Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044030 | AES95624.2 | 69.925 | 266 | 32 | 8 | 4 | 258 | 1 | 229 | 2.63e-99 | 299 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044030 | sp|Q8S9H7|DIV_ANTMA | 54.286 | 70 | 26 | 2 | 125 | 191 | 140 | 206 | 6.64e-15 | 76.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044030 | G7K884 | 69.925 | 266 | 32 | 8 | 4 | 258 | 1 | 229 | 1.26e-99 | 299 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1044030 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044030 | MtrunA17_Chr5g0409831 | 69.925 | 266 | 32 | 8 | 4 | 258 | 1 | 229 | 2.42e-103 | 299 |
| Msa1044030 | MtrunA17_Chr5g0409841 | 51.493 | 268 | 80 | 11 | 4 | 258 | 1 | 231 | 9.32e-72 | 219 |
| Msa1044030 | MtrunA17_Chr5g0440731 | 45.955 | 309 | 84 | 10 | 3 | 258 | 16 | 294 | 7.94e-69 | 214 |
| Msa1044030 | MtrunA17_Chr5g0440741 | 44.839 | 310 | 81 | 10 | 3 | 258 | 16 | 289 | 1.42e-64 | 203 |
| Msa1044030 | MtrunA17_Chr7g0241761 | 54.688 | 64 | 26 | 1 | 125 | 188 | 148 | 208 | 1.14e-16 | 78.2 |
| Msa1044030 | MtrunA17_Chr1g0210471 | 38.679 | 106 | 55 | 3 | 127 | 226 | 134 | 235 | 2.79e-16 | 75.9 |
| Msa1044030 | MtrunA17_Chr1g0162081 | 52.941 | 68 | 29 | 1 | 127 | 194 | 132 | 196 | 3.32e-16 | 76.6 |
| Msa1044030 | MtrunA17_Chr8g0364731 | 49.275 | 69 | 34 | 1 | 124 | 192 | 8 | 75 | 4.87e-16 | 73.9 |
| Msa1044030 | MtrunA17_Chr3g0104071 | 56.250 | 64 | 25 | 1 | 125 | 188 | 155 | 215 | 6.94e-16 | 75.9 |
| Msa1044030 | MtrunA17_Chr5g0429521 | 56.250 | 64 | 25 | 1 | 125 | 188 | 140 | 200 | 7.46e-16 | 75.9 |
| Msa1044030 | MtrunA17_Chr5g0436501 | 37.121 | 132 | 68 | 5 | 125 | 243 | 133 | 262 | 5.18e-15 | 72.8 |
| Msa1044030 | MtrunA17_Chr2g0331031 | 36.559 | 93 | 56 | 1 | 127 | 219 | 119 | 208 | 1.41e-14 | 72.4 |
| Msa1044030 | MtrunA17_Chr4g0062741 | 48.529 | 68 | 32 | 1 | 127 | 194 | 148 | 212 | 2.00e-14 | 71.6 |
| Msa1044030 | MtrunA17_Chr8g0365011 | 53.030 | 66 | 30 | 1 | 127 | 192 | 114 | 178 | 2.99e-14 | 70.9 |
| Msa1044030 | MtrunA17_Chr3g0135671 | 46.552 | 58 | 31 | 0 | 127 | 184 | 101 | 158 | 2.60e-13 | 67.4 |
| Msa1044030 | MtrunA17_Chr6g0488471 | 50.000 | 60 | 27 | 1 | 125 | 184 | 105 | 161 | 3.27e-13 | 68.2 |
| Msa1044030 | MtrunA17_Chr8g0389241 | 51.724 | 58 | 24 | 1 | 127 | 184 | 115 | 168 | 3.03e-12 | 65.1 |
| Msa1044030 | MtrunA17_Chr4g0059701 | 31.515 | 165 | 74 | 6 | 93 | 244 | 47 | 185 | 4.85e-12 | 64.7 |
| Msa1044030 | MtrunA17_Chr4g0055931 | 38.571 | 70 | 40 | 1 | 127 | 196 | 105 | 171 | 1.21e-11 | 63.9 |
| Msa1044030 | MtrunA17_Chr1g0192061 | 44.615 | 65 | 35 | 1 | 127 | 191 | 71 | 134 | 6.35e-11 | 60.1 |
| Msa1044030 | MtrunA17_Chr5g0415191 | 46.377 | 69 | 31 | 2 | 125 | 193 | 110 | 172 | 6.69e-11 | 61.6 |
| Msa1044030 | MtrunA17_Chr5g0432921 | 39.759 | 83 | 45 | 2 | 127 | 209 | 123 | 200 | 6.76e-11 | 60.5 |
| Msa1044030 | MtrunA17_Chr3g0113121 | 49.206 | 63 | 28 | 1 | 127 | 185 | 105 | 167 | 7.37e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044030 | AT5G23650.1 | 43.636 | 110 | 54 | 3 | 125 | 234 | 128 | 229 | 1.06e-16 | 79.0 |
| Msa1044030 | AT5G58900.1 | 56.250 | 64 | 25 | 1 | 125 | 188 | 149 | 209 | 1.44e-16 | 77.8 |
| Msa1044030 | AT5G01200.1 | 58.065 | 62 | 23 | 1 | 127 | 188 | 156 | 214 | 1.72e-16 | 77.4 |
| Msa1044030 | AT2G38090.1 | 53.125 | 64 | 27 | 1 | 125 | 188 | 149 | 209 | 5.48e-16 | 76.3 |
| Msa1044030 | AT5G04760.1 | 50.000 | 72 | 31 | 2 | 125 | 196 | 107 | 173 | 2.55e-15 | 73.2 |
| Msa1044030 | AT5G08520.1 | 51.471 | 68 | 30 | 1 | 127 | 194 | 128 | 192 | 2.73e-15 | 74.3 |
| Msa1044030 | AT3G10580.2 | 49.296 | 71 | 30 | 2 | 127 | 197 | 105 | 169 | 7.41e-15 | 72.4 |
| Msa1044030 | AT3G10580.1 | 49.296 | 71 | 30 | 2 | 127 | 197 | 105 | 169 | 9.12e-15 | 72.8 |
| Msa1044030 | AT3G11280.2 | 46.914 | 81 | 36 | 2 | 112 | 188 | 118 | 195 | 3.46e-14 | 70.9 |
| Msa1044030 | AT3G11280.1 | 46.914 | 81 | 36 | 2 | 112 | 188 | 118 | 195 | 3.46e-14 | 70.9 |
| Msa1044030 | AT1G49010.1 | 49.275 | 69 | 31 | 2 | 127 | 194 | 144 | 209 | 4.62e-14 | 71.2 |
| Msa1044030 | AT5G05790.2 | 51.562 | 64 | 28 | 1 | 125 | 188 | 139 | 199 | 1.15e-13 | 69.7 |
| Msa1044030 | AT5G05790.1 | 51.562 | 64 | 28 | 1 | 125 | 188 | 139 | 199 | 1.15e-13 | 69.7 |
| Msa1044030 | AT5G61620.1 | 50.000 | 62 | 28 | 1 | 125 | 186 | 116 | 174 | 6.06e-13 | 67.8 |
| Msa1044030 | AT5G56840.1 | 46.154 | 65 | 33 | 1 | 125 | 189 | 99 | 161 | 1.10e-12 | 66.2 |
| Msa1044030 | AT4G09450.1 | 50.820 | 61 | 27 | 1 | 127 | 187 | 101 | 158 | 2.15e-12 | 64.7 |
| Msa1044030 | AT5G47390.1 | 36.735 | 98 | 52 | 4 | 127 | 222 | 106 | 195 | 2.71e-12 | 66.2 |
