AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1038470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038470 MtrunA17_Chr7g0273941 85.540 491 40 7 1 484 17 483 0.0 759
Msa1038470 MtrunA17_Chr1g0190851 43.444 511 209 17 37 489 25 513 2.89e-109 336
Msa1038470 MtrunA17_Chr1g0201941 34.843 287 134 8 232 481 274 544 2.23e-39 151
Msa1038470 MtrunA17_Chr1g0201941 44.792 96 43 2 382 477 57 142 1.84e-16 82.4
Msa1038470 MtrunA17_Chr1g0201911 32.364 275 130 9 230 485 229 466 5.66e-32 129
Msa1038470 MtrunA17_Chr1g0201911 42.424 99 47 2 382 480 55 143 1.93e-15 79.0
Msa1038470 MtrunA17_Chr2g0290511 32.941 255 134 10 242 478 114 349 5.70e-31 124
Msa1038470 MtrunA17_Chr6g0463941 54.286 105 39 2 382 486 464 559 1.93e-27 116
Msa1038470 MtrunA17_Chr6g0463941 41.837 98 47 2 382 479 55 142 1.05e-15 80.1
Msa1038470 MtrunA17_Chr7g0265831 39.000 100 50 3 382 480 115 204 4.34e-14 74.7
Msa1038470 MtrunA17_Chr1g0198171 42.268 97 45 3 382 477 114 200 5.78e-14 74.3
Msa1038470 MtrunA17_Chr1g0179191 38.462 104 53 3 382 484 131 224 2.31e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038470 AT5G28300.1 40.564 461 186 13 103 480 103 558 5.89e-75 249
Msa1038470 AT1G76890.2 39.015 264 125 9 226 481 252 487 6.15e-41 155
Msa1038470 AT1G76890.2 36.111 144 76 4 382 519 41 174 4.77e-16 81.6
Msa1038470 AT1G33240.3 34.444 270 132 8 241 478 266 522 8.34e-31 126
Msa1038470 AT1G33240.3 42.708 96 45 2 382 477 62 147 4.03e-17 85.1
Msa1038470 AT1G33240.2 34.444 270 132 8 241 478 227 483 9.56e-31 126
Msa1038470 AT1G33240.1 34.444 270 132 8 241 478 266 522 1.08e-30 127
Msa1038470 AT1G33240.1 42.708 96 45 2 382 477 62 147 3.53e-17 85.1
Msa1038470 AT5G47660.1 31.174 247 142 7 233 478 169 388 2.84e-27 114
Msa1038470 AT1G76880.1 53.000 100 38 2 382 481 408 498 8.91e-26 111
Msa1038470 AT1G76880.1 43.434 99 46 2 382 480 61 149 2.79e-16 82.4
Msa1038470 AT3G10000.1 40.000 100 50 3 382 480 88 178 8.91e-15 77.0
Msa1038470 AT5G03680.1 23.971 413 244 16 103 471 120 506 3.46e-14 75.9
Msa1038470 AT5G03680.1 38.384 99 50 3 382 479 119 207 1.44e-13 73.6
Msa1038470 AT3G10000.2 36.364 99 45 3 382 480 88 168 3.56e-12 68.9

Find 121 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTATTTATGGCTTATT+AGG 0.131965 7_1:-75309339 Msa1038470:five_prime_UTR
AGATTATTAGAAGCATTATT+AGG 0.190543 7_1:+75308066 None:intergenic
AGTAGAAGTACAAGGAATTA+AGG 0.200570 7_1:+75309020 None:intergenic
TTAGATCACGTTGAAAATTA+TGG 0.221677 7_1:-75307183 Msa1038470:three_prime_UTR
GTTGATTGAATTAGAATTAA+AGG 0.228543 7_1:+75308894 None:intergenic
TCTAATTTCTCCATTATTGT+AGG 0.283920 7_1:+75307949 None:intergenic
CCTTGTTGTGCCTACAATAA+TGG 0.294174 7_1:-75307959 Msa1038470:CDS
GAACTGAGTTGTTGAAAATA+AGG 0.299662 7_1:+75307655 None:intergenic
TGTTGAAGGAAATAGTAATA+AGG 0.308788 7_1:-75307839 Msa1038470:CDS
TGATCAACGGTGGTGGAGTT+TGG 0.323663 7_1:+75308863 None:intergenic
AGAAAAGGTCAATGGATTCT+AGG 0.325174 7_1:-75307684 Msa1038470:CDS
TACAATATGACCATTTGAAT+TGG 0.335962 7_1:+75307564 None:intergenic
ATGCGTCATAGAGATCAATT+TGG 0.343924 7_1:-75309409 None:intergenic
GATTATTAGAAGCATTATTA+GGG 0.348088 7_1:+75308067 None:intergenic
TCTGCTATCACATTAGAAAA+AGG 0.348185 7_1:+75308030 None:intergenic
GAATTAAAGGTAGTGGTGTT+AGG 0.362917 7_1:+75308907 None:intergenic
AGGAGTACTACTAGTCTTCT+TGG 0.365345 7_1:-75309093 Msa1038470:CDS
CGAATCATCTTCTTCGTGTT+GGG 0.376149 7_1:+75308455 None:intergenic
CTTGGTGACTGATGGGAGGA+TGG 0.379091 7_1:-75307294 Msa1038470:three_prime_UTR
CTTTGTACATTTGCGATATC+CGG 0.388212 7_1:-75307233 Msa1038470:three_prime_UTR
GTTGGATGTTTGGTTAATTG+AGG 0.388574 7_1:+75307589 None:intergenic
TGAATTGGAGGTTGGATGTT+TGG 0.388613 7_1:+75307579 None:intergenic
GTTGAAGGAAATAGTAATAA+GGG 0.400371 7_1:-75307838 Msa1038470:CDS
TATTCTGTGTCACTTGAGCT+AGG 0.402726 7_1:+75308000 None:intergenic
CTTCTAAACAAAGCTAAAAG+AGG 0.407587 7_1:-75309284 Msa1038470:five_prime_UTR
TACAATAATGGAGAAATTAG+AGG 0.413562 7_1:-75307947 Msa1038470:CDS
GTAGAAGTACAAGGAATTAA+GGG 0.414818 7_1:+75309021 None:intergenic
CAGTCTTCTGATTCTCCAAT+GGG 0.423197 7_1:-75307523 Msa1038470:CDS
TGGGGCAATGATAGTATTGA+TGG 0.430799 7_1:+75308937 None:intergenic
TCGAATCATCTTCTTCGTGT+TGG 0.432686 7_1:+75308454 None:intergenic
TTGGTGACTGATGGGAGGAT+GGG 0.436472 7_1:-75307293 Msa1038470:three_prime_UTR
TCCCATGTGATGAGTTGATC+TGG 0.439124 7_1:+75308769 None:intergenic
CTTGAAGATCACTAACAAAC+CGG 0.444929 7_1:+75308544 None:intergenic
GTTCAAGAATTCAATGATGT+TGG 0.446172 7_1:+75308143 None:intergenic
TGGTGACTGATGGGAGGATG+GGG 0.447305 7_1:-75307292 Msa1038470:three_prime_UTR
AAGTTCGTCGTTAGTCCAGC+TGG 0.453547 7_1:+75308834 None:intergenic
