Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043350 | XP_004511028.2 | 74.375 | 160 | 10 | 1 | 1 | 129 | 45 | 204 | 6.09e-75 | 232 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043350 | sp|O80366|ARR9_ARATH | 58.710 | 155 | 31 | 1 | 1 | 122 | 1 | 155 | 6.23e-59 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043350 | A0A1S2YWH2 | 74.375 | 160 | 10 | 1 | 1 | 129 | 45 | 204 | 2.91e-75 | 232 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1043350 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043350 | MtrunA17_Chr8g0352871 | 72.903 | 155 | 11 | 1 | 1 | 124 | 1 | 155 | 3.78e-74 | 218 |
| Msa1043350 | MtrunA17_Chr3g0082861 | 66.452 | 155 | 20 | 2 | 7 | 129 | 2 | 156 | 3.26e-66 | 197 |
| Msa1043350 | MtrunA17_Chr7g0256551 | 60.510 | 157 | 30 | 1 | 1 | 125 | 1 | 157 | 3.73e-64 | 195 |
| Msa1043350 | MtrunA17_Chr3g0124861 | 50.943 | 159 | 36 | 4 | 9 | 126 | 22 | 179 | 3.20e-45 | 147 |
| Msa1043350 | MtrunA17_Chr4g0059571 | 52.414 | 145 | 46 | 2 | 2 | 123 | 19 | 163 | 3.83e-43 | 140 |
| Msa1043350 | MtrunA17_Chr3g0128691 | 53.435 | 131 | 34 | 2 | 10 | 114 | 19 | 148 | 3.77e-42 | 136 |
| Msa1043350 | MtrunA17_Chr5g0414931 | 49.020 | 153 | 50 | 3 | 1 | 125 | 7 | 159 | 1.53e-41 | 137 |
| Msa1043350 | MtrunA17_Chr3g0118211 | 46.711 | 152 | 58 | 2 | 1 | 129 | 15 | 166 | 7.87e-41 | 134 |
| Msa1043350 | MtrunA17_Chr1g0170741 | 53.030 | 132 | 36 | 2 | 8 | 113 | 7 | 138 | 2.34e-39 | 130 |
| Msa1043350 | MtrunA17_Chr4g0021731 | 70.930 | 86 | 2 | 1 | 1 | 63 | 3 | 88 | 1.03e-35 | 118 |
| Msa1043350 | MtrunA17_Chr4g0030271 | 28.455 | 123 | 74 | 1 | 7 | 115 | 87 | 209 | 7.47e-13 | 63.9 |
| Msa1043350 | MtrunA17_Chr8g0345901 | 30.328 | 122 | 71 | 2 | 11 | 118 | 38 | 159 | 9.56e-13 | 63.5 |
| Msa1043350 | MtrunA17_Chr8g0376881 | 27.941 | 136 | 77 | 3 | 4 | 123 | 24 | 154 | 8.65e-12 | 60.8 |
| Msa1043350 | MtrunA17_Chr1g0181811 | 33.333 | 75 | 50 | 0 | 41 | 115 | 131 | 205 | 2.24e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043350 | AT3G57040.2 | 58.710 | 155 | 31 | 1 | 1 | 122 | 1 | 155 | 6.33e-60 | 184 |
| Msa1043350 | AT3G57040.1 | 58.710 | 155 | 31 | 1 | 1 | 122 | 1 | 155 | 6.33e-60 | 184 |
| Msa1043350 | AT2G41310.1 | 55.484 | 155 | 38 | 1 | 1 | 124 | 1 | 155 | 4.51e-57 | 177 |
| Msa1043350 | AT1G59940.1 | 55.303 | 132 | 34 | 2 | 8 | 115 | 32 | 162 | 6.45e-44 | 144 |
| Msa1043350 | AT3G56380.1 | 50.725 | 138 | 44 | 2 | 4 | 117 | 15 | 152 | 2.97e-43 | 139 |
| Msa1043350 | AT3G48100.1 | 51.079 | 139 | 44 | 1 | 2 | 116 | 18 | 156 | 4.22e-43 | 140 |
| Msa1043350 | AT1G59940.2 | 54.198 | 131 | 37 | 1 | 8 | 115 | 124 | 254 | 3.23e-42 | 142 |
| Msa1043350 | AT1G10470.3 | 53.788 | 132 | 36 | 2 | 8 | 115 | 19 | 149 | 3.29e-42 | 139 |
| Msa1043350 | AT1G10470.1 | 53.788 | 132 | 36 | 2 | 8 | 115 | 33 | 163 | 3.54e-42 | 140 |
| Msa1043350 | AT3G56380.2 | 50.360 | 139 | 44 | 3 | 4 | 117 | 15 | 153 | 1.88e-41 | 135 |
| Msa1043350 | AT1G19050.1 | 49.265 | 136 | 46 | 1 | 8 | 120 | 23 | 158 | 4.19e-41 | 135 |
| Msa1043350 | AT5G62920.1 | 53.846 | 130 | 37 | 1 | 9 | 115 | 25 | 154 | 5.94e-41 | 134 |
| Msa1043350 | AT2G40670.1 | 48.529 | 136 | 44 | 2 | 8 | 117 | 28 | 163 | 3.85e-40 | 132 |
| Msa1043350 | AT1G74890.1 | 50.365 | 137 | 45 | 2 | 8 | 121 | 17 | 153 | 1.26e-39 | 132 |
| Msa1043350 | AT2G40670.2 | 48.175 | 137 | 44 | 3 | 8 | 117 | 28 | 164 | 2.34e-38 | 127 |
| Msa1043350 | AT2G07440.1 | 61.765 | 68 | 25 | 1 | 58 | 124 | 2 | 69 | 1.01e-22 | 87.0 |
| Msa1043350 | AT1G10470.2 | 60.377 | 53 | 21 | 0 | 63 | 115 | 35 | 87 | 1.71e-16 | 72.0 |
| Msa1043350 | AT5G60100.7 | 30.252 | 119 | 69 | 1 | 11 | 115 | 66 | 184 | 1.33e-11 | 60.8 |
| Msa1043350 | AT5G60100.6 | 30.252 | 119 | 69 | 1 | 11 | 115 | 66 | 184 | 1.33e-11 | 60.8 |
| Msa1043350 | AT5G60100.4 | 30.252 | 119 | 69 | 1 | 11 | 115 | 66 | 184 | 1.33e-11 | 60.8 |
| Msa1043350 | AT5G60100.2 | 30.252 | 119 | 69 | 1 | 11 | 115 | 66 | 184 | 1.36e-11 | 60.8 |
| Msa1043350 | AT5G60100.5 | 30.252 | 119 | 69 | 1 | 11 | 115 | 66 | 184 | 2.34e-11 | 60.1 |
| Msa1043350 | AT5G60100.3 | 30.252 | 119 | 69 | 1 | 11 | 115 | 66 | 184 | 2.34e-11 | 60.1 |
| Msa1043350 | AT5G60100.1 | 30.252 | 119 | 69 | 1 | 11 | 115 | 66 | 184 | 2.34e-11 | 60.1 |
| Msa1043350 | AT2G46790.3 | 26.087 | 138 | 87 | 2 | 6 | 129 | 34 | 170 | 6.65e-11 | 58.9 |
| Msa1043350 | AT2G46790.1 | 26.087 | 138 | 87 | 2 | 6 | 129 | 34 | 170 | 7.70e-11 | 58.5 |
Find 19 sgRNAs with CRISPR-Local
Find 524 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGATTGTTGAACTGGTTTC+AGG | 0.173333 | 7_2:-1568837 | None:intergenic |
| CGGTATGTCTTTAAAAGATT+TGG | 0.218132 | 7_2:-1568577 | None:intergenic |
| AGAGACTCAGTTCCATGTTT+TGG | 0.251951 | 7_2:+1562579 | Msa1043350:CDS |
| TCTCACCTGCTTATCCTTGA+TGG | 0.274708 | 7_2:-1568627 | None:intergenic |
| TTTACATCTGATTGTTGAAC+TGG | 0.343425 | 7_2:-1568844 | None:intergenic |
| TATCTTTCAAGCAATGAGTA+TGG | 0.359817 | 7_2:+1562552 | None:intergenic |
| TATTGTATGCCAGGGATGAC+TGG | 0.449232 | 7_2:+1568157 | Msa1043350:CDS |
| ACTCTTGATTTCAACAAATG+AGG | 0.453741 | 7_2:-1568877 | None:intergenic |
| ATAACAGATTATTGTATGCC+AGG | 0.463952 | 7_2:+1568148 | Msa1043350:CDS |
| TTTGTTGAAATCAAGAGTTA+AGG | 0.471711 | 7_2:+1568882 | Msa1043350:CDS |
| TCTGAAGACATAATCACAAC+CGG | 0.515090 | 7_2:-1568597 | None:intergenic |
| TTGATAGAATGTTGATTGAG+AGG | 0.516155 | 7_2:+1562620 | Msa1043350:CDS |
| ATGTTCCATCAAGGATAAGC+AGG | 0.529602 | 7_2:+1568622 | Msa1043350:CDS |
| ATGTGGCTTCAGAAGTTCAT+GGG | 0.534908 | 7_2:+1568008 | Msa1043350:intron |
| AGATCATAGCCAGTCATCCC+TGG | 0.546401 | 7_2:-1568166 | None:intergenic |
| TAACAGATTATTGTATGCCA+GGG | 0.564090 | 7_2:+1568149 | Msa1043350:CDS |
| TATCATCAACAGCCAAAACA+TGG | 0.580138 | 7_2:-1562591 | None:intergenic |
| CTTCAGAGAATGTTCCATCA+AGG | 0.588664 | 7_2:+1568613 | Msa1043350:CDS |
| TGTGGCTTCAGAAGTTCATG+GGG | 0.695893 | 7_2:+1568009 | Msa1043350:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATAATTATTATTTATTTTG+TGG | + | chr7_2:1562817-1562836 | Msa1043350:intron | 10.0% |
| !!! | AATTTTTCTTAATATTATGA+TGG | + | chr7_2:1568046-1568065 | Msa1043350:intron | 10.0% |
| !!! | TTTTTTAACAAATCAGTTAA+AGG | - | chr7_2:1565705-1565724 | None:intergenic | 15.0% |
| !!! | TTTAACTGATTTGTTAAAAA+AGG | + | chr7_2:1565704-1565723 | Msa1043350:intron | 15.0% |
| !!! | TTTATTTTGCTTTTCTATTT+AGG | + | chr7_2:1568349-1568368 | Msa1043350:intron | 15.0% |
| !! | ATATTTAAATAGAAGTGATT+TGG | + | chr7_2:1568394-1568413 | Msa1043350:intron | 15.0% |
| !!! | CTTTGTTTTCTTTAAAATTT+TGG | - | chr7_2:1568498-1568517 | None:intergenic | 15.0% |
| !!! | TCAATATACTATTTTGTTGA+AGG | + | chr7_2:1562763-1562782 | Msa1043350:intron | 20.0% |
| !! | TTATTCCTTCTAAATTAGTT+GGG | - | chr7_2:1562918-1562937 | None:intergenic | 20.0% |