| Msa1044030 | AT1G19000.2 | 38.235 | 102 | 54 | 3 | 125 | 226 | 110 | 202 | 1.18e-11 | 63.9 |
| Msa1044030 | AT1G19000.1 | 38.235 | 102 | 54 | 3 | 125 | 226 | 110 | 202 | 1.18e-11 | 63.9 |
| Msa1044030 | AT1G70000.1 | 41.026 | 78 | 41 | 2 | 127 | 204 | 108 | 180 | 3.53e-11 | 62.4 |
| Msa1044030 | AT1G70000.2 | 41.026 | 78 | 41 | 2 | 127 | 204 | 108 | 180 | 3.53e-11 | 62.4 |
| Msa1044030 | AT3G10590.1 | 51.562 | 64 | 27 | 1 | 127 | 190 | 121 | 180 | 4.07e-11 | 61.2 |
Find 45 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTGTGTCATTGTTGTTTA+AGG | 0.102533 | 7_2:+2199540 | None:intergenic |
| GTCATTGTCCTTGTTATTTA+AGG | 0.115096 | 7_2:+2199465 | None:intergenic |
| TTTCTTCTTCTCTATTTCTT+TGG | 0.241888 | 7_2:+2199588 | None:intergenic |
| TCTCTATTTCTTTGGCAGTT+TGG | 0.295652 | 7_2:+2199596 | None:intergenic |
| TTCTCAAGTTTGTTCATATC+AGG | 0.295923 | 7_2:+2199379 | None:intergenic |
| TTTGCTTCATGACTTCCTTC+TGG | 0.307695 | 7_2:+2203738 | None:intergenic |
| TGTCAAGTTTCTCTTGTTGT+TGG | 0.325112 | 7_2:+2203868 | None:intergenic |
| GCGCAACTTGTTTAACTTGT+TGG | 0.342312 | 7_2:-2199353 | Msa1044030:CDS |
| TGTTGGTCCATGCTATTCTC+AGG | 0.370831 | 7_2:+2203885 | None:intergenic |
| GATATGTAGGTCGTTTCTAC+AGG | 0.371977 | 7_2:-2199728 | Msa1044030:intron |
| ATGTTATCATCATTAGAGTT+TGG | 0.374150 | 7_2:+2203810 | None:intergenic |
| AGGCCAACTGATACATTTGT+TGG | 0.437602 | 7_2:+2199428 | None:intergenic |
| CTATTTCTTTGGCAGTTTGG+TGG | 0.446999 | 7_2:+2199599 | None:intergenic |
| TTGGCCTTGCTTTATCCAAT+CGG | 0.464369 | 7_2:-2199412 | Msa1044030:CDS |
| GACACTGATGTCGTTGAGTC+GGG | 0.467326 | 7_2:-2203849 | Msa1044030:CDS |
| GGCCAACTGATACATTTGTT+GGG | 0.476834 | 7_2:+2199429 | None:intergenic |
| GCATGACTAGCAATTTGAGT+TGG | 0.487768 | 7_2:+2199640 | None:intergenic |
| GTTGGTCCATGCTATTCTCA+GGG | 0.498294 | 7_2:+2203886 | None:intergenic |
| TACAATTTAAGAGTACAAGA+TGG | 0.527125 | 7_2:-2201935 | Msa1044030:CDS |
| AAAGAGAGGGCGTAAGGAAA+GGG | 0.530997 | 7_2:-2203718 | Msa1044030:CDS |
| CAAAGAGAGGGCGTAAGGAA+AGG | 0.532803 | 7_2:-2203719 | Msa1044030:CDS |
| TCAGGAAGTGCAGTACCGAT+TGG | 0.538889 | 7_2:+2199397 | None:intergenic |
| ATATGTAGGTCGTTTCTACA+GGG | 0.546671 | 7_2:-2199727 | Msa1044030:intron |
| TGACACTGATGTCGTTGAGT+CGG | 0.546703 | 7_2:-2203850 | Msa1044030:CDS |
| TTTAAGGTAGCTGTGTCTTG+AGG | 0.565081 | 7_2:+2199481 | None:intergenic |
| TGAAGCAAAGAGAGGGCGTA+AGG | 0.567823 | 7_2:-2203724 | Msa1044030:CDS |
| ACAATTTAAGAGTACAAGAT+GGG | 0.574479 | 7_2:-2201934 | Msa1044030:CDS |
| CACAGCTACCTTAAATAACA+AGG | 0.577999 | 7_2:-2199473 | Msa1044030:CDS |
| AACCCAACAAATGTATCAGT+TGG | 0.579773 | 7_2:-2199431 | Msa1044030:CDS |
| AGTACAAGATGGGAGCTACA+TGG | 0.581291 | 7_2:-2201924 | Msa1044030:CDS |
| GGCGTAAGGAAAGGGTACAT+TGG | 0.585151 | 7_2:-2203710 | Msa1044030:CDS |
| AAGGTAGCTGTGTCTTGAGG+AGG | 0.587982 | 7_2:+2199484 | None:intergenic |
| TAAGGAAAGGGTACATTGGA+CGG | 0.593107 | 7_2:-2203706 | Msa1044030:CDS |
| GAAAGGGTACATTGGACGGA+AGG | 0.614122 | 7_2:-2203702 | Msa1044030:CDS |
| TTGGTCCATGCTATTCTCAG+GGG | 0.618470 | 7_2:+2203887 | None:intergenic |
| TGGTCCATGCTATTCTCAGG+GGG | 0.624422 | 7_2:+2203888 | None:intergenic |
| ATTAGAGTTTGGAATTGCGA+CGG | 0.624770 | 7_2:+2203821 | None:intergenic |
| ATCATATTGATCTAAATGAG+AGG | 0.625540 | 7_2:-2203926 | Msa1044030:CDS |
| GAAGTCATGAAGCAAAGAGA+GGG | 0.628581 | 7_2:-2203731 | Msa1044030:CDS |
| GGAAGTCATGAAGCAAAGAG+AGG | 0.629765 | 7_2:-2203732 | Msa1044030:CDS |
| CAAGCTGAGTCAGTACCAGA+AGG | 0.630435 | 7_2:-2203753 | Msa1044030:intron |
| ATGTAGGTCGTTTCTACAGG+GGG | 0.657825 | 7_2:-2199725 | Msa1044030:intron |
| TCATTTAGATCAATATGATG+AGG | 0.665709 | 7_2:+2203930 | None:intergenic |
| AGTACCGATTGGATAAAGCA+AGG | 0.686649 | 7_2:+2199408 | None:intergenic |
| TATGTAGGTCGTTTCTACAG+GGG | 0.695640 | 7_2:-2199726 | Msa1044030:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTATTTAAATATTATT+AGG | - | chr7_2:2201027-2201046 | Msa1044030:intron | 0.0% |
| !! | TATACATTATAATTCTATTT+AGG | - | chr7_2:2199724-2199743 | Msa1044030:intron | 10.0% |
| !! | ATACATTATAATTCTATTTA+GGG | - | chr7_2:2199725-2199744 | Msa1044030:intron | 10.0% |
| !!! | TTGAAATTTTATAAAATTTG+TGG | - | chr7_2:2199797-2199816 | Msa1044030:intron | 10.0% |
| !!! | TGAAATTTTATAAAATTTGT+GGG | - | chr7_2:2199798-2199817 | Msa1044030:intron | 10.0% |
| !! | TATTTATTATATTCTCTATT+TGG | - | chr7_2:2199904-2199923 | Msa1044030:intron | 10.0% |
| !! | CCAAAAAAATAATAAAAAAA+TGG | + | chr7_2:2200578-2200597 | None:intergenic | 10.0% |