TTAGTTTGAATTCGTTTACT+TGG 0.459025 7_1:-75307387 Msa1038470:three_prime_UTR
CTCTGAAGGAATGTTTGAGT+TGG 0.461517 7_1:-75307797 Msa1038470:CDS
ATGATGAGGAGAATGAGAAT+TGG 0.461876 7_1:+75308996 None:intergenic
AGAAGCAACAATAATGTTGA+AGG 0.463341 7_1:-75307853 Msa1038470:CDS
TCTGAAGGAATGTTTGAGTT+GGG 0.464616 7_1:-75307796 Msa1038470:CDS
AATATGACCATTTGAATTGG+AGG 0.468145 7_1:+75307567 None:intergenic
TGCAGTAAGCTAGCTGAGCT+TGG 0.469341 7_1:-75308663 Msa1038470:intron
TGATGATGACATGGTGATGA+TGG 0.476004 7_1:-75308409 Msa1038470:CDS
TAGTAATAAGGGACCTTTGT+GGG 0.477140 7_1:-75307827 Msa1038470:CDS
GATCTTCAAGATCTTTATCA+AGG 0.479140 7_1:-75308531 Msa1038470:CDS
TGAATTAGAATTAAAGGTAG+TGG 0.482460 7_1:+75308900 None:intergenic
ACGGTGGTGGAGTTTGGATC+TGG 0.484739 7_1:+75308869 None:intergenic
ATTATTTATGGCTTATTAGG+AGG 0.485768 7_1:-75309336 Msa1038470:five_prime_UTR
GAAGAGTGCTCAAAATTGTA+AGG 0.485968 7_1:-75308634 Msa1038470:CDS
CATCCAACCTCCAATTCAAA+TGG 0.490841 7_1:-75307574 Msa1038470:CDS
ATTCTGTGTCACTTGAGCTA+GGG 0.496493 7_1:+75308001 None:intergenic
TCAAGAAAAGCTTGCTAGAG+AGG 0.499159 7_1:-75308244 Msa1038470:CDS
AGTGCCAACACTTCATCTCT+TGG 0.501001 7_1:+75307910 None:intergenic
AATCGTATTTACTACCCCAT+TGG 0.501136 7_1:+75307508 None:intergenic
AGTGGTGTTAGGAGAGTGGT+GGG 0.504430 7_1:+75308918 None:intergenic
CACGGACAGAATGATAGTTA+AGG 0.507146 7_1:+75307145 None:intergenic
TGACCATTTGAATTGGAGGT+TGG 0.512037 7_1:+75307571 None:intergenic
TCAGTCTTCTGATTCTCCAA+TGG 0.512323 7_1:-75307524 Msa1038470:CDS
CTAAAAGAGGAGAGTGTTGT+GGG 0.514492 7_1:-75309271 Msa1038470:five_prime_UTR
TTGTTGTGAATAAGAAGAAA+AGG 0.514743 7_1:-75307699 Msa1038470:CDS
CATGCAATCAGTGAATTAGC+TGG 0.523569 7_1:-75307463 Msa1038470:three_prime_UTR
ATAGTATTGATGGGTGGAAG+AGG 0.526228 7_1:+75308947 None:intergenic
GAATCGATGATCAACGGTGG+TGG 0.526899 7_1:+75308856 None:intergenic
GCAGTAAGCTAGCTGAGCTT+GGG 0.530297 7_1:-75308662 Msa1038470:intron
GAATAAGAAGAAAAGGTCAA+TGG 0.531680 7_1:-75307692 Msa1038470:CDS
AGAAATTAGAGGATAAGAGA+AGG 0.531906 7_1:-75307936 Msa1038470:CDS
CGTTGATCATCGATTCCAGC+TGG 0.533603 7_1:-75308849 Msa1038470:CDS
CAAGATCTTTATCAAGGTGG+TGG 0.535018 7_1:-75308525 Msa1038470:CDS
ATAAGCAGATGGTGAATTCA+CGG 0.538169 7_1:+75307127 None:intergenic
TACAAGGAATTAAGGGTATG+TGG 0.538345 7_1:+75309028 None:intergenic
CCATTATTGTAGGCACAACA+AGG 0.538540 7_1:+75307959 None:intergenic
TCGCAAATGTACAAAGAAGT+AGG 0.540633 7_1:+75307240 None:intergenic
AGGTTTGTTTGAGTTTGAAG+TGG 0.545574 7_1:+75308967 None:intergenic
AGGTAGTGGTGTTAGGAGAG+TGG 0.552440 7_1:+75308914 None:intergenic
TCAACATTTCAAATCTATCA+CGG 0.560758 7_1:+75308355 None:intergenic
GCAAACATGTTGGATGAAAG+AGG 0.561951 7_1:-75309141 Msa1038470:exon
TAGTGGTGTTAGGAGAGTGG+TGG 0.563193 7_1:+75308917 None:intergenic
AGCTTGCTAGAGAGGAAGCA+TGG 0.569276 7_1:-75308236 Msa1038470:CDS
TGCATGTAGAGTAGTAGAGC+TGG 0.574850 7_1:-75309201 Msa1038470:five_prime_UTR
TCCCAGATCAACTCATCACA+TGG 0.578469 7_1:-75308771 Msa1038470:CDS
TAACACTTGTAGTAGACTTG+AGG 0.580589 7_1:+75307881 None:intergenic
GAATCAGAAGACTGAGCTTG+AGG 0.581830 7_1:+75307532 None:intergenic
TTGAACAAATATCTAGCCAC+AGG 0.583846 7_1:-75308126 Msa1038470:CDS
AGGCACAACAAGGGTAGAAG+TGG 0.586674 7_1:+75307969 None:intergenic
ATCTGGGAAGAAATTGTGAA+TGG 0.587163 7_1:+75308786 None:intergenic
CCCATGTGATGAGTTGATCT+GGG 0.588059 7_1:+75308770 None:intergenic
AGAGGTGGTAGCAAACATGT+TGG 0.589579 7_1:-75309151 Msa1038470:exon
GCTAAAAGAGGAGAGTGTTG+TGG 0.597554 7_1:-75309272 Msa1038470:five_prime_UTR
GACAAACGAGAGAGAAAGAG+AGG 0.599365 7_1:-75309237 Msa1038470:five_prime_UTR
TTGAAGATCACTAACAAACC+GGG 0.601696 7_1:+75308545 None:intergenic
AATTAGAGGATAAGAGAAGG+TGG 0.603452 7_1:-75307933 Msa1038470:CDS
TCAGAAGACTGAGCTTGAGG+TGG 0.606482 7_1:+75307535 None:intergenic
GAGTGCTCAAAATTGTAAGG+AGG 0.609238 7_1:-75308631 Msa1038470:CDS
AATTAAGGGTATGTGGTGGA+AGG 0.611381 7_1:+75309035 None:intergenic
TCACATGGGACCATGTCTCA+AGG 0.611393 7_1:-75308756 Msa1038470:intron
ATAGTAATAAGGGACCTTTG+TGG 0.612114 7_1:-75307828 Msa1038470:CDS
GTGGCCAAGAGATGAAGTGT+TGG 0.612713 7_1:-75307914 Msa1038470:CDS
TGAAGTGGAAATTGATGATG+AGG 0.617387 7_1:+75308982 None:intergenic
CTTCAAGATCTTTATCAAGG+TGG 0.622674 7_1:-75308528 Msa1038470:CDS
GATTGAAAGGATGAACATGA+TGG 0.625916 7_1:-75308202 Msa1038470:CDS
TTGTGGGAGAGAATCTCTGA+AGG 0.627055 7_1:-75307811 Msa1038470:CDS
TTTGCTTGGTGACTGATGGG+AGG 0.636516 7_1:-75307298 Msa1038470:three_prime_UTR
ATAATGATAATAATTTCCCC+CGG 0.637802 7_1:-75308563 Msa1038470:CDS
CAGCTGGAATCGATGATCAA+CGG 0.638993 7_1:+75308850 None:intergenic
AAGGAATTAAGGGTATGTGG+TGG 0.651019 7_1:+75309031 None:intergenic