| !! | AAATAATACAGGTATAGAAA+TGG | - | chr7_2:1563137-1563156 | None:intergenic | 20.0% |
| !!! | TTTTTCTTGACTAAAATAAC+CGG | - | chr7_2:1565063-1565082 | None:intergenic | 20.0% |
| !!! | ATTTTAGTCAAGAAAAAAGA+TGG | + | chr7_2:1565066-1565085 | Msa1043350:intron | 20.0% |
| !! | AAGTTATCTAAATGTTCATT+TGG | + | chr7_2:1565498-1565517 | Msa1043350:intron | 20.0% |
| !! | AGTTATCTAAATGTTCATTT+GGG | + | chr7_2:1565499-1565518 | Msa1043350:intron | 20.0% |
| !! | TTTCAAATAGAATATAAACC+AGG | + | chr7_2:1566116-1566135 | Msa1043350:intron | 20.0% |
| !! | ACTGCTATACAAAAATAAAT+TGG | + | chr7_2:1566322-1566341 | Msa1043350:intron | 20.0% |
| !!! | ATACTTTTTGTATCAATACT+GGG | - | chr7_2:1566361-1566380 | None:intergenic | 20.0% |
| !!! | AATACTTTTTGTATCAATAC+TGG | - | chr7_2:1566362-1566381 | None:intergenic | 20.0% |
| !! | TTATTCCTTCTAAATTAGTT+GGG | - | chr7_2:1562918-1562937 | None:intergenic | 20.0% |
| !! | AAATAATACAGGTATAGAAA+TGG | - | chr7_2:1563137-1563156 | None:intergenic | 20.0% |
| !! | TTTGAATGTATCAAAAAGTT+TGG | + | chr7_2:1568322-1568341 | Msa1043350:intron | 20.0% |
| !!! | TAACATCAAGTTAACAATTT+TGG | - | chr7_2:1568527-1568546 | None:intergenic | 20.0% |
| ! | ATTGTAAAGATGTAATGTGA+TGG | + | chr7_2:1562709-1562728 | Msa1043350:intron | 25.0% |
| ! | TTGTAAAGATGTAATGTGAT+GGG | + | chr7_2:1562710-1562729 | Msa1043350:intron | 25.0% |
| ! | TGAAATGATAGTTACTACAA+TGG | + | chr7_2:1562848-1562867 | Msa1043350:intron | 25.0% |
| ! | CTTATTCCTTCTAAATTAGT+TGG | - | chr7_2:1562919-1562938 | None:intergenic | 25.0% |
| ! | AATTTAGAAGGAATAAGAAG+AGG | + | chr7_2:1562922-1562941 | Msa1043350:intron | 25.0% |
| ! | AAATAACAGAAATATCAGAG+AGG | - | chr7_2:1563046-1563065 | None:intergenic | 25.0% |
| ! | ATTATTAATCGATCCAAATC+TGG | - | chr7_2:1563524-1563543 | None:intergenic | 25.0% |
| ! | AATAAGTTTATCACATTGCA+AGG | + | chr7_2:1564661-1564680 | Msa1043350:intron | 25.0% |
| ! | AGATCTTATTCATAAGACTT+TGG | - | chr7_2:1565347-1565366 | None:intergenic | 25.0% |
| ! | TAAAAAAGGATGCATTTGTA+TGG | + | chr7_2:1565718-1565737 | Msa1043350:intron | 25.0% |
| !!! | GTAAATGGTTTTGAAAAATC+CGG | - | chr7_2:1565813-1565832 | None:intergenic | 25.0% |
| ! | TCTTAGAGAAATAAGCAATT+GGG | - | chr7_2:1565893-1565912 | None:intergenic | 25.0% |
| ! | TTCTTAGAGAAATAAGCAAT+TGG | - | chr7_2:1565894-1565913 | None:intergenic | 25.0% |
| !! | TCTTTTCAATAACAGGAAAA+GGG | - | chr7_2:1567312-1567331 | None:intergenic | 25.0% |
| !! | ATCTTTTCAATAACAGGAAA+AGG | - | chr7_2:1567313-1567332 | None:intergenic | 25.0% |
| ! | TTTCCTGTTATTGAAAAGAT+AGG | + | chr7_2:1567313-1567332 | Msa1043350:intron | 25.0% |
| ! | CTTATTCCTTCTAAATTAGT+TGG | - | chr7_2:1562919-1562938 | None:intergenic | 25.0% |
| ! | AATTTAGAAGGAATAAGAAG+AGG | + | chr7_2:1562922-1562941 | Msa1043350:intron | 25.0% |
| ! | AAATAACAGAAATATCAGAG+AGG | - | chr7_2:1563046-1563065 | None:intergenic | 25.0% |
| !!! | AGTAAGGCTTTAAAATTTCT+TGG | + | chr7_2:1567974-1567993 | Msa1043350:intron | 25.0% |
| ! | TTGATTCATATTATTCATGC+AGG | + | chr7_2:1568105-1568124 | Msa1043350:intron | 25.0% |
| ! | TGAAAATGAGCACAAAATTA+TGG | - | chr7_2:1568299-1568318 | None:intergenic | 25.0% |
| ! | TGATTAGTGATTAGTGATTT+GGG | + | chr7_2:1568466-1568485 | Msa1043350:intron | 25.0% |
| !! | TAAACAATTCTTTGATTTCC+AGG | + | chr7_2:1568551-1568570 | Msa1043350:intron | 25.0% |
| !!! | CAAATCTTTTAAAGACATAC+CGG | + | chr7_2:1568578-1568597 | Msa1043350:CDS | 25.0% |
| ! | ACAATTAGTCCATAATATGT+GGG | - | chr7_2:1568772-1568791 | None:intergenic | 25.0% |
| ! | AACAATTAGTCCATAATATG+TGG | - | chr7_2:1568773-1568792 | None:intergenic | 25.0% |
| ! | TTTGTTGAAATCAAGAGTTA+AGG | + | chr7_2:1568882-1568901 | Msa1043350:CDS | 25.0% |
| ! | TTGATAGAATGTTGATTGAG+AGG | + | chr7_2:1562620-1562639 | Msa1043350:CDS | 30.0% |
| ! | CATGAAAAGAAGAAGTTTTG+AGG | - | chr7_2:1562648-1562667 | None:intergenic | 30.0% |
| ! | CTCAAAACTTCTTCTTTTCA+TGG | + | chr7_2:1562646-1562665 | Msa1043350:CDS | 30.0% |
| TGTAAAGATGTAATGTGATG+GGG | + | chr7_2:1562711-1562730 | Msa1043350:intron | 30.0% | |
| ! | ACATATGAGCATAGTTTGTA+TGG | + | chr7_2:1562740-1562759 | Msa1043350:intron | 30.0% |
| !! | AATGGACTGTTATGAAAGAA+GGG | + | chr7_2:1562866-1562885 | Msa1043350:intron | 30.0% |
| !! | ATTTTGATCAACTCCGTAAA+AGG | - | chr7_2:1563104-1563123 | None:intergenic | 30.0% |
| ACAGGTATAGAAATGGAAAT+AGG | - | chr7_2:1563130-1563149 | None:intergenic | 30.0% | |
| ! | CAGTGATGGAAAAATAATAC+AGG | - | chr7_2:1563148-1563167 | None:intergenic | 30.0% |
| ! | TTTTCCATCACTGTTACATT+TGG | + | chr7_2:1563155-1563174 | Msa1043350:intron | 30.0% |
| ! | GTTAAACTGGATTTTCAAAG+CGG | + | chr7_2:1563472-1563491 | Msa1043350:intron | 30.0% |
| AATAATTGCATCAGTTCACT+TGG | + | chr7_2:1563538-1563557 | Msa1043350:intron | 30.0% | |
| ! | TTCTTAGATTGTTTTCTCAG+TGG | + | chr7_2:1563779-1563798 | Msa1043350:intron | 30.0% |
| ! | ATTACAATCTGAGATTCGAA+GGG | + | chr7_2:1563802-1563821 | Msa1043350:intron | 30.0% |
| ! | GTACTTTTCCTCAAACAATT+TGG | - | chr7_2:1563876-1563895 | None:intergenic | 30.0% |
| ACTACATACCAACCTAAAAA+TGG | + | chr7_2:1563953-1563972 | Msa1043350:intron | 30.0% | |
| !!! | TATTTGGACCATTTTTAGGT+TGG | - | chr7_2:1563964-1563983 | None:intergenic | 30.0% |
| !! | TGAGTATTTGGACCATTTTT+AGG | - | chr7_2:1563968-1563987 | None:intergenic | 30.0% |
| ! | TTTTCTGTTGGTATGAGTTT+GGG | - | chr7_2:1564006-1564025 | None:intergenic | 30.0% |
| ! | TTTTTCTGTTGGTATGAGTT+TGG | - | chr7_2:1564007-1564026 | None:intergenic | 30.0% |
| !!! | ATAGGTTTTTGATTTGGAGT+GGG | - | chr7_2:1564049-1564068 | None:intergenic | 30.0% |
| AGTAACATAACCCTTTATCA+CGG | - | chr7_2:1564111-1564130 | None:intergenic | 30.0% | |
| TCTAATGATGCTTCAGTTAA+CGG | + | chr7_2:1564177-1564196 | Msa1043350:intron | 30.0% | |
| TTGTCATTAAATGCGATGAA+GGG | + | chr7_2:1564283-1564302 | Msa1043350:intron | 30.0% | |
| TTCAATACTTGTGCAATATG+TGG | - | chr7_2:1564406-1564425 | None:intergenic | 30.0% | |
| !! | AATTCTGGTTCAATGTTTGT+AGG | - | chr7_2:1564820-1564839 | None:intergenic | 30.0% |
| TACAAACATTGAACCAGAAT+TGG | + | chr7_2:1564819-1564838 | Msa1043350:intron | 30.0% | |
| ATTTCATGATTATGGTCTCT+TGG | - | chr7_2:1564901-1564920 | None:intergenic | 30.0% | |
| GAAGCGTAATTTCATGATTA+TGG | - | chr7_2:1564909-1564928 | None:intergenic | 30.0% | |
| TTCTTTCTATTTGTTCCTTC+TGG | - | chr7_2:1564981-1565000 | None:intergenic | 30.0% | |
| GAAGGAACAAATAGAAAGAA+TGG | + | chr7_2:1564981-1565000 | Msa1043350:intron | 30.0% | |
| TCAAGAAAAAAGATGGAAGT+TGG | + | chr7_2:1565073-1565092 | Msa1043350:intron | 30.0% | |
| GAATTACTTGATGAGTTACA+CGG | + | chr7_2:1565168-1565187 | Msa1043350:intron | 30.0% | |
| AATTACTTGATGAGTTACAC+GGG | + | chr7_2:1565169-1565188 | Msa1043350:intron | 30.0% | |