| !!! | CCATTTTTTTATTATTTTTT+TGG | - | chr7_2:2200575-2200594 | Msa1044030:intron | 10.0% |
| !!! | ATTTTTTTATGTAAAATATG+TGG | - | chr7_2:2202011-2202030 | Msa1044030:intron | 10.0% |
| !! | ATTATCGTAAATAAAATAAA+GGG | + | chr7_2:2202594-2202613 | None:intergenic | 10.0% |
| !! | AATTATCGTAAATAAAATAA+AGG | + | chr7_2:2202595-2202614 | None:intergenic | 10.0% |
| !! | CTAATTAATATTATCAATAT+AGG | + | chr7_2:2202800-2202819 | None:intergenic | 10.0% |
| !!! | ATATTGATAATATTAATTAG+TGG | - | chr7_2:2202800-2202819 | Msa1044030:intron | 10.0% |
| !!! | AAATATATTTTTGTTCATAT+AGG | - | chr7_2:2203470-2203489 | Msa1044030:intron | 10.0% |
| !! | ATTATAATGTATATATTCCA+AGG | + | chr7_2:2199717-2199736 | None:intergenic | 15.0% |
| !!! | GAAATTTTATAAAATTTGTG+GGG | - | chr7_2:2199799-2199818 | Msa1044030:intron | 15.0% |
| !! | TAAATATCTCTATAGATAAA+AGG | + | chr7_2:2200303-2200322 | None:intergenic | 15.0% |
| !!! | AAAAAAATGCCTTTTATTTT+AGG | - | chr7_2:2201664-2201683 | Msa1044030:intron | 15.0% |
| !!! | AAAAAATGCCTTTTATTTTA+GGG | - | chr7_2:2201665-2201684 | Msa1044030:intron | 15.0% |
| !! | AAATAAAAAGTAAATTAGAG+AGG | + | chr7_2:2201775-2201794 | None:intergenic | 15.0% |
| !! | AAATTTATGGTTTAAATGAA+GGG | + | chr7_2:2201919-2201938 | None:intergenic | 15.0% |
| !!! | ATTTTTGATCTAGAAATTTA+TGG | + | chr7_2:2201932-2201951 | None:intergenic | 15.0% |
| !!! | GTAATTTGTCTTTAATTTAA+GGG | + | chr7_2:2202145-2202164 | None:intergenic | 15.0% |
| !!! | TTAATTTTGAAATACAATGT+AGG | + | chr7_2:2202174-2202193 | None:intergenic | 15.0% |
| !! | GTATTTCAAAATTAATTTCA+CGG | - | chr7_2:2202179-2202198 | Msa1044030:intron | 15.0% |
| !! | GTCAAAAATAAAAAATCTAA+TGG | + | chr7_2:2202293-2202312 | None:intergenic | 15.0% |
| !!! | TTAGATTTTTTATTTTTGAC+TGG | - | chr7_2:2202293-2202312 | Msa1044030:intron | 15.0% |
| !! | ATTTATTTAAAAGAAGAAGA+AGG | - | chr7_2:2202356-2202375 | Msa1044030:intron | 15.0% |
| !!! | ATAAATAAGGGTATAATAAT+GGG | + | chr7_2:2203284-2203303 | None:intergenic | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+TGG | + | chr7_2:2203285-2203304 | None:intergenic | 15.0% |
| !! | AAAATGAAGTAACTATATAT+TGG | + | chr7_2:2203584-2203603 | None:intergenic | 15.0% |
| !!! | ATTTATATTTTGTGATATGT+AGG | - | chr7_2:2203626-2203645 | Msa1044030:intron | 15.0% |
| !! | TAATCCAAATTTGATGAAAT+TGG | - | chr7_2:2199351-2199370 | Msa1044030:CDS | 20.0% |
| !! | AAAACCAATTTCATCAAATT+TGG | + | chr7_2:2199358-2199377 | None:intergenic | 20.0% |
| !!! | AAATTGGTTTTAAGTTCTTA+TGG | - | chr7_2:2199367-2199386 | Msa1044030:CDS | 20.0% |
| !! | TGTAGATTATTCCTATAAAA+GGG | + | chr7_2:2200208-2200227 | None:intergenic | 20.0% |
| !! | TTGTAGATTATTCCTATAAA+AGG | + | chr7_2:2200209-2200228 | None:intergenic | 20.0% |
| !! | TCTATAGATAAAAGGTAATT+GGG | + | chr7_2:2200295-2200314 | None:intergenic | 20.0% |
| !!! | AGCTTTATTAAAATTGTGTT+TGG | + | chr7_2:2200411-2200430 | None:intergenic | 20.0% |
| !!! | ATTATTAGGAAAGTATTACT+TGG | - | chr7_2:2201041-2201060 | Msa1044030:intron | 20.0% |
| !!! | GATAAATATCCTTTTATGTT+TGG | + | chr7_2:2201081-2201100 | None:intergenic | 20.0% |
| !! | AATTTATGGTTTAAATGAAG+GGG | + | chr7_2:2201918-2201937 | None:intergenic | 20.0% |
| !! | GAAATTTATGGTTTAAATGA+AGG | + | chr7_2:2201920-2201939 | None:intergenic | 20.0% |
| !!! | GGTAATTTGTCTTTAATTTA+AGG | + | chr7_2:2202146-2202165 | None:intergenic | 20.0% |
| !!! | TTTTAAATAAATATACAGCC+AGG | + | chr7_2:2202348-2202367 | None:intergenic | 20.0% |
| !!! | CTTTTAAGTTAAAATCTGTT+TGG | + | chr7_2:2202655-2202674 | None:intergenic | 20.0% |
| !!! | TTTTAGACATCAAAAAAGTA+GGG | - | chr7_2:2202764-2202783 | Msa1044030:intron | 20.0% |
| !! | AATTTGTAGATAGTGTATTT+AGG | - | chr7_2:2202858-2202877 | Msa1044030:intron | 20.0% |
| !! | TCTAAATACTACAAAAAATG+TGG | + | chr7_2:2203007-2203026 | None:intergenic | 20.0% |
| !! | AAAAATAATAAATGCTGCAT+TGG | + | chr7_2:2203260-2203279 | None:intergenic | 20.0% |
| !! | GGATGAAATTCAATAAATAA+GGG | + | chr7_2:2203296-2203315 | None:intergenic | 20.0% |
| !! | TGGATGAAATTCAATAAATA+AGG | + | chr7_2:2203297-2203316 | None:intergenic | 20.0% |
| !!! | TTATGGTTGTTTTTTGTTAC+AGG | - | chr7_2:2199384-2199403 | Msa1044030:CDS | 25.0% |
| !!! | TGTTTTTTGTTACAGGAATA+TGG | - | chr7_2:2199391-2199410 | Msa1044030:CDS | 25.0% |
| ! | TCATTTAGATCAATATGATG+AGG | + | chr7_2:2199440-2199459 | None:intergenic | 25.0% |
| ! | ATCATATTGATCTAAATGAG+AGG | - | chr7_2:2199441-2199460 | Msa1044030:CDS | 25.0% |
| ! | ATGTTATCATCATTAGAGTT+TGG | + | chr7_2:2199560-2199579 | None:intergenic | 25.0% |
