e-47 | 177 |
Msa1037100 | MtrunA17_Chr5g0448511 | 25.442 | 452 | 283 | 10 | 216 | 665 | 1 | 400 | 2.05e-43 | 166 |
Msa1037100 | MtrunA17_Chr5g0431001 | 28.160 | 451 | 279 | 12 | 40 | 473 | 66 | 488 | 1.92e-42 | 162 |
Msa1037100 | MtrunA17_Chr2g0291591 | 26.253 | 499 | 312 | 14 | 16 | 499 | 44 | 501 | 2.20e-42 | 163 |
Msa1037100 | MtrunA17_Chr2g0276841 | 27.092 | 502 | 321 | 15 | 49 | 536 | 84 | 554 | 7.07e-42 | 163 |
Msa1037100 | MtrunA17_Chr6g0475591 | 91.781 | 73 | 6 | 0 | 188 | 260 | 1 | 73 | 1.35e-40 | 143 |
Msa1037100 | MtrunA17_Chr2g0291581 | 23.923 | 627 | 396 | 14 | 38 | 662 | 74 | 621 | 1.68e-40 | 159 |
Msa1037100 | MtrunA17_Chr2g0294841 | 26.640 | 503 | 316 | 15 | 3 | 482 | 7 | 479 | 1.43e-35 | 144 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1037100 | AT4G38180.1 | 27.769 | 641 | 383 | 14 | 32 | 665 | 70 | 637 | 3.42e-70 | 246 |
Msa1037100 | AT4G15090.1 | 25.144 | 696 | 434 | 15 | 50 | 741 | 66 | 678 | 9.98e-60 | 218 |
Msa1037100 | AT4G15090.5 | 25.144 | 696 | 434 | 15 | 50 | 741 | 66 | 678 | 9.98e-60 | 218 |
Msa1037100 | AT4G15090.3 | 25.144 | 696 | 434 | 15 | 50 | 741 | 66 | 678 | 9.98e-60 | 218 |
Msa1037100 | AT4G15090.2 | 25.144 | 696 | 434 | 15 | 50 | 741 | 66 | 678 | 9.98e-60 | 218 |
Msa1037100 | AT4G15090.4 | 25.144 | 696 | 434 | 15 | 50 | 741 | 66 | 678 | 9.98e-60 | 218 |
Msa1037100 | AT2G27110.2 | 25.070 | 714 | 423 | 19 | 10 | 719 | 29 | 634 | 1.07e-53 | 200 |
Msa1037100 | AT2G27110.1 | 25.070 | 714 | 423 | 19 | 10 | 719 | 29 | 634 | 1.07e-53 | 200 |
Msa1037100 | AT2G27110.3 | 27.308 | 509 | 313 | 11 | 213 | 719 | 36 | 489 | 4.89e-53 | 196 |
Msa1037100 | AT3G06250.2 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 5.76e-52 | 194 |
Msa1037100 | AT3G06250.1 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 5.76e-52 | 194 |
Msa1037100 | AT3G06250.3 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 5.76e-52 | 194 |
Msa1037100 | AT1G76320.3 | 24.815 | 677 | 413 | 19 | 50 | 720 | 12 | 598 | 6.43e-50 | 187 |
Msa1037100 | AT1G76320.2 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 1.70e-49 | 187 |
Msa1037100 | AT1G76320.1 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 2.08e-49 | 186 |
Msa1037100 | AT1G76320.4 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 2.08e-49 | 186 |
Msa1037100 | AT3G22170.2 | 22.466 | 730 | 449 | 17 | 34 | 753 | 69 | 691 | 4.30e-47 | 181 |
Msa1037100 | AT3G22170.1 | 22.466 | 730 | 449 | 17 | 34 | 753 | 69 | 691 | 4.30e-47 | 181 |
Msa1037100 | AT5G18960.2 | 24.730 | 647 | 359 | 18 | 24 | 661 | 200 | 727 | 1.54e-46 | 179 |
Msa1037100 | AT5G18960.1 | 24.730 | 647 | 359 | 18 | 24 | 661 | 200 | 727 | 1.54e-46 | 179 |
Msa1037100 | AT4G38170.1 | 25.290 | 431 | 264 | 11 | 235 | 662 | 24 | 399 | 1.10e-43 | 167 |
Msa1037100 | AT5G28530.1 | 24.100 | 639 | 388 | 17 | 40 | 660 | 60 | 619 | 1.33e-41 | 162 |
Msa1037100 | AT1G10240.2 | 24.559 | 623 | 378 | 19 | 49 | 659 | 62 | 604 | 3.99e-41 | 161 |
Msa1037100 | AT1G10240.1 | 24.559 | 623 | 378 | 19 | 49 | 659 | 62 | 604 | 3.99e-41 | 161 |
Msa1037100 | AT5G28530.3 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 8.03e-41 | 160 |
Msa1037100 | AT5G28530.2 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 8.03e-41 | 160 |
Msa1037100 | AT2G32250.5 | 23.356 | 745 | 434 | 19 | 4 | 743 | 10 | 622 | 1.23e-39 | 157 |
Msa1037100 | AT2G32250.2 | 23.356 | 745 | 434 | 19 | 4 | 743 | 10 | 622 | 1.37e-39 | 157 |
Msa1037100 | AT2G32250.4 | 23.356 | 745 | 434 | 19 | 4 | 743 | 10 | 622 | 1.37e-39 | 157 |
Msa1037100 | AT2G32250.6 | 23.356 | 745 | 434 | 19 | 4 | 743 | 10 | 622 | 1.78e-39 | 157 |
Msa1037100 | AT2G32250.1 | 23.356 | 745 | 434 | 19 | 4 | 743 | 10 | 622 | 1.78e-39 | 157 |
Msa1037100 | AT2G32250.3 | 23.356 | 745 | 434 | 19 | 4 | 743 | 10 | 622 | 1.78e-39 | 157 |
Msa1037100 | AT2G32250.8 | 23.319 | 699 | 402 | 17 | 50 | 743 | 12 | 581 | 9.99e-39 | 154 |
Msa1037100 | AT2G32250.7 | 23.319 | 699 | 402 | 17 | 50 | 743 | 12 | 581 | 1.08e-38 | 154 |
Msa1037100 | AT1G80010.1 | 23.913 | 644 | 385 | 21 | 41 | 662 | 101 | 661 | 7.24e-37 | 149 |
Msa1037100 | AT1G52520.1 | 22.080 | 625 | 407 | 16 | 41 | 662 | 91 | 638 | 3.35e-33 | 137 |