TCAGAGATTCTCTCCCACAA+AGG 0.658578 7_1:+75307814 None:intergenic
TGAAGATCACTAACAAACCG+GGG 0.660207 7_1:+75308546 None:intergenic
ATTGTAATTACCTTGAGACA+TGG 0.660525 7_1:+75308746 None:intergenic
GGGGCAATGATAGTATTGAT+GGG 0.665761 7_1:+75308938 None:intergenic
GAATTGGAAGTAGAAGTACA+AGG 0.671778 7_1:+75309012 None:intergenic
CCCAGATCAACTCATCACAT+GGG 0.681423 7_1:-75308770 Msa1038470:CDS
CATTATTGTAGGCACAACAA+GGG 0.683728 7_1:+75307960 None:intergenic
GCAATGATAGTATTGATGGG+TGG 0.685120 7_1:+75308941 None:intergenic
AGACTGTGATGATGATGACA+TGG 0.699768 7_1:-75308418 Msa1038470:CDS
GATACAAGAGAAGTGCAAAG+AGG 0.707168 7_1:-75307774 Msa1038470:CDS
AGTCTTCTGATTCTCCAATG+GGG 0.718372 7_1:-75307522 Msa1038470:CDS
GAAGATCACTAACAAACCGG+GGG 0.720209 7_1:+75308547 None:intergenic
GTGGTGTTAGGAGAGTGGTG+GGG 0.721834 7_1:+75308919 None:intergenic
CTGGAATCGATGATCAACGG+TGG 0.722514 7_1:+75308853 None:intergenic
AGAAGAAGAAGAATATCCTG+TGG 0.722719 7_1:+75308110 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATTTATGGCTTATT+AGG - chr7_1:75307193-75307212 Msa1038470:three_prime_UTR 15.0%
!! AAAATTATTTATGGCTTATT+AGG - chr7_1:75307193-75307212 Msa1038470:three_prime_UTR 15.0%
!! CGTCACAAAAAAATTATTTA+TGG - chr7_1:75307184-75307203 Msa1038470:three_prime_UTR 20.0%
!! GTTGATTGAATTAGAATTAA+AGG + chr7_1:75307641-75307660 None:intergenic 20.0%
!! ATAAATGTTTCATTGATCTT+TGG - chr7_1:75307818-75307837 Msa1038470:CDS 20.0%
!!! GATTATTAGAAGCATTATTA+GGG + chr7_1:75308468-75308487 None:intergenic 20.0%
!!! AGATTATTAGAAGCATTATT+AGG + chr7_1:75308469-75308488 None:intergenic 20.0%
!!! CAAGTATTTTAAAAAGACAA+AGG - chr7_1:75308807-75308826 Msa1038470:CDS 20.0%
!! AGAGTCCAAAAAATTATTAA+CGG + chr7_1:75309121-75309140 None:intergenic 20.0%
!!! TTTTGATGGAAGAAAAAAAT+GGG + chr7_1:75309171-75309190 None:intergenic 20.0%
!!! ATTTTGATGGAAGAAAAAAA+TGG + chr7_1:75309172-75309191 None:intergenic 20.0%
!!! AGTTGAACTAATTATTTTGA+TGG + chr7_1:75309185-75309204 None:intergenic 20.0%
!!! TTTCTTTTAATTGTTTTGCT+TGG - chr7_1:75309220-75309239 Msa1038470:five_prime_UTR 20.0%
!! CGTCACAAAAAAATTATTTA+TGG - chr7_1:75307184-75307203 Msa1038470:three_prime_UTR 20.0%
!! GTTGATTGAATTAGAATTAA+AGG + chr7_1:75307641-75307660 None:intergenic 20.0%
!! ATAAATGTTTCATTGATCTT+TGG - chr7_1:75307818-75307837 Msa1038470:CDS 20.0%
!!! GATTATTAGAAGCATTATTA+GGG + chr7_1:75308468-75308487 None:intergenic 20.0%
!!! AGATTATTAGAAGCATTATT+AGG + chr7_1:75308469-75308488 None:intergenic 20.0%
!!! CAAGTATTTTAAAAAGACAA+AGG - chr7_1:75308807-75308826 Msa1038470:CDS 20.0%
!! AGAGTCCAAAAAATTATTAA+CGG + chr7_1:75309121-75309140 None:intergenic 20.0%
!!! TTTTGATGGAAGAAAAAAAT+GGG + chr7_1:75309171-75309190 None:intergenic 20.0%
!!! ATTTTGATGGAAGAAAAAAA+TGG + chr7_1:75309172-75309191 None:intergenic 20.0%
!!! AGTTGAACTAATTATTTTGA+TGG + chr7_1:75309185-75309204 None:intergenic 20.0%
!!! TTTCTTTTAATTGTTTTGCT+TGG - chr7_1:75309220-75309239 Msa1038470:five_prime_UTR 20.0%
! ATTATTTATGGCTTATTAGG+AGG - chr7_1:75307196-75307215 Msa1038470:three_prime_UTR 25.0%
!! ATTTTGAATTTGAGCAATTG+AGG - chr7_1:75307419-75307438 Msa1038470:three_prime_UTR 25.0%
! TGAATTAGAATTAAAGGTAG+TGG + chr7_1:75307635-75307654 None:intergenic 25.0%
! ATAATGATAATAATTTCCCC+CGG - chr7_1:75307969-75307988 Msa1038470:CDS 25.0%
! AGAAATCAAAGAACAAAAAG+AGG - chr7_1:75308146-75308165 Msa1038470:CDS 25.0%
! TCAACATTTCAAATCTATCA+CGG + chr7_1:75308180-75308199 None:intergenic 25.0%
! TCTAATTTCTCCATTATTGT+AGG + chr7_1:75308586-75308605 None:intergenic 25.0%
!! TACAATAATGGAGAAATTAG+AGG - chr7_1:75308585-75308604 Msa1038470:CDS 25.0%
! TGTTGAAGGAAATAGTAATA+AGG - chr7_1:75308693-75308712 Msa1038470:intron 25.0%
! GTTGAAGGAAATAGTAATAA+GGG - chr7_1:75308694-75308713 Msa1038470:intron 25.0%
!! AAAGAGGTGTAAAGAAAAAT+GGG - chr7_1:75308774-75308793 Msa1038470:CDS 25.0%
! TTGTTGTGAATAAGAAGAAA+AGG - chr7_1:75308833-75308852 Msa1038470:CDS 25.0%
! TACAATATGACCATTTGAAT+TGG + chr7_1:75308971-75308990 None:intergenic 25.0%
! AGTCCAAAAAATTATTAACG+GGG + chr7_1:75309119-75309138 None:intergenic 25.0%
! GAGTCCAAAAAATTATTAAC+GGG + chr7_1:75309120-75309139 None:intergenic 25.0%
!! TTAGTTTGAATTCGTTTACT+TGG - chr7_1:75309145-75309164 Msa1038470:exon 25.0%
!!! TATTTTTGCACATGATTAAC+CGG + chr7_1:75309321-75309340 None:intergenic 25.0%
! TTAGATCACGTTGAAAATTA+TGG - chr7_1:75309349-75309368 Msa1038470:five_prime_UTR 25.0%
! ATTATTTATGGCTTATTAGG+AGG - chr7_1:75307196-75307215 Msa1038470:three_prime_UTR 25.0%
!! ATTTTGAATTTGAGCAATTG+AGG - chr7_1:75307419-75307438 Msa1038470:three_prime_UTR 25.0%
