Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039910 | XP_013450454.1 | 100.000 | 202 | 0 | 0 | 1 | 202 | 1 | 202 | 2.60e-145 | 412 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039910 | sp|Q9CPW7|ZMAT2_MOUSE | 49.749 | 199 | 91 | 5 | 8 | 201 | 3 | 197 | 5.91e-52 | 168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039910 | A0A072U456 | 100.000 | 202 | 0 | 0 | 1 | 202 | 1 | 202 | 1.24e-145 | 412 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1039910 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039910 | MtrunA17_Chr7g0271741 | 100.000 | 202 | 0 | 0 | 1 | 202 | 1 | 202 | 2.40e-149 | 412 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039910 | AT3G05760.1 | 72.000 | 200 | 54 | 1 | 4 | 201 | 2 | 201 | 7.46e-95 | 275 |
| Msa1039910 | AT3G05760.2 | 79.021 | 143 | 30 | 0 | 5 | 147 | 3 | 145 | 6.70e-83 | 243 |
Find 75 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTATTTGGATCATATTAA+TGG | 0.205658 | 7_1:-77244605 | Msa1039910:CDS |
| GAAGGACTCCGCGAACTATT+TGG | 0.256397 | 7_1:-77244618 | Msa1039910:CDS |
| TCCTGACGTTGCTGCCTTGA+TGG | 0.273991 | 7_1:-77243049 | Msa1039910:CDS |
| GCAACGTCAGGATCCATTTC+AGG | 0.287879 | 7_1:+77243060 | None:intergenic |
| ACTATCTTTCATTTGATCAT+AGG | 0.293124 | 7_1:+77242882 | None:intergenic |
| TGAGACAGAAAATTTGAATT+GGG | 0.295777 | 7_1:+77246292 | None:intergenic |
| GTTTGGTTCCGGGTGGCTTT+AGG | 0.299311 | 7_1:-77242910 | Msa1039910:three_prime_UTR |
| TAAGCGATTCTAGAGAAAAT+TGG | 0.299955 | 7_1:+77246245 | None:intergenic |
| GGTAGCTAACAGTTTGGTTC+CGG | 0.318971 | 7_1:-77242921 | Msa1039910:three_prime_UTR |
| TTGAGACAGAAAATTTGAAT+TGG | 0.321223 | 7_1:+77246291 | None:intergenic |
| GTTATATTTATTCATAAGAT+TGG | 0.342621 | 7_1:-77242823 | Msa1039910:three_prime_UTR |
| GTAGCTAACAGTTTGGTTCC+GGG | 0.352019 | 7_1:-77242920 | Msa1039910:three_prime_UTR |
| GTTGCTGCCTTGATGGGGTT+TGG | 0.376323 | 7_1:-77243042 | Msa1039910:CDS |
| CCTGACGTTGCTGCCTTGAT+GGG | 0.380236 | 7_1:-77243048 | Msa1039910:CDS |
| ATTAAATCGAATATTCATAA+TGG | 0.385619 | 7_1:+77242683 | None:intergenic |
| CTGCAATGTTGAGCAGAATC+TGG | 0.389037 | 7_1:-77242942 | Msa1039910:three_prime_UTR |
| AGAAAGAAAGCGACTGCGTC+GGG | 0.394814 | 7_1:-77243359 | Msa1039910:CDS |
| TCATAATCTCTATGTTTCAA+TGG | 0.398737 | 7_1:+77245819 | None:intergenic |
| AATTGAACTTACACTGTTGC+TGG | 0.398841 | 7_1:+77246183 | None:intergenic |
| CTTGCTCTGTAAAGCTTCCT+AGG | 0.401772 | 7_1:+77243755 | None:intergenic |
| ATAGTTTGCAAGCTGGTTCA+TGG | 0.410269 | 7_1:-77242847 | Msa1039910:three_prime_UTR |
| GTCACTCCCCACATAGATAA+TGG | 0.418680 | 7_1:+77242729 | None:intergenic |
| ATGATCAAATGAAAGATAGT+TGG | 0.422027 | 7_1:-77242879 | Msa1039910:three_prime_UTR |
| TCAAGTACCTGTTGGCTTAG+TGG | 0.422359 | 7_1:+77245378 | None:intergenic |
| AGCAGTAGAAGAACCTGAAA+TGG | 0.433262 | 7_1:-77243073 | Msa1039910:CDS |
| TCCACAGATCAGAGAGCGTT+GGG | 0.434413 | 7_1:-77244482 | Msa1039910:intron |
| ATTCGGTTGAATTAGGCCGC+TGG | 0.437263 | 7_1:-77246087 | Msa1039910:intron |
| CCCATCAAGGCAGCAACGTC+AGG | 0.440366 | 7_1:+77243048 | None:intergenic |
| ACAGAAAATTTGAATTGGGG+GGG | 0.444472 | 7_1:+77246296 | None:intergenic |
| TGCTCGTGAGCGTGAGAGAC+AGG | 0.449139 | 7_1:-77246013 | Msa1039910:CDS |
| TGAACGTTCTTCTCTCAAAC+AGG | 0.469716 | 7_1:-77244444 | Msa1039910:intron |
| TGTTGGCTTAGTGGTGCAAC+AGG | 0.472073 | 7_1:+77245387 | None:intergenic |
| TGATCAAATGAAAGATAGTT+GGG | 0.473148 | 7_1:-77242878 | Msa1039910:three_prime_UTR |
| GAATCTGGTAGCTAACAGTT+TGG | 0.476202 | 7_1:-77242927 | Msa1039910:three_prime_UTR |
| GAAAATTGGAATTAGAATGA+TGG | 0.481784 | 7_1:+77246259 | None:intergenic |
| TTCGGTTGAATTAGGCCGCT+GGG | 0.484855 | 7_1:-77246086 | Msa1039910:intron |
| TTCAATGGCTTCCTCTGCAC+CGG | 0.489779 | 7_1:+77245834 | None:intergenic |
| GAGACAGAAAATTTGAATTG+GGG | 0.499465 | 7_1:+77246293 | None:intergenic |
| AAAATTGGAATTAGAATGAT+GGG | 0.501054 | 7_1:+77246260 | None:intergenic |
| ATTATCTACCATTATCTATG+TGG | 0.510016 | 7_1:-77242737 | Msa1039910:three_prime_UTR |
| TGTTGCACCACTAAGCCAAC+AGG | 0.512030 | 7_1:-77245385 | Msa1039910:intron |
| TTATCTACCATTATCTATGT+GGG | 0.519180 | 7_1:-77242736 | Msa1039910:three_prime_UTR |
| GAAGAGAAAGCAAAACCTAA+AGG | 0.524374 | 7_1:-77245988 | Msa1039910:intron |