Msa1037100 | AT4G19990.5 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.25e-27 | 119 |
Msa1037100 | AT4G19990.5 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.40e-12 | 71.2 |
Msa1037100 | AT4G19990.1 | 28.731 | 268 | 184 | 4 | 219 | 483 | 106 | 369 | 2.35e-27 | 119 |
Msa1037100 | AT4G19990.1 | 35.338 | 133 | 72 | 3 | 591 | 721 | 438 | 558 | 2.30e-12 | 71.2 |
Msa1037100 | AT4G19990.7 | 28.731 | 268 | 184 | 4 | 219 | 483 | 177 | 440 | 2.54e-27 | 119 |
Msa1037100 | AT4G19990.7 | 35.338 | 133 | 72 | 3 | 591 | 721 | 509 | 629 | 2.58e-12 | 71.2 |
Msa1037100 | AT4G19990.3 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.83e-27 | 119 |
Msa1037100 | AT4G19990.3 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.49e-12 | 71.2 |
Msa1037100 | AT4G19990.4 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.83e-27 | 119 |
Msa1037100 | AT4G19990.4 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.49e-12 | 71.2 |
Msa1037100 | AT4G19990.6 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 3.28e-27 | 119 |
Msa1037100 | AT4G19990.6 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.25e-12 | 71.2 |
Msa1037100 | AT4G19990.2 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 3.28e-27 | 119 |
Msa1037100 | AT4G19990.2 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.25e-12 | 71.2 |
Msa1037100 | AT5G28530.4 | 21.781 | 629 | 352 | 20 | 40 | 660 | 60 | 556 | 1.28e-22 | 103 |
Msa1037100 | AT5G28530.5 | 21.622 | 629 | 349 | 21 | 40 | 660 | 60 | 552 | 9.32e-22 | 100 |
Find 123 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 7_1:-73605583 | Msa1037100:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 7_1:+73604757 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 7_1:-73605625 | Msa1037100:CDS |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 7_1:-73606676 | Msa1037100:CDS |
TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 7_1:-73606173 | Msa1037100:intron |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 7_1:-73606140 | Msa1037100:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 7_1:+73606046 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 7_1:+73604763 | None:intergenic |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 7_1:-73605851 | Msa1037100:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 7_1:-73604911 | Msa1037100:CDS |
ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 7_1:+73606028 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 7_1:+73606626 | None:intergenic |
TTGGTTTGAATATTATCTTC+TGG | 0.345646 | 7_1:-73604514 | Msa1037100:three_prime_UTR |
TTTGCTTCTTCCGAGCTATA+AGG | 0.345757 | 7_1:+73604695 | None:intergenic |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 7_1:-73605328 | Msa1037100:CDS |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 7_1:-73605751 | Msa1037100:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 7_1:-73604919 | Msa1037100:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 7_1:-73606619 | Msa1037100:intron |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 7_1:-73606627 | Msa1037100:CDS |
TTTCAATTTATCATATCTAA+TGG | 0.390380 | 7_1:-73607539 | None:intergenic |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 7_1:-73605752 | Msa1037100:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 7_1:+73605035 | None:intergenic |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 7_1:+73607156 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 7_1:-73604771 | Msa1037100:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 7_1:+73604781 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 7_1:-73605451 | Msa1037100:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 7_1:-73604886 | Msa1037100:CDS |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 7_1:-73607385 | Msa1037100:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 7_1:-73605203 | Msa1037100:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 7_1:+73605280 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 7_1:-73607314 | Msa1037100:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 7_1:+73605279 | None:intergenic |