! TGAATTAGAATTAAAGGTAG+TGG + chr7_1:75307635-75307654 None:intergenic 25.0%
! ATAATGATAATAATTTCCCC+CGG - chr7_1:75307969-75307988 Msa1038470:CDS 25.0%
! AGAAATCAAAGAACAAAAAG+AGG - chr7_1:75308146-75308165 Msa1038470:CDS 25.0%
! TCAACATTTCAAATCTATCA+CGG + chr7_1:75308180-75308199 None:intergenic 25.0%
! TCTAATTTCTCCATTATTGT+AGG + chr7_1:75308586-75308605 None:intergenic 25.0%
!! TACAATAATGGAGAAATTAG+AGG - chr7_1:75308585-75308604 Msa1038470:CDS 25.0%
! TGTTGAAGGAAATAGTAATA+AGG - chr7_1:75308693-75308712 Msa1038470:intron 25.0%
! GTTGAAGGAAATAGTAATAA+GGG - chr7_1:75308694-75308713 Msa1038470:intron 25.0%
!! AAAGAGGTGTAAAGAAAAAT+GGG - chr7_1:75308774-75308793 Msa1038470:CDS 25.0%
! TTGTTGTGAATAAGAAGAAA+AGG - chr7_1:75308833-75308852 Msa1038470:CDS 25.0%
! TACAATATGACCATTTGAAT+TGG + chr7_1:75308971-75308990 None:intergenic 25.0%
! AGTCCAAAAAATTATTAACG+GGG + chr7_1:75309119-75309138 None:intergenic 25.0%
! GAGTCCAAAAAATTATTAAC+GGG + chr7_1:75309120-75309139 None:intergenic 25.0%
!! TTAGTTTGAATTCGTTTACT+TGG - chr7_1:75309145-75309164 Msa1038470:exon 25.0%
!!! TATTTTTGCACATGATTAAC+CGG + chr7_1:75309321-75309340 None:intergenic 25.0%
! TTAGATCACGTTGAAAATTA+TGG - chr7_1:75309349-75309368 Msa1038470:five_prime_UTR 25.0%
! GATTTTGTGATGTGAAAAGA+GGG - chr7_1:75307145-75307164 Msa1038470:three_prime_UTR 30.0%
CTTCTAAACAAAGCTAAAAG+AGG - chr7_1:75307248-75307267 Msa1038470:three_prime_UTR 30.0%
! GTAGAAGTACAAGGAATTAA+GGG + chr7_1:75307514-75307533 None:intergenic 30.0%
! AGTAGAAGTACAAGGAATTA+AGG + chr7_1:75307515-75307534 None:intergenic 30.0%
ATTGTAATTACCTTGAGACA+TGG + chr7_1:75307789-75307808 None:intergenic 30.0%
GATCTTCAAGATCTTTATCA+AGG - chr7_1:75308001-75308020 Msa1038470:CDS 30.0%
GGAAAAAACAAGAGATTGAA+AGG - chr7_1:75308317-75308336 Msa1038470:CDS 30.0%
GTTCAAGAATTCAATGATGT+TGG + chr7_1:75308392-75308411 None:intergenic 30.0%
TCTGCTATCACATTAGAAAA+AGG + chr7_1:75308505-75308524 None:intergenic 30.0%
AGAAATTAGAGGATAAGAGA+AGG - chr7_1:75308596-75308615 Msa1038470:CDS 30.0%
AGAAGCAACAATAATGTTGA+AGG - chr7_1:75308679-75308698 Msa1038470:intron 30.0%
! CAAAGAGGTGTAAAGAAAAA+TGG - chr7_1:75308773-75308792 Msa1038470:CDS 30.0%
GAATAAGAAGAAAAGGTCAA+TGG - chr7_1:75308840-75308859 Msa1038470:CDS 30.0%
GAACTGAGTTGTTGAAAATA+AGG + chr7_1:75308880-75308899 None:intergenic 30.0%
AATATGACCATTTGAATTGG+AGG + chr7_1:75308968-75308987 None:intergenic 30.0%
!!! TTGCCCCGTTAATAATTTTT+TGG - chr7_1:75309113-75309132 Msa1038470:CDS 30.0%
ACATCACAAAATCCAAATTG+AGG + chr7_1:75307138-75307157 None:intergenic 30.0%
! GATTTTGTGATGTGAAAAGA+GGG - chr7_1:75307145-75307164 Msa1038470:three_prime_UTR 30.0%
CTTCTAAACAAAGCTAAAAG+AGG - chr7_1:75307248-75307267 Msa1038470:three_prime_UTR 30.0%
! GTAGAAGTACAAGGAATTAA+GGG + chr7_1:75307514-75307533 None:intergenic 30.0%
! AGTAGAAGTACAAGGAATTA+AGG + chr7_1:75307515-75307534 None:intergenic 30.0%
ATTGTAATTACCTTGAGACA+TGG + chr7_1:75307789-75307808 None:intergenic 30.0%
GATCTTCAAGATCTTTATCA+AGG - chr7_1:75308001-75308020 Msa1038470:CDS 30.0%
GGAAAAAACAAGAGATTGAA+AGG - chr7_1:75308317-75308336 Msa1038470:CDS 30.0%
GTTCAAGAATTCAATGATGT+TGG + chr7_1:75308392-75308411 None:intergenic 30.0%
TCTGCTATCACATTAGAAAA+AGG + chr7_1:75308505-75308524 None:intergenic 30.0%
AGAAATTAGAGGATAAGAGA+AGG - chr7_1:75308596-75308615 Msa1038470:CDS 30.0%
AGAAGCAACAATAATGTTGA+AGG - chr7_1:75308679-75308698 Msa1038470:intron 30.0%
! CAAAGAGGTGTAAAGAAAAA+TGG - chr7_1:75308773-75308792 Msa1038470:CDS 30.0%
GAATAAGAAGAAAAGGTCAA+TGG - chr7_1:75308840-75308859 Msa1038470:CDS 30.0%
GAACTGAGTTGTTGAAAATA+AGG + chr7_1:75308880-75308899 None:intergenic 30.0%
AATATGACCATTTGAATTGG+AGG + chr7_1:75308968-75308987 None:intergenic 30.0%
!!! TTGCCCCGTTAATAATTTTT+TGG - chr7_1:75309113-75309132 Msa1038470:CDS 30.0%
! GGATTTTGTGATGTGAAAAG+AGG - chr7_1:75307144-75307163 Msa1038470:three_prime_UTR 35.0%
GTAGCTGAGTTTGAAAAAAG+AGG - chr7_1:75307363-75307382 Msa1038470:three_prime_UTR 35.0%
! TACAAGGAATTAAGGGTATG+TGG + chr7_1:75307507-75307526 None:intergenic 35.0%
! GAATTGGAAGTAGAAGTACA+AGG + chr7_1:75307523-75307542 None:intergenic 35.0%
ATGATGAGGAGAATGAGAAT+TGG + chr7_1:75307539-75307558 None:intergenic 35.0%
!! TGAAGTGGAAATTGATGATG+AGG + chr7_1:75307553-75307572 None:intergenic 35.0%
! AGGTTTGTTTGAGTTTGAAG+TGG + chr7_1:75307568-75307587 None:intergenic 35.0%
! GAATTAAAGGTAGTGGTGTT+AGG + chr7_1:75307628-75307647 None:intergenic 35.0%
ATCTGGGAAGAAATTGTGAA+TGG + chr7_1:75307749-75307768 None:intergenic 35.0%
TTACTGCACACATCATCATA+AGG + chr7_1:75307857-75307876 None:intergenic 35.0%
!! GAAGAGTGCTCAAAATTGTA+AGG - chr7_1:75307898-75307917 Msa1038470:CDS 35.0%