| AAGAAAGAAAGCGACTGCGT+CGG | 0.529732 | 7_1:-77243360 | Msa1039910:CDS |
| GGTTTGAAAATCTGAAGAAA+CGG | 0.530251 | 7_1:-77243783 | Msa1039910:CDS |
| ATATATAGGTAGAGGTCCTC+CGG | 0.536652 | 7_1:-77245853 | Msa1039910:intron |
| TTCCACAGATCAGAGAGCGT+TGG | 0.536771 | 7_1:-77244483 | Msa1039910:intron |
| GTAGACCTTGAATCCCGCTT+GGG | 0.547442 | 7_1:-77245795 | Msa1039910:CDS |
| GCTGCCTTGATGGGGTTTGG+AGG | 0.549348 | 7_1:-77243039 | Msa1039910:CDS |
| AGTAGACCTTGAATCCCGCT+TGG | 0.550337 | 7_1:-77245796 | Msa1039910:CDS |
| GTAGAGGTCCTCCGGTGCAG+AGG | 0.551585 | 7_1:-77245845 | Msa1039910:CDS |
| AGTTTGTGAGTGCGTGGTGA+AGG | 0.552418 | 7_1:-77244636 | Msa1039910:CDS |
| CTAGGAAGCTTTACAGAGCA+AGG | 0.559657 | 7_1:-77243754 | Msa1039910:intron |
| AATGGCTTCCTCTGCACCGG+AGG | 0.560400 | 7_1:+77245837 | None:intergenic |
| CTGACGTTGCTGCCTTGATG+GGG | 0.560761 | 7_1:-77243047 | Msa1039910:CDS |
| CTGAAGAAACGGAAAGACCT+AGG | 0.564143 | 7_1:-77243772 | Msa1039910:CDS |
| AGTCGGCTAAATGCTTTGCA+AGG | 0.566368 | 7_1:-77242655 | Msa1039910:three_prime_UTR |
| ATTAAAACAGCAACAAGAAG+AGG | 0.569720 | 7_1:-77243383 | Msa1039910:CDS |
| AATATGATCCAAATAGTTCG+CGG | 0.573368 | 7_1:+77244610 | None:intergenic |
| AGTGACATTCTTCTACATGT+AGG | 0.577705 | 7_1:-77242996 | Msa1039910:exon |
| AAAACCTCCAAACCCCATCA+AGG | 0.581455 | 7_1:+77243035 | None:intergenic |
| TCAAACAATAGTTTGCAAGC+TGG | 0.586939 | 7_1:-77242854 | Msa1039910:three_prime_UTR |
| GTCGGCTAAATGCTTTGCAA+GGG | 0.591122 | 7_1:-77242654 | Msa1039910:three_prime_UTR |
| GACAGAAAATTTGAATTGGG+GGG | 0.607513 | 7_1:+77246295 | None:intergenic |
| AGACAGAAAATTTGAATTGG+GGG | 0.616548 | 7_1:+77246294 | None:intergenic |
| TAATGGATATCTCTGAGCCA+TGG | 0.626704 | 7_1:+77242700 | None:intergenic |
| CTGCTCAGTTTGTGAGTGCG+TGG | 0.632386 | 7_1:-77244642 | Msa1039910:CDS |
| GATGAACGCAGGTTCAGGAA+CGG | 0.633829 | 7_1:-77243804 | Msa1039910:intron |
| AGGTTCATCCTAAAGCCACC+CGG | 0.644152 | 7_1:+77242902 | None:intergenic |
| TCGGTTGAATTAGGCCGCTG+GGG | 0.650254 | 7_1:-77246085 | Msa1039910:intron |
| TGAACTTACACTGTTGCTGG+TGG | 0.666094 | 7_1:+77246186 | None:intergenic |
| TATCTACCATTATCTATGTG+GGG | 0.669135 | 7_1:-77242735 | Msa1039910:three_prime_UTR |
| GAATGTGTTGTCAACCCCAG+CGG | 0.671454 | 7_1:+77246071 | None:intergenic |
| GCTAACAGTTTGGTTCCGGG+TGG | 0.693222 | 7_1:-77242917 | Msa1039910:three_prime_UTR |
| TGGGGAGTGACAAATTGCCA+TGG | 0.709290 | 7_1:-77242717 | Msa1039910:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | - | chr7_1:77243051-77243070 | Msa1039910:CDS | 0.0% |
| !! | TTCAAATTAATAATTTGATT+CGG | - | chr7_1:77242838-77242857 | Msa1039910:three_prime_UTR | 10.0% |
| !! | AATTTACCTAATAATAATTA+GGG | + | chr7_1:77244816-77244835 | None:intergenic | 10.0% |
| !! | ATATATATATATATAGGTAG+AGG | - | chr7_1:77243081-77243100 | Msa1039910:CDS | 15.0% |
| !!! | TAAATTTTAGAAATGATCTT+AGG | - | chr7_1:77244104-77244123 | Msa1039910:intron | 15.0% |
| !!! | AAATTTTAGAAATGATCTTA+GGG | - | chr7_1:77244105-77244124 | Msa1039910:intron | 15.0% |
| !! | ATATACATTATTAAATCCAA+AGG | + | chr7_1:77244264-77244283 | None:intergenic | 15.0% |
| !!! | TGTTTATTTATTTCATTTTC+TGG | + | chr7_1:77244540-77244559 | None:intergenic | 15.0% |
| !!! | ATTTTGATATTTACAGATTT+GGG | - | chr7_1:77244570-77244589 | Msa1039910:intron | 15.0% |
| !! | ATTTACCTAATAATAATTAG+GGG | + | chr7_1:77244815-77244834 | None:intergenic | 15.0% |
| !! | CAATTTACCTAATAATAATT+AGG | + | chr7_1:77244817-77244836 | None:intergenic | 15.0% |
| !!! | TTGATCTATAACTAAAATTT+TGG | - | chr7_1:77245334-77245353 | Msa1039910:intron | 15.0% |
| !! | GTTATATTTATTCATAAGAT+TGG | - | chr7_1:77246119-77246138 | Msa1039910:intron | 15.0% |
| !! | ATTAAATCGAATATTCATAA+TGG | + | chr7_1:77246262-77246281 | None:intergenic | 15.0% |
| !!! | ATTCGATTTAATTTTATAGT+CGG | - | chr7_1:77246270-77246289 | Msa1039910:five_prime_UTR | 15.0% |
| !! | AAAATTGGAATTAGAATGAT+GGG | + | chr7_1:77242685-77242704 | None:intergenic | 20.0% |
| !!! | ATTTTATGTTGTAGACTTTT+AGG | - | chr7_1:77243437-77243456 | Msa1039910:intron | 20.0% |
| !!! | TAACCTTTATTTCTTTTTGT+TGG | - | chr7_1:77243688-77243707 | Msa1039910:intron | 20.0% |
| !!! | AACCTTTATTTCTTTTTGTT+GGG | - | chr7_1:77243689-77243708 | Msa1039910:intron | 20.0% |
| !!! | TCTTTTTCCAAATTATATGT+GGG | - | chr7_1:77243893-77243912 | Msa1039910:intron | 20.0% |
