Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1046540 | RHN43992.1 | 83.946 | 299 | 22 | 5 | 10 | 302 | 9 | 287 | 1.65e-165 | 471 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1046540 | A0A396GS93 | 83.946 | 299 | 22 | 5 | 10 | 302 | 9 | 287 | 7.89e-166 | 471 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1046540 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1046540 | MtrunA17_Chr7g0214511 | 83.946 | 299 | 22 | 5 | 10 | 302 | 9 | 287 | 1.52e-169 | 471 |
| Msa1046540 | MtrunA17_Chr1g0174001 | 60.309 | 194 | 58 | 8 | 118 | 302 | 12 | 195 | 1.88e-63 | 198 |
| Msa1046540 | MtrunA17_Chr1g0169521 | 49.808 | 261 | 83 | 9 | 60 | 302 | 86 | 316 | 1.53e-61 | 197 |
| Msa1046540 | MtrunA17_Chr1g0169561 | 49.624 | 266 | 83 | 12 | 56 | 302 | 83 | 316 | 4.21e-60 | 194 |
| Msa1046540 | MtrunA17_Chr1g0193731 | 47.576 | 330 | 81 | 17 | 16 | 302 | 15 | 295 | 2.63e-58 | 189 |
| Msa1046540 | MtrunA17_Chr1g0180581 | 44.444 | 288 | 84 | 11 | 15 | 302 | 9 | 220 | 4.40e-51 | 167 |
| Msa1046540 | MtrunA17_Chr1g0174871 | 35.907 | 259 | 121 | 11 | 72 | 301 | 42 | 284 | 1.83e-22 | 94.7 |
| Msa1046540 | MtrunA17_Chr1g0174861 | 37.363 | 182 | 88 | 9 | 93 | 268 | 63 | 224 | 2.10e-20 | 88.2 |
| Msa1046540 | MtrunA17_Chr1g0180571 | 78.431 | 51 | 11 | 0 | 247 | 297 | 22 | 72 | 3.71e-19 | 82.0 |
| Msa1046540 | MtrunA17_Chr1g0172861 | 35.055 | 271 | 102 | 15 | 72 | 302 | 42 | 278 | 1.54e-16 | 78.2 |
| Msa1046540 | MtrunA17_Chr1g0172961 | 32.411 | 253 | 101 | 13 | 72 | 284 | 42 | 264 | 1.75e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 48 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAAGGTGTTACTGAATT+AGG | 0.100666 | 7_2:-7033641 | Msa1046540:CDS |
| TGAATCACCGTGGCGCTAAA+AGG | 0.215611 | 7_2:-7033889 | Msa1046540:CDS |
| TCGACGCGGCCGGCGTTTCT+TGG | 0.252455 | 7_2:+7034015 | None:intergenic |
| TTCTTGGTGTTGTAGAATAT+TGG | 0.276502 | 7_2:+7034031 | None:intergenic |
| CTCTTCAATAGCATGATTAG+AGG | 0.355993 | 7_2:+7033673 | None:intergenic |
| ATGAAGGTGTTACTGAATTA+GGG | 0.357850 | 7_2:-7033640 | Msa1046540:CDS |
| TTCTGTTCTTGGTAATCATA+AGG | 0.363019 | 7_2:-7034233 | Msa1046540:CDS |
| ATCGCTCCCTTCAAAATTCC+AGG | 0.381362 | 7_2:-7034384 | Msa1046540:CDS |
| CAAAGCATTGAATGGACATA+AGG | 0.388435 | 7_2:-7034128 | Msa1046540:CDS |
| TATATCTCGCGGAGGTTATG+AGG | 0.390309 | 7_2:-7033933 | Msa1046540:CDS |
| AGTACTTTGAACAGTCAATA+TGG | 0.393472 | 7_2:+7034059 | None:intergenic |
| AAAACTTTCTTGCAATATGA+TGG | 0.405590 | 7_2:-7033864 | Msa1046540:CDS |
| GCATCATTAGTTGTTGAAGA+TGG | 0.412853 | 7_2:+7034304 | None:intergenic |
| ACTTCTAACAAAGCATTGAA+TGG | 0.414800 | 7_2:-7034136 | Msa1046540:CDS |