| ACATCTACAACAATTGGAAT+GGG | + | chr7_2:1565440-1565459 | Msa1043350:intron | 30.0% | |
| TAAATGTTCATTTGGGCAAA+GGG | + | chr7_2:1565506-1565525 | Msa1043350:intron | 30.0% | |
| ! | CAAAGGGAAGTTGATTATTT+GGG | + | chr7_2:1565522-1565541 | Msa1043350:intron | 30.0% |
| AGAATTACTAGCTATAACAG+AGG | + | chr7_2:1565953-1565972 | Msa1043350:intron | 30.0% | |
| CAAAAGTTTGAAGAGCTTAT+TGG | + | chr7_2:1566034-1566053 | Msa1043350:intron | 30.0% | |
| ! | ATTGTCTAGAATGTTCATGT+TGG | + | chr7_2:1566163-1566182 | Msa1043350:intron | 30.0% |
| AATGGGTATACTGTTAAAGA+AGG | + | chr7_2:1566296-1566315 | Msa1043350:intron | 30.0% | |
| ATGGGTATACTGTTAAAGAA+GGG | + | chr7_2:1566297-1566316 | Msa1043350:intron | 30.0% | |
| !! | GACTAAGTATAGTCATTTTG+TGG | + | chr7_2:1566667-1566686 | Msa1043350:intron | 30.0% |
| TTGAATGTGGCAAAATTACA+TGG | + | chr7_2:1566737-1566756 | Msa1043350:intron | 30.0% | |
| CAACACTTATTTAAGTCACA+GGG | + | chr7_2:1566815-1566834 | Msa1043350:intron | 30.0% | |
| CATTTCCAGACACTTATTTA+GGG | - | chr7_2:1566897-1566916 | None:intergenic | 30.0% | |
| ACATTTCCAGACACTTATTT+AGG | - | chr7_2:1566898-1566917 | None:intergenic | 30.0% | |
| AGAAATCTGTAATCATTACC+CGG | + | chr7_2:1567597-1567616 | Msa1043350:intron | 30.0% | |
| !! | GAAGCATTGTTATGAAAGAA+GGG | + | chr7_2:1567656-1567675 | Msa1043350:intron | 30.0% |
| !! | ATTTTGATCAACTCCGTAAA+AGG | - | chr7_2:1563104-1563123 | None:intergenic | 30.0% |
| ACAGGTATAGAAATGGAAAT+AGG | - | chr7_2:1563130-1563149 | None:intergenic | 30.0% | |
| ! | CAGTGATGGAAAAATAATAC+AGG | - | chr7_2:1563148-1563167 | None:intergenic | 30.0% |
| ! | ATTTTTCCATCACTGTTACA+TGG | + | chr7_2:1563153-1563172 | Msa1043350:intron | 30.0% |
| !! | GGCTTTAAAATTTCTTGGTT+TGG | + | chr7_2:1567979-1567998 | Msa1043350:intron | 30.0% |
| !! | AAAATTTCTTGGTTTGGTTG+AGG | + | chr7_2:1567985-1568004 | Msa1043350:intron | 30.0% |
| !!! | GACTATTTTGATGTATACGT+TGG | + | chr7_2:1568073-1568092 | Msa1043350:intron | 30.0% |
| ATAACAGATTATTGTATGCC+AGG | + | chr7_2:1568148-1568167 | Msa1043350:CDS | 30.0% | |
| TAACAGATTATTGTATGCCA+GGG | + | chr7_2:1568149-1568168 | Msa1043350:CDS | 30.0% | |
| CTGATTAGTGATTAGTGATT+TGG | + | chr7_2:1568465-1568484 | Msa1043350:intron | 30.0% | |
| ! | CTTTAAAAGATTTGGATTCC+TGG | - | chr7_2:1568572-1568591 | None:intergenic | 30.0% |
| ! | CGGTATGTCTTTAAAAGATT+TGG | - | chr7_2:1568580-1568599 | None:intergenic | 30.0% |
| !!! | TGTATCAGATGTTTTGAAGA+AGG | + | chr7_2:1568799-1568818 | Msa1043350:intron | 30.0% |
| TTTACATCTGATTGTTGAAC+TGG | - | chr7_2:1568847-1568866 | None:intergenic | 30.0% | |
| ACTCTTGATTTCAACAAATG+AGG | - | chr7_2:1568880-1568899 | None:intergenic | 30.0% | |
| TATCATCAACAGCCAAAACA+TGG | - | chr7_2:1562594-1562613 | None:intergenic | 35.0% | |
| !! | CAATGGACTGTTATGAAAGA+AGG | + | chr7_2:1562865-1562884 | Msa1043350:intron | 35.0% |
| AAGGAATAAGAAGAGGAAAC+AGG | + | chr7_2:1562929-1562948 | Msa1043350:intron | 35.0% | |
| AAATATCAGAGAGGAGAAAG+AGG | - | chr7_2:1563037-1563056 | None:intergenic | 35.0% | |
| !!! | GATGTCATTTTGAAGCTCTT+TGG | - | chr7_2:1563219-1563238 | None:intergenic | 35.0% |
| ATGAAGAAGATTGAAACGCT+CGG | - | chr7_2:1563318-1563337 | None:intergenic | 35.0% | |
| TTAACAGATCTGACCTGAAA+CGG | - | chr7_2:1563419-1563438 | None:intergenic | 35.0% | |
| ATGGAAAGAACGTGTTAAAC+TGG | + | chr7_2:1563459-1563478 | Msa1043350:intron | 35.0% | |
| CTATACTGAGTTTAATGCAC+TGG | + | chr7_2:1563724-1563743 | Msa1043350:intron | 35.0% | |
| ! | GATTACAATCTGAGATTCGA+AGG | + | chr7_2:1563801-1563820 | Msa1043350:intron | 35.0% |
| AAACAATTTGGCTAGTGCAA+AGG | - | chr7_2:1563864-1563883 | None:intergenic | 35.0% | |
| !!! | CTTTGGGAGAATTTTGGTTT+GGG | - | chr7_2:1563908-1563927 | None:intergenic | 35.0% |
| !!! | TTTTAGGTTGGTATGTAGTC+TGG | - | chr7_2:1563952-1563971 | None:intergenic | 35.0% |
| !!! | CATAGGTTTTTGATTTGGAG+TGG | - | chr7_2:1564050-1564069 | None:intergenic | 35.0% |
| CACTCCAAATCAAAAACCTA+TGG | + | chr7_2:1564048-1564067 | Msa1043350:intron | 35.0% | |
| !! | ATGGCCATAGGTTTTTGATT+TGG | - | chr7_2:1564055-1564074 | None:intergenic | 35.0% |
| !! | GATATGTTTTTGATGGCCAT+AGG | - | chr7_2:1564067-1564086 | None:intergenic | 35.0% |
| TCATCGCATTTAATGACAAG+TGG | - | chr7_2:1564282-1564301 | None:intergenic | 35.0% | |
| CTTGTCATTAAATGCGATGA+AGG | + | chr7_2:1564282-1564301 | Msa1043350:intron | 35.0% | |
| !!! | AAACATACCGGTTCAAGTTT+TGG | + | chr7_2:1564348-1564367 | Msa1043350:intron | 35.0% |
| TGCAATATGTGGTTGTAAGT+AGG | - | chr7_2:1564395-1564414 | None:intergenic | 35.0% | |
| GGGAAATGGACAAAGTTTAA+TGG | + | chr7_2:1564465-1564484 | Msa1043350:intron | 35.0% | |
| GACTTGAAATTACAAGTCCA+GGG | + | chr7_2:1564505-1564524 | Msa1043350:intron | 35.0% | |
| GAAATATCAATTCATGTCCC+TGG | - | chr7_2:1564525-1564544 | None:intergenic | 35.0% | |
| GGGACATGAATTGATATTTC+TGG | + | chr7_2:1564525-1564544 | Msa1043350:intron | 35.0% | |
| TTGCAAGGAGAAAAGCAAAA+AGG | + | chr7_2:1564676-1564695 | Msa1043350:intron | 35.0% | |
| CCAGAAAGTCTTTCAAAATC+CGG | + | chr7_2:1564861-1564880 | Msa1043350:intron | 35.0% | |
| CATGAAATTACGCTTCAAGA+AGG | + | chr7_2:1564913-1564932 | Msa1043350:intron | 35.0% | |
| ATTACTTGATGAGTTACACG+GGG | + | chr7_2:1565170-1565189 | Msa1043350:intron | 35.0% | |
| GCCAGAAGATTGTTATAAGA+CGG | + | chr7_2:1565248-1565267 | Msa1043350:intron | 35.0% | |
| ! | AGTGGTTAGTAATGCCTTTT+GGG | + | chr7_2:1565298-1565317 | Msa1043350:intron | 35.0% |
| ! | ATAAGACTTTGGAAAGTAGC+AGG | - | chr7_2:1565336-1565355 | None:intergenic | 35.0% |
| GCTTTCACATCTACAACAAT+TGG | + | chr7_2:1565434-1565453 | Msa1043350:intron | 35.0% | |
| CACATCTACAACAATTGGAA+TGG | + | chr7_2:1565439-1565458 | Msa1043350:intron | 35.0% | |
| CTAAATGTTCATTTGGGCAA+AGG | + | chr7_2:1565505-1565524 | Msa1043350:intron | 35.0% | |
| ! | GCAAAGGGAAGTTGATTATT+TGG | + | chr7_2:1565521-1565540 | Msa1043350:intron | 35.0% |
| AGGTTAAAGATGTGTTAGCT+TGG | + | chr7_2:1565586-1565605 | Msa1043350:intron | 35.0% | |
| TGCTTCAGATTTATAGGTGT+AGG | - | chr7_2:1565612-1565631 | None:intergenic | 35.0% | |
| CTAAGCTGCTTCAGATTTAT+AGG | - | chr7_2:1565618-1565637 | None:intergenic | 35.0% | |
| ! | ATAAATCTGAAGCAGCTTAG+AGG | + | chr7_2:1565618-1565637 | Msa1043350:intron | 35.0% |
| TGGGTTTAACTGGGTATTAT+AGG | + | chr7_2:1565646-1565665 | Msa1043350:intron | 35.0% | |
| TGCATTTGTATGGAATGCTA+AGG | + | chr7_2:1565728-1565747 | Msa1043350:intron | 35.0% | |
| AAGTTCAGGCATTACTTGTT+GGG | + | chr7_2:1565984-1566003 | Msa1043350:intron | 35.0% | |
| GTTACAAACTTCAGAACAAC+AGG | + | chr7_2:1566064-1566083 | Msa1043350:intron | 35.0% | |
| CGTGGCTACATAAATTCATT+GGG | + | chr7_2:1566087-1566106 | Msa1043350:intron | 35.0% | |