| !! | ATCAAAAAGATTATCCATAT+AGG | + | chr7_1:77244224-77244243 | None:intergenic | 20.0% |
| !! | GATTTAATAATGTATATTGC+AGG | - | chr7_1:77244267-77244286 | Msa1039910:intron | 20.0% |
| !! | AACTATTTGGATCATATTAA+TGG | - | chr7_1:77244337-77244356 | Msa1039910:intron | 20.0% |
| !! | CAAATCTGTAAATATCAAAA+TGG | + | chr7_1:77244571-77244590 | None:intergenic | 20.0% |
| !!! | CATTTTGATATTTACAGATT+TGG | - | chr7_1:77244569-77244588 | Msa1039910:intron | 20.0% |
| !! | TTCAATTAGAATACAAATCT+TGG | - | chr7_1:77245656-77245675 | Msa1039910:intron | 20.0% |
| ! | TGAGACAGAAAATTTGAATT+GGG | + | chr7_1:77242653-77242672 | None:intergenic | 25.0% |
| ! | TTGAGACAGAAAATTTGAAT+TGG | + | chr7_1:77242654-77242673 | None:intergenic | 25.0% |
| ! | GAAAATTGGAATTAGAATGA+TGG | + | chr7_1:77242686-77242705 | None:intergenic | 25.0% |
| ! | AACCATCGACAATAAATATT+GGG | + | chr7_1:77242792-77242811 | None:intergenic | 25.0% |
| ! | AAACCATCGACAATAAATAT+TGG | + | chr7_1:77242793-77242812 | None:intergenic | 25.0% |
| !!! | TAATTTGATTCGGTTGAATT+AGG | - | chr7_1:77242848-77242867 | Msa1039910:three_prime_UTR | 25.0% |
| !! | TGTGAAATTAGTTTACCTTT+AGG | + | chr7_1:77242972-77242991 | None:intergenic | 25.0% |
| ! | TCATAATCTCTATGTTTCAA+TGG | + | chr7_1:77243126-77243145 | None:intergenic | 25.0% |
| !! | AAAAACTCAGGTATGTTTTA+AGG | - | chr7_1:77243170-77243189 | Msa1039910:intron | 25.0% |
| !!! | TTTGCTTTTTGATAAAACAC+TGG | - | chr7_1:77243316-77243335 | Msa1039910:intron | 25.0% |
| ! | AATAAAAATCAAGTACCTGT+TGG | + | chr7_1:77243575-77243594 | None:intergenic | 25.0% |
| !!! | GTATTTGTGTACTTTGAAAT+TGG | - | chr7_1:77243597-77243616 | Msa1039910:intron | 25.0% |
| !!! | ACCTTTATTTCTTTTTGTTG+GGG | - | chr7_1:77243690-77243709 | Msa1039910:intron | 25.0% |
| !! | AACTTTGCTGGTTAAAAATA+TGG | - | chr7_1:77243767-77243786 | Msa1039910:CDS | 25.0% |
| !! | ACTTTGCTGGTTAAAAATAT+GGG | - | chr7_1:77243768-77243787 | Msa1039910:CDS | 25.0% |
| !! | CTCTTTTTCCAAATTATATG+TGG | - | chr7_1:77243892-77243911 | Msa1039910:intron | 25.0% |
| ! | TATTGCAATGTCTAGAAAAA+GGG | + | chr7_1:77244029-77244048 | None:intergenic | 25.0% |
| ! | ATATTGCAATGTCTAGAAAA+AGG | + | chr7_1:77244030-77244049 | None:intergenic | 25.0% |
| ! | TCATAACTCTGTTATATATC+AGG | - | chr7_1:77244131-77244150 | Msa1039910:intron | 25.0% |
| ! | CATAACTCTGTTATATATCA+GGG | - | chr7_1:77244132-77244151 | Msa1039910:intron | 25.0% |
| !!! | GCATATTTTCTTTGATTTTG+CGG | - | chr7_1:77244384-77244403 | Msa1039910:intron | 25.0% |
| ! | ATTAGAATTCATAGACTAGA+AGG | + | chr7_1:77244980-77244999 | None:intergenic | 25.0% |
| ! | TTCTAGTCTATGAATTCTAA+TGG | - | chr7_1:77244979-77244998 | Msa1039910:intron | 25.0% |
| ! | ACTTTAATGTCCATTATTCT+TGG | - | chr7_1:77245264-77245283 | Msa1039910:intron | 25.0% |
| ! | AATAAAGCTTCTACAATTTC+AGG | + | chr7_1:77245290-77245309 | None:intergenic | 25.0% |
| !!! | TAGTATTTTTGACTACTTCT+AGG | - | chr7_1:77245398-77245417 | Msa1039910:CDS | 25.0% |
| ! | CATGTTGAAATTTCAAATGT+TGG | - | chr7_1:77245446-77245465 | Msa1039910:intron | 25.0% |
| ! | AAAATTCAATTTCCACACTA+AGG | + | chr7_1:77245511-77245530 | None:intergenic | 25.0% |
| !!! | TTTTTGCAGATTTTGATGAA+AGG | - | chr7_1:77245534-77245553 | Msa1039910:intron | 25.0% |
| ! | AAGAAACTGTAATCTGAATA+CGG | + | chr7_1:77245633-77245652 | None:intergenic | 25.0% |
| !!! | ATCACTTTTAGAAAGATAGA+TGG | + | chr7_1:77245766-77245785 | None:intergenic | 25.0% |
| !!! | TTAATTGCTACTTTGTGAAA+AGG | + | chr7_1:77245817-77245836 | None:intergenic | 25.0% |
| ! | ACTATCTTTCATTTGATCAT+AGG | + | chr7_1:77246063-77246082 | None:intergenic | 25.0% |
| ! | ATGATCAAATGAAAGATAGT+TGG | - | chr7_1:77246063-77246082 | Msa1039910:CDS | 25.0% |
| ! | TGATCAAATGAAAGATAGTT+GGG | - | chr7_1:77246064-77246083 | Msa1039910:CDS | 25.0% |
| ! | ATTATCTACCATTATCTATG+TGG | - | chr7_1:77246205-77246224 | Msa1039910:exon | 25.0% |
| ! | TTATCTACCATTATCTATGT+GGG | - | chr7_1:77246206-77246225 | Msa1039910:exon | 25.0% |
| AGACAGAAAATTTGAATTGG+GGG | + | chr7_1:77242651-77242670 | None:intergenic | 30.0% | |
| GAGACAGAAAATTTGAATTG+GGG | + | chr7_1:77242652-77242671 | None:intergenic | 30.0% | |
| ! | TAAGCGATTCTAGAGAAAAT+TGG | + | chr7_1:77242700-77242719 | None:intergenic | 30.0% |