| ATAGCATGATTAGAGGTAGA+AGG | 0.440842 | 7_2:+7033680 | None:intergenic |
| GAAGATGGTGGTGCAGTTTG+TGG | 0.454649 | 7_2:+7034094 | None:intergenic |
| GAATAGGGTTTGAGTAATCA+AGG | 0.456225 | 7_2:+7034344 | None:intergenic |
| AAAGCATTGAATGGACATAA+GGG | 0.470952 | 7_2:-7034127 | Msa1046540:CDS |
| TTCTTCTTCTTCGACGCGGC+CGG | 0.486419 | 7_2:+7034005 | None:intergenic |
| GAATCACCGTGGCGCTAAAA+GGG | 0.488695 | 7_2:-7033888 | Msa1046540:CDS |
| TAATCAAGGAAACGGAAAGA+AGG | 0.496330 | 7_2:+7034358 | None:intergenic |
| GTCAATATGGCTCTGTTCAA+AGG | 0.497478 | 7_2:+7034072 | None:intergenic |
| TCTTCAACAACTAATGATGC+TGG | 0.499426 | 7_2:-7034301 | Msa1046540:CDS |
| GGAGCGATGATAAACATCAT+TGG | 0.502169 | 7_2:+7034399 | None:intergenic |
| GAAGAGAAGAAGATTAATGA+AGG | 0.510676 | 7_2:-7033656 | Msa1046540:CDS |
| TCAAACATCACAAGATTGCA+AGG | 0.513757 | 7_2:-7033705 | Msa1046540:CDS |
| CTCATGTGATGTTTGCAACA+AGG | 0.516766 | 7_2:-7034164 | Msa1046540:CDS |
| TTGGTGTTGTAGAATATTGG+CGG | 0.527171 | 7_2:+7034034 | None:intergenic |
| TTGAGGTTCAAGATTCCTAA+AGG | 0.528982 | 7_2:-7033737 | Msa1046540:CDS |
| AAGATGGTGGTGCAGTTTGT+GGG | 0.535375 | 7_2:+7034095 | None:intergenic |
| GAAACGGAAAGAAGGGTACC+TGG | 0.540917 | 7_2:+7034366 | None:intergenic |
| TAGCCACAATGAAAAGAAGT+TGG | 0.545096 | 7_2:-7033762 | Msa1046540:CDS |
| GGTTTGAGTAATCAAGGAAA+CGG | 0.550662 | 7_2:+7034350 | None:intergenic |
| TTTGGTTCATGATCATGAGA+AGG | 0.562074 | 7_2:+7034424 | None:intergenic |
| TCATGATCATGAGAAGGAGA+TGG | 0.576941 | 7_2:+7034430 | None:intergenic |
| TGGCTCTGTTCAAAGGAAGA+TGG | 0.582600 | 7_2:+7034079 | None:intergenic |
| AATCAAGGAAACGGAAAGAA+GGG | 0.583538 | 7_2:+7034359 | None:intergenic |
| TCATCTTCAAAATCATCACT+TGG | 0.584649 | 7_2:+7033581 | None:intergenic |
| CAAGGTGTGTTTCTAACAAG+TGG | 0.594003 | 7_2:-7033812 | Msa1046540:CDS |
| ATGAAAAGAAGTTGGTGTTG+AGG | 0.594249 | 7_2:-7033754 | Msa1046540:CDS |
| ACAACGTGAAGAAGATCGTA+TGG | 0.595118 | 7_2:-7034267 | Msa1046540:CDS |
| ATATCTCGCGGAGGTTATGA+GGG | 0.614101 | 7_2:-7033932 | Msa1046540:CDS |
| ACTTTGTTGCATATATCTCG+CGG | 0.675938 | 7_2:-7033944 | Msa1046540:CDS |
| TCTACAACACCAAGAAACGC+CGG | 0.683622 | 7_2:-7034024 | Msa1046540:CDS |
| TATCTTCTTCTTCTTCGACG+CGG | 0.720402 | 7_2:+7034001 | None:intergenic |
| CTCTGTTCAAAGGAAGATGG+TGG | 0.725506 | 7_2:+7034082 | None:intergenic |
| TTGTTGCATATATCTCGCGG+AGG | 0.742758 | 7_2:-7033941 | Msa1046540:CDS |
| AATATCGATGTGAATCACCG+TGG | 0.797456 | 7_2:-7033899 | Msa1046540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTCTTATTCTGTTCT+TGG | - | chr7_2:7033784-7033803 | Msa1046540:CDS | 20.0% |
| !!! | TTTTTTTCTTATTCTGTTCT+TGG | - | chr7_2:7033784-7033803 | Msa1046540:CDS | 20.0% |