CGTTATGTTTGTAACAAAGA+AGG | 0.427485 | 7_1:-73607231 | Msa1037100:CDS |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 7_1:-73606979 | Msa1037100:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 7_1:-73607097 | Msa1037100:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 7_1:+73606035 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 7_1:-73607114 | Msa1037100:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 7_1:+73605102 | None:intergenic |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 7_1:-73606949 | Msa1037100:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 7_1:-73607460 | Msa1037100:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 7_1:-73605961 | Msa1037100:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 7_1:-73605797 | Msa1037100:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 7_1:-73605202 | Msa1037100:CDS |
AATTCTTGATTGTTATGCAT+TGG | 0.467731 | 7_1:-73604533 | Msa1037100:three_prime_UTR |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 7_1:-73607265 | Msa1037100:CDS |
GGGTTGTCACAGTCGACATT+GGG | 0.480993 | 7_1:-73605245 | Msa1037100:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 7_1:-73606904 | Msa1037100:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 7_1:+73605449 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 7_1:+73607120 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 7_1:-73607327 | Msa1037100:CDS |
CTGTCTGTGAACCATCTGTT+GGG | 0.487793 | 7_1:-73604810 | Msa1037100:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 7_1:-73606836 | Msa1037100:CDS |
CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 7_1:+73607009 | None:intergenic |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 7_1:-73607271 | Msa1037100:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 7_1:-73605435 | Msa1037100:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 7_1:+73606160 | None:intergenic |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 7_1:-73605850 | Msa1037100:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 7_1:-73606823 | Msa1037100:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 7_1:-73605611 | Msa1037100:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 7_1:+73605531 | None:intergenic |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 7_1:-73606917 | Msa1037100:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 7_1:+73606731 | None:intergenic |
GCTGTCTGTGAACCATCTGT+TGG | 0.504047 | 7_1:-73604811 | Msa1037100:CDS |
AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 7_1:+73607021 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 7_1:-73605764 | Msa1037100:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 7_1:-73605266 | Msa1037100:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 7_1:+73606865 | None:intergenic |
GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 7_1:-73605592 | Msa1037100:CDS |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 7_1:-73605746 | Msa1037100:CDS |
TGTCTATAAGATATATAAGT+GGG | 0.514682 | 7_1:-73607061 | Msa1037100:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 7_1:+73605286 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 7_1:+73605643 | None:intergenic |
TAACAAAGAAGGTTTCAAGA+AGG | 0.525236 | 7_1:-73607220 | Msa1037100:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 7_1:-73605265 | Msa1037100:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 7_1:+73605454 | None:intergenic |
GACAGAAATTCCTTATAGCT+CGG | 0.533906 | 7_1:-73604705 | Msa1037100:CDS |
AGGGTTGTCACAGTCGACAT+TGG | 0.538587 | 7_1:-73605246 | Msa1037100:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 7_1:+73605648 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 7_1:-73605434 | Msa1037100:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 7_1:-73607219 | Msa1037100:CDS |
CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 7_1:-73607395 | Msa1037100:CDS |
ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 7_1:+73606015 | None:intergenic |