| ATCCCAATATTTATTGTCGA+TGG | - | chr7_1:77242787-77242806 | Msa1039910:three_prime_UTR | 30.0% | |
| !!! | GTATGTTTGCTTTTTGAGTT+TGG | - | chr7_1:77243400-77243419 | Msa1039910:CDS | 30.0% |
| TTAACGGTATGAACAAATCT+TGG | + | chr7_1:77243489-77243508 | None:intergenic | 30.0% | |
| ! | GATATTGTGTCATATTTTGC+AGG | - | chr7_1:77243524-77243543 | Msa1039910:intron | 30.0% |
| TAAAGGTTATCAAGAGAGTA+AGG | + | chr7_1:77243677-77243696 | None:intergenic | 30.0% | |
| TCCCCAACAAAAAGAAATAA+AGG | + | chr7_1:77243694-77243713 | None:intergenic | 30.0% | |
| !! | TTTATTTCTTTTTGTTGGGG+AGG | - | chr7_1:77243693-77243712 | Msa1039910:intron | 30.0% |
| TTGGAAAAAGAGAACTTTCA+GGG | + | chr7_1:77243884-77243903 | None:intergenic | 30.0% | |
| TTTGGAAAAAGAGAACTTTC+AGG | + | chr7_1:77243885-77243904 | None:intergenic | 30.0% | |
| TTGTGATATTAATTGTCTCG+TGG | - | chr7_1:77243999-77244018 | Msa1039910:intron | 30.0% | |
| TAATAATGTATATTGCAGGC+TGG | - | chr7_1:77244271-77244290 | Msa1039910:intron | 30.0% | |
| AATATGATCCAAATAGTTCG+CGG | + | chr7_1:77244335-77244354 | None:intergenic | 30.0% | |
| ! | AGAAACGTATGTAGTCTTTT+TGG | - | chr7_1:77244362-77244381 | Msa1039910:intron | 30.0% |
| !! | ACCTGATATCACTTTTATAG+AGG | + | chr7_1:77244596-77244615 | None:intergenic | 30.0% |
| !!! | TCTTTTTATTTTCAGAACCC+AGG | + | chr7_1:77244619-77244638 | None:intergenic | 30.0% |
| ATAATAATTAGGGGAGAGAA+GGG | + | chr7_1:77244806-77244825 | None:intergenic | 30.0% | |
| AATAATAATTAGGGGAGAGA+AGG | + | chr7_1:77244807-77244826 | None:intergenic | 30.0% | |
| TCTCTCCCCTAATTATTATT+AGG | - | chr7_1:77244807-77244826 | Msa1039910:intron | 30.0% | |
| ATAGGTTTCTTCTCTAGTAT+GGG | - | chr7_1:77244923-77244942 | Msa1039910:intron | 30.0% | |
| TCAAGCAATGTCAAAGATAA+TGG | + | chr7_1:77245010-77245029 | None:intergenic | 30.0% | |
| AGAAACCAAATGACACATAA+TGG | + | chr7_1:77245073-77245092 | None:intergenic | 30.0% | |
| GGTTTGAAAATCTGAAGAAA+CGG | - | chr7_1:77245159-77245178 | Msa1039910:intron | 30.0% | |
| CAACTCTCTTCTATTATCTT+AGG | + | chr7_1:77245219-77245238 | None:intergenic | 30.0% | |
| CTAAGATAATAGAAGAGAGT+TGG | - | chr7_1:77245217-77245236 | Msa1039910:intron | 30.0% | |
| AATCTCCTTAATTGAAAGGT+CGG | + | chr7_1:77245316-77245335 | None:intergenic | 30.0% | |
| GATCAATCTCCTTAATTGAA+AGG | + | chr7_1:77245320-77245339 | None:intergenic | 30.0% | |
| ATTAAAACAGCAACAAGAAG+AGG | - | chr7_1:77245559-77245578 | Msa1039910:intron | 30.0% | |
| TCGGGAAAAGAAAAAAGAAA+AGG | - | chr7_1:77245601-77245620 | Msa1039910:intron | 30.0% | |
| ! | CAATTTTTGCATTCAGAAGA+AGG | - | chr7_1:77245845-77245864 | Msa1039910:CDS | 30.0% |
| !!! | AGAAGAATGTCACTTTTTGT+TGG | + | chr7_1:77245940-77245959 | None:intergenic | 30.0% |
| TATCTACCATTATCTATGTG+GGG | - | chr7_1:77246207-77246226 | Msa1039910:exon | 30.0% | |
| ACAGAAAATTTGAATTGGGG+GGG | + | chr7_1:77242649-77242668 | None:intergenic | 35.0% | |
| GACAGAAAATTTGAATTGGG+GGG | + | chr7_1:77242650-77242669 | None:intergenic | 35.0% | |
| AATTGAACTTACACTGTTGC+TGG | + | chr7_1:77242762-77242781 | None:intergenic | 35.0% | |
| GAAGAGAAAGCAAAACCTAA+AGG | - | chr7_1:77242954-77242973 | Msa1039910:three_prime_UTR | 35.0% | |
| TGTCTGGATTACTTTCTTTC+AGG | - | chr7_1:77243196-77243215 | Msa1039910:intron | 35.0% | |
| TTAAGCTGTGTATCCAAACA+GGG | - | chr7_1:77243250-77243269 | Msa1039910:intron | 35.0% | |
| ATAGATCCTTGCATTCACTT+AGG | + | chr7_1:77243276-77243295 | None:intergenic | 35.0% | |
| AAGTGAATGCAAGGATCTAT+AGG | - | chr7_1:77243276-77243295 | Msa1039910:intron | 35.0% | |
| !!! | TGTTGTAGACTTTTAGGTTG+TGG | - | chr7_1:77243443-77243462 | Msa1039910:intron | 35.0% |
| !!! | GTTGTAGACTTTTAGGTTGT+GGG | - | chr7_1:77243444-77243463 | Msa1039910:intron | 35.0% |
| !!! | TTGTAGACTTTTAGGTTGTG+GGG | - | chr7_1:77243445-77243464 | Msa1039910:intron | 35.0% |
| CTCTTATCAGTACAGCTTAA+CGG | + | chr7_1:77243505-77243524 | None:intergenic | 35.0% | |
| AACTGACTATCAAACTTTGC+TGG | - | chr7_1:77243755-77243774 | Msa1039910:CDS | 35.0% | |
| CACAGGAATTTGCAAAACTT+TGG | + | chr7_1:77243812-77243831 | None:intergenic | 35.0% | |
| ! | CAAAGTTTTGCAAATTCCTG+TGG | - | chr7_1:77243810-77243829 | Msa1039910:intron | 35.0% |
| GATTATCCATATAGGATCCT+TGG | + | chr7_1:77244216-77244235 | None:intergenic | 35.0% | |