| !!! | TGATAAACATCATTGGTTTT+TGG | + | chr7_2:7033625-7033644 | None:intergenic | 25.0% |
| !!! | TTTTGAGTTCATTCTGAATA+GGG | + | chr7_2:7033702-7033721 | None:intergenic | 25.0% |
| !!! | TTTTTGAGTTCATTCTGAAT+AGG | + | chr7_2:7033703-7033722 | None:intergenic | 25.0% |
| ! | AAAACTTTCTTGCAATATGA+TGG | - | chr7_2:7034164-7034183 | Msa1046540:CDS | 25.0% |
| !!! | TGATAAACATCATTGGTTTT+TGG | + | chr7_2:7033625-7033644 | None:intergenic | 25.0% |
| !!! | TTTTGAGTTCATTCTGAATA+GGG | + | chr7_2:7033702-7033721 | None:intergenic | 25.0% |
| !!! | TTTTTGAGTTCATTCTGAAT+AGG | + | chr7_2:7033703-7033722 | None:intergenic | 25.0% |
| ! | AAAACTTTCTTGCAATATGA+TGG | - | chr7_2:7034164-7034183 | Msa1046540:CDS | 25.0% |
| ! | TTCTGTTCTTGGTAATCATA+AGG | - | chr7_2:7033795-7033814 | Msa1046540:CDS | 30.0% |
| !! | ACTTCTAACAAAGCATTGAA+TGG | - | chr7_2:7033892-7033911 | Msa1046540:CDS | 30.0% |
| !! | AAAGCATTGAATGGACATAA+GGG | - | chr7_2:7033901-7033920 | Msa1046540:CDS | 30.0% |
| AGTACTTTGAACAGTCAATA+TGG | + | chr7_2:7033972-7033991 | None:intergenic | 30.0% | |
| !! | TTCTTGGTGTTGTAGAATAT+TGG | + | chr7_2:7034000-7034019 | None:intergenic | 30.0% |
| GTTTGAAAAATCTTGCCTTT+AGG | + | chr7_2:7034309-7034328 | None:intergenic | 30.0% | |
| GAAGAGAAGAAGATTAATGA+AGG | - | chr7_2:7034372-7034391 | Msa1046540:CDS | 30.0% | |
| !! | AATGAAGGTGTTACTGAATT+AGG | - | chr7_2:7034387-7034406 | Msa1046540:CDS | 30.0% |
| !! | ATGAAGGTGTTACTGAATTA+GGG | - | chr7_2:7034388-7034407 | Msa1046540:CDS | 30.0% |
| TCATCTTCAAAATCATCACT+TGG | + | chr7_2:7034450-7034469 | None:intergenic | 30.0% | |
| ! | TTCTGTTCTTGGTAATCATA+AGG | - | chr7_2:7033795-7033814 | Msa1046540:CDS | 30.0% |
| !! | ACTTCTAACAAAGCATTGAA+TGG | - | chr7_2:7033892-7033911 | Msa1046540:CDS | 30.0% |
| !! | AAAGCATTGAATGGACATAA+GGG | - | chr7_2:7033901-7033920 | Msa1046540:CDS | 30.0% |
| AGTACTTTGAACAGTCAATA+TGG | + | chr7_2:7033972-7033991 | None:intergenic | 30.0% | |
| !! | TTCTTGGTGTTGTAGAATAT+TGG | + | chr7_2:7034000-7034019 | None:intergenic | 30.0% |
| GTTTGAAAAATCTTGCCTTT+AGG | + | chr7_2:7034309-7034328 | None:intergenic | 30.0% | |
| GAAGAGAAGAAGATTAATGA+AGG | - | chr7_2:7034372-7034391 | Msa1046540:CDS | 30.0% | |
| !! | AATGAAGGTGTTACTGAATT+AGG | - | chr7_2:7034387-7034406 | Msa1046540:CDS | 30.0% |
| !! | ATGAAGGTGTTACTGAATTA+GGG | - | chr7_2:7034388-7034407 | Msa1046540:CDS | 30.0% |
| TCATCTTCAAAATCATCACT+TGG | + | chr7_2:7034450-7034469 | None:intergenic | 30.0% | |
| ! | TTTGGTTCATGATCATGAGA+AGG | + | chr7_2:7033607-7033626 | None:intergenic | 35.0% |
| AATCAAGGAAACGGAAAGAA+GGG | + | chr7_2:7033672-7033691 | None:intergenic | 35.0% | |