CTGAAATCCACCATGAATGT+TGG | 0.557140 | 7_1:-73605045 | Msa1037100:CDS |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 7_1:-73606769 | Msa1037100:CDS |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 7_1:-73607436 | Msa1037100:CDS |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 7_1:-73606901 | Msa1037100:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 7_1:-73604959 | Msa1037100:CDS |
ATGTCTATAAGATATATAAG+TGG | 0.572287 | 7_1:-73607062 | Msa1037100:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 7_1:+73605530 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 7_1:+73604799 | None:intergenic |
GAAGCAAAAGAAAGATGATG+AGG | 0.585686 | 7_1:-73604680 | Msa1037100:CDS |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 7_1:+73605509 | None:intergenic |
ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 7_1:-73607471 | Msa1037100:CDS |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 7_1:-73606910 | Msa1037100:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 7_1:-73604918 | Msa1037100:CDS |
ACCATATACACAGACCAGGC+TGG | 0.590176 | 7_1:-73606029 | Msa1037100:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 7_1:-73604923 | Msa1037100:CDS |
GAGGCTTTAACAAATTAAGC+GGG | 0.594536 | 7_1:-73604661 | Msa1037100:exon |
TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 7_1:-73605296 | Msa1037100:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 7_1:+73604843 | None:intergenic |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 7_1:-73606830 | Msa1037100:CDS |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 7_1:-73606916 | Msa1037100:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 7_1:-73606827 | Msa1037100:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 7_1:-73604956 | Msa1037100:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 7_1:-73605533 | Msa1037100:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 7_1:-73605448 | Msa1037100:CDS |
TTGATATCGTTGCGCTTCAG+TGG | 0.611060 | 7_1:+73605011 | None:intergenic |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 7_1:+73607171 | None:intergenic |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 7_1:+73605795 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 7_1:-73606896 | Msa1037100:CDS |
TGAGGCTTTAACAAATTAAG+CGG | 0.628414 | 7_1:-73604662 | Msa1037100:exon |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 7_1:+73605281 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 7_1:-73605960 | Msa1037100:CDS |
TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 7_1:+73605038 | None:intergenic |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 7_1:-73605610 | Msa1037100:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 7_1:+73605060 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 7_1:+73605489 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 7_1:-73604934 | Msa1037100:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 7_1:+73605184 | None:intergenic |
TCAAACCATATACACAGACC+AGG | 0.671057 | 7_1:-73606033 | Msa1037100:CDS |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 7_1:-73605201 | Msa1037100:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 7_1:-73605350 | Msa1037100:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 7_1:-73605349 | Msa1037100:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGTTTTTTATGTTATAAGTT+AGG | - | chr7_1:73607408-73607427 | Msa1037100:CDS | 15.0% |
!! | TTTAATTATGCATATAACAC+TGG | - | chr7_1:73604712-73604731 | Msa1037100:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | - | chr7_1:73604768-73604787 | Msa1037100:CDS | 20.0% |
!! | ATGTCTATAAGATATATAAG+TGG | - | chr7_1:73604977-73604996 | Msa1037100:CDS | 20.0% |
!! | TGTCTATAAGATATATAAGT+GGG | - | chr7_1:73604978-73604997 | Msa1037100:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | - | chr7_1:73605567-73605586 | Msa1037100:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | - | chr7_1:73605595-73605614 | Msa1037100:CDS | 20.0% |
!!! | TTTTGATGAGTTAACTAATT+TGG | - | chr7_1:73606147-73606166 | Msa1037100:CDS | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | - | chr7_1:73606217-73606236 | Msa1037100:intron | 20.0% |
! | TGAAAATTCAGTTATTGATG+CGG | - | chr7_1:73604603-73604622 | Msa1037100:three_prime_UTR | 25.0% |