| ATTCTAGACAATGAATCAGC+CGG | - | chr7_2:1566155-1566174 | None:intergenic | 35.0% | |
| !! | TAAGAACATGCTTTGAGGTT+CGG | - | chr7_2:1566195-1566214 | None:intergenic | 35.0% |
| ATGGATAACATTCAGCAACA+AGG | + | chr7_2:1566263-1566282 | Msa1043350:intron | 35.0% | |
| TGGATAACATTCAGCAACAA+GGG | + | chr7_2:1566264-1566283 | Msa1043350:intron | 35.0% | |
| TGTATCAATACTGGGTTGTT+GGG | - | chr7_2:1566353-1566372 | None:intergenic | 35.0% | |
| TTGTATCAATACTGGGTTGT+TGG | - | chr7_2:1566354-1566373 | None:intergenic | 35.0% | |
| GAGTACCATACATCTCATAT+TGG | + | chr7_2:1566386-1566405 | Msa1043350:intron | 35.0% | |
| TACCATACATCTCATATTGG+AGG | + | chr7_2:1566389-1566408 | Msa1043350:intron | 35.0% | |
| ACAGTAACAACATTACCAAC+TGG | + | chr7_2:1566527-1566546 | Msa1043350:intron | 35.0% | |
| CAGTAACAACATTACCAACT+GGG | + | chr7_2:1566528-1566547 | Msa1043350:intron | 35.0% | |
| ACCTATACCAAGTCAGATAT+GGG | + | chr7_2:1566565-1566584 | Msa1043350:intron | 35.0% | |
| !! | GTAGCAATGGATTTTATCAC+TGG | + | chr7_2:1566593-1566612 | Msa1043350:intron | 35.0% |
| ACTGGATTGCCAAATTCATT+TGG | + | chr7_2:1566611-1566630 | Msa1043350:intron | 35.0% | |
| CTGGATTGCCAAATTCATTT+GGG | + | chr7_2:1566612-1566631 | Msa1043350:intron | 35.0% | |
| TGAAGCTTTCATGTTGAATG+TGG | + | chr7_2:1566724-1566743 | Msa1043350:intron | 35.0% | |
| ! | CTGTCAGAAACAATTGACTT+CGG | - | chr7_2:1566767-1566786 | None:intergenic | 35.0% |
| !! | GAAGTCAATTGTTTCTGACA+GGG | + | chr7_2:1566766-1566785 | Msa1043350:intron | 35.0% |
| !! | AATTGTTTCTGACAGGGATA+AGG | + | chr7_2:1566772-1566791 | Msa1043350:intron | 35.0% |
| !! | AGGTATTCACAAGTGGATTT+TGG | + | chr7_2:1566792-1566811 | Msa1043350:intron | 35.0% |
| GCAACACTTATTTAAGTCAC+AGG | + | chr7_2:1566814-1566833 | Msa1043350:intron | 35.0% | |
| TACTACACTTAGCAGAGTAT+TGG | + | chr7_2:1566963-1566982 | Msa1043350:intron | 35.0% | |
| !!! | ACTCCTTTTAAGGCACTATA+TGG | + | chr7_2:1567019-1567038 | Msa1043350:intron | 35.0% |
| !!! | CTCCTTTTAAGGCACTATAT+GGG | + | chr7_2:1567020-1567039 | Msa1043350:intron | 35.0% |
| TCAAGGAACAATTAGCACAA+AGG | + | chr7_2:1567098-1567117 | Msa1043350:intron | 35.0% | |
| CAAGGAACAATTAGCACAAA+GGG | + | chr7_2:1567099-1567118 | Msa1043350:intron | 35.0% | |
| ACAAGTAATGAAGAACCAAG+CGG | + | chr7_2:1567165-1567184 | Msa1043350:intron | 35.0% | |
| AAGCTTCCTATGAGATACTT+TGG | + | chr7_2:1567286-1567305 | Msa1043350:intron | 35.0% | |
| ! | GCTCCTATCTTTTCAATAAC+AGG | - | chr7_2:1567319-1567338 | None:intergenic | 35.0% |
| ATTCTTTCAACTGCGAGATA+TGG | - | chr7_2:1567393-1567412 | None:intergenic | 35.0% | |
| TCGCAGTTGAAAGAATTCAA+AGG | + | chr7_2:1567397-1567416 | Msa1043350:intron | 35.0% | |
| GATTCAAGAATGGTGATACA+AGG | + | chr7_2:1567499-1567518 | Msa1043350:intron | 35.0% | |
| !! | TTCCACAAGTGTTGATTCAA+TGG | + | chr7_2:1567533-1567552 | Msa1043350:intron | 35.0% |
| !! | TCCACAAGTGTTGATTCAAT+GGG | + | chr7_2:1567534-1567553 | Msa1043350:intron | 35.0% |
| AGGACAGGATTGAGTTTAAA+GGG | + | chr7_2:1567632-1567651 | Msa1043350:intron | 35.0% | |
| !! | GGAAGCATTGTTATGAAAGA+AGG | + | chr7_2:1567655-1567674 | Msa1043350:intron | 35.0% |
| AAGGAATAAGAAGAGGAAAC+AGG | + | chr7_2:1562929-1562948 | Msa1043350:intron | 35.0% | |
| AAATATCAGAGAGGAGAAAG+AGG | - | chr7_2:1563037-1563056 | None:intergenic | 35.0% | |
| TGATCTGCTCAGAAAAATCA+AGG | + | chr7_2:1568183-1568202 | Msa1043350:CDS | 35.0% | |
| TCTGAAGACATAATCACAAC+CGG | - | chr7_2:1568600-1568619 | None:intergenic | 35.0% | |
| ATGTGAAGTCCCACATATTA+TGG | + | chr7_2:1568760-1568779 | Msa1043350:intron | 35.0% | |
| ! | AGAGACTCAGTTCCATGTTT+TGG | + | chr7_2:1562579-1562598 | Msa1043350:CDS | 40.0% |
| TTATGAAAGAAGGGCCTAGA+AGG | + | chr7_2:1562875-1562894 | Msa1043350:intron | 40.0% | |
| TGTACTTAACACTAGGCTCA+AGG | + | chr7_2:1562957-1562976 | Msa1043350:intron | 40.0% | |
| GTACTTAACACTAGGCTCAA+GGG | + | chr7_2:1562958-1562977 | Msa1043350:intron | 40.0% | |
| AGGCTCAAGGGTTATAAAGT+AGG | + | chr7_2:1562970-1562989 | Msa1043350:intron | 40.0% | |
| GGTTATAAAGTAGGCATGTG+AGG | + | chr7_2:1562979-1562998 | Msa1043350:intron | 40.0% | |
| CATGTGAGGAATTTGAGAGT+AGG | + | chr7_2:1562993-1563012 | Msa1043350:intron | 40.0% | |
| ATCTCAGTACAATGTTGCTG+AGG | - | chr7_2:1563078-1563097 | None:intergenic | 40.0% | |
| ! | GTACTGAGATCCTCCTTTTA+CGG | + | chr7_2:1563088-1563107 | Msa1043350:intron | 40.0% |
| TTGATCAACTCCGTAAAAGG+AGG | - | chr7_2:1563101-1563120 | None:intergenic | 40.0% | |
| AGCACCAAATGTAACAGTGA+TGG | - | chr7_2:1563162-1563181 | None:intergenic | 40.0% | |
| CTCAAACAAACAACCGTTTC+AGG | + | chr7_2:1563403-1563422 | Msa1043350:intron | 40.0% | |
| TTATCACAGCACACCAGATT+TGG | + | chr7_2:1563508-1563527 | Msa1043350:intron | 40.0% | |
| ACTCTTGCCAAGAACGAAAA+GGG | - | chr7_2:1563607-1563626 | None:intergenic | 40.0% | |
| AACTCTTGCCAAGAACGAAA+AGG | - | chr7_2:1563608-1563627 | None:intergenic | 40.0% | |
| GTTCTCTTCAAGCTGAATCA+AGG | + | chr7_2:1563683-1563702 | Msa1043350:intron | 40.0% | |
| ! | AAGGCTTTTGGTAGGTTTGT+GGG | - | chr7_2:1563845-1563864 | None:intergenic | 40.0% |
| ! | AAAGGCTTTTGGTAGGTTTG+TGG | - | chr7_2:1563846-1563865 | None:intergenic | 40.0% |
| TGCACTAGCCAAATTGTTTG+AGG | + | chr7_2:1563865-1563884 | Msa1043350:intron | 40.0% | |
| !!! | GCTTTGGGAGAATTTTGGTT+TGG | - | chr7_2:1563909-1563928 | None:intergenic | 40.0% |
| !!! | TATGGGCTTTGGGAGAATTT+TGG | - | chr7_2:1563914-1563933 | None:intergenic | 40.0% |
| ! | GGTTGTTTGGGCTTTTGTAT+GGG | - | chr7_2:1563931-1563950 | None:intergenic | 40.0% |
| ! | TGGTTGTTTGGGCTTTTGTA+TGG | - | chr7_2:1563932-1563951 | None:intergenic | 40.0% |
| GGTATGTAGTCTGGTTGTTT+GGG | - | chr7_2:1563943-1563962 | None:intergenic | 40.0% | |
| TGGTATGTAGTCTGGTTGTT+TGG | - | chr7_2:1563944-1563963 | None:intergenic | 40.0% | |
| ! | GTTGGTATGAGTTTGGGTTT+GGG | - | chr7_2:1564000-1564019 | None:intergenic | 40.0% |
| ! | TGTTGGTATGAGTTTGGGTT+TGG | - | chr7_2:1564001-1564020 | None:intergenic | 40.0% |
| !!! | GTGGTAACTGGTTTTTCTGT+TGG | - | chr7_2:1564018-1564037 | None:intergenic | 40.0% |
| GGCCATCAAAAACATATCAC+CGG | + | chr7_2:1564069-1564088 | Msa1043350:intron | 40.0% | |
| !! | TGCCGGTGATATGTTTTTGA+TGG | - | chr7_2:1564074-1564093 | None:intergenic | 40.0% |
| AACATAACCCTTTATCACGG+CGG | - | chr7_2:1564108-1564127 | None:intergenic | 40.0% | |
| ! | AGCATCATTAGACGTCGATT+CGG | - | chr7_2:1564169-1564188 | None:intergenic | 40.0% |
| ! | TACGGTTTTCTTTGTCTGGT+GGG | - | chr7_2:1564231-1564250 | None:intergenic | 40.0% |
| ! | TCACTACGGTTTTCTTTGTC+TGG | - | chr7_2:1564235-1564254 | None:intergenic | 40.0% |
| AATGCGATGAAGGGAAACAA+TGG | + | chr7_2:1564292-1564311 | Msa1043350:intron | 40.0% | |
| ATGAAGGGAAACAATGGTGT+GGG | + | chr7_2:1564298-1564317 | Msa1043350:intron | 40.0% | |