| AATAACCATGAGCAAAGTGA+CGG | + | chr7_1:77244430-77244449 | None:intergenic | 35.0% | |
| TCAAACAGGTACAGTGATAT+AGG | - | chr7_1:77244512-77244531 | Msa1039910:intron | 35.0% | |
| GCCTCTATAAAAGTGATATC+AGG | - | chr7_1:77244592-77244611 | Msa1039910:intron | 35.0% | |
| ATAAAAGTGATATCAGGTCC+TGG | - | chr7_1:77244598-77244617 | Msa1039910:CDS | 35.0% | |
| TAAAAGTGATATCAGGTCCT+GGG | - | chr7_1:77244599-77244618 | Msa1039910:CDS | 35.0% | |
| TATATATGGGATGAGAAGAG+AGG | + | chr7_1:77244704-77244723 | None:intergenic | 35.0% | |
| CATAGGTTTCTTCTCTAGTA+TGG | - | chr7_1:77244922-77244941 | Msa1039910:intron | 35.0% | |
| ! | CAATGTCAAAGATAATGGCA+TGG | + | chr7_1:77245005-77245024 | None:intergenic | 35.0% |
| ! | GTGTTCCATTATGTGTCATT+TGG | - | chr7_1:77245065-77245084 | Msa1039910:intron | 35.0% |
| GATTTATAACTGTCATGCAG+AGG | + | chr7_1:77245113-77245132 | None:intergenic | 35.0% | |
| TAAATCTTTGTGATGAACGC+AGG | - | chr7_1:77245127-77245146 | Msa1039910:intron | 35.0% | |
| CAATTTCAGGCCAAGAATAA+TGG | + | chr7_1:77245277-77245296 | None:intergenic | 35.0% | |
| TTCAACCGACCTTTCAATTA+AGG | - | chr7_1:77245308-77245327 | Msa1039910:intron | 35.0% | |
| AGTGACATTCTTCTACATGT+AGG | - | chr7_1:77245946-77245965 | Msa1039910:intron | 35.0% | |
| ! | TCAAACAATAGTTTGCAAGC+TGG | - | chr7_1:77246088-77246107 | Msa1039910:intron | 35.0% |
| AGAAAATTTGAATTGGGGGG+GGG | + | chr7_1:77242647-77242666 | None:intergenic | 40.0% | |
| CAGAAAATTTGAATTGGGGG+GGG | + | chr7_1:77242648-77242667 | None:intergenic | 40.0% | |
| ATATATAGGTAGAGGTCCTC+CGG | - | chr7_1:77243089-77243108 | Msa1039910:intron | 40.0% | |
| ! | ATACCTGAGTTTTTCCCAAG+CGG | + | chr7_1:77243164-77243183 | None:intergenic | 40.0% |
| !!! | GTATGTTTTAAGGCTCTGTC+TGG | - | chr7_1:77243180-77243199 | Msa1039910:intron | 40.0% |
| GTTAAGCTGTGTATCCAAAC+AGG | - | chr7_1:77243249-77243268 | Msa1039910:intron | 40.0% | |
| ACGGTATGAACAAATCTTGG+TGG | + | chr7_1:77243486-77243505 | None:intergenic | 40.0% | |
| AGGTTATCAAGAGAGTAAGG+AGG | + | chr7_1:77243674-77243693 | None:intergenic | 40.0% | |
| GGACTTGCCCACATATAATT+TGG | + | chr7_1:77243903-77243922 | None:intergenic | 40.0% | |
| !! | AAAGCTTTGGCTGTGTTTTG+TGG | - | chr7_1:77243969-77243988 | Msa1039910:intron | 40.0% |
| !! | AAGCTTTGGCTGTGTTTTGT+GGG | - | chr7_1:77243970-77243989 | Msa1039910:intron | 40.0% |
| !! | TGATTTTGACAACCTTGCCA+AGG | - | chr7_1:77244196-77244215 | Msa1039910:intron | 40.0% |
| TGCAACTTATGTAGCACCTT+TGG | - | chr7_1:77244245-77244264 | Msa1039910:intron | 40.0% | |
| TGAACGTTCTTCTCTCAAAC+AGG | - | chr7_1:77244498-77244517 | Msa1039910:intron | 40.0% | |
| TGGAATCAGTTGGGACATTA+GGG | + | chr7_1:77244671-77244690 | None:intergenic | 40.0% | |
| ! | GAGGGAGAGAGCATATATAT+GGG | + | chr7_1:77244717-77244736 | None:intergenic | 40.0% |
| ! | AGAGGGAGAGAGCATATATA+TGG | + | chr7_1:77244718-77244737 | None:intergenic | 40.0% |
| GAGAAGAAACCTATGAGATG+AGG | + | chr7_1:77244917-77244936 | None:intergenic | 40.0% | |
| GAAGGCTATCTTAAGCTGAA+TGG | + | chr7_1:77244962-77244981 | None:intergenic | 40.0% | |
| TAATGGAACACATGCATGCA+TGG | + | chr7_1:77245056-77245075 | None:intergenic | 40.0% | |
| TGACAGAACATCAAAGTGTG+TGG | + | chr7_1:77245488-77245507 | None:intergenic | 40.0% | |
| TCAGAGAGCTAGACAGAAAT+GGG | + | chr7_1:77245702-77245721 | None:intergenic | 40.0% | |
| ATCAGAGAGCTAGACAGAAA+TGG | + | chr7_1:77245703-77245722 | None:intergenic | 40.0% | |
| AGCAGTAGAAGAACCTGAAA+TGG | - | chr7_1:77245869-77245888 | Msa1039910:intron | 40.0% | |
| GAATCTGGTAGCTAACAGTT+TGG | - | chr7_1:77246015-77246034 | Msa1039910:CDS | 40.0% | |
| ! | ATAGTTTGCAAGCTGGTTCA+TGG | - | chr7_1:77246095-77246114 | Msa1039910:intron | 40.0% |
| ! | TAATGGATATCTCTGAGCCA+TGG | + | chr7_1:77246245-77246264 | None:intergenic | 40.0% |
| AAAATTTGAATTGGGGGGGG+GGG | + | chr7_1:77242645-77242664 | None:intergenic | 45.0% | |
| GAAAATTTGAATTGGGGGGG+GGG | + | chr7_1:77242646-77242665 | None:intergenic | 45.0% | |
| TGAACTTACACTGTTGCTGG+TGG | + | chr7_1:77242759-77242778 | None:intergenic | 45.0% | |
| ! | TTTTTCCCAAGCGGGATTCA+AGG | + | chr7_1:77243155-77243174 | None:intergenic | 45.0% |
| ! | TACCTGAGTTTTTCCCAAGC+GGG | + | chr7_1:77243163-77243182 | None:intergenic | 45.0% |
| TCAGGCTATCTGCTGCTATA+AGG | - | chr7_1:77243214-77243233 | Msa1039910:intron | 45.0% | |