! | CATTTAGTGATAAAGAATCA+TGG | - | chr7_1:73604644-73604663 | Msa1037100:three_prime_UTR | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | + | chr7_1:73604764-73604783 | None:intergenic | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | - | chr7_1:73604774-73604793 | Msa1037100:CDS | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | - | chr7_1:73605090-73605109 | Msa1037100:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | - | chr7_1:73605412-73605431 | Msa1037100:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | + | chr7_1:73605438-73605457 | None:intergenic | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | - | chr7_1:73605485-73605504 | Msa1037100:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | - | chr7_1:73605587-73605606 | Msa1037100:CDS | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | - | chr7_1:73605594-73605613 | Msa1037100:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | - | chr7_1:73605843-73605862 | Msa1037100:CDS | 25.0% |
! | AAAACACCTTGAAAAACATT+CGG | + | chr7_1:73606055-73606074 | None:intergenic | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | - | chr7_1:73606221-73606240 | Msa1037100:intron | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | - | chr7_1:73606414-73606433 | Msa1037100:intron | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | + | chr7_1:73606553-73606572 | None:intergenic | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | + | chr7_1:73606588-73606607 | None:intergenic | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | - | chr7_1:73606588-73606607 | Msa1037100:intron | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | - | chr7_1:73606689-73606708 | Msa1037100:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | - | chr7_1:73606690-73606709 | Msa1037100:CDS | 25.0% |
! | TGATGCTTTAACTAAAAAAG+CGG | - | chr7_1:73607439-73607458 | Msa1037100:CDS | 25.0% |
! | AATTCTTGATTGTTATGCAT+TGG | - | chr7_1:73607506-73607525 | Msa1037100:five_prime_UTR | 25.0% |
ATATTAACTTCATCTGAGAG+TGG | - | chr7_1:73604568-73604587 | Msa1037100:three_prime_UTR | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | - | chr7_1:73604654-73604673 | Msa1037100:exon | 30.0% | |
CGTTATGTTTGTAACAAAGA+AGG | - | chr7_1:73604808-73604827 | Msa1037100:CDS | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | - | chr7_1:73604819-73604838 | Msa1037100:CDS | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | - | chr7_1:73604820-73604839 | Msa1037100:CDS | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | - | chr7_1:73604909-73604928 | Msa1037100:CDS | 30.0% | |
! | AGCTGGAATATATTTGAAGT+TGG | - | chr7_1:73604942-73604961 | Msa1037100:CDS | 30.0% |
! | AAATGCTCTGGTTTATGTAA+TGG | + | chr7_1:73605021-73605040 | None:intergenic | 30.0% |
AGAACATCTTATGAAGTGAT+GGG | - | chr7_1:73605123-73605142 | Msa1037100:CDS | 30.0% | |
! | GAATCTTCCTTTTCGATTTT+CGG | - | chr7_1:73605167-73605186 | Msa1037100:CDS | 30.0% |
TTTAAGTCCGAAAATCGAAA+AGG | + | chr7_1:73605177-73605196 | None:intergenic | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | + | chr7_1:73605291-73605310 | None:intergenic | 30.0% | |
!!! | AAGACATAGCCAGTATTTTT+TGG | - | chr7_1:73605325-73605344 | Msa1037100:CDS | 30.0% |
!!! | AGACATAGCCAGTATTTTTT+GGG | - | chr7_1:73605326-73605345 | Msa1037100:CDS | 30.0% |
CAACAAGATTATGCTCTATT+TGG | - | chr7_1:73605363-73605382 | Msa1037100:CDS | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | + | chr7_1:73605416-73605435 | None:intergenic | 30.0% | |
AACAATAAATATCGGCCATT+AGG | - | chr7_1:73605420-73605439 | Msa1037100:CDS | 30.0% | |
!! | ATGTTCTGGTTTAGAATTGA+AGG | - | chr7_1:73605499-73605518 | Msa1037100:CDS | 30.0% |
CTGGTATATGTGTGTTAATT+TGG | - | chr7_1:73605524-73605543 | Msa1037100:CDS | 30.0% | |
AAACACATATGATCTTTCCA+TGG | + | chr7_1:73605658-73605677 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | - | chr7_1:73605802-73605821 | Msa1037100:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | + | chr7_1:73605882-73605901 | None:intergenic | 30.0% | |
! | TATGGTTTGAGGTTTCTTAT+TGG | + | chr7_1:73605996-73606015 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | - | chr7_1:73606046-73606065 | Msa1037100:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | - | chr7_1:73606058-73606077 | Msa1037100:CDS | 30.0% |