| GTGGGTAAAATTCGATTCAC+AGG | + | chr7_2:1564316-1564335 | Msa1043350:intron | 40.0% | |
| ATTCGATTCACAGGACGAAT+TGG | + | chr7_2:1564325-1564344 | Msa1043350:intron | 40.0% | |
| AGGACGAATTGGAAACATAC+CGG | + | chr7_2:1564336-1564355 | Msa1043350:intron | 40.0% | |
| CCATCAACCAAAACTTGAAC+CGG | - | chr7_2:1564358-1564377 | None:intergenic | 40.0% | |
| !!! | GTTCAAGTTTTGGTTGATGG+TGG | + | chr7_2:1564358-1564377 | Msa1043350:intron | 40.0% |
| AAGCTTGGGGTAACTTCAAT+TGG | - | chr7_2:1564433-1564452 | None:intergenic | 40.0% | |
| GGACAAAGTTTAATGGTCGA+AGG | + | chr7_2:1564472-1564491 | Msa1043350:intron | 40.0% | |
| CAAAGTTTAATGGTCGAAGG+AGG | + | chr7_2:1564475-1564494 | Msa1043350:intron | 40.0% | |
| GGACTTGAAATTACAAGTCC+AGG | + | chr7_2:1564504-1564523 | Msa1043350:intron | 40.0% | |
| ATGTGATATTGGGGTCATCA+TGG | + | chr7_2:1564575-1564594 | Msa1043350:intron | 40.0% | |
| GTTGCATAATCTGCAATGTG+AGG | - | chr7_2:1564616-1564635 | None:intergenic | 40.0% | |
| !! | TGATGTAGTTGAGCTTGTTG+CGG | - | chr7_2:1564703-1564722 | None:intergenic | 40.0% |
| !! | CCGGATTTTGAAAGACTTTC+TGG | - | chr7_2:1564864-1564883 | None:intergenic | 40.0% |
| AAAGTCTTTCAAAATCCGGC+AGG | + | chr7_2:1564865-1564884 | Msa1043350:intron | 40.0% | |
| AAGTCTTTCAAAATCCGGCA+GGG | + | chr7_2:1564866-1564885 | Msa1043350:intron | 40.0% | |
| TCATGATTATGGTCTCTTGG+TGG | - | chr7_2:1564898-1564917 | None:intergenic | 40.0% | |
| GCTTCAAGAAGGAAGTAAAC+CGG | + | chr7_2:1564924-1564943 | Msa1043350:intron | 40.0% | |
| ! | TATTTGTTCCTTCTGGCTGT+GGG | - | chr7_2:1564974-1564993 | None:intergenic | 40.0% |
| AAAATAACCGGCGAAGAGAA+GGG | - | chr7_2:1565051-1565070 | None:intergenic | 40.0% | |
| TAAAATAACCGGCGAAGAGA+AGG | - | chr7_2:1565052-1565071 | None:intergenic | 40.0% | |
| TCAAGTAATTCGTCCACTGT+TGG | - | chr7_2:1565159-1565178 | None:intergenic | 40.0% | |
| GGCACAATACTTCTCAAAAC+TGG | + | chr7_2:1565191-1565210 | Msa1043350:intron | 40.0% | |
| TCAAAACTGGATTTACGACC+CGG | + | chr7_2:1565204-1565223 | Msa1043350:intron | 40.0% | |
| ATCAAAATCTGGTGATACCC+GGG | - | chr7_2:1565225-1565244 | None:intergenic | 40.0% | |
| GATCAAAATCTGGTGATACC+CGG | - | chr7_2:1565226-1565245 | None:intergenic | 40.0% | |
| !! | CTTCTGGCTTGATCAAAATC+TGG | - | chr7_2:1565236-1565255 | None:intergenic | 40.0% |
| GCCGTCTTATAACAATCTTC+TGG | - | chr7_2:1565252-1565271 | None:intergenic | 40.0% | |
| ! | GAGTGGTTAGTAATGCCTTT+TGG | + | chr7_2:1565297-1565316 | Msa1043350:intron | 40.0% |
| TGCATTGCGCAAATTTGTGT+TGG | + | chr7_2:1565374-1565393 | Msa1043350:intron | 40.0% | |
| TCTTAGTGTACAGTGAGTCA+TGG | + | chr7_2:1565412-1565431 | Msa1043350:intron | 40.0% | |
| AGTTGATTATTTGGGCCATG+TGG | + | chr7_2:1565530-1565549 | Msa1043350:intron | 40.0% | |
| GGTTTCTATGGATGCTAACA+AGG | + | chr7_2:1565566-1565585 | Msa1043350:intron | 40.0% | |
| AAGCAGCTTAGAGGATTCTT+GGG | + | chr7_2:1565627-1565646 | Msa1043350:intron | 40.0% | |
| AGAGGATTCTTGGGTTTAAC+TGG | + | chr7_2:1565636-1565655 | Msa1043350:intron | 40.0% | |
| GAGGATTCTTGGGTTTAACT+GGG | + | chr7_2:1565637-1565656 | Msa1043350:intron | 40.0% | |
| ACTAGCTATAACAGAGGCTT+TGG | + | chr7_2:1565959-1565978 | Msa1043350:intron | 40.0% | |
| CAACAAGTAATGCCTGAACT+TGG | - | chr7_2:1565985-1566004 | None:intergenic | 40.0% | |
| CAAGTTCAGGCATTACTTGT+TGG | + | chr7_2:1565983-1566002 | Msa1043350:intron | 40.0% | |
| GCGTGGCTACATAAATTCAT+TGG | + | chr7_2:1566086-1566105 | Msa1043350:intron | 40.0% | |
| CTAGAATGTTCATGTTGGCA+TGG | + | chr7_2:1566168-1566187 | Msa1043350:intron | 40.0% | |
| ACCTCAAAGCATGTTCTTAC+AGG | + | chr7_2:1566196-1566215 | Msa1043350:intron | 40.0% | |
| TCCTGTAAGAACATGCTTTG+AGG | - | chr7_2:1566200-1566219 | None:intergenic | 40.0% | |
| GGATAACATTCAGCAACAAG+GGG | + | chr7_2:1566265-1566284 | Msa1043350:intron | 40.0% | |
| GTATCAATACTGGGTTGTTG+GGG | - | chr7_2:1566352-1566371 | None:intergenic | 40.0% | |
| GTCCTCCAATATGAGATGTA+TGG | - | chr7_2:1566394-1566413 | None:intergenic | 40.0% | |
| CAGGCTCAATTCTATTGGAA+AGG | + | chr7_2:1566446-1566465 | Msa1043350:intron | 40.0% | |
| GTTGGCATATAACACAGTGT+TGG | - | chr7_2:1566499-1566518 | None:intergenic | 40.0% | |
| ACACTGTGTTATATGCCAAC+AGG | + | chr7_2:1566499-1566518 | Msa1043350:intron | 40.0% | |
| TTGTTACTGTCTTAGCCTGT+TGG | - | chr7_2:1566517-1566536 | None:intergenic | 40.0% | |
| !! | TCCCATATCTGACTTGGTAT+AGG | - | chr7_2:1566569-1566588 | None:intergenic | 40.0% |
| TATACCAAGTCAGATATGGG+AGG | + | chr7_2:1566568-1566587 | Msa1043350:intron | 40.0% | |
| ! | GCCAAATTCATTTGGGTTCA+CGG | + | chr7_2:1566619-1566638 | Msa1043350:intron | 40.0% |
| ACCGTGAACCCAAATGAATT+TGG | - | chr7_2:1566623-1566642 | None:intergenic | 40.0% | |
| ! | ATTTGGGTTCACGGTGATAA+TGG | + | chr7_2:1566628-1566647 | Msa1043350:intron | 40.0% |
| ATACTATACTAGCAAGACCG+TGG | + | chr7_2:1566700-1566719 | Msa1043350:intron | 40.0% | |
| !! | CGAAGTCAATTGTTTCTGAC+AGG | + | chr7_2:1566765-1566784 | Msa1043350:intron | 40.0% |
| ! | AGGGATAAGGTATTCACAAG+TGG | + | chr7_2:1566785-1566804 | Msa1043350:intron | 40.0% |
| ! | ACTTATTTAGGGCCTCAGAT+TGG | - | chr7_2:1566886-1566905 | None:intergenic | 40.0% |
| AGTGTCTGGAAATGTACTTG+AGG | + | chr7_2:1566903-1566922 | Msa1043350:intron | 40.0% | |
| AGTATCTTGTACCAGCTCTT+TGG | - | chr7_2:1566947-1566966 | None:intergenic | 40.0% | |
| ACAACATTCCATTCAAGTGC+AGG | + | chr7_2:1566992-1567011 | Msa1043350:intron | 40.0% | |
| ! | TGCAGGAATGACTCCTTTTA+AGG | + | chr7_2:1567009-1567028 | Msa1043350:intron | 40.0% |
| CTCCCATATAGTGCCTTAAA+AGG | - | chr7_2:1567025-1567044 | None:intergenic | 40.0% | |
| ATTGTTCCTTGACTGAAGGT+GGG | - | chr7_2:1567090-1567109 | None:intergenic | 40.0% | |
| AATTGTTCCTTGACTGAAGG+TGG | - | chr7_2:1567091-1567110 | None:intergenic | 40.0% | |
| GCTAATTGTTCCTTGACTGA+AGG | - | chr7_2:1567094-1567113 | None:intergenic | 40.0% | |
| ! | CTTTTCTTTTCTTGTCCGCT+TGG | - | chr7_2:1567183-1567202 | None:intergenic | 40.0% |
| AGCGGACAAGAAAAGAAAAG+AGG | + | chr7_2:1567183-1567202 | Msa1043350:intron | 40.0% | |
| GCGGACAAGAAAAGAAAAGA+GGG | + | chr7_2:1567184-1567203 | Msa1043350:intron | 40.0% | |
| CGGACAAGAAAAGAAAAGAG+GGG | + | chr7_2:1567185-1567204 | Msa1043350:intron | 40.0% | |
| AAGAAAAGAGGGGAACTTCA+AGG | + | chr7_2:1567195-1567214 | Msa1043350:intron | 40.0% | |
| ! | AAAGGGCCAAAGTATCTCAT+AGG | - | chr7_2:1567295-1567314 | None:intergenic | 40.0% |
| ! | TATTGAAAAGATAGGAGCGC+TGG | + | chr7_2:1567321-1567340 | Msa1043350:intron | 40.0% |
| ! | ATGGAACACTGGGTGAATTT+TGG | - | chr7_2:1567374-1567393 | None:intergenic | 40.0% |
| CCTATCTCTGTAGTAGTAAG+AGG | - | chr7_2:1567451-1567470 | None:intergenic | 40.0% | |
| CCTCTTACTACTACAGAGAT+AGG | + | chr7_2:1567448-1567467 | Msa1043350:intron | 40.0% | |