| ! | GCAAATTTAATCTTAGAGTA+AGG | - | chr7_2:2200030-2200049 | Msa1044030:intron | 25.0% |
| ! | CTCTATAGATAAAAGGTAAT+TGG | + | chr7_2:2200296-2200315 | None:intergenic | 25.0% |
| ! | AAAGAAGAAAATCCAATAGA+AGG | - | chr7_2:2200457-2200476 | Msa1044030:intron | 25.0% |
| !! | TATATCATGTAAAAGGCATA+AGG | + | chr7_2:2200808-2200827 | None:intergenic | 25.0% |
| !!! | ATCTTTTCTTGTTTGATTAG+TGG | + | chr7_2:2201273-2201292 | None:intergenic | 25.0% |
| !! | TACAATTTAAGAGTACAAGA+TGG | - | chr7_2:2201432-2201451 | Msa1044030:intron | 25.0% |
| !! | ACAATTTAAGAGTACAAGAT+GGG | - | chr7_2:2201433-2201452 | Msa1044030:intron | 25.0% |
| ! | TAAAATTGAGGTCCATATTA+GGG | + | chr7_2:2201694-2201713 | None:intergenic | 25.0% |
| ! | TTAAAATTGAGGTCCATATT+AGG | + | chr7_2:2201695-2201714 | None:intergenic | 25.0% |
| !! | AATATGGACCTCAATTTTAA+AGG | - | chr7_2:2201695-2201714 | Msa1044030:intron | 25.0% |
| ! | TAGATCAAAAATTCAAAACC+TGG | - | chr7_2:2201940-2201959 | Msa1044030:CDS | 25.0% |
| ! | AGATCAAAAATTCAAAACCT+GGG | - | chr7_2:2201941-2201960 | Msa1044030:CDS | 25.0% |
| ! | TCACGGTGAATTATAAATTA+TGG | - | chr7_2:2202196-2202215 | Msa1044030:intron | 25.0% |
| ! | ACAAGAACTAAGATCAAATA+CGG | - | chr7_2:2202252-2202271 | Msa1044030:intron | 25.0% |
| !!! | AAAATGATTTTTTTGCTGTG+TGG | - | chr7_2:2202474-2202493 | Msa1044030:intron | 25.0% |
| !!! | AAATGATTTTTTTGCTGTGT+GGG | - | chr7_2:2202475-2202494 | Msa1044030:intron | 25.0% |
| ! | AAGCTAAAGTTAAAGTTGTT+TGG | + | chr7_2:2202708-2202727 | None:intergenic | 25.0% |
| !! | CTTTTAGACATCAAAAAAGT+AGG | - | chr7_2:2202763-2202782 | Msa1044030:intron | 25.0% |
| ! | TGCAAAGTAGACTTATAAAA+AGG | - | chr7_2:2202899-2202918 | Msa1044030:intron | 25.0% |
| ! | GCAAAGTAGACTTATAAAAA+GGG | - | chr7_2:2202900-2202919 | Msa1044030:intron | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | - | chr7_2:2203327-2203346 | Msa1044030:intron | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | - | chr7_2:2203328-2203347 | Msa1044030:intron | 25.0% |
| !!! | ATTGATTGTGTTGATTTCAA+TGG | + | chr7_2:2203380-2203399 | None:intergenic | 25.0% |
| !! | CTCTAAATTATTGTCGTTTA+AGG | + | chr7_2:2203428-2203447 | None:intergenic | 25.0% |
| ! | AAACGACAATAATTTAGAGA+CGG | - | chr7_2:2203429-2203448 | Msa1044030:intron | 25.0% |
| !! | TTTCTTCTTCTCTATTTCTT+TGG | + | chr7_2:2203782-2203801 | None:intergenic | 25.0% |
| !!! | TTTCAAGTTGTTTTTCAAGA+GGG | + | chr7_2:2203861-2203880 | None:intergenic | 25.0% |
| !!! | ATTTCAAGTTGTTTTTCAAG+AGG | + | chr7_2:2203862-2203881 | None:intergenic | 25.0% |
| ! | TTTTGTTACAGGAATATGGA+AGG | - | chr7_2:2199395-2199414 | Msa1044030:CDS | 30.0% |
| GTAAGTATTCAATCTATCCT+TGG | - | chr7_2:2199697-2199716 | Msa1044030:CDS | 30.0% | |
| AACAAACAGATACAAAGACT+GGG | + | chr7_2:2199882-2199901 | None:intergenic | 30.0% | |
| AAACAAACAGATACAAAGAC+TGG | + | chr7_2:2199883-2199902 | None:intergenic | 30.0% | |
| !!! | TGAGTATCAATTTTGGAGTA+AGG | + | chr7_2:2200179-2200198 | None:intergenic | 30.0% |
| GGAATAATCTACAAAAATCG+AGG | - | chr7_2:2200215-2200234 | Msa1044030:intron | 30.0% | |
| TTTCAATGTATGAGCATGTT+TGG | - | chr7_2:2200339-2200358 | Msa1044030:intron | 30.0% | |
| AGAGAAGTGGAAAATAAGTA+GGG | + | chr7_2:2200365-2200384 | None:intergenic | 30.0% | |
| AAGAGAAGTGGAAAATAAGT+AGG | + | chr7_2:2200366-2200385 | None:intergenic | 30.0% | |
| ! | TTCTACTTCTAAGAAGAAGT+GGG | - | chr7_2:2200384-2200403 | Msa1044030:intron | 30.0% |
| !! | ATTTTCAAAGTGCCTTCTAT+TGG | + | chr7_2:2200472-2200491 | None:intergenic | 30.0% |
| TCACTAGGTTTATTCAGATT+TGG | + | chr7_2:2200641-2200660 | None:intergenic | 30.0% | |
| TGGAACATATATATGTCACT+AGG | + | chr7_2:2200656-2200675 | None:intergenic | 30.0% | |
| CAGTGCATATATCATGTAAA+AGG | + | chr7_2:2200815-2200834 | None:intergenic | 30.0% | |
| TTCAGATCCATTTGTTCTTT+AGG | - | chr7_2:2200882-2200901 | Msa1044030:intron | 30.0% | |
| TCAGATCCATTTGTTCTTTA+GGG | - | chr7_2:2200883-2200902 | Msa1044030:intron | 30.0% | |
| GGATATTTATCACCATACAA+AGG | - | chr7_2:2201090-2201109 | Msa1044030:intron | 30.0% | |
| TGATATCTTTCACCTTTGTA+TGG | + | chr7_2:2201105-2201124 | None:intergenic | 30.0% | |
| !! | CACATTTCTGATTTTAGAGA+TGG | - | chr7_2:2201123-2201142 | Msa1044030:intron | 30.0% |
| ! | AGTGTCATTGAAAGAACAAT+TGG | - | chr7_2:2201201-2201220 | Msa1044030:intron | 30.0% |
| ! | TTGAAAGAACAATTGGTGTT+TGG | - | chr7_2:2201208-2201227 | Msa1044030:intron | 30.0% |
| ! | TCTTGTTTGATTAGTGGAAA+TGG | + | chr7_2:2201267-2201286 | None:intergenic | 30.0% |