| ATGTAGCTGATCCCACTTAG+TGG | - | chr7_1:77243352-77243371 | Msa1039910:CDS | 45.0% | |
| TGTAGCTGATCCCACTTAGT+GGG | - | chr7_1:77243353-77243372 | Msa1039910:CDS | 45.0% | |
| TGATCCCACTTAGTGGGATA+TGG | - | chr7_1:77243359-77243378 | Msa1039910:CDS | 45.0% | |
| CAAGCCATATCCCACTAAGT+GGG | + | chr7_1:77243366-77243385 | None:intergenic | 45.0% | |
| ! | TGAACAAATCTTGGTGGCAG+TGG | + | chr7_1:77243480-77243499 | None:intergenic | 45.0% |
| !! | TCAAGTACCTGTTGGCTTAG+TGG | + | chr7_1:77243567-77243586 | None:intergenic | 45.0% |
| GCAAATTCCTGTGGACTTGT+CGG | - | chr7_1:77243819-77243838 | Msa1039910:intron | 45.0% | |
| !! | ATCACTCGCTTGGTCTTTTG+GGG | + | chr7_1:77243924-77243943 | None:intergenic | 45.0% |
| !! | GATCACTCGCTTGGTCTTTT+GGG | + | chr7_1:77243925-77243944 | None:intergenic | 45.0% |
| !! | AGATCACTCGCTTGGTCTTT+TGG | + | chr7_1:77243926-77243945 | None:intergenic | 45.0% |
| ATGGTGAAAGATCACTCGCT+TGG | + | chr7_1:77243934-77243953 | None:intergenic | 45.0% | |
| AGCGAGTGATCTTTCACCAT+TGG | - | chr7_1:77243934-77243953 | Msa1039910:intron | 45.0% | |
| CTTTGTGAATGCTCTGCCAA+TGG | + | chr7_1:77243953-77243972 | None:intergenic | 45.0% | |
| ! | GCAGAGCATTCACAAAGCTT+TGG | - | chr7_1:77243956-77243975 | Msa1039910:intron | 45.0% |
| ACCTTGCCAAGGATCCTATA+TGG | - | chr7_1:77244207-77244226 | Msa1039910:intron | 45.0% | |
| TCCATATAGGATCCTTGGCA+AGG | + | chr7_1:77244211-77244230 | None:intergenic | 45.0% | |
| ! | AATTGCCGTCACTTTGCTCA+TGG | - | chr7_1:77244422-77244441 | Msa1039910:intron | 45.0% |
| CTGGAATCAGTTGGGACATT+AGG | + | chr7_1:77244672-77244691 | None:intergenic | 45.0% | |
| ATGGGATGAGAAGAGAGGAA+GGG | + | chr7_1:77244699-77244718 | None:intergenic | 45.0% | |
| TATGGGATGAGAAGAGAGGA+AGG | + | chr7_1:77244700-77244719 | None:intergenic | 45.0% | |
| TTGCATCTCATAGTCCCATC+TGG | - | chr7_1:77244834-77244853 | Msa1039910:intron | 45.0% | |
| GAGAAGAAGCCTATAAGACG+AGG | + | chr7_1:77244878-77244897 | None:intergenic | 45.0% | |
| AGCTGAATGGTGCAGATTCA+AGG | + | chr7_1:77244949-77244968 | None:intergenic | 45.0% | |
| TTTGTGATGAACGCAGGTTC+AGG | - | chr7_1:77245133-77245152 | Msa1039910:intron | 45.0% | |
| CTGAAGAAACGGAAAGACCT+AGG | - | chr7_1:77245170-77245189 | Msa1039910:intron | 45.0% | |
| CTTGCTCTGTAAAGCTTCCT+AGG | + | chr7_1:77245190-77245209 | None:intergenic | 45.0% | |
| CTAGGAAGCTTTACAGAGCA+AGG | - | chr7_1:77245188-77245207 | Msa1039910:intron | 45.0% | |
| GAACATCAAAGTGTGTGGAC+TGG | + | chr7_1:77245483-77245502 | None:intergenic | 45.0% | |
| GATGTTCTGTCACCTTAGTG+TGG | - | chr7_1:77245496-77245515 | Msa1039910:intron | 45.0% | |
| AAGAAAGAAAGCGACTGCGT+CGG | - | chr7_1:77245582-77245601 | Msa1039910:intron | 45.0% | |
| AAAACCTCCAAACCCCATCA+AGG | + | chr7_1:77245910-77245929 | None:intergenic | 45.0% | |
| ! | TGATGGGGTTTGGAGGTTTT+CGG | - | chr7_1:77245910-77245929 | Msa1039910:intron | 45.0% |
| CTGCAATGTTGAGCAGAATC+TGG | - | chr7_1:77246000-77246019 | Msa1039910:CDS | 45.0% | |
| ! | GGTAGCTAACAGTTTGGTTC+CGG | - | chr7_1:77246021-77246040 | Msa1039910:CDS | 45.0% |
| ! | GTAGCTAACAGTTTGGTTCC+GGG | - | chr7_1:77246022-77246041 | Msa1039910:CDS | 45.0% |
| GTCACTCCCCACATAGATAA+TGG | + | chr7_1:77246216-77246235 | None:intergenic | 45.0% | |
| AGTCGGCTAAATGCTTTGCA+AGG | - | chr7_1:77246287-77246306 | Msa1039910:five_prime_UTR | 45.0% | |
| GTCGGCTAAATGCTTTGCAA+GGG | - | chr7_1:77246288-77246307 | Msa1039910:five_prime_UTR | 45.0% | |
| AAATTTGAATTGGGGGGGGG+GGG | + | chr7_1:77242644-77242663 | None:intergenic | 50.0% | |
| ATTCGGTTGAATTAGGCCGC+TGG | - | chr7_1:77242855-77242874 | Msa1039910:three_prime_UTR | 50.0% | |
| TTCGGTTGAATTAGGCCGCT+GGG | - | chr7_1:77242856-77242875 | Msa1039910:three_prime_UTR | 50.0% | |
| GAATGTGTTGTCAACCCCAG+CGG | + | chr7_1:77242874-77242893 | None:intergenic | 50.0% | |
| TTCAATGGCTTCCTCTGCAC+CGG | + | chr7_1:77243111-77243130 | None:intergenic | 50.0% | |
| AGTAGACCTTGAATCCCGCT+TGG | - | chr7_1:77243146-77243165 | Msa1039910:intron | 50.0% | |
| GTAGACCTTGAATCCCGCTT+GGG | - | chr7_1:77243147-77243166 | Msa1039910:intron | 50.0% | |
| ATCCCGCTTGGGAAAAACTC+AGG | - | chr7_1:77243158-77243177 | Msa1039910:intron | 50.0% | |
| GCATTCACTTAGGCCCTGTT+TGG | + | chr7_1:77243266-77243285 | None:intergenic | 50.0% | |