TTGAAGATCACTAACAAACC+GGG + chr7_1:75307990-75308009 None:intergenic 35.0%
CTTGAAGATCACTAACAAAC+CGG + chr7_1:75307991-75308010 None:intergenic 35.0%
CTTCAAGATCTTTATCAAGG+TGG - chr7_1:75308004-75308023 Msa1038470:CDS 35.0%
!!! TTTTTGTTTTCGTCAGGGTT+TGG + chr7_1:75308055-75308074 None:intergenic 35.0%
!!! GGGTATTTTTGTTTTCGTCA+GGG + chr7_1:75308060-75308079 None:intergenic 35.0%
!!! TGGGTATTTTTGTTTTCGTC+AGG + chr7_1:75308061-75308080 None:intergenic 35.0%
CAAAGAACAAAAAGAGGAAG+AGG - chr7_1:75308152-75308171 Msa1038470:CDS 35.0%
GATTGAAAGGATGAACATGA+TGG - chr7_1:75308330-75308349 Msa1038470:CDS 35.0%
TTGAACAAATATCTAGCCAC+AGG - chr7_1:75308406-75308425 Msa1038470:CDS 35.0%
AGAAGAAGAAGAATATCCTG+TGG + chr7_1:75308425-75308444 None:intergenic 35.0%
CATTATTGTAGGCACAACAA+GGG + chr7_1:75308575-75308594 None:intergenic 35.0%
AATTAGAGGATAAGAGAAGG+TGG - chr7_1:75308599-75308618 Msa1038470:CDS 35.0%
TAACACTTGTAGTAGACTTG+AGG + chr7_1:75308654-75308673 None:intergenic 35.0%
ATAGTAATAAGGGACCTTTG+TGG - chr7_1:75308704-75308723 Msa1038470:intron 35.0%
TAGTAATAAGGGACCTTTGT+GGG - chr7_1:75308705-75308724 Msa1038470:intron 35.0%
! TCTGAAGGAATGTTTGAGTT+GGG - chr7_1:75308736-75308755 Msa1038470:intron 35.0%
! AGAAAAGGTCAATGGATTCT+AGG - chr7_1:75308848-75308867 Msa1038470:CDS 35.0%
GTTGGATGTTTGGTTAATTG+AGG + chr7_1:75308946-75308965 None:intergenic 35.0%
AATCGTATTTACTACCCCAT+TGG + chr7_1:75309027-75309046 None:intergenic 35.0%
TCGCAAATGTACAAAGAAGT+AGG + chr7_1:75309295-75309314 None:intergenic 35.0%
CTTTGTACATTTGCGATATC+CGG - chr7_1:75309299-75309318 Msa1038470:five_prime_UTR 35.0%
! GGATTTTGTGATGTGAAAAG+AGG - chr7_1:75307144-75307163 Msa1038470:three_prime_UTR 35.0%
GTAGCTGAGTTTGAAAAAAG+AGG - chr7_1:75307363-75307382 Msa1038470:three_prime_UTR 35.0%
! TACAAGGAATTAAGGGTATG+TGG + chr7_1:75307507-75307526 None:intergenic 35.0%
! GAATTGGAAGTAGAAGTACA+AGG + chr7_1:75307523-75307542 None:intergenic 35.0%
ATGATGAGGAGAATGAGAAT+TGG + chr7_1:75307539-75307558 None:intergenic 35.0%
!! TGAAGTGGAAATTGATGATG+AGG + chr7_1:75307553-75307572 None:intergenic 35.0%
! AGGTTTGTTTGAGTTTGAAG+TGG + chr7_1:75307568-75307587 None:intergenic 35.0%
! GAATTAAAGGTAGTGGTGTT+AGG + chr7_1:75307628-75307647 None:intergenic 35.0%
ATCTGGGAAGAAATTGTGAA+TGG + chr7_1:75307749-75307768 None:intergenic 35.0%
TTACTGCACACATCATCATA+AGG + chr7_1:75307857-75307876 None:intergenic 35.0%
!! GAAGAGTGCTCAAAATTGTA+AGG - chr7_1:75307898-75307917 Msa1038470:CDS 35.0%
TTGAAGATCACTAACAAACC+GGG + chr7_1:75307990-75308009 None:intergenic 35.0%
CTTGAAGATCACTAACAAAC+CGG + chr7_1:75307991-75308010 None:intergenic 35.0%
CTTCAAGATCTTTATCAAGG+TGG - chr7_1:75308004-75308023 Msa1038470:CDS 35.0%
!!! TTTTTGTTTTCGTCAGGGTT+TGG + chr7_1:75308055-75308074 None:intergenic 35.0%
!!! GGGTATTTTTGTTTTCGTCA+GGG + chr7_1:75308060-75308079 None:intergenic 35.0%
!!! TGGGTATTTTTGTTTTCGTC+AGG + chr7_1:75308061-75308080 None:intergenic 35.0%
CAAAGAACAAAAAGAGGAAG+AGG - chr7_1:75308152-75308171 Msa1038470:CDS 35.0%
GATTGAAAGGATGAACATGA+TGG - chr7_1:75308330-75308349 Msa1038470:CDS 35.0%
TTGAACAAATATCTAGCCAC+AGG - chr7_1:75308406-75308425 Msa1038470:CDS 35.0%
AGAAGAAGAAGAATATCCTG+TGG + chr7_1:75308425-75308444 None:intergenic 35.0%
CATTATTGTAGGCACAACAA+GGG + chr7_1:75308575-75308594 None:intergenic 35.0%
AATTAGAGGATAAGAGAAGG+TGG - chr7_1:75308599-75308618 Msa1038470:CDS 35.0%
TAACACTTGTAGTAGACTTG+AGG + chr7_1:75308654-75308673 None:intergenic 35.0%
ATAGTAATAAGGGACCTTTG+TGG - chr7_1:75308704-75308723 Msa1038470:intron 35.0%
TAGTAATAAGGGACCTTTGT+GGG - chr7_1:75308705-75308724 Msa1038470:intron 35.0%
! TCTGAAGGAATGTTTGAGTT+GGG - chr7_1:75308736-75308755 Msa1038470:intron 35.0%
! AGAAAAGGTCAATGGATTCT+AGG - chr7_1:75308848-75308867 Msa1038470:CDS 35.0%
GTTGGATGTTTGGTTAATTG+AGG + chr7_1:75308946-75308965 None:intergenic 35.0%
AATCGTATTTACTACCCCAT+TGG + chr7_1:75309027-75309046 None:intergenic 35.0%
TCGCAAATGTACAAAGAAGT+AGG + chr7_1:75309295-75309314 None:intergenic 35.0%
CTTTGTACATTTGCGATATC+CGG - chr7_1:75309299-75309318 Msa1038470:five_prime_UTR 35.0%
!! CTAAAAGAGGAGAGTGTTGT+GGG - chr7_1:75307261-75307280 Msa1038470:three_prime_UTR 40.0%
GCTGAGTTTGAAAAAAGAGG+TGG - chr7_1:75307366-75307385 Msa1038470:three_prime_UTR 40.0%
GCAAACATGTTGGATGAAAG+AGG - chr7_1:75307391-75307410 Msa1038470:three_prime_UTR 40.0%
!! AGGAGTACTACTAGTCTTCT+TGG - chr7_1:75307439-75307458 Msa1038470:three_prime_UTR 40.0%
! AATTAAGGGTATGTGGTGGA+AGG + chr7_1:75307500-75307519 None:intergenic 40.0%
! AAGGAATTAAGGGTATGTGG+TGG + chr7_1:75307504-75307523 None:intergenic 40.0%