| TAATCAAGGAAACGGAAAGA+AGG | + | chr7_2:7033673-7033692 | None:intergenic | 35.0% | |
| GGTTTGAGTAATCAAGGAAA+CGG | + | chr7_2:7033681-7033700 | None:intergenic | 35.0% | |
| GAATAGGGTTTGAGTAATCA+AGG | + | chr7_2:7033687-7033706 | None:intergenic | 35.0% | |
| GCATCATTAGTTGTTGAAGA+TGG | + | chr7_2:7033727-7033746 | None:intergenic | 35.0% | |
| TCTTCAACAACTAATGATGC+TGG | - | chr7_2:7033727-7033746 | Msa1046540:CDS | 35.0% | |
| !! | CAAAGCATTGAATGGACATA+AGG | - | chr7_2:7033900-7033919 | Msa1046540:CDS | 35.0% |
| !! | TTGGTGTTGTAGAATATTGG+CGG | + | chr7_2:7033997-7034016 | None:intergenic | 35.0% |
| ACTTTGTTGCATATATCTCG+CGG | - | chr7_2:7034084-7034103 | Msa1046540:CDS | 35.0% | |
| TGATGAGAAGAAGAAGAAGA+AGG | - | chr7_2:7034191-7034210 | Msa1046540:CDS | 35.0% | |
| AAGAAGAAGAAGAAGGAACA+AGG | - | chr7_2:7034198-7034217 | Msa1046540:CDS | 35.0% | |
| TAGCCACAATGAAAAGAAGT+TGG | - | chr7_2:7034266-7034285 | Msa1046540:CDS | 35.0% | |
| ! | ACACCAACTTCTTTTCATTG+TGG | + | chr7_2:7034272-7034291 | None:intergenic | 35.0% |
| !! | ATGAAAAGAAGTTGGTGTTG+AGG | - | chr7_2:7034274-7034293 | Msa1046540:CDS | 35.0% |
| TTGAGGTTCAAGATTCCTAA+AGG | - | chr7_2:7034291-7034310 | Msa1046540:CDS | 35.0% | |
| TCAAACATCACAAGATTGCA+AGG | - | chr7_2:7034323-7034342 | Msa1046540:CDS | 35.0% | |
| ATAGCATGATTAGAGGTAGA+AGG | + | chr7_2:7034351-7034370 | None:intergenic | 35.0% | |
| CTCTTCAATAGCATGATTAG+AGG | + | chr7_2:7034358-7034377 | None:intergenic | 35.0% | |
| ! | TTTGGTTCATGATCATGAGA+AGG | + | chr7_2:7033607-7033626 | None:intergenic | 35.0% |
| AATCAAGGAAACGGAAAGAA+GGG | + | chr7_2:7033672-7033691 | None:intergenic | 35.0% | |
| TAATCAAGGAAACGGAAAGA+AGG | + | chr7_2:7033673-7033692 | None:intergenic | 35.0% | |
| GGTTTGAGTAATCAAGGAAA+CGG | + | chr7_2:7033681-7033700 | None:intergenic | 35.0% | |
| GAATAGGGTTTGAGTAATCA+AGG | + | chr7_2:7033687-7033706 | None:intergenic | 35.0% | |
| GCATCATTAGTTGTTGAAGA+TGG | + | chr7_2:7033727-7033746 | None:intergenic | 35.0% | |
| TCTTCAACAACTAATGATGC+TGG | - | chr7_2:7033727-7033746 | Msa1046540:CDS | 35.0% | |
| !! | CAAAGCATTGAATGGACATA+AGG | - | chr7_2:7033900-7033919 | Msa1046540:CDS | 35.0% |
| !! | TTGGTGTTGTAGAATATTGG+CGG | + | chr7_2:7033997-7034016 | None:intergenic | 35.0% |
| ACTTTGTTGCATATATCTCG+CGG | - | chr7_2:7034084-7034103 | Msa1046540:CDS | 35.0% | |
| TGATGAGAAGAAGAAGAAGA+AGG | - | chr7_2:7034191-7034210 | Msa1046540:CDS | 35.0% | |
| AAGAAGAAGAAGAAGGAACA+AGG | - | chr7_2:7034198-7034217 | Msa1046540:CDS | 35.0% | |
| TAGCCACAATGAAAAGAAGT+TGG | - | chr7_2:7034266-7034285 | Msa1046540:CDS | 35.0% | |