| CATAACTTCATTCGAATATG+TGG | - | chr7_2:2201315-2201334 | Msa1044030:intron | 30.0% | |
| AAGATGAGGAATTCAACAAA+TGG | - | chr7_2:2201343-2201362 | Msa1044030:intron | 30.0% | |
| AGATGAGGAATTCAACAAAT+GGG | - | chr7_2:2201344-2201363 | Msa1044030:intron | 30.0% | |
| !! | TTTGTTTTCCAACAACTTAG+TGG | + | chr7_2:2201490-2201509 | None:intergenic | 30.0% |
| AAAATTGAGGTCCATATTAG+GGG | + | chr7_2:2201693-2201712 | None:intergenic | 30.0% | |
| TGTGTAATCCTAAAATCCAT+AGG | - | chr7_2:2201804-2201823 | Msa1044030:intron | 30.0% | |
| TAATAGAGAGAAATGGAAAG+AGG | + | chr7_2:2201847-2201866 | None:intergenic | 30.0% | |
| TGAAATACAATGTAGGTCTT+GGG | + | chr7_2:2202167-2202186 | None:intergenic | 30.0% | |
| TTGAAATACAATGTAGGTCT+TGG | + | chr7_2:2202168-2202187 | None:intergenic | 30.0% | |
| CAAGAACTAAGATCAAATAC+GGG | - | chr7_2:2202253-2202272 | Msa1044030:intron | 30.0% | |
| ACTGGAATGTCATTATTAGT+TGG | - | chr7_2:2202311-2202330 | Msa1044030:intron | 30.0% | |
| TCATTATTAGTTGGAGTAGA+AGG | - | chr7_2:2202320-2202339 | Msa1044030:intron | 30.0% | |
| TAAAAGAAGAAGAAGGAATC+TGG | - | chr7_2:2202363-2202382 | Msa1044030:intron | 30.0% | |
| TGGTTATGAAGAGACAAAAA+TGG | - | chr7_2:2202383-2202402 | Msa1044030:intron | 30.0% | |
| !! | GTAGATACTTTGGTGTTATA+TGG | - | chr7_2:2202414-2202433 | Msa1044030:intron | 30.0% |
| !! | ATACTTTGGTGTTATATGGA+AGG | - | chr7_2:2202418-2202437 | Msa1044030:intron | 30.0% |
| !!! | AATGATTTTTTTGCTGTGTG+GGG | - | chr7_2:2202476-2202495 | Msa1044030:intron | 30.0% |
| TCTTAAAAACCTGCTATAGA+AGG | - | chr7_2:2202513-2202532 | Msa1044030:intron | 30.0% | |
| ! | ATTGATGGACCCTTAAAATT+GGG | - | chr7_2:2202552-2202571 | Msa1044030:intron | 30.0% |
| ! | AATATGGTCCCCAATTTTAA+GGG | + | chr7_2:2202564-2202583 | None:intergenic | 30.0% |
| ! | TAATATGGTCCCCAATTTTA+AGG | + | chr7_2:2202565-2202584 | None:intergenic | 30.0% |
| TTAAAATTGGGGACCATATT+AGG | - | chr7_2:2202564-2202583 | Msa1044030:intron | 30.0% | |
| TAAAATTGGGGACCATATTA+GGG | - | chr7_2:2202565-2202584 | Msa1044030:intron | 30.0% | |
| AGTAGACTTATAAAAAGGGA+CGG | - | chr7_2:2202904-2202923 | Msa1044030:intron | 30.0% | |
| ATTAGCTATGTGATGACAAT+TGG | + | chr7_2:2203078-2203097 | None:intergenic | 30.0% | |
| AAGAGACTATTATTGTGAGA+CGG | + | chr7_2:2203194-2203213 | None:intergenic | 30.0% | |
| CCCTTATTAATTGTAGTTAG+TGG | + | chr7_2:2203331-2203350 | None:intergenic | 30.0% | |
| TTGAATATCAGTAAAGTCAG+AGG | - | chr7_2:2203513-2203532 | Msa1044030:intron | 30.0% | |
| !! | TACTGTGTCATTGTTGTTTA+AGG | + | chr7_2:2203830-2203849 | None:intergenic | 30.0% |
| !! | GTCATTGTCCTTGTTATTTA+AGG | + | chr7_2:2203905-2203924 | None:intergenic | 30.0% |
| ! | TTCTCAAGTTTGTTCATATC+AGG | + | chr7_2:2203991-2204010 | None:intergenic | 30.0% |
| ! | TGTCAAGTTTCTCTTGTTGT+TGG | + | chr7_2:2199502-2199521 | None:intergenic | 35.0% |
| ! | ATTAGAGTTTGGAATTGCGA+CGG | + | chr7_2:2199549-2199568 | None:intergenic | 35.0% |
| TATATACTCGTATACCCGTT+TGG | - | chr7_2:2199828-2199847 | Msa1044030:intron | 35.0% | |
| ATATACTCGTATACCCGTTT+GGG | - | chr7_2:2199829-2199848 | Msa1044030:intron | 35.0% | |
| ! | ACTTTTCTCCGAATAGAGTA+GGG | - | chr7_2:2200055-2200074 | Msa1044030:intron | 35.0% |
| CTCATCTTCACTCTATACTA+AGG | - | chr7_2:2200144-2200163 | Msa1044030:intron | 35.0% | |
| ! | GACAGAGTGAGTATCAATTT+TGG | + | chr7_2:2200186-2200205 | None:intergenic | 35.0% |
| TCTTAGAAGTAGAAGAGAAG+TGG | + | chr7_2:2200378-2200397 | None:intergenic | 35.0% | |
| ! | CTTCTACTTCTAAGAAGAAG+TGG | - | chr7_2:2200383-2200402 | Msa1044030:intron | 35.0% |
| ! | TCTACTTCTAAGAAGAAGTG+GGG | - | chr7_2:2200385-2200404 | Msa1044030:intron | 35.0% |
| TAAGTTGTGAAAGTGAGCTT+TGG | - | chr7_2:2200491-2200510 | Msa1044030:intron | 35.0% | |
| AAGTTGTGAAAGTGAGCTTT+GGG | - | chr7_2:2200492-2200511 | Msa1044030:intron | 35.0% | |
| AAATGGAATATAGTCCTGTG+CGG | + | chr7_2:2200561-2200580 | None:intergenic | 35.0% | |
| AAAGGGAAAAAATGTTTGGC+GGG | + | chr7_2:2200607-2200626 | None:intergenic | 35.0% | |
| GAAAGGGAAAAAATGTTTGG+CGG | + | chr7_2:2200608-2200627 | None:intergenic | 35.0% | |
| CTGGAAAGGGAAAAAATGTT+TGG | + | chr7_2:2200611-2200630 | None:intergenic | 35.0% | |
| !!! | CAAACATTTTTTCCCTTTCC+AGG | - | chr7_2:2200609-2200628 | Msa1044030:intron | 35.0% |
| CTAGGTTTATTCAGATTTGG+CGG | + | chr7_2:2200638-2200657 | None:intergenic | 35.0% | |
| AGATGATGTACCTGCAAAAA+AGG | + | chr7_2:2200721-2200740 | None:intergenic | 35.0% | |
| ! | CATGTAAAAGGCATAAGGAA+AGG | + | chr7_2:2200803-2200822 | None:intergenic | 35.0% |
| ! | GCACTGTACATGAAGTTTTT+AGG | - | chr7_2:2200829-2200848 | Msa1044030:intron | 35.0% |