!! ATAGTATTGATGGGTGGAAG+AGG + chr7_1:75307588-75307607 None:intergenic 40.0%
!! GCAATGATAGTATTGATGGG+TGG + chr7_1:75307594-75307613 None:intergenic 40.0%
!! GGGGCAATGATAGTATTGAT+GGG + chr7_1:75307597-75307616 None:intergenic 40.0%
! TGGGGCAATGATAGTATTGA+TGG + chr7_1:75307598-75307617 None:intergenic 40.0%
GAGTGCTCAAAATTGTAAGG+AGG - chr7_1:75307901-75307920 Msa1038470:CDS 40.0%
TGAAGATCACTAACAAACCG+GGG + chr7_1:75307989-75308008 None:intergenic 40.0%
CAAGATCTTTATCAAGGTGG+TGG - chr7_1:75308007-75308026 Msa1038470:CDS 40.0%
CGAATCATCTTCTTCGTGTT+GGG + chr7_1:75308080-75308099 None:intergenic 40.0%
TCGAATCATCTTCTTCGTGT+TGG + chr7_1:75308081-75308100 None:intergenic 40.0%
! AGACTGTGATGATGATGACA+TGG - chr7_1:75308114-75308133 Msa1038470:CDS 40.0%
! TGATGATGACATGGTGATGA+TGG - chr7_1:75308123-75308142 Msa1038470:CDS 40.0%
! GAAGAGTTTTTGTGAGACAG+TGG - chr7_1:75308198-75308217 Msa1038470:CDS 40.0%
!! TCAAGAAAAGCTTGCTAGAG+AGG - chr7_1:75308288-75308307 Msa1038470:CDS 40.0%
!! ATTCTGTGTCACTTGAGCTA+GGG + chr7_1:75308534-75308553 None:intergenic 40.0%
!! TATTCTGTGTCACTTGAGCT+AGG + chr7_1:75308535-75308554 None:intergenic 40.0%
CCATTATTGTAGGCACAACA+AGG + chr7_1:75308576-75308595 None:intergenic 40.0%
! CCTTGTTGTGCCTACAATAA+TGG - chr7_1:75308573-75308592 Msa1038470:CDS 40.0%
! CTCTGAAGGAATGTTTGAGT+TGG - chr7_1:75308735-75308754 Msa1038470:intron 40.0%
! GATACAAGAGAAGTGCAAAG+AGG - chr7_1:75308758-75308777 Msa1038470:CDS 40.0%
TGAATTGGAGGTTGGATGTT+TGG + chr7_1:75308956-75308975 None:intergenic 40.0%
CATCCAACCTCCAATTCAAA+TGG - chr7_1:75308958-75308977 Msa1038470:CDS 40.0%
TGACCATTTGAATTGGAGGT+TGG + chr7_1:75308964-75308983 None:intergenic 40.0%
TCAGTCTTCTGATTCTCCAA+TGG - chr7_1:75309008-75309027 Msa1038470:CDS 40.0%
CAGTCTTCTGATTCTCCAAT+GGG - chr7_1:75309009-75309028 Msa1038470:CDS 40.0%
AGTCTTCTGATTCTCCAATG+GGG - chr7_1:75309010-75309029 Msa1038470:CDS 40.0%
CATGCAATCAGTGAATTAGC+TGG - chr7_1:75309069-75309088 Msa1038470:CDS 40.0%
!! TTGTTTTGCTTGGTGACTGA+TGG - chr7_1:75309230-75309249 Msa1038470:five_prime_UTR 40.0%
!! TGTTTTGCTTGGTGACTGAT+GGG - chr7_1:75309231-75309250 Msa1038470:five_prime_UTR 40.0%
CACGGACAGAATGATAGTTA+AGG + chr7_1:75309390-75309409 None:intergenic 40.0%
!! CTAAAAGAGGAGAGTGTTGT+GGG - chr7_1:75307261-75307280 Msa1038470:three_prime_UTR 40.0%
GCTGAGTTTGAAAAAAGAGG+TGG - chr7_1:75307366-75307385 Msa1038470:three_prime_UTR 40.0%
GCAAACATGTTGGATGAAAG+AGG - chr7_1:75307391-75307410 Msa1038470:three_prime_UTR 40.0%
!! AGGAGTACTACTAGTCTTCT+TGG - chr7_1:75307439-75307458 Msa1038470:three_prime_UTR 40.0%
! AATTAAGGGTATGTGGTGGA+AGG + chr7_1:75307500-75307519 None:intergenic 40.0%
! AAGGAATTAAGGGTATGTGG+TGG + chr7_1:75307504-75307523 None:intergenic 40.0%
!! ATAGTATTGATGGGTGGAAG+AGG + chr7_1:75307588-75307607 None:intergenic 40.0%
!! GCAATGATAGTATTGATGGG+TGG + chr7_1:75307594-75307613 None:intergenic 40.0%
!! GGGGCAATGATAGTATTGAT+GGG + chr7_1:75307597-75307616 None:intergenic 40.0%
! TGGGGCAATGATAGTATTGA+TGG + chr7_1:75307598-75307617 None:intergenic 40.0%
GAGTGCTCAAAATTGTAAGG+AGG - chr7_1:75307901-75307920 Msa1038470:CDS 40.0%
TGAAGATCACTAACAAACCG+GGG + chr7_1:75307989-75308008 None:intergenic 40.0%
CAAGATCTTTATCAAGGTGG+TGG - chr7_1:75308007-75308026 Msa1038470:CDS 40.0%
CGAATCATCTTCTTCGTGTT+GGG + chr7_1:75308080-75308099 None:intergenic 40.0%
TCGAATCATCTTCTTCGTGT+TGG + chr7_1:75308081-75308100 None:intergenic 40.0%
! AGACTGTGATGATGATGACA+TGG - chr7_1:75308114-75308133 Msa1038470:CDS 40.0%
! TGATGATGACATGGTGATGA+TGG - chr7_1:75308123-75308142 Msa1038470:CDS 40.0%
! GAAGAGTTTTTGTGAGACAG+TGG - chr7_1:75308198-75308217 Msa1038470:CDS 40.0%
!! TCAAGAAAAGCTTGCTAGAG+AGG - chr7_1:75308288-75308307 Msa1038470:CDS 40.0%
!! ATTCTGTGTCACTTGAGCTA+GGG + chr7_1:75308534-75308553 None:intergenic 40.0%
!! TATTCTGTGTCACTTGAGCT+AGG + chr7_1:75308535-75308554 None:intergenic 40.0%
CCATTATTGTAGGCACAACA+AGG + chr7_1:75308576-75308595 None:intergenic 40.0%
! CCTTGTTGTGCCTACAATAA+TGG - chr7_1:75308573-75308592 Msa1038470:CDS 40.0%
! CTCTGAAGGAATGTTTGAGT+TGG - chr7_1:75308735-75308754 Msa1038470:intron 40.0%
! GATACAAGAGAAGTGCAAAG+AGG - chr7_1:75308758-75308777 Msa1038470:CDS 40.0%
TGAATTGGAGGTTGGATGTT+TGG + chr7_1:75308956-75308975 None:intergenic 40.0%
CATCCAACCTCCAATTCAAA+TGG - chr7_1:75308958-75308977 Msa1038470:CDS 40.0%
TGACCATTTGAATTGGAGGT+TGG + chr7_1:75308964-75308983 None:intergenic 40.0%
TCAGTCTTCTGATTCTCCAA+TGG - chr7_1:75309008-75309027 Msa1038470:CDS 40.0%
CAGTCTTCTGATTCTCCAAT+GGG - chr7_1:75309009-75309028 Msa1038470:CDS 40.0%