| ! | ACACCAACTTCTTTTCATTG+TGG | + | chr7_2:7034272-7034291 | None:intergenic | 35.0% |
| !! | ATGAAAAGAAGTTGGTGTTG+AGG | - | chr7_2:7034274-7034293 | Msa1046540:CDS | 35.0% |
| TTGAGGTTCAAGATTCCTAA+AGG | - | chr7_2:7034291-7034310 | Msa1046540:CDS | 35.0% | |
| TCAAACATCACAAGATTGCA+AGG | - | chr7_2:7034323-7034342 | Msa1046540:CDS | 35.0% | |
| ATAGCATGATTAGAGGTAGA+AGG | + | chr7_2:7034351-7034370 | None:intergenic | 35.0% | |
| CTCTTCAATAGCATGATTAG+AGG | + | chr7_2:7034358-7034377 | None:intergenic | 35.0% | |
| TCATGATCATGAGAAGGAGA+TGG | + | chr7_2:7033601-7033620 | None:intergenic | 40.0% | |
| GGAGCGATGATAAACATCAT+TGG | + | chr7_2:7033632-7033651 | None:intergenic | 40.0% | |
| !! | AGGGTACCTGGAATTTTGAA+GGG | + | chr7_2:7033653-7033672 | None:intergenic | 40.0% |
| !!! | AAGGGTACCTGGAATTTTGA+AGG | + | chr7_2:7033654-7033673 | None:intergenic | 40.0% |
| ACAACGTGAAGAAGATCGTA+TGG | - | chr7_2:7033761-7033780 | Msa1046540:CDS | 40.0% | |
| CTCATGTGATGTTTGCAACA+AGG | - | chr7_2:7033864-7033883 | Msa1046540:CDS | 40.0% | |
| ! | GTCAATATGGCTCTGTTCAA+AGG | + | chr7_2:7033959-7033978 | None:intergenic | 40.0% |
| TATCTTCTTCTTCTTCGACG+CGG | + | chr7_2:7034030-7034049 | None:intergenic | 40.0% | |
| AATATCGATGTGAATCACCG+TGG | - | chr7_2:7034129-7034148 | Msa1046540:CDS | 40.0% | |
| ! | CAAGGTGTGTTTCTAACAAG+TGG | - | chr7_2:7034216-7034235 | Msa1046540:CDS | 40.0% |
| TCATGATCATGAGAAGGAGA+TGG | + | chr7_2:7033601-7033620 | None:intergenic | 40.0% | |
| GGAGCGATGATAAACATCAT+TGG | + | chr7_2:7033632-7033651 | None:intergenic | 40.0% | |
| !! | AGGGTACCTGGAATTTTGAA+GGG | + | chr7_2:7033653-7033672 | None:intergenic | 40.0% |
| !!! | AAGGGTACCTGGAATTTTGA+AGG | + | chr7_2:7033654-7033673 | None:intergenic | 40.0% |
| ACAACGTGAAGAAGATCGTA+TGG | - | chr7_2:7033761-7033780 | Msa1046540:CDS | 40.0% | |
| CTCATGTGATGTTTGCAACA+AGG | - | chr7_2:7033864-7033883 | Msa1046540:CDS | 40.0% | |
| ! | GTCAATATGGCTCTGTTCAA+AGG | + | chr7_2:7033959-7033978 | None:intergenic | 40.0% |
| TATCTTCTTCTTCTTCGACG+CGG | + | chr7_2:7034030-7034049 | None:intergenic | 40.0% | |
| AATATCGATGTGAATCACCG+TGG | - | chr7_2:7034129-7034148 | Msa1046540:CDS | 40.0% | |
| ! | CAAGGTGTGTTTCTAACAAG+TGG | - | chr7_2:7034216-7034235 | Msa1046540:CDS | 40.0% |
| ATCGCTCCCTTCAAAATTCC+AGG | - | chr7_2:7033644-7033663 | Msa1046540:CDS | 45.0% | |
| ! | AAGATGGTGGTGCAGTTTGT+GGG | + | chr7_2:7033936-7033955 | None:intergenic | 45.0% |
| CTCTGTTCAAAGGAAGATGG+TGG | + | chr7_2:7033949-7033968 | None:intergenic | 45.0% | |
| ! | TGGCTCTGTTCAAAGGAAGA+TGG | + | chr7_2:7033952-7033971 | None:intergenic | 45.0% |
| TCTACAACACCAAGAAACGC+CGG | - | chr7_2:7034004-7034023 | Msa1046540:CDS | 45.0% | |