GAGAATGCAAAGAAAAATCT+CGG | - | chr7_1:73606103-73606122 | Msa1037100:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | - | chr7_1:73606188-73606207 | Msa1037100:intron | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | - | chr7_1:73606189-73606208 | Msa1037100:intron | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | + | chr7_1:73606399-73606418 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | + | chr7_1:73606533-73606552 | None:intergenic | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | + | chr7_1:73606593-73606612 | None:intergenic | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | - | chr7_1:73606591-73606610 | Msa1037100:intron | 30.0% | |
! | CAAAGTTTTCACAATTGAGA+AGG | - | chr7_1:73606648-73606667 | Msa1037100:CDS | 30.0% |
ATTATGATCTTCAAACCTTG+GGG | + | chr7_1:73606761-73606780 | None:intergenic | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | + | chr7_1:73606762-73606781 | None:intergenic | 30.0% | |
!! | ATCATAATCGACTTGATGAA+AGG | - | chr7_1:73606773-73606792 | Msa1037100:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | - | chr7_1:73606774-73606793 | Msa1037100:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | - | chr7_1:73606870-73606889 | Msa1037100:CDS | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | - | chr7_1:73606873-73606892 | Msa1037100:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | - | chr7_1:73606938-73606957 | Msa1037100:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | - | chr7_1:73607105-73607124 | Msa1037100:CDS | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | - | chr7_1:73607153-73607172 | Msa1037100:CDS | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr7_1:73607261-73607280 | None:intergenic | 30.0% |
AAGAAAGACCAAATCCAATT+AGG | - | chr7_1:73607268-73607287 | Msa1037100:CDS | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | + | chr7_1:73607279-73607298 | None:intergenic | 30.0% | |
! | TGAGGCTTTAACAAATTAAG+CGG | - | chr7_1:73607377-73607396 | Msa1037100:CDS | 30.0% |
!!! | GTGTTTGTTGCTGTTTTCAA+TGG | - | chr7_1:73604540-73604559 | Msa1037100:three_prime_UTR | 35.0% |
ATAACACTGGATTCTCTGTT+AGG | - | chr7_1:73604725-73604744 | Msa1037100:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | - | chr7_1:73604845-73604864 | Msa1037100:CDS | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | + | chr7_1:73604886-73604905 | None:intergenic | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | - | chr7_1:73604903-73604922 | Msa1037100:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | - | chr7_1:73604908-73604927 | Msa1037100:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | - | chr7_1:73605060-73605079 | Msa1037100:CDS | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | - | chr7_1:73605122-73605141 | Msa1037100:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | - | chr7_1:73605203-73605222 | Msa1037100:CDS | 35.0% | |
! | TGGTTTAGAATTGAAGGTTC+TGG | - | chr7_1:73605505-73605524 | Msa1037100:CDS | 35.0% |
CATAAATTCCAAGGCAAGAT+AGG | + | chr7_1:73605625-73605644 | None:intergenic | 35.0% | |
TGTACAGAGCATAAATTCCA+AGG | + | chr7_1:73605634-73605653 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | - | chr7_1:73605899-73605918 | Msa1037100:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | - | chr7_1:73605942-73605961 | Msa1037100:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | - | chr7_1:73606071-73606090 | Msa1037100:CDS | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | - | chr7_1:73606231-73606250 | Msa1037100:intron | 35.0% |
CTCATTCAAATCGTATGCAT+TGG | - | chr7_1:73606275-73606294 | Msa1037100:intron | 35.0% | |
!! | TATGCATTGGTCTTCAGTTT+GGG | - | chr7_1:73606288-73606307 | Msa1037100:intron | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | - | chr7_1:73606358-73606377 | Msa1037100:intron | 35.0% |
ACATTATGGTTCAGAGAATG+AGG | - | chr7_1:73606428-73606447 | Msa1037100:intron | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | - | chr7_1:73606429-73606448 | Msa1037100:intron | 35.0% | |
! | GGTTTCGAATGTTGATGTTT+TGG | - | chr7_1:73606711-73606730 | Msa1037100:CDS | 35.0% |