| !! | CCACAAGTGTTGATTCAATG+GGG | + | chr7_2:1567535-1567554 | Msa1043350:intron | 40.0% |
| TAAACTCAATCCTGTCCTCA+AGG | - | chr7_2:1567630-1567649 | None:intergenic | 40.0% | |
| GAGGACAGGATTGAGTTTAA+AGG | + | chr7_2:1567631-1567650 | Msa1043350:intron | 40.0% | |
| GGACAGGATTGAGTTTAAAG+GGG | + | chr7_2:1567633-1567652 | Msa1043350:intron | 40.0% | |
| GACAGGATTGAGTTTAAAGG+GGG | + | chr7_2:1567634-1567653 | Msa1043350:intron | 40.0% | |
| TTATGAAAGAAGGGCCTAGA+AGG | + | chr7_2:1562875-1562894 | Msa1043350:intron | 40.0% | |
| GCTAAGTCATCATTCCTTCT+AGG | - | chr7_2:1567682-1567701 | None:intergenic | 40.0% | |
| AGAAGGAATGATGACTTAGC+AGG | + | chr7_2:1567682-1567701 | Msa1043350:intron | 40.0% | |
| TGTACTTAACACTAGGCTCA+AGG | + | chr7_2:1562957-1562976 | Msa1043350:intron | 40.0% | |
| GTACTTAACACTAGGCTCAA+GGG | + | chr7_2:1562958-1562977 | Msa1043350:intron | 40.0% | |
| AGGCTCAAGGGTTATAAAGT+AGG | + | chr7_2:1562970-1562989 | Msa1043350:intron | 40.0% | |
| GGTTATAAAGTAGGCATGTG+AGG | + | chr7_2:1562979-1562998 | Msa1043350:intron | 40.0% | |
| CATGTGAGGAATTTGAGAGT+AGG | + | chr7_2:1562993-1563012 | Msa1043350:intron | 40.0% | |
| ATCTCAGTACAATGTTGCTG+AGG | - | chr7_2:1563078-1563097 | None:intergenic | 40.0% | |
| ! | GTACTGAGATCCTCCTTTTA+CGG | + | chr7_2:1563088-1563107 | Msa1043350:intron | 40.0% |
| TTGATCAACTCCGTAAAAGG+AGG | - | chr7_2:1563101-1563120 | None:intergenic | 40.0% | |
| TTACATGGACTCTGCTAGTA+AGG | + | chr7_2:1567958-1567977 | Msa1043350:intron | 40.0% | |
| ATGTGGCTTCAGAAGTTCAT+GGG | + | chr7_2:1568008-1568027 | Msa1043350:intron | 40.0% | |
| CTTCAGAGAATGTTCCATCA+AGG | + | chr7_2:1568613-1568632 | Msa1043350:CDS | 40.0% | |
| ATGTTCCATCAAGGATAAGC+AGG | + | chr7_2:1568622-1568641 | Msa1043350:CDS | 40.0% | |
| GGATAAGCAGGTGAGAAAAT+TGG | + | chr7_2:1568634-1568653 | Msa1043350:intron | 40.0% | |
| ! | CTGATTGTTGAACTGGTTTC+AGG | - | chr7_2:1568840-1568859 | None:intergenic | 40.0% |
| GCTGAGTCATCATTCCTTCT+AGG | - | chr7_2:1562892-1562911 | None:intergenic | 45.0% | |
| AGAAGGAATGATGACTCAGC+AGG | + | chr7_2:1562892-1562911 | Msa1043350:intron | 45.0% | |
| GCAGGCCCAACTAATTTAGA+AGG | + | chr7_2:1562910-1562929 | Msa1043350:intron | 45.0% | |
| GGACACGTGTACTTAACACT+AGG | + | chr7_2:1562950-1562969 | Msa1043350:intron | 45.0% | |
| ACTGTGCTTGCATCTCTGTT+TGG | - | chr7_2:1563271-1563290 | None:intergenic | 45.0% | |
| ATTGAAACGCTCGGAGTTTG+TGG | - | chr7_2:1563309-1563328 | None:intergenic | 45.0% | |
| ! | CAGTGGAGTTTGTTTGCTTC+AGG | - | chr7_2:1563361-1563380 | None:intergenic | 45.0% |
| ! | GTTTGAGTTCGTTGCACCAT+GGG | - | chr7_2:1563390-1563409 | None:intergenic | 45.0% |
| ! | TGTTTGAGTTCGTTGCACCA+TGG | - | chr7_2:1563391-1563410 | None:intergenic | 45.0% |
| ACGTTCTTTCCATCGAATCG+CGG | - | chr7_2:1563452-1563471 | None:intergenic | 45.0% | |
| ! | GTTCACACCCTTTTCGTTCT+TGG | + | chr7_2:1563597-1563616 | Msa1043350:intron | 45.0% |
| !! | CGAGCATTGGAACTCGATTT+CGG | + | chr7_2:1563632-1563651 | Msa1043350:intron | 45.0% |
| GCTTGAAGAGAACTGCTCTT+GGG | - | chr7_2:1563676-1563695 | None:intergenic | 45.0% | |
| AGCTTGAAGAGAACTGCTCT+TGG | - | chr7_2:1563677-1563696 | None:intergenic | 45.0% | |
| CTCTTCAAGCTGAATCAAGG+AGG | + | chr7_2:1563686-1563705 | Msa1043350:intron | 45.0% | |
| CAAGCTGAATCAAGGAGGTA+CGG | + | chr7_2:1563691-1563710 | Msa1043350:intron | 45.0% | |
| !! | GCACTGGCTAATAGAGTCTA+TGG | + | chr7_2:1563740-1563759 | Msa1043350:intron | 45.0% |
| TGGTAGGTTTGTGGGAGAAA+GGG | - | chr7_2:1563837-1563856 | None:intergenic | 45.0% | |
| TTGGTAGGTTTGTGGGAGAA+AGG | - | chr7_2:1563838-1563857 | None:intergenic | 45.0% | |
| ! | CTAGTGCAAAGGCTTTTGGT+AGG | - | chr7_2:1563853-1563872 | None:intergenic | 45.0% |
| ! | TTGGCTAGTGCAAAGGCTTT+TGG | - | chr7_2:1563857-1563876 | None:intergenic | 45.0% |
| !!! | GGAGAATTTTGGTTTGGGCT+GGG | - | chr7_2:1563903-1563922 | None:intergenic | 45.0% |
| ! | TGGGCTTTTGTATGGGCTTT+GGG | - | chr7_2:1563924-1563943 | None:intergenic | 45.0% |
| ! | TTGGGCTTTTGTATGGGCTT+TGG | - | chr7_2:1563925-1563944 | None:intergenic | 45.0% |
| ! | GTATGAGTTTGGGTTTGGGT+CGG | - | chr7_2:1563996-1564015 | None:intergenic | 45.0% |
| ! | TGATTTGGAGTGGGTAACAG+TGG | - | chr7_2:1564040-1564059 | None:intergenic | 45.0% |
| ATGCAAATCCGCCGTGATAA+AGG | + | chr7_2:1564097-1564116 | Msa1043350:intron | 45.0% | |
| TGCAAATCCGCCGTGATAAA+GGG | + | chr7_2:1564098-1564117 | Msa1043350:intron | 45.0% | |
| !! | TTAGACGTCGATTCGGACAA+CGG | - | chr7_2:1564162-1564181 | None:intergenic | 45.0% |
| !! | TTTTCTTTGTCTGGTGGGTC+GGG | - | chr7_2:1564226-1564245 | None:intergenic | 45.0% |
| !! | GTTTTCTTTGTCTGGTGGGT+CGG | - | chr7_2:1564227-1564246 | None:intergenic | 45.0% |
| ! | CTACGGTTTTCTTTGTCTGG+TGG | - | chr7_2:1564232-1564251 | None:intergenic | 45.0% |
| CTTCTTCTTCAGCGTCACTA+CGG | - | chr7_2:1564249-1564268 | None:intergenic | 45.0% | |
| GATGAAGGGAAACAATGGTG+TGG | + | chr7_2:1564297-1564316 | Msa1043350:intron | 45.0% | |
| !!! | CCGGTTCAAGTTTTGGTTGA+TGG | + | chr7_2:1564355-1564374 | Msa1043350:intron | 45.0% |
| ! | TTCCAAGTTCTGGTGGGAAA+TGG | + | chr7_2:1564451-1564470 | Msa1043350:intron | 45.0% |
| TAATGGTCGAAGGAGGAGTT+AGG | + | chr7_2:1564482-1564501 | Msa1043350:intron | 45.0% | |
| AATGGTCGAAGGAGGAGTTA+GGG | + | chr7_2:1564483-1564502 | Msa1043350:intron | 45.0% | |
| GCCGATGCAGATGTGATATT+GGG | + | chr7_2:1564565-1564584 | Msa1043350:intron | 45.0% | |
| CCCCAATATCACATCTGCAT+CGG | - | chr7_2:1564569-1564588 | None:intergenic | 45.0% | |
| CCGATGCAGATGTGATATTG+GGG | + | chr7_2:1564566-1564585 | Msa1043350:intron | 45.0% | |
| TCATCATGGCTAGCAACTCT+TGG | + | chr7_2:1564589-1564608 | Msa1043350:intron | 45.0% | |
| TGATTATGGTCTCTTGGTGG+TGG | - | chr7_2:1564895-1564914 | None:intergenic | 45.0% | |
| CGATAGGGCTTAACTTTGAC+CGG | - | chr7_2:1564946-1564965 | None:intergenic | 45.0% | |
| ! | ATTTGTTCCTTCTGGCTGTG+GGG | - | chr7_2:1564973-1564992 | None:intergenic | 45.0% |
| ! | CTATTTGTTCCTTCTGGCTG+TGG | - | chr7_2:1564975-1564994 | None:intergenic | 45.0% |
| GTGCATGAAATGCTTGAGCA+AGG | + | chr7_2:1565003-1565022 | Msa1043350:intron | 45.0% | |
| AATTCGTCCACTGTTGGCAT+GGG | - | chr7_2:1565153-1565172 | None:intergenic | 45.0% | |
| TAATTCGTCCACTGTTGGCA+TGG | - | chr7_2:1565154-1565173 | None:intergenic | 45.0% | |
| CAAAACTGGATTTACGACCC+GGG | + | chr7_2:1565205-1565224 | Msa1043350:intron | 45.0% | |
| ! | GGTGCACTTGTTAACCCAAA+AGG | - | chr7_2:1565315-1565334 | None:intergenic | 45.0% |
| !! | GTCTGGTAATGGGGTTTCTA+TGG | + | chr7_2:1565554-1565573 | Msa1043350:intron | 45.0% |
| GAAGCAGCTTAGAGGATTCT+TGG | + | chr7_2:1565626-1565645 | Msa1043350:intron | 45.0% | |
| ATCACCACAACACCAGTTCT+AGG | + | chr7_2:1565783-1565802 | Msa1043350:intron | 45.0% | |