| TTGTTGCATATATCTCGCGG+AGG | - | chr7_2:7034087-7034106 | Msa1046540:CDS | 45.0% | |
| TATATCTCGCGGAGGTTATG+AGG | - | chr7_2:7034095-7034114 | Msa1046540:CDS | 45.0% | |
| ATATCTCGCGGAGGTTATGA+GGG | - | chr7_2:7034096-7034115 | Msa1046540:CDS | 45.0% | |
| ! | GTTTTTCCCTTTTAGCGCCA+CGG | + | chr7_2:7034149-7034168 | None:intergenic | 45.0% |
| ATCGCTCCCTTCAAAATTCC+AGG | - | chr7_2:7033644-7033663 | Msa1046540:CDS | 45.0% | |
| ! | AAGATGGTGGTGCAGTTTGT+GGG | + | chr7_2:7033936-7033955 | None:intergenic | 45.0% |
| CTCTGTTCAAAGGAAGATGG+TGG | + | chr7_2:7033949-7033968 | None:intergenic | 45.0% | |
| ! | TGGCTCTGTTCAAAGGAAGA+TGG | + | chr7_2:7033952-7033971 | None:intergenic | 45.0% |
| TCTACAACACCAAGAAACGC+CGG | - | chr7_2:7034004-7034023 | Msa1046540:CDS | 45.0% | |
| TTGTTGCATATATCTCGCGG+AGG | - | chr7_2:7034087-7034106 | Msa1046540:CDS | 45.0% | |
| TATATCTCGCGGAGGTTATG+AGG | - | chr7_2:7034095-7034114 | Msa1046540:CDS | 45.0% | |
| ATATCTCGCGGAGGTTATGA+GGG | - | chr7_2:7034096-7034115 | Msa1046540:CDS | 45.0% | |
| ! | GTTTTTCCCTTTTAGCGCCA+CGG | + | chr7_2:7034149-7034168 | None:intergenic | 45.0% |
| !! | GAAACGGAAAGAAGGGTACC+TGG | + | chr7_2:7033665-7033684 | None:intergenic | 50.0% |
| ! | GAAGATGGTGGTGCAGTTTG+TGG | + | chr7_2:7033937-7033956 | None:intergenic | 50.0% |
| TGAATCACCGTGGCGCTAAA+AGG | - | chr7_2:7034139-7034158 | Msa1046540:CDS | 50.0% | |
| GAATCACCGTGGCGCTAAAA+GGG | - | chr7_2:7034140-7034159 | Msa1046540:CDS | 50.0% | |
| !! | GAAACGGAAAGAAGGGTACC+TGG | + | chr7_2:7033665-7033684 | None:intergenic | 50.0% |
| ! | GAAGATGGTGGTGCAGTTTG+TGG | + | chr7_2:7033937-7033956 | None:intergenic | 50.0% |
| TGAATCACCGTGGCGCTAAA+AGG | - | chr7_2:7034139-7034158 | Msa1046540:CDS | 50.0% | |
| GAATCACCGTGGCGCTAAAA+GGG | - | chr7_2:7034140-7034159 | Msa1046540:CDS | 50.0% | |
| TTCTTCTTCTTCGACGCGGC+CGG | + | chr7_2:7034026-7034045 | None:intergenic | 55.0% | |
| TTCTTCTTCTTCGACGCGGC+CGG | + | chr7_2:7034026-7034045 | None:intergenic | 55.0% | |
| TCGACGCGGCCGGCGTTTCT+TGG | + | chr7_2:7034016-7034035 | None:intergenic | 70.0% | |
| TCGACGCGGCCGGCGTTTCT+TGG | + | chr7_2:7034016-7034035 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 7033571 | 7034479 | 7033571 | ID=Msa1046540;Name=Msa1046540 |
| chr7_2 | mRNA | 7033571 | 7034479 | 7033571 | ID=Msa1046540-mRNA-1;Parent=Msa1046540;Name=Msa1046540-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|302 |
| chr7_2 | exon | 7033571 | 7034479 | 7033571 | ID=Msa1046540-mRNA-1:exon:1722;Parent=Msa1046540-mRNA-1 |
| chr7_2 | CDS | 7033571 | 7034479 | 7033571 | ID=Msa1046540-mRNA-1:cds;Parent