AGTCTTCTGATTCTCCAATG+GGG - chr7_1:75309010-75309029 Msa1038470:CDS 40.0%
CATGCAATCAGTGAATTAGC+TGG - chr7_1:75309069-75309088 Msa1038470:CDS 40.0%
!! TTGTTTTGCTTGGTGACTGA+TGG - chr7_1:75309230-75309249 Msa1038470:five_prime_UTR 40.0%
!! TGTTTTGCTTGGTGACTGAT+GGG - chr7_1:75309231-75309250 Msa1038470:five_prime_UTR 40.0%
CACGGACAGAATGATAGTTA+AGG + chr7_1:75309390-75309409 None:intergenic 40.0%
!! GCTAAAAGAGGAGAGTGTTG+TGG - chr7_1:75307260-75307279 Msa1038470:three_prime_UTR 45.0%
GACAAACGAGAGAGAAAGAG+AGG - chr7_1:75307295-75307314 Msa1038470:three_prime_UTR 45.0%
TGCATGTAGAGTAGTAGAGC+TGG - chr7_1:75307331-75307350 Msa1038470:three_prime_UTR 45.0%
AGAGGTGGTAGCAAACATGT+TGG - chr7_1:75307381-75307400 Msa1038470:three_prime_UTR 45.0%
CAGCTGGAATCGATGATCAA+CGG + chr7_1:75307685-75307704 None:intergenic 45.0%
TCCCAGATCAACTCATCACA+TGG - chr7_1:75307761-75307780 Msa1038470:CDS 45.0%
!! CCCATGTGATGAGTTGATCT+GGG + chr7_1:75307765-75307784 None:intergenic 45.0%
CCCAGATCAACTCATCACAT+GGG - chr7_1:75307762-75307781 Msa1038470:CDS 45.0%
!! TCCCATGTGATGAGTTGATC+TGG + chr7_1:75307766-75307785 None:intergenic 45.0%
GAAGATCACTAACAAACCGG+GGG + chr7_1:75307988-75308007 None:intergenic 45.0%
AGTGCCAACACTTCATCTCT+TGG + chr7_1:75308625-75308644 None:intergenic 45.0%
TCAGAGATTCTCTCCCACAA+AGG + chr7_1:75308721-75308740 None:intergenic 45.0%
TTGTGGGAGAGAATCTCTGA+AGG - chr7_1:75308721-75308740 Msa1038470:intron 45.0%
GAATCAGAAGACTGAGCTTG+AGG + chr7_1:75309003-75309022 None:intergenic 45.0%
!! GCTAAAAGAGGAGAGTGTTG+TGG - chr7_1:75307260-75307279 Msa1038470:three_prime_UTR 45.0%
GACAAACGAGAGAGAAAGAG+AGG - chr7_1:75307295-75307314 Msa1038470:three_prime_UTR 45.0%
TGCATGTAGAGTAGTAGAGC+TGG - chr7_1:75307331-75307350 Msa1038470:three_prime_UTR 45.0%
AGAGGTGGTAGCAAACATGT+TGG - chr7_1:75307381-75307400 Msa1038470:three_prime_UTR 45.0%
CAGCTGGAATCGATGATCAA+CGG + chr7_1:75307685-75307704 None:intergenic 45.0%
TCCCAGATCAACTCATCACA+TGG - chr7_1:75307761-75307780 Msa1038470:CDS 45.0%
!! CCCATGTGATGAGTTGATCT+GGG + chr7_1:75307765-75307784 None:intergenic 45.0%
CCCAGATCAACTCATCACAT+GGG - chr7_1:75307762-75307781 Msa1038470:CDS 45.0%
!! TCCCATGTGATGAGTTGATC+TGG + chr7_1:75307766-75307785 None:intergenic 45.0%
GAAGATCACTAACAAACCGG+GGG + chr7_1:75307988-75308007 None:intergenic 45.0%
AGTGCCAACACTTCATCTCT+TGG + chr7_1:75308625-75308644 None:intergenic 45.0%
TCAGAGATTCTCTCCCACAA+AGG + chr7_1:75308721-75308740 None:intergenic 45.0%
TTGTGGGAGAGAATCTCTGA+AGG - chr7_1:75308721-75308740 Msa1038470:intron 45.0%
GAATCAGAAGACTGAGCTTG+AGG + chr7_1:75309003-75309022 None:intergenic 45.0%
! AGTGGTGTTAGGAGAGTGGT+GGG + chr7_1:75307617-75307636 None:intergenic 50.0%
! TAGTGGTGTTAGGAGAGTGG+TGG + chr7_1:75307618-75307637 None:intergenic 50.0%
! AGGTAGTGGTGTTAGGAGAG+TGG + chr7_1:75307621-75307640 None:intergenic 50.0%
!! TGATCAACGGTGGTGGAGTT+TGG + chr7_1:75307672-75307691 None:intergenic 50.0%
GAATCGATGATCAACGGTGG+TGG + chr7_1:75307679-75307698 None:intergenic 50.0%
CTGGAATCGATGATCAACGG+TGG + chr7_1:75307682-75307701 None:intergenic 50.0%
!! CGTTGATCATCGATTCCAGC+TGG - chr7_1:75307683-75307702 Msa1038470:CDS 50.0%
AAGTTCGTCGTTAGTCCAGC+TGG + chr7_1:75307701-75307720 None:intergenic 50.0%
TCACATGGGACCATGTCTCA+AGG - chr7_1:75307776-75307795 Msa1038470:CDS 50.0%
TGCAGTAAGCTAGCTGAGCT+TGG - chr7_1:75307869-75307888 Msa1038470:CDS 50.0%
GCAGTAAGCTAGCTGAGCTT+GGG - chr7_1:75307870-75307889 Msa1038470:CDS 50.0%
!! AGCTTGCTAGAGAGGAAGCA+TGG - chr7_1:75308296-75308315 Msa1038470:CDS 50.0%
AGGCACAACAAGGGTAGAAG+TGG + chr7_1:75308566-75308585 None:intergenic 50.0%
GTGGCCAAGAGATGAAGTGT+TGG - chr7_1:75308618-75308637 Msa1038470:CDS 50.0%
TCAGAAGACTGAGCTTGAGG+TGG + chr7_1:75309000-75309019 None:intergenic 50.0%
! TTTGCTTGGTGACTGATGGG+AGG - chr7_1:75309234-75309253 Msa1038470:five_prime_UTR 50.0%
! TTGGTGACTGATGGGAGGAT+GGG - chr7_1:75309239-75309258 Msa1038470:five_prime_UTR 50.0%
! AGTGGTGTTAGGAGAGTGGT+GGG + chr7_1:75307617-75307636 None:intergenic 50.0%
! TAGTGGTGTTAGGAGAGTGG+TGG + chr7_1:75307618-75307637 None:intergenic 50.0%
! AGGTAGTGGTGTTAGGAGAG+TGG + chr7_1:75307621-75307640 None:intergenic 50.0%
!! TGATCAACGGTGGTGGAGTT+TGG + chr7_1:75307672-75307691 None:intergenic 50.0%
GAATCGATGATCAACGGTGG+TGG + chr7_1:75307679-75307698 None:intergenic 50.0%
CTGGAATCGATGATCAACGG+TGG + chr7_1:75307682-75307701 None:intergenic 50.0%
!! CGTTGATCATCGATTCCAGC+TGG - chr7_1:75307683-75307702 Msa1038470:CDS 50.0%
AAGTTCGTCGTTAGTCCAGC+TGG + chr7_1:75307701-75307720 None:intergenic 50.0%
TCACATGGGACCATGTCTCA+AGG - chr7_1:75307776-75307795 Msa1038470:CDS 50.0%