| ! | CAAACCTAGAACTGGTGTTG+TGG | - | chr7_2:1565790-1565809 | None:intergenic | 45.0% |
| !! | AACACCAGTTCTAGGTTTGC+CGG | + | chr7_2:1565791-1565810 | Msa1043350:intron | 45.0% |
| AAATCCGGCAAACCTAGAAC+TGG | - | chr7_2:1565798-1565817 | None:intergenic | 45.0% | |
| GCATCTGTCTCGAGTGTAAA+TGG | - | chr7_2:1565828-1565847 | None:intergenic | 45.0% | |
| AAACTTCAGAACAACAGGCG+TGG | + | chr7_2:1566069-1566088 | Msa1043350:intron | 45.0% | |
| ACCAGGCAAAGACAACATTC+CGG | + | chr7_2:1566133-1566152 | Msa1043350:intron | 45.0% | |
| ! | CACTACAAGAAGCACAGGAA+TGG | + | chr7_2:1566231-1566250 | Msa1043350:intron | 45.0% |
| ACAGGAATGGAGATCTGTGA+TGG | + | chr7_2:1566244-1566263 | Msa1043350:intron | 45.0% | |
| AACAAGGGGCAACGGATAAT+GGG | + | chr7_2:1566279-1566298 | Msa1043350:intron | 45.0% | |
| TCTCATATTGGAGGACATGC+TGG | + | chr7_2:1566398-1566417 | Msa1043350:intron | 45.0% | |
| GCGTTCAGGCTCAATTCTAT+TGG | + | chr7_2:1566441-1566460 | Msa1043350:intron | 45.0% | |
| ACATCCTCCCATATCTGACT+TGG | - | chr7_2:1566575-1566594 | None:intergenic | 45.0% | |
| GATATGGGAGGATGTAGCAA+TGG | + | chr7_2:1566580-1566599 | Msa1043350:intron | 45.0% | |
| CAACATGAAAGCTTCAGCCA+CGG | - | chr7_2:1566720-1566739 | None:intergenic | 45.0% | |
| ! | TCAGATTGGCCATCTGTTTG+GGG | - | chr7_2:1566872-1566891 | None:intergenic | 45.0% |
| ! | CTCAGATTGGCCATCTGTTT+GGG | - | chr7_2:1566873-1566892 | None:intergenic | 45.0% |
| TGAGGCCCTAAATAAGTGTC+TGG | + | chr7_2:1566889-1566908 | Msa1043350:intron | 45.0% | |
| CTTTCCAACATCCAAAGAGC+TGG | + | chr7_2:1566933-1566952 | Msa1043350:intron | 45.0% | |
| TGTACCAGCTCTTTGGATGT+TGG | - | chr7_2:1566940-1566959 | None:intergenic | 45.0% | |
| GAGTCATTCCTGCACTTGAA+TGG | - | chr7_2:1567003-1567022 | None:intergenic | 45.0% | |
| ACATACCTGATTAACGCTGG+AGG | - | chr7_2:1567052-1567071 | None:intergenic | 45.0% | |
| GCAACATACCTGATTAACGC+TGG | - | chr7_2:1567055-1567074 | None:intergenic | 45.0% | |
| AAATGACCCACCTTCAGTCA+AGG | + | chr7_2:1567081-1567100 | Msa1043350:intron | 45.0% | |
| AAAGAGGGGAACTTCAAGGT+AGG | + | chr7_2:1567199-1567218 | Msa1043350:intron | 45.0% | |
| GAACTTCAAGGTAGGAGACA+AGG | + | chr7_2:1567207-1567226 | Msa1043350:intron | 45.0% | |
| GCAGCTGAATGTTGTCTGTA+TGG | - | chr7_2:1567250-1567269 | None:intergenic | 45.0% | |
| !! | GGGTGAATTTTGGCAGTGAT+GGG | - | chr7_2:1567364-1567383 | None:intergenic | 45.0% |
| !! | TGGGTGAATTTTGGCAGTGA+TGG | - | chr7_2:1567365-1567384 | None:intergenic | 45.0% |
| ACTGCGAGATATGGAACACT+GGG | - | chr7_2:1567384-1567403 | None:intergenic | 45.0% | |
| AACTGCGAGATATGGAACAC+TGG | - | chr7_2:1567385-1567404 | None:intergenic | 45.0% | |
| GTAAGAGGCAGCGGTATATA+AGG | - | chr7_2:1567436-1567455 | None:intergenic | 45.0% | |
| TCTGTAGTAGTAAGAGGCAG+CGG | - | chr7_2:1567445-1567464 | None:intergenic | 45.0% | |
| TACAGAGATAGGCCCAATGA+TGG | + | chr7_2:1567459-1567478 | Msa1043350:intron | 45.0% | |
| CCCCATTGAATCAACACTTG+TGG | - | chr7_2:1567538-1567557 | None:intergenic | 45.0% | |
| !! | AGTGTTGATTCAATGGGGAG+AGG | + | chr7_2:1567540-1567559 | Msa1043350:intron | 45.0% |
| GCAGGCCCAACTAATTTAGA+AGG | + | chr7_2:1562910-1562929 | Msa1043350:intron | 45.0% | |
| GGACACGTGTACTTAACACT+AGG | + | chr7_2:1562950-1562969 | Msa1043350:intron | 45.0% | |
| CAGAGTCCATGTAACAGTGA+TGG | - | chr7_2:1567952-1567971 | None:intergenic | 45.0% | |
| !! | TCTTGGTTTGGTTGAGGATG+TGG | + | chr7_2:1567991-1568010 | Msa1043350:intron | 45.0% |
| GATGTGGCTTCAGAAGTTCA+TGG | + | chr7_2:1568007-1568026 | Msa1043350:intron | 45.0% | |
| TGTGGCTTCAGAAGTTCATG+GGG | + | chr7_2:1568009-1568028 | Msa1043350:intron | 45.0% | |
| TATTGTATGCCAGGGATGAC+TGG | + | chr7_2:1568157-1568176 | Msa1043350:CDS | 45.0% | |
| TCTCACCTGCTTATCCTTGA+TGG | - | chr7_2:1568630-1568649 | None:intergenic | 45.0% | |
| TGGTGCTTTCACTACCACCA+TGG | + | chr7_2:1563175-1563194 | Msa1043350:intron | 50.0% | |
| TCTCATACCTTCGTCTGCCA+TGG | - | chr7_2:1563195-1563214 | None:intergenic | 50.0% | |
| CAGAGATGCAAGCACAGTTC+CGG | + | chr7_2:1563273-1563292 | Msa1043350:intron | 50.0% | |
| AACTCCACTGAGTCTTCCCA+TGG | + | chr7_2:1563371-1563390 | Msa1043350:intron | 50.0% | |
| ! | CTCGATTTTCCGCGATTCGA+TGG | + | chr7_2:1563440-1563459 | Msa1043350:intron | 50.0% |
| AGTTCACTTGGATCACGACG+TGG | + | chr7_2:1563550-1563569 | Msa1043350:intron | 50.0% | |
| !! | CGCTGGTTCATTTGGAACCA+TGG | - | chr7_2:1563578-1563597 | None:intergenic | 50.0% |
| !! | GGTGTGAACGCTGGTTCATT+TGG | - | chr7_2:1563586-1563605 | None:intergenic | 50.0% |
| ! | AACGAAAAGGGTGTGAACGC+TGG | - | chr7_2:1563595-1563614 | None:intergenic | 50.0% |
| GCAAGAGTTTACGCGAGCAT+TGG | + | chr7_2:1563619-1563638 | Msa1043350:intron | 50.0% | |
| !!! | GGGAGAATTTTGGTTTGGGC+TGG | - | chr7_2:1563904-1563923 | None:intergenic | 50.0% |
| GGGTCGGATCTGTGAGTATT+TGG | - | chr7_2:1563980-1563999 | None:intergenic | 50.0% | |
| TGGGTAACAGTGGTGGTAAC+TGG | - | chr7_2:1564030-1564049 | None:intergenic | 50.0% | |
| ! | TTTGGAGTGGGTAACAGTGG+TGG | - | chr7_2:1564037-1564056 | None:intergenic | 50.0% |
| TACCCCAAGCTTCCAAGTTC+TGG | + | chr7_2:1564441-1564460 | Msa1043350:intron | 50.0% | |
| CACCAGAACTTGGAAGCTTG+GGG | - | chr7_2:1564446-1564465 | None:intergenic | 50.0% | |
| CCACCAGAACTTGGAAGCTT+GGG | - | chr7_2:1564447-1564466 | None:intergenic | 50.0% | |
| ! | CCAAGCTTCCAAGTTCTGGT+GGG | + | chr7_2:1564445-1564464 | Msa1043350:intron | 50.0% |
| GTCCATTTCCCACCAGAACT+TGG | - | chr7_2:1564456-1564475 | None:intergenic | 50.0% | |
| TCTGGCGTACTTGTTTCCGT+TGG | + | chr7_2:1564543-1564562 | Msa1043350:intron | 50.0% | |
| ! | ATCACATCTGCATCGGCCAA+CGG | - | chr7_2:1564562-1564581 | None:intergenic | 50.0% |
| GGCCGATGCAGATGTGATAT+TGG | + | chr7_2:1564564-1564583 | Msa1043350:intron | 50.0% | |
| AACTCCTGCAGCTGATCTTG+TGG | - | chr7_2:1564796-1564815 | None:intergenic | 50.0% | |
| TGCAGCAGTAGTGCCAATTC+TGG | - | chr7_2:1564835-1564854 | None:intergenic | 50.0% | |
| ! | TTTGTTCCTTCTGGCTGTGG+GGG | - | chr7_2:1564972-1564991 | None:intergenic | 50.0% |
| GAAGAGAAGGGACTGTTGCT+TGG | - | chr7_2:1565039-1565058 | None:intergenic | 50.0% | |
| ATTCGTCCACTGTTGGCATG+GGG | - | chr7_2:1565152-1565171 | None:intergenic | 50.0% | |
| ! | ACGGCTTTTCGCACTCATCA+CGG | + | chr7_2:1565267-1565286 | Msa1043350:intron | 50.0% |
| TATTTGGGCCATGTGGTGTC+TGG | + | chr7_2:1565537-1565556 | Msa1043350:intron | 50.0% | |
| GCCATGTGGTGTCTGGTAAT+GGG | + | chr7_2:1565544-1565563 | Msa1043350:intron | 50.0% | |
| ! | CCATGTGGTGTCTGGTAATG+GGG | + | chr7_2:1565545-1565564 | Msa1043350:intron | 50.0% |
| AGAGCATATGCGCAGATTGC+AGG | + | chr7_2:1565678-1565697 | Msa1043350:intron | 50.0% | |
| GAGCATATGCGCAGATTGCA+GGG | + | chr7_2:1565679-1565698 | Msa1043350:intron | 50.0% | |