| !! | TACATGAAGTTTTTAGGCTG+TGG | - | chr7_2:2200835-2200854 | Msa1044030:intron | 35.0% |
| !! | ACATGAAGTTTTTAGGCTGT+GGG | - | chr7_2:2200836-2200855 | Msa1044030:intron | 35.0% |
| CACTATCCCTAAAGAACAAA+TGG | + | chr7_2:2200892-2200911 | None:intergenic | 35.0% | |
| ! | AAGTATTACTTGGTTGATGC+AGG | - | chr7_2:2201051-2201070 | Msa1044030:intron | 35.0% |
| ! | CAATTGGTGTTTGGAAGAAA+AGG | - | chr7_2:2201217-2201236 | Msa1044030:intron | 35.0% |
| TTTCTTTCTTCTTCACGTTC+GGG | + | chr7_2:2201390-2201409 | None:intergenic | 35.0% | |
| GTTTCTTTCTTCTTCACGTT+CGG | + | chr7_2:2201391-2201410 | None:intergenic | 35.0% | |
| TCAAATAGCCACTAAGTTGT+TGG | - | chr7_2:2201479-2201498 | Msa1044030:intron | 35.0% | |
| AAAATGAAACCTGCTGTAGA+AGG | + | chr7_2:2201746-2201765 | None:intergenic | 35.0% | |
| ! | ATTGTCAGCCTATGGATTTT+AGG | + | chr7_2:2201815-2201834 | None:intergenic | 35.0% |
| GAGCGATTAATAGAGAGAAA+TGG | + | chr7_2:2201854-2201873 | None:intergenic | 35.0% | |
| TCTGTCTATCACAGCAAAAA+GGG | + | chr7_2:2201975-2201994 | None:intergenic | 35.0% | |
| TTCTGTCTATCACAGCAAAA+AGG | + | chr7_2:2201976-2201995 | None:intergenic | 35.0% | |
| !! | AGTGAGATTTTGAGAAACTG+TGG | - | chr7_2:2202069-2202088 | Msa1044030:intron | 35.0% |
| !! | GTGAGATTTTGAGAAACTGT+GGG | - | chr7_2:2202070-2202089 | Msa1044030:intron | 35.0% |
| ! | TTGAGAGTACATTTCTCATG+AGG | - | chr7_2:2202109-2202128 | Msa1044030:intron | 35.0% |
| ! | TGAGAGTACATTTCTCATGA+GGG | - | chr7_2:2202110-2202129 | Msa1044030:intron | 35.0% |
| TCTAAATGACCTTCTATAGC+AGG | + | chr7_2:2202525-2202544 | None:intergenic | 35.0% | |
| CTATAGAAGGTCATTTAGAG+AGG | - | chr7_2:2202526-2202545 | Msa1044030:intron | 35.0% | |
| !! | CAATTTTAAGGGTCCATCAA+TGG | + | chr7_2:2202553-2202572 | None:intergenic | 35.0% |
| ! | CATTGATGGACCCTTAAAAT+TGG | - | chr7_2:2202551-2202570 | Msa1044030:intron | 35.0% |
| ! | TTGATGGACCCTTAAAATTG+GGG | - | chr7_2:2202553-2202572 | Msa1044030:intron | 35.0% |
| AAAATTGGGGACCATATTAG+GGG | - | chr7_2:2202566-2202585 | Msa1044030:intron | 35.0% | |
| TTATCAATATAGGGTGCGTT+TGG | + | chr7_2:2202790-2202809 | None:intergenic | 35.0% | |
| ACATGTGTCTAGGTTTAGAT+TGG | + | chr7_2:2203136-2203155 | None:intergenic | 35.0% | |
| AGTTAGTGGAGTAGTTAAGT+TGG | + | chr7_2:2203317-2203336 | None:intergenic | 35.0% | |
| GACAATAATTTAGAGACGGA+GGG | - | chr7_2:2203433-2203452 | Msa1044030:intron | 35.0% | |
| ! | TGCAAGTGTTTGCATTGTTT+TGG | - | chr7_2:2203549-2203568 | Msa1044030:intron | 35.0% |
| ! | GCAAGTGTTTGCATTGTTTT+GGG | - | chr7_2:2203550-2203569 | Msa1044030:intron | 35.0% |
| ATATGTAGGTCGTTTCTACA+GGG | - | chr7_2:2203640-2203659 | Msa1044030:intron | 35.0% | |
| ! | TCTCTATTTCTTTGGCAGTT+TGG | + | chr7_2:2203774-2203793 | None:intergenic | 35.0% |
| CACAGCTACCTTAAATAACA+AGG | - | chr7_2:2203894-2203913 | Msa1044030:CDS | 35.0% | |
| AACCCAACAAATGTATCAGT+TGG | - | chr7_2:2203936-2203955 | Msa1044030:CDS | 35.0% | |
| TTTGCTTCATGACTTCCTTC+TGG | + | chr7_2:2199632-2199651 | None:intergenic | 40.0% | |
| GAAGTCATGAAGCAAAGAGA+GGG | - | chr7_2:2199636-2199655 | Msa1044030:CDS | 40.0% | |
| ! | TAAGGAAAGGGTACATTGGA+CGG | - | chr7_2:2199661-2199680 | Msa1044030:CDS | 40.0% |
| AAACAGATACAAAGACTGGG+AGG | + | chr7_2:2199879-2199898 | None:intergenic | 40.0% | |
| ! | GACTTTTCTCCGAATAGAGT+AGG | - | chr7_2:2200054-2200073 | Msa1044030:intron | 40.0% |
| CAACTCATCCCTACTCTATT+CGG | + | chr7_2:2200066-2200085 | None:intergenic | 40.0% | |
| ! | ACTCACTCTGTCCCTTTTAT+AGG | - | chr7_2:2200194-2200213 | Msa1044030:intron | 40.0% |
| !!! | TGAGCTTTGGGACAACTTTT+CGG | - | chr7_2:2200504-2200523 | Msa1044030:intron | 40.0% |
| AATGGAATATAGTCCTGTGC+GGG | + | chr7_2:2200560-2200579 | None:intergenic | 40.0% | |
| GATCTGAATCTGATCACGAT+AGG | + | chr7_2:2200870-2200889 | None:intergenic | 40.0% | |
| GCAGGAGATCCAAACATAAA+AGG | - | chr7_2:2201069-2201088 | Msa1044030:intron | 40.0% | |
| ! | TTGGTGTTTGGAAGAAAAGG+TGG | - | chr7_2:2201220-2201239 | Msa1044030:intron | 40.0% |
| AATATGTGGCGTTCAAGATG+AGG | - | chr7_2:2201329-2201348 | Msa1044030:intron | 40.0% | |
| AACAAATGGGACCAAATCCT+TGG | - | chr7_2:2201357-2201376 | Msa1044030:intron | 40.0% | |
| TAGGGGCTCCCTAAAATAAA+AGG | + | chr7_2:2201676-2201695 | None:intergenic | 40.0% | |
| !! | ATTTTAGGGAGCCCCTAATA+TGG | - | chr7_2:2201679-2201698 | Msa1044030:intron | 40.0% |
| !! | TGGGTGGACCTTTAAAATTG+AGG | + | chr7_2:2201706-2201725 | None:intergenic | 40.0% |
| GGTCAATTAGAGAGGATCAT+GGG | + | chr7_2:2201725-2201744 | None:intergenic | 40.0% | |