| ACAGGGCCTAAGTGAATGCA+AGG | - | chr7_1:77243267-77243286 | Msa1039910:intron | 50.0% | |
| CCAAGCCATATCCCACTAAG+TGG | + | chr7_1:77243367-77243386 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATATGGCT+TGG | - | chr7_1:77243364-77243383 | Msa1039910:CDS | 50.0% | |
| !! | TGTTGGCTTAGTGGTGCAAC+AGG | + | chr7_1:77243558-77243577 | None:intergenic | 50.0% |
| TGTTGCACCACTAAGCCAAC+AGG | - | chr7_1:77243557-77243576 | Msa1039910:intron | 50.0% | |
| AATTCCTGTGGACTTGTCGG+TGG | - | chr7_1:77243822-77243841 | Msa1039910:intron | 50.0% | |
| ATTCCTGTGGACTTGTCGGT+GGG | - | chr7_1:77243823-77243842 | Msa1039910:intron | 50.0% | |
| AGTTTGTGAGTGCGTGGTGA+AGG | - | chr7_1:77244306-77244325 | Msa1039910:intron | 50.0% | |
| GAAGGACTCCGCGAACTATT+TGG | - | chr7_1:77244324-77244343 | Msa1039910:intron | 50.0% | |
| ! | TTCCACAGATCAGAGAGCGT+TGG | - | chr7_1:77244459-77244478 | Msa1039910:CDS | 50.0% |
| !! | TCCACAGATCAGAGAGCGTT+GGG | - | chr7_1:77244460-77244479 | Msa1039910:CDS | 50.0% |
| TGGGCACGCTCTAATTGTCT+AGG | + | chr7_1:77244646-77244665 | None:intergenic | 50.0% | |
| CAGTTGGGACATTAGGGACT+GGG | + | chr7_1:77244665-77244684 | None:intergenic | 50.0% | |
| TCAGTTGGGACATTAGGGAC+TGG | + | chr7_1:77244666-77244685 | None:intergenic | 50.0% | |
| AGGGTAGGCTGGAATCAGTT+GGG | + | chr7_1:77244680-77244699 | None:intergenic | 50.0% | |
| AAGGGTAGGCTGGAATCAGT+TGG | + | chr7_1:77244681-77244700 | None:intergenic | 50.0% | |
| GATGAGAAGAGAGGAAGGGT+AGG | + | chr7_1:77244695-77244714 | None:intergenic | 50.0% | |
| TAGAGTAGAGAGGACGTGTG+CGG | + | chr7_1:77244762-77244781 | None:intergenic | 50.0% | |
| TCCTCTCTACTCTAGCCTCT+AGG | - | chr7_1:77244768-77244787 | Msa1039910:intron | 50.0% | |
| TCCTAGAGGCTAGAGTAGAG+AGG | + | chr7_1:77244772-77244791 | None:intergenic | 50.0% | |
| TTCTTCTCTAGCCCTCCTCT+TGG | - | chr7_1:77244890-77244909 | Msa1039910:intron | 50.0% | |
| TCTTCTCTAGCCCTCCTCTT+GGG | - | chr7_1:77244891-77244910 | Msa1039910:intron | 50.0% | |
| GATGAACGCAGGTTCAGGAA+CGG | - | chr7_1:77245138-77245157 | Msa1039910:intron | 50.0% | |
| AGAAAGAAAGCGACTGCGTC+GGG | - | chr7_1:77245583-77245602 | Msa1039910:intron | 50.0% | |
| GAGAGCTAGACAGAAATGGG+AGG | + | chr7_1:77245699-77245718 | None:intergenic | 50.0% | |
| GCAACGTCAGGATCCATTTC+AGG | + | chr7_1:77245885-77245904 | None:intergenic | 50.0% | |
| AGGTTCATCCTAAAGCCACC+CGG | + | chr7_1:77246043-77246062 | None:intergenic | 50.0% | |
| TGGGGAGTGACAAATTGCCA+TGG | - | chr7_1:77246225-77246244 | Msa1039910:five_prime_UTR | 50.0% | |
| TCGGTTGAATTAGGCCGCTG+GGG | - | chr7_1:77242857-77242876 | Msa1039910:three_prime_UTR | 55.0% | |
| !! | TGGGGAGGTGTTGCGACTTA+TGG | - | chr7_1:77243708-77243727 | Msa1039910:intron | 55.0% |
| !! | GGGGAGGTGTTGCGACTTAT+GGG | - | chr7_1:77243709-77243728 | Msa1039910:intron | 55.0% |
| CTGCTCAGTTTGTGAGTGCG+TGG | - | chr7_1:77244300-77244319 | Msa1039910:intron | 55.0% | |
| AGAAGAGAGGAAGGGTAGGC+TGG | + | chr7_1:77244691-77244710 | None:intergenic | 55.0% | |
| TGCACTGTGGGAGAGAGAGA+GGG | + | chr7_1:77244735-77244754 | None:intergenic | 55.0% | |
| GGGTGTGACTCGTTTCCTAG+AGG | + | chr7_1:77244786-77244805 | None:intergenic | 55.0% | |
| TAAGACGAGGCCCAAGAGGA+GGG | + | chr7_1:77244865-77244884 | None:intergenic | 55.0% | |
| ATAAGACGAGGCCCAAGAGG+AGG | + | chr7_1:77244866-77244885 | None:intergenic | 55.0% | |
| CCTATAAGACGAGGCCCAAG+AGG | + | chr7_1:77244869-77244888 | None:intergenic | 55.0% | |
| CCTCTTGGGCCTCGTCTTAT+AGG | - | chr7_1:77244866-77244885 | Msa1039910:intron | 55.0% | |
| TGAGATGAGGCCCAAGAGGA+GGG | + | chr7_1:77244904-77244923 | None:intergenic | 55.0% | |
| ATGAGATGAGGCCCAAGAGG+AGG | + | chr7_1:77244905-77244924 | None:intergenic | 55.0% | |
| CCTATGAGATGAGGCCCAAG+AGG | + | chr7_1:77244908-77244927 | None:intergenic | 55.0% | |
| CCTCTTGGGCCTCATCTCAT+AGG | - | chr7_1:77244905-77244924 | Msa1039910:intron | 55.0% | |
| TCCTGACGTTGCTGCCTTGA+TGG | - | chr7_1:77245893-77245912 | Msa1039910:intron | 55.0% | |
| CCTGACGTTGCTGCCTTGAT+GGG | - | chr7_1:77245894-77245913 | Msa1039910:intron | 55.0% | |
| CTGACGTTGCTGCCTTGATG+GGG | - | chr7_1:77245895-77245914 | Msa1039910:intron | 55.0% | |
| GTTGCTGCCTTGATGGGGTT+TGG | - | chr7_1:77245900-77245919 | Msa1039910:intron | 55.0% | |