TGCAGTAAGCTAGCTGAGCT+TGG - chr7_1:75307869-75307888 Msa1038470:CDS 50.0%
GCAGTAAGCTAGCTGAGCTT+GGG - chr7_1:75307870-75307889 Msa1038470:CDS 50.0%
!! AGCTTGCTAGAGAGGAAGCA+TGG - chr7_1:75308296-75308315 Msa1038470:CDS 50.0%
AGGCACAACAAGGGTAGAAG+TGG + chr7_1:75308566-75308585 None:intergenic 50.0%
GTGGCCAAGAGATGAAGTGT+TGG - chr7_1:75308618-75308637 Msa1038470:CDS 50.0%
TCAGAAGACTGAGCTTGAGG+TGG + chr7_1:75309000-75309019 None:intergenic 50.0%
! TTTGCTTGGTGACTGATGGG+AGG - chr7_1:75309234-75309253 Msa1038470:five_prime_UTR 50.0%
! TTGGTGACTGATGGGAGGAT+GGG - chr7_1:75309239-75309258 Msa1038470:five_prime_UTR 50.0%
! GTGGTGTTAGGAGAGTGGTG+GGG + chr7_1:75307616-75307635 None:intergenic 55.0%
!! ACGGTGGTGGAGTTTGGATC+TGG + chr7_1:75307666-75307685 None:intergenic 55.0%
TAATCAGCAGCAGCAGCAGC+AGG - chr7_1:75308906-75308925 Msa1038470:CDS 55.0%
AATCAGCAGCAGCAGCAGCA+GGG - chr7_1:75308907-75308926 Msa1038470:CDS 55.0%
! CTTGGTGACTGATGGGAGGA+TGG - chr7_1:75309238-75309257 Msa1038470:five_prime_UTR 55.0%
TGGTGACTGATGGGAGGATG+GGG - chr7_1:75309240-75309259 Msa1038470:five_prime_UTR 55.0%
! GTGGTGTTAGGAGAGTGGTG+GGG + chr7_1:75307616-75307635 None:intergenic 55.0%
!! ACGGTGGTGGAGTTTGGATC+TGG + chr7_1:75307666-75307685 None:intergenic 55.0%
TAATCAGCAGCAGCAGCAGC+AGG - chr7_1:75308906-75308925 Msa1038470:CDS 55.0%
AATCAGCAGCAGCAGCAGCA+GGG - chr7_1:75308907-75308926 Msa1038470:CDS 55.0%
! CTTGGTGACTGATGGGAGGA+TGG - chr7_1:75309238-75309257 Msa1038470:five_prime_UTR 55.0%
TGGTGACTGATGGGAGGATG+GGG - chr7_1:75309240-75309259 Msa1038470:five_prime_UTR 55.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 75307137 75309417 75307137 ID=Msa1038470;Name=Msa1038470
chr7_1 mRNA 75307137 75309417 75307137 ID=Msa1038470-mRNA-1;Parent=Msa1038470;Name=Msa1038470-mRNA-1;_AED=0.01;_eAED=0.01;_QI=260|1|1|1|1|1|2|382|520
chr7_1 exon 75307137 75308680 75307137 ID=Msa1038470-mRNA-1:exon:19215;Parent=Msa1038470-mRNA-1
chr7_1 exon 75308757 75309417 75308757 ID=Msa1038470-mRNA-1:exon:19214;Parent=Msa1038470-mRNA-1
chr7_1 five_prime_UTR 75309158 75309417 75309158 ID=Msa1038470-mRNA-1:five_prime_utr;Parent=Msa1038470-mRNA-1
chr7_1 CDS 75308757 75309157 75308757 ID=Msa1038470-mRNA-1:cds;Parent=Msa1038470-mRNA-1
chr7_1 CDS 75307519 75308680 75307519 ID=Msa1038470-mRNA-1:cds;Parent=Msa1038470-mRNA-1
chr7_1 three_prime_UTR 75307137 75307518 75307137 ID=Msa1038470-mRNA-1:three_prime_utr;Parent=Msa1038470-mRNA-1
Gene Sequence

>Msa1038470

ATGTTGGATGAAAGAGGAGAGCATTTTGAATTTGAGCAATTGAGGAGTACTACTAGTCTTCTTGGTTCGTCTTCTTCTTCTGTTGCAAACATCAACAGCACCTTCCACCACATACCCTTAATTCCTTGTACTTCTACTTCCAATTCTCATTCTCCTCATCATCAATTTCCACTTCAAACTCAAACAAACCTCTTCCACCCATCAATACTATCATTGCCCCACCACTCTCCTAACACCACTACCTTTAATTCTAATTCAATCAACTTCCAGATCCAAACTCCACCACCGTTGATCATCGATTCCAGCTGGACTAACGACGAACTTCTTCTACTCTTCAAGATCACATCTACCATTCACAATTTCTTCCCAGATCAACTCATCACATGGGACCATGTCTCAAGTAAGCTAGCTGAGCTTGGGATCAAGAAGAGTGCTCAAAATTGTAAGGAGGAGTTTGAACATGAGAACACATCATTTTTGAAGATTCATAACAATCATAATGATAATAATTTCCCCCGGTTTGTTAGTGATCTTCAAGATCTTTATCAAGGTGGTGGTGTTAGTGTTGATAATAAACAACCAAACCCTGACGAAAACAAAAATACCCAACACGAAGAAGATGATTCGAGAGATGATAGAGTAGACTGTGATGATGATGACATGGTGATGATGGAGAAATCAAAGAACAAAAAGAGGAAGAGGCGCCGTGATAGATTTGAAATGTTGAAGAGTTTTTGTGAGACAGTGGTTAACAAAATAATAGCACAACAAGAAGAAATACACAATAAGCTACTTGAAGACATGCTCAAAAGAGATCAAGAAAAGCTTGCTAGAGAGGAAGCATGGAAAAAACAAGAGATTGAAAGGATGAACATGATGGTACAACAACAACAAGCTATTGCAAGTGACAGACAAGCCAACATCATTGAATTCTTGAACAAATATCTAGCCACAGGATATTCTTCTTCTTCTTCACAATTGCACTCACAAAACCCTAATAATGCTTCTAATAATCTTGAATCAAAAACACCTTTTTCTAATGTGATAGCAGATCAAAACCCTAGCTCAAGTGACACAGAATACTCAAATTCCACTTCTACCCTTGTTGTGCCTACAATAATGGAGAAATTAGAGGATAAGAGAAGGTGGCCAAGAGATGAAGTGTTGGCACTCATAAACCTCAAGTCTACTACAAGTGTTACAAACAGAAGCAACAATAATGTTGAAGGAAATAGTAATAAGGGACCTTTGTGGGAGAGAATCTCTGAAGGAATGTTTGAGTTGGGATACAAGAGAAGTGCAAAGAGGTGTAAAGAAAAATGGGAAAACATAAACAAGTATTTTAAAAAGACAAAGGATATTGTTGTGAATAAGAAGAAAAGGTCAATGGATTCTAGGACTTGTCCTTATTTTCAACAACTCAGTTCTTTGTATAATCAGCAGCAGCAGCAGCAGGGAAAAATAATTGATCCTCAATTAACCAAACATCCAACCTCCAATTCAAATGGTCATATTGTAGATGATCCACCTCAAGCTCAGTCTTCTGATTCTCCAATGGGGTAG
Protein sequence

>Msa1038470

MLDERGEHFEFEQLRSTTSLLGSSSSSVANINSTFHHIPLIPCTSTSNSHSPHHQFPLQTQTNLFHPSILSLPHHSPNTTTFNSNSINFQIQTPPPLIIDSSWTNDELLLLFKITSTIHNFFPDQLITWDHVSSKLAELGIKKSAQNCKEEFEHENTSFLKIHNNHNDNNFPRFVSDLQDLYQGGGVSVDNKQPNPDENKNTQHEEDDSRDDRVDCDDDDMVMMEKSKNKKRKRRRDRFEMLKSFCETVVNKIIAQQEEIHNKLLEDMLKRDQEKLAREEAWKKQEIERMNMMVQQQQAIASDRQANIIEFLNKYLATGYSSSSSQLHSQNPNNASNNLESKTPFSNVIADQNPSSSDTEYSNSTSTLVVPTIMEKLEDKRRWPRDEVLALINLKSTTSVTNRSNNNVEGNSNKGPLWERISEGMFELGYKRSAKRCKEKWENINKYFKKTKDIVVNKKKRSMDSRTCPYFQQLSSLYNQQQQQQGKIIDPQLTKHPTSNSNGHIVDDPPQAQSSDSPMG*