| AGGTCAATTAGAGAGGATCA+TGG | + | chr7_2:2201726-2201745 | None:intergenic | 40.0% | |
| CTGTAGAAGGTCAATTAGAG+AGG | + | chr7_2:2201733-2201752 | None:intergenic | 40.0% | |
| TCTAATTGACCTTCTACAGC+AGG | - | chr7_2:2201734-2201753 | Msa1044030:intron | 40.0% | |
| GGAAAATGATTGTCAGCCTA+TGG | + | chr7_2:2201823-2201842 | None:intergenic | 40.0% | |
| TAGAGAGAAATGGAAAGAGG+AGG | + | chr7_2:2201844-2201863 | None:intergenic | 40.0% | |
| TTCTCTCTATTAATCGCTCC+AGG | - | chr7_2:2201855-2201874 | Msa1044030:intron | 40.0% | |
| ATGAGATAGAGGAAGAAGGA+AGG | + | chr7_2:2201883-2201902 | None:intergenic | 40.0% | |
| GAAGATGAGATAGAGGAAGA+AGG | + | chr7_2:2201887-2201906 | None:intergenic | 40.0% | |
| GAAAGGTGAAGATGAGATAG+AGG | + | chr7_2:2201894-2201913 | None:intergenic | 40.0% | |
| GGTTTAAATGAAGGGGTGAA+AGG | + | chr7_2:2201911-2201930 | None:intergenic | 40.0% | |
| CTGTCTATCACAGCAAAAAG+GGG | + | chr7_2:2201974-2201993 | None:intergenic | 40.0% | |
| ! | GGTTTTGCACGTAGATACTT+TGG | - | chr7_2:2202404-2202423 | Msa1044030:intron | 40.0% |
| CATTTAGAGAGGACCATTGA+TGG | - | chr7_2:2202537-2202556 | Msa1044030:intron | 40.0% | |
| AATAAAGGGAGCCCCTAATA+TGG | + | chr7_2:2202580-2202599 | None:intergenic | 40.0% | |
| AGACTTATAAAAAGGGACGG+AGG | - | chr7_2:2202907-2202926 | Msa1044030:intron | 40.0% | |
| AGCTAATGACTAGACACTCA+AGG | - | chr7_2:2203091-2203110 | Msa1044030:intron | 40.0% | |
| GCTAATGACTAGACACTCAA+GGG | - | chr7_2:2203092-2203111 | Msa1044030:intron | 40.0% | |
| CCTAGACACATGTAGAACAA+CGG | - | chr7_2:2203143-2203162 | Msa1044030:intron | 40.0% | |
| GACTATTATTGTGAGACGGA+GGG | + | chr7_2:2203190-2203209 | None:intergenic | 40.0% | |
| AGACTATTATTGTGAGACGG+AGG | + | chr7_2:2203191-2203210 | None:intergenic | 40.0% | |
| AGGTTTGTGCACGGTTATTA+AGG | + | chr7_2:2203408-2203427 | None:intergenic | 40.0% | |
| ! | TGTCGTTTAAGGTTTGTGCA+CGG | + | chr7_2:2203417-2203436 | None:intergenic | 40.0% |
| CGACAATAATTTAGAGACGG+AGG | - | chr7_2:2203432-2203451 | Msa1044030:intron | 40.0% | |
| GATATGTAGGTCGTTTCTAC+AGG | - | chr7_2:2203639-2203658 | Msa1044030:intron | 40.0% | |
| TATGTAGGTCGTTTCTACAG+GGG | - | chr7_2:2203641-2203660 | Msa1044030:intron | 40.0% | |
| GCATGACTAGCAATTTGAGT+TGG | + | chr7_2:2203730-2203749 | None:intergenic | 40.0% | |
| ! | CTATTTCTTTGGCAGTTTGG+TGG | + | chr7_2:2203771-2203790 | None:intergenic | 40.0% |
| ! | TTTAAGGTAGCTGTGTCTTG+AGG | + | chr7_2:2203889-2203908 | None:intergenic | 40.0% |
| GGCCAACTGATACATTTGTT+GGG | + | chr7_2:2203941-2203960 | None:intergenic | 40.0% | |
| AGGCCAACTGATACATTTGT+TGG | + | chr7_2:2203942-2203961 | None:intergenic | 40.0% | |
| !! | TTGGCCTTGCTTTATCCAAT+CGG | - | chr7_2:2203955-2203974 | Msa1044030:CDS | 40.0% |
| !! | AGTACCGATTGGATAAAGCA+AGG | + | chr7_2:2203962-2203981 | None:intergenic | 40.0% |
| !! | GCGCAACTTGTTTAACTTGT+TGG | - | chr7_2:2204014-2204033 | Msa1044030:intron | 40.0% |
| TTGGTCCATGCTATTCTCAG+GGG | + | chr7_2:2199483-2199502 | None:intergenic | 45.0% | |
| GTTGGTCCATGCTATTCTCA+GGG | + | chr7_2:2199484-2199503 | None:intergenic | 45.0% | |
| TGTTGGTCCATGCTATTCTC+AGG | + | chr7_2:2199485-2199504 | None:intergenic | 45.0% | |
| TGACACTGATGTCGTTGAGT+CGG | - | chr7_2:2199517-2199536 | Msa1044030:CDS | 45.0% | |
| GGAAGTCATGAAGCAAAGAG+AGG | - | chr7_2:2199635-2199654 | Msa1044030:CDS | 45.0% | |
| ! | AAAGAGAGGGCGTAAGGAAA+GGG | - | chr7_2:2199649-2199668 | Msa1044030:CDS | 45.0% |
| ! | ATACCCGTTTGGGTTAATCC+TGG | - | chr7_2:2199839-2199858 | Msa1044030:intron | 45.0% |
| ! | TACCCGTTTGGGTTAATCCT+GGG | - | chr7_2:2199840-2199859 | Msa1044030:intron | 45.0% |
| TGACCCAGGATTAACCCAAA+CGG | + | chr7_2:2199846-2199865 | None:intergenic | 45.0% | |
| TACAAAGACTGGGAGGACAT+TGG | + | chr7_2:2199872-2199891 | None:intergenic | 45.0% | |
| ATTTGGCGGTTTCCTGGAAA+GGG | + | chr7_2:2200624-2200643 | None:intergenic | 45.0% | |
| ATTCAGATTTGGCGGTTTCC+TGG | + | chr7_2:2200630-2200649 | None:intergenic | 45.0% | |
| !! | TGTGGCAGAAAGCACTGAAA+TGG | + | chr7_2:2200676-2200695 | None:intergenic | 45.0% |
| GTACCTGCAAAAAAGGTCAG+CGG | + | chr7_2:2200714-2200733 | None:intergenic | 45.0% | |
| CGGGCATATATCCAAGGATT+TGG | + | chr7_2:2201371-2201390 | None:intergenic | 45.0% | |
| AGTACAAGATGGGAGCTACA+TGG | - | chr7_2:2201443-2201462 | Msa1044030:intron | 45.0% | |
| CAATTAGAGAGGATCATGGG+TGG | + | chr7_2:2201722-2201741 | None:intergenic | 45.0% | |
| GGTCACTGCACAAAAAACAC+AGG | - | chr7_2:2202217-2202236 | Msa1044030:intron | 45.0% | |
| TAGTTGGAGTAGAAGGAACC+TGG | - | chr7_2:2202327-2202346 | Msa1044030:intron | 45.0% | |