CGATTATGATCTTCAAACCT+TGG | + | chr7_1:73606763-73606782 | None:intergenic | 35.0% | |
!! | TTCAAGATTTTGGAGGTCTT+AGG | - | chr7_1:73606880-73606899 | Msa1037100:CDS | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | + | chr7_1:73606940-73606959 | None:intergenic | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | - | chr7_1:73606941-73606960 | Msa1037100:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | + | chr7_1:73607207-73607226 | None:intergenic | 35.0% |
GACAGAAATTCCTTATAGCT+CGG | - | chr7_1:73607334-73607353 | Msa1037100:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | - | chr7_1:73607359-73607378 | Msa1037100:CDS | 35.0% | |
! | GAGGCTTTAACAAATTAAGC+GGG | - | chr7_1:73607378-73607397 | Msa1037100:CDS | 35.0% |
ATCTGAGAGTGGACAATTGA+CGG | - | chr7_1:73604579-73604598 | Msa1037100:three_prime_UTR | 40.0% | |
!! | TCACATGTTGGCCTGTTTTT+AGG | + | chr7_1:73604859-73604878 | None:intergenic | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | - | chr7_1:73605129-73605148 | Msa1037100:CDS | 40.0% |
TCCATCTGCCCAAAAAATAC+TGG | + | chr7_1:73605337-73605356 | None:intergenic | 40.0% | |
ATTTATGCTCTGTACAGCCA+TGG | - | chr7_1:73605638-73605657 | Msa1037100:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | - | chr7_1:73605748-73605767 | Msa1037100:CDS | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | + | chr7_1:73605752-73605771 | None:intergenic | 40.0% | |
TTCATTTCAGCTGCCTTTCT+TGG | - | chr7_1:73605866-73605885 | Msa1037100:CDS | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | + | chr7_1:73606007-73606026 | None:intergenic | 40.0% | |
TCAAACCATATACACAGACC+AGG | - | chr7_1:73606006-73606025 | Msa1037100:CDS | 40.0% | |
!! | GTATGCATTGGTCTTCAGTT+TGG | - | chr7_1:73606287-73606306 | Msa1037100:intron | 40.0% |
AATCGAACAAGTGAATGGTC+TGG | + | chr7_1:73606394-73606413 | None:intergenic | 40.0% | |
! | TCATGCTGAGTTGGACTTTA+AGG | - | chr7_1:73606456-73606475 | Msa1037100:intron | 40.0% |
TATGAGGAGGACACAACAAA+AGG | - | chr7_1:73606604-73606623 | Msa1037100:intron | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | - | chr7_1:73606605-73606624 | Msa1037100:intron | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | - | chr7_1:73606743-73606762 | Msa1037100:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | - | chr7_1:73606836-73606855 | Msa1037100:CDS | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | - | chr7_1:73606837-73606856 | Msa1037100:CDS | 40.0% | |
!! | AAGATTTTGGAGGTCTTAGG+TGG | - | chr7_1:73606883-73606902 | Msa1037100:CDS | 40.0% |
GATTTCAGCTTATCGACAGA+CGG | + | chr7_1:73606982-73607001 | None:intergenic | 40.0% | |
CTGAAATCCACCATGAATGT+TGG | - | chr7_1:73606994-73607013 | Msa1037100:CDS | 40.0% | |
TTTAGTGCCAACATTCATGG+TGG | + | chr7_1:73607004-73607023 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | + | chr7_1:73607007-73607026 | None:intergenic | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | - | chr7_1:73607116-73607135 | Msa1037100:CDS | 40.0% | |
! | TGAAGACTTAGAAGGCGTAA+CGG | + | chr7_1:73607199-73607218 | None:intergenic | 40.0% |
AGTCGCTTCTTTGACCTAAT+TGG | + | chr7_1:73607285-73607304 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | + | chr7_1:73607347-73607366 | None:intergenic | 40.0% | |
AGAACTGGACTGTCACATGT+TGG | + | chr7_1:73604871-73604890 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | - | chr7_1:73604913-73604932 | Msa1037100:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | + | chr7_1:73604922-73604941 | None:intergenic | 45.0% | |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | - | chr7_1:73604925-73604944 | Msa1037100:CDS | 45.0% |
CTCAAGTAGCACAAATGCTC+TGG | + | chr7_1:73605033-73605052 | None:intergenic | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | - | chr7_1:73605209-73605228 | Msa1037100:CDS | 45.0% | |
AACTCGTCAAAAGGAGATGG+TGG | - | chr7_1:73605212-73605231 | Msa1037100:CDS | 45.0% | |
AATGAAGCTCTCTCGAAACC+AGG | - | chr7_1:73605270-73605289 | Msa1037100:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | + | chr7_1:73605311-73605330 | None:intergenic | 45.0% | |