| ! | GCTAACAGTTTGGTTCCGGG+TGG | - | chr7_1:77246025-77246044 | Msa1039910:CDS | 55.0% |
| ! | GTTTGGTTCCGGGTGGCTTT+AGG | - | chr7_1:77246032-77246051 | Msa1039910:CDS | 55.0% |
| AATTGGGGGGGGGGGGATTT+GGG | + | chr7_1:77242637-77242656 | None:intergenic | 60.0% | |
| TGCTCGTGAGCGTGAGAGAC+AGG | - | chr7_1:77242929-77242948 | Msa1039910:three_prime_UTR | 60.0% | |
| AATGGCTTCCTCTGCACCGG+AGG | + | chr7_1:77243108-77243127 | None:intergenic | 60.0% | |
| GTACCCACCGACAAGTCCAC+AGG | + | chr7_1:77243829-77243848 | None:intergenic | 60.0% | |
| GCCCAACGCTCTCTGATCTG+TGG | + | chr7_1:77244464-77244483 | None:intergenic | 60.0% | |
| GTGCACTGTGGGAGAGAGAG+AGG | + | chr7_1:77244736-77244755 | None:intergenic | 60.0% | |
| AAGACGAGGCCCAAGAGGAG+GGG | + | chr7_1:77244864-77244883 | None:intergenic | 60.0% | |
| CCCATCAAGGCAGCAACGTC+AGG | + | chr7_1:77245897-77245916 | None:intergenic | 60.0% | |
| GCTGCCTTGATGGGGTTTGG+AGG | - | chr7_1:77245903-77245922 | Msa1039910:intron | 60.0% | |
| GAATTGGGGGGGGGGGGATT+TGG | + | chr7_1:77242638-77242657 | None:intergenic | 65.0% | |
| GTAGAGGTCCTCCGGTGCAG+AGG | - | chr7_1:77243097-77243116 | Msa1039910:intron | 65.0% | |
| GTGTGCGGCAGGTGCACTGT+GGG | + | chr7_1:77244747-77244766 | None:intergenic | 65.0% | |
| GTAGAGAGGACGTGTGCGGC+AGG | + | chr7_1:77244758-77244777 | None:intergenic | 65.0% | |
| ! | AGAGGAGGGGTGCGCCAGAT+GGG | + | chr7_1:77244851-77244870 | None:intergenic | 65.0% |
| ! | AAGAGGAGGGGTGCGCCAGA+TGG | + | chr7_1:77244852-77244871 | None:intergenic | 65.0% |
| ATCTGGCGCACCCCTCCTCT+TGG | - | chr7_1:77244851-77244870 | Msa1039910:intron | 65.0% | |
| TCTGGCGCACCCCTCCTCTT+GGG | - | chr7_1:77244852-77244871 | Msa1039910:intron | 65.0% | |
| CGTGTGCGGCAGGTGCACTG+TGG | + | chr7_1:77244748-77244767 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 77242634 | 77246330 | 77242634 | ID=Msa1039910;Name=Msa1039910 |
| chr7_1 | mRNA | 77242634 | 77246330 | 77242634 | ID=Msa1039910-mRNA-1;Parent=Msa1039910;Name=Msa1039910-mRNA-1;_AED=0.06;_eAED=0.06;_QI=112|1|1|1|1|1|9|380|202 |
| chr7_1 | exon | 77242634 | 77243103 | 77242634 | ID=Msa1039910-mRNA-1:exon:20277;Parent=Msa1039910-mRNA-1 |
| chr7_1 | exon | 77243342 | 77243421 | 77243342 | ID=Msa1039910-mRNA-1:exon:20276;Parent=Msa1039910-mRNA-1 |
| chr7_1 | exon | 77243755 | 77243815 | 77243755 | ID=Msa1039910-mRNA-1:exon:20275;Parent=Msa1039910-mRNA-1 |
| chr7_1 | exon | 77244445 | 77244497 | 77244445 | ID=Msa1039910-mRNA-1:exon:20274;Parent=Msa1039910-mRNA-1 |
| chr7_1 | exon | 77244597 | 77244675 | 77244597 | ID=Msa1039910-mRNA-1:exon:20273;Parent=Msa1039910-mRNA-1 |
| chr7_1 | exon | 77245386 | 77245418 | 77245386 | ID=Msa1039910-mRNA-1:exon:20272;Parent=Msa1039910-mRNA-1 |
| chr7_1 | exon | 77245785 | 77245867 | 77245785 | ID=Msa1039910-mRNA-1:exon:20271;Parent=Msa1039910-mRNA-1 |
| chr7_1 | exon | 77245989 | 77246094 | 77245989 | ID=Msa1039910-mRNA-1:exon:20270;Parent=Msa1039910-mRNA-1 |
| chr7_1 | exon | 77246195 | 77246330 | 77246195 | ID=Msa1039910-mRNA-1:exon:20269;Parent=Msa1039910-mRNA-1 |
| chr7_1 | five_prime_UTR | 77246219 | 77246330 | 77246219 | ID=Msa1039910-mRNA-1:five_prime_utr;Parent=Msa1039910-mRNA-1 |
| chr7_1 | CDS | 77246195 | 77246218 | 77246195 | ID=Msa1039910-mRNA-1:cds;Parent=Msa1039910-mRNA-1 |
| chr7_1 | CDS | 77245989 | 77246094 | 77245989 | ID=Msa1039910-mRNA-1:cds;Parent=Msa1039910-mRNA-1 |
| chr7_1 | CDS | 77245785 | 77245867 | 77245785 | ID=Msa1039910-mRNA-1:cds;Parent=Msa1039910-mRNA-1 |
| chr7_1 | CDS | 77245386 | 77245418 | 77245386 | ID=Msa1039910-mRNA-1:cds;Parent=Msa1039910-mRNA-1 |
| chr7_1 | CDS | 77244597 | 77244675 | 77244597 | ID=Msa1039910-mRNA-1:cds;Parent=Msa1039910-mRNA-1 |
| chr7_1 | CDS | 77244445 | 77244497 | 77244445 | ID=Msa1039910-mRNA-1:cds;Parent=Msa1039910-mRNA-1 |
| chr7_1 | CDS | 77243755 | 77243815 | 77243755 | ID=Msa1039910-mRNA-1:cds;Parent=Msa1039910-mRNA-1 |
| chr7_1 | CDS | 77243342 | 77243421 | 77243342 | ID=Msa1039910-mRNA-1:cds;Parent=Msa1039910-mRNA-1 |
| chr7_1 | CDS | 77243014 | 77243103 | 77243014 | ID=Msa1039910-mRNA-1:cds;Parent=Msa1039910-mRNA-1 |
| chr7_1 | three_prime_UTR | 77242634 | 77243013 | 77242634 | ID=Msa1039910-mRNA-1:three_prime_utr;Parent=Msa1039910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