| TGGTGATTGCATGCTTGAGC+TGG | - | chr7_2:1565770-1565789 | None:intergenic | 50.0% | |
| ACACTCGAGACAGATGCATC+AGG | + | chr7_2:1565831-1565850 | Msa1043350:intron | 50.0% | |
| GAGACAGATGCATCAGGTAC+AGG | + | chr7_2:1565837-1565856 | Msa1043350:intron | 50.0% | |
| AGATGCATCAGGTACAGGAG+TGG | + | chr7_2:1565842-1565861 | Msa1043350:intron | 50.0% | |
| GATGCATCAGGTACAGGAGT+GGG | + | chr7_2:1565843-1565862 | Msa1043350:intron | 50.0% | |
| ! | GGAGCAGTGTTGGGACAAAA+TGG | + | chr7_2:1565864-1565883 | Msa1043350:intron | 50.0% |
| ! | GAGTGCACTACAAGAAGCAC+AGG | + | chr7_2:1566226-1566245 | Msa1043350:intron | 50.0% |
| CATTCAGCAACAAGGGGCAA+CGG | + | chr7_2:1566271-1566290 | Msa1043350:intron | 50.0% | |
| CAACAAGGGGCAACGGATAA+TGG | + | chr7_2:1566278-1566297 | Msa1043350:intron | 50.0% | |
| CAGAACTTTAGCACGCGTTC+AGG | + | chr7_2:1566427-1566446 | Msa1043350:intron | 50.0% | |
| !! | TGGGTTCACGGTGATAATGG+TGG | + | chr7_2:1566631-1566650 | Msa1043350:intron | 50.0% |
| GCATATCACCCCCAAACAGA+TGG | + | chr7_2:1566860-1566879 | Msa1043350:intron | 50.0% | |
| ! | CAGATTGGCCATCTGTTTGG+GGG | - | chr7_2:1566871-1566890 | None:intergenic | 50.0% |
| ! | CCTCAGATTGGCCATCTGTT+TGG | - | chr7_2:1566874-1566893 | None:intergenic | 50.0% |
| CCAAACAGATGGCCAATCTG+AGG | + | chr7_2:1566871-1566890 | Msa1043350:intron | 50.0% | |
| GAGATCCTCCAGCGTTAATC+AGG | + | chr7_2:1567044-1567063 | Msa1043350:intron | 50.0% | |
| CAAGGTAGGAGACAAGGTTC+TGG | + | chr7_2:1567213-1567232 | Msa1043350:intron | 50.0% | |
| ! | AGGCCCAATGATGGAACCAA+CGG | + | chr7_2:1567468-1567487 | Msa1043350:intron | 50.0% |
| !! | CAGCCGTTGGTTCCATCATT+GGG | - | chr7_2:1567474-1567493 | None:intergenic | 50.0% |
| !! | ACAGCCGTTGGTTCCATCAT+TGG | - | chr7_2:1567475-1567494 | None:intergenic | 50.0% |
| GGCTGTGCTGGATTCAAGAA+TGG | + | chr7_2:1567489-1567508 | Msa1043350:intron | 50.0% | |
| TTACCCGGAGTTCAACCTTG+AGG | + | chr7_2:1567612-1567631 | Msa1043350:intron | 50.0% | |
| TGTCCTCAAGGTTGAACTCC+GGG | - | chr7_2:1567618-1567637 | None:intergenic | 50.0% | |
| CTGTCCTCAAGGTTGAACTC+CGG | - | chr7_2:1567619-1567638 | None:intergenic | 50.0% | |
| AGATCATAGCCAGTCATCCC+TGG | - | chr7_2:1568169-1568188 | None:intergenic | 50.0% | |
| ACTACCACCATGGCAGACGA+AGG | + | chr7_2:1563185-1563204 | Msa1043350:intron | 55.0% | |
| CATACCTTCGTCTGCCATGG+TGG | - | chr7_2:1563192-1563211 | None:intergenic | 55.0% | |
| CAATAGCTGCAGCATTGCGC+TGG | - | chr7_2:1563241-1563260 | None:intergenic | 55.0% | |
| AGTTTGTGGCTTCAGCACGC+CGG | - | chr7_2:1563295-1563314 | None:intergenic | 55.0% | |
| TGCACCATGGGAAGACTCAG+TGG | - | chr7_2:1563378-1563397 | None:intergenic | 55.0% | |
| TGGATCACGACGTGGTTCCA+TGG | + | chr7_2:1563558-1563577 | Msa1043350:intron | 55.0% | |
| GGAACTCGATTTCGGTCCGT+CGG | + | chr7_2:1563640-1563659 | Msa1043350:intron | 55.0% | |
| CTTGGGCATTCATACGCCGA+CGG | - | chr7_2:1563659-1563678 | None:intergenic | 55.0% | |
| ! | TTTGTCTGGTGGGTCGGGTT+CGG | - | chr7_2:1564221-1564240 | None:intergenic | 55.0% |
| ! | CCCAAGCTTCCAAGTTCTGG+TGG | + | chr7_2:1564444-1564463 | Msa1043350:intron | 55.0% |
| CCCACCAGAACTTGGAAGCT+TGG | - | chr7_2:1564448-1564467 | None:intergenic | 55.0% | |
| TGGCTGTGGGGGTAACGATA+GGG | - | chr7_2:1564961-1564980 | None:intergenic | 55.0% | |
| CAACAGTCCCTTCTCTTCGC+CGG | + | chr7_2:1565041-1565060 | Msa1043350:intron | 55.0% | |
| CAGTTTCCCCATGCCAACAG+TGG | + | chr7_2:1565143-1565162 | Msa1043350:intron | 55.0% | |
| ! | CGGCTTTTCGCACTCATCAC+GGG | + | chr7_2:1565268-1565287 | Msa1043350:intron | 55.0% |
| GGCCATGTGGTGTCTGGTAA+TGG | + | chr7_2:1565543-1565562 | Msa1043350:intron | 55.0% | |
| CCCCATTACCAGACACCACA+TGG | - | chr7_2:1565548-1565567 | None:intergenic | 55.0% | |
| TACAGGAGTGGGAGCAGTGT+TGG | + | chr7_2:1565854-1565873 | Msa1043350:intron | 55.0% | |
| ACAGGAGTGGGAGCAGTGTT+GGG | + | chr7_2:1565855-1565874 | Msa1043350:intron | 55.0% | |
| ! | CAGAGGCTTTGGCCAAGTTC+AGG | + | chr7_2:1565970-1565989 | Msa1043350:intron | 55.0% |
| GCCGGAATGTTGTCTTTGCC+TGG | - | chr7_2:1566137-1566156 | None:intergenic | 55.0% | |
| AGAGGCTGCAATAGCCCAGT+TGG | - | chr7_2:1566545-1566564 | None:intergenic | 55.0% | |
| CTTGAATCCAGCACAGCCGT+TGG | - | chr7_2:1567487-1567506 | None:intergenic | 55.0% | |
| GGGAGAGGAAGCAAAGTCAG+AGG | + | chr7_2:1567555-1567574 | Msa1043350:intron | 55.0% | |
| AGGAAGCAAAGTCAGAGGCG+AGG | + | chr7_2:1567560-1567579 | Msa1043350:intron | 55.0% | |
| AAGCAAAGTCAGAGGCGAGG+TGG | + | chr7_2:1567563-1567582 | Msa1043350:intron | 55.0% | |
| AGCAAAGTCAGAGGCGAGGT+GGG | + | chr7_2:1567564-1567583 | Msa1043350:intron | 55.0% | |
| CGGAGTTCAACCTTGAGGAC+AGG | + | chr7_2:1567617-1567636 | Msa1043350:intron | 55.0% | |
| ! | CGGCGGATTTGCATCTCTGC+CGG | - | chr7_2:1564091-1564110 | None:intergenic | 60.0% |
| GCGACCACAAGATCAGCTGC+AGG | + | chr7_2:1564789-1564808 | Msa1043350:intron | 60.0% | |
| CTGGCTGTGGGGGTAACGAT+AGG | - | chr7_2:1564962-1564981 | None:intergenic | 60.0% | |
| TCGTTACCCCCACAGCCAGA+AGG | + | chr7_2:1564963-1564982 | Msa1043350:intron | 60.0% | |
| CTCATCACGGGCACTACGAG+TGG | + | chr7_2:1565280-1565299 | Msa1043350:intron | 60.0% | |
| GATGGAACCAACGGCTGTGC+TGG | + | chr7_2:1567477-1567496 | Msa1043350:intron | 60.0% | |
| AAAGTCAGAGGCGAGGTGGG+AGG | + | chr7_2:1567567-1567586 | Msa1043350:intron | 60.0% | |
| !! | CTTGGTGGTGGCAGCCCTGC+CGG | - | chr7_2:1564883-1564902 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 1562565 | 1568936 | 1562565 | ID=Msa1043350;Name=Msa1043350 |
| chr7_2 | mRNA | 1562565 | 1568936 | 1562565 | ID=Msa1043350-mRNA-1;Parent=Msa1043350;Name=Msa1043350-mRNA-1;_AED=0.20;_eAED=0.21;_QI=0|0|0|1|0.75|0.8|5|0|129 |
| chr7_2 | exon | 1562565 | 1562667 | 1562565 | ID=Msa1043350-mRNA-1:exon:240;Parent=Msa1043350-mRNA-1 |
| chr7_2 | exon | 1568023 | 1568030 | 1568023 | ID=Msa1043350-mRNA-1:exon:241;Parent=Msa1043350-mRNA-1 |
| chr7_2 | exon | 1568127 | 1568204 | 1568127 | ID=Msa1043350-mRNA-1:exon:242;Parent=Msa1043350-mRNA-1 |
| chr7_2 | exon | 1568573 | 1568643 | 1568573 | ID=Msa1043350-mRNA-1:exon:243;Parent=Msa1043350-mRNA-1 |
| chr7_2 | exon | 1568807 | 1568936 | 1568807 | ID=Msa1043350-mRNA-1:exon:244;Parent=Msa1043350-mRNA-1 |
| chr7_2 | CDS | 1562565 | 1562667 | 1562565 | ID=Msa1043350-mRNA-1:cds;Parent=Msa1043350-mRNA-1 |
| chr7_2 | CDS | 1568023 | 1568030 | 1568023 | ID=Msa1043350-mRNA-1:cds;Parent=Msa1043350-mRNA-1 |
| chr7_2 | CDS | 1568127 | 1568204 | 1568127 | ID=Msa1043350-mRNA-1:cds;Parent=Msa1043350-mRNA-1 |
| chr7_2 | CDS | 1568573 | 1568643 | 1568573 | ID=Msa1043350-mRNA-1:cds;Parent=Msa1043350-mRNA-1 |
| chr7_2 | CDS | 1568807 | 1568936 | 1568807 | ID=Msa1043350-mRNA-1:cds;Parent=Msa1043350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