!!! | GCCAGTATTTTTTGGGCAGA+TGG | - | chr7_1:73605333-73605352 | Msa1037100:CDS | 45.0% |
AGCCACTTAAAGTCCGAAGT+AGG | + | chr7_1:73606247-73606266 | None:intergenic | 45.0% | |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | - | chr7_1:73606293-73606312 | Msa1037100:intron | 45.0% |
! | GTGAGGTCACATTTTACAGC+TGG | - | chr7_1:73606310-73606329 | Msa1037100:intron | 45.0% |
GAGGGATAATCATGCTGAGT+TGG | - | chr7_1:73606447-73606466 | Msa1037100:intron | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | - | chr7_1:73606506-73606525 | Msa1037100:intron | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | + | chr7_1:73606756-73606775 | None:intergenic | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | - | chr7_1:73606838-73606857 | Msa1037100:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | + | chr7_1:73606858-73606877 | None:intergenic | 45.0% | |
TTGATATCGTTGCGCTTCAG+TGG | + | chr7_1:73607031-73607050 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | - | chr7_1:73607128-73607147 | Msa1037100:CDS | 45.0% | |
CTGTCTGTGAACCATCTGTT+GGG | - | chr7_1:73607229-73607248 | Msa1037100:CDS | 45.0% | |
!! | GAAGTGATGGGTCAAGGAGT+TGG | - | chr7_1:73605135-73605154 | Msa1037100:CDS | 50.0% |
TGGGTGATCCTATCTTGCCT+TGG | - | chr7_1:73605614-73605633 | Msa1037100:CDS | 50.0% | |
ACCATATACACAGACCAGGC+TGG | - | chr7_1:73606010-73606029 | Msa1037100:CDS | 50.0% | |
ACCAGCCTGGTCTGTGTATA+TGG | + | chr7_1:73606014-73606033 | None:intergenic | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | - | chr7_1:73606078-73606097 | Msa1037100:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | - | chr7_1:73606079-73606098 | Msa1037100:CDS | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | - | chr7_1:73606242-73606261 | Msa1037100:intron | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | + | chr7_1:73606511-73606530 | None:intergenic | 50.0% | |
AGGGTTGTCACAGTCGACAT+TGG | - | chr7_1:73606793-73606812 | Msa1037100:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+GGG | - | chr7_1:73606794-73606813 | Msa1037100:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | - | chr7_1:73607080-73607099 | Msa1037100:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | - | chr7_1:73607121-73607140 | Msa1037100:CDS | 50.0% | |
GCTGTCTGTGAACCATCTGT+TGG | - | chr7_1:73607228-73607247 | Msa1037100:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | + | chr7_1:73607243-73607262 | None:intergenic | 50.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | - | chr7_1:73605138-73605157 | Msa1037100:CDS | 55.0% |
! | CGTCAAAAGGAGATGGTGGC+TGG | - | chr7_1:73605216-73605235 | Msa1037100:CDS | 55.0% |
ACTTCAACAACGCACCAGCC+TGG | + | chr7_1:73606027-73606046 | None:intergenic | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | + | chr7_1:73606512-73606531 | None:intergenic | 55.0% | |
CTCAACGGTGTTCTTGAGGC+AGG | - | chr7_1:73607120-73607139 | Msa1037100:CDS | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | - | chr7_1:73607134-73607153 | Msa1037100:CDS | 55.0% | |
GGGTCAAGGAGTTGGAGGCA+CGG | - | chr7_1:73605143-73605162 | Msa1037100:CDS | 60.0% | |
ACGTGTTTGCGCAGATGCGG+AGG | - | chr7_1:73607083-73607102 | Msa1037100:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_1 | gene | 73604514 | 73607547 | 73604514 | ID=Msa1037100;Name=Msa1037100 |
chr7_1 | mRNA | 73604514 | 73607547 | 73604514 | ID=Msa1037100-mRNA-1;Parent=Msa1037100;Name=Msa1037100-mRNA-1;_AED=0.00;_eAED=0.00;_QI=45|1|1|1|1|1|2|152|800 |
chr7_1 | exon | 73604514 | 73606185 | 73604514 | ID=Msa1037100-mRNA-1:exon:18210;Parent=Msa1037100-mRNA-1 |
chr7_1 | exon | 73606620 | 73607547 | 73606620 | ID=Msa1037100-mRNA-1:exon:18209;Parent=Msa1037100-mRNA-1 |
chr7_1 | five_prime_UTR | 73607503 | 73607547 | 73607503 | ID=Msa1037100-mRNA-1:five_prime_utr;Parent=Msa1037100-mRNA-1 |
chr7_1 | CDS | 73606620 | 73607502 | 73606620 | ID=Msa1037100-mRNA-1:cds;Parent=Msa1037100-mRNA-1 |
chr7_1 | CDS | 73604666 | 73606185 | 73604666 | ID=Msa1037100-mRNA-1:cds;Parent=Msa1037100-mRNA-1 |
chr7_1 | three_prime_UTR | 73604514 | 73604665 | 73604514 | ID=Msa1037100-mRNA-1:three_prime_utr;Parent=Msa1037100-mRNA-1 |
Gene Sequence |
Protein sequence |