| AATGACTAGACACTCAAGGG+TGG | - | chr7_2:2203095-2203114 | Msa1044030:intron | 45.0% | |
| CCGTTGTTCTACATGTGTCT+AGG | + | chr7_2:2203146-2203165 | None:intergenic | 45.0% | |
| ATGTAGGTCGTTTCTACAGG+GGG | - | chr7_2:2203642-2203661 | Msa1044030:intron | 45.0% | |
| CTACAGGGGGTGAAAAAACA+TGG | - | chr7_2:2203655-2203674 | Msa1044030:intron | 45.0% | |
| AGGGGGTGAAAAAACATGGT+AGG | - | chr7_2:2203659-2203678 | Msa1044030:intron | 45.0% | |
| GGGGGTGAAAAAACATGGTA+GGG | - | chr7_2:2203660-2203679 | Msa1044030:intron | 45.0% | |
| GGGGTGAAAAAACATGGTAG+GGG | - | chr7_2:2203661-2203680 | Msa1044030:intron | 45.0% | |
| AAAAACATGGTAGGGGACGT+TGG | - | chr7_2:2203668-2203687 | Msa1044030:intron | 45.0% | |
| !! | TATATATATATATTTAACAT+GGG | + | chr7_2:2200931-2200950 | None:intergenic | 5.0% |
| !! | ATATATATATATATTTAACA+TGG | + | chr7_2:2200932-2200951 | None:intergenic | 5.0% |
| !! | TTTGAAAATAATAAAATATT+AGG | + | chr7_2:2201542-2201561 | None:intergenic | 5.0% |
| !! | TAATTAATATTATCAATATA+GGG | + | chr7_2:2202799-2202818 | None:intergenic | 5.0% |
| AGATCCCCCTGAGAATAGCA+TGG | - | chr7_2:2199475-2199494 | Msa1044030:CDS | 50.0% | |
| TGGTCCATGCTATTCTCAGG+GGG | + | chr7_2:2199482-2199501 | None:intergenic | 50.0% | |
| GACACTGATGTCGTTGAGTC+GGG | - | chr7_2:2199518-2199537 | Msa1044030:CDS | 50.0% | |
| CAAGCTGAGTCAGTACCAGA+AGG | - | chr7_2:2199614-2199633 | Msa1044030:CDS | 50.0% | |
| ! | TGAAGCAAAGAGAGGGCGTA+AGG | - | chr7_2:2199643-2199662 | Msa1044030:CDS | 50.0% |
| ! | CAAAGAGAGGGCGTAAGGAA+AGG | - | chr7_2:2199648-2199667 | Msa1044030:CDS | 50.0% |
| ! | GGCGTAAGGAAAGGGTACAT+TGG | - | chr7_2:2199657-2199676 | Msa1044030:CDS | 50.0% |
| ! | GAAAGGGTACATTGGACGGA+AGG | - | chr7_2:2199665-2199684 | Msa1044030:CDS | 50.0% |
| GACCCAGGATTAACCCAAAC+GGG | + | chr7_2:2199845-2199864 | None:intergenic | 50.0% | |
| ! | GTTTGGGTTAATCCTGGGTC+AGG | - | chr7_2:2199845-2199864 | Msa1044030:intron | 50.0% |
| !!! | GCTTTGGGACAACTTTTCGG+AGG | - | chr7_2:2200507-2200526 | Msa1044030:intron | 50.0% |
| TACACATTCGATTCCCGCAC+AGG | - | chr7_2:2200544-2200563 | Msa1044030:intron | 50.0% | |
| GATTTGGCGGTTTCCTGGAA+AGG | + | chr7_2:2200625-2200644 | None:intergenic | 50.0% | |
| AGAGATGGCAGTCAAGCACA+AGG | - | chr7_2:2201138-2201157 | Msa1044030:intron | 50.0% | |
| CACGTTCGGGCATATATCCA+AGG | + | chr7_2:2201377-2201396 | None:intergenic | 50.0% | |
| AAGGTAGCTGTGTCTTGAGG+AGG | + | chr7_2:2203886-2203905 | None:intergenic | 50.0% | |
| !! | TCAGGAAGTGCAGTACCGAT+TGG | + | chr7_2:2203973-2203992 | None:intergenic | 50.0% |
| CGGCGGCAGAAGAATTGTTG+TGG | + | chr7_2:2200694-2200713 | None:intergenic | 55.0% | |
| CCTGCAAAAAAGGTCAGCGG+CGG | + | chr7_2:2200711-2200730 | None:intergenic | 55.0% | |
| AGAGGAAGAAGGAAGGAGCC+TGG | + | chr7_2:2201876-2201895 | None:intergenic | 55.0% | |
| CAAAAAGGGGTTGCGATCCC+AGG | + | chr7_2:2201961-2201980 | None:intergenic | 55.0% | |
| GACACTCAAGGGTGGAGAAC+TGG | - | chr7_2:2203103-2203122 | Msa1044030:intron | 55.0% | |
| GAGGACATTGGACCTGACCC+AGG | + | chr7_2:2199860-2199879 | None:intergenic | 60.0% | |
| !!! | CCGCCGCTGACCTTTTTTGC+AGG | - | chr7_2:2200708-2200727 | Msa1044030:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 2199339 | 2204050 | 2199339 | ID=Msa1044030;Name=Msa1044030 |
| chr7_2 | mRNA | 2199339 | 2204050 | 2199339 | ID=Msa1044030-mRNA-1;Parent=Msa1044030;Name=Msa1044030-mRNA-1;_AED=0.06;_eAED=0.14;_QI=0|0|0|0.8|0.5|0.4|5|0|258 |
| chr7_2 | exon | 2204046 | 2204050 | 2204046 | ID=Msa1044030-mRNA-1:exon:546;Parent=Msa1044030-mRNA-1 |
| chr7_2 | exon | 2203779 | 2203983 | 2203779 | ID=Msa1044030-mRNA-1:exon:545;Parent=Msa1044030-mRNA-1 |
| chr7_2 | exon | 2203693 | 2203762 | 2203693 | ID=Msa1044030-mRNA-1:exon:544;Parent=Msa1044030-mRNA-1 |
| chr7_2 | exon | 2201896 | 2201989 | 2201896 | ID=Msa1044030-mRNA-1:exon:543;Parent=Msa1044030-mRNA-1 |
| chr7_2 | exon | 2199339 | 2199741 | 2199339 | ID=Msa1044030-mRNA-1:exon:542;Parent=Msa1044030-mRNA-1 |
| chr7_2 | CDS | 2204046 | 2204050 | 2204046 | ID=Msa1044030-mRNA-1:cds;Parent=Msa1044030-mRNA-1 |
| chr7_2 | CDS | 2203779 | 2203983 | 2203779 | ID=Msa1044030-mRNA-1:cds;Parent=Msa1044030-mRNA-1 |
| chr7_2 | CDS | 2203693 | 2203762 | 2203693 | ID=Msa1044030-mRNA-1:cds;Parent=Msa1044030-mRNA-1 |
| chr7_2 | CDS | 2201896 | 2201989 | 2201896 | ID=Msa1044030-mRNA-1:cds;Parent=Msa1044030-mRNA-1 |
| chr7_2 | CDS | 2199339 | 2199741 | 2199339 | ID=Msa1044030-mRNA-1:cds;Parent=Msa1044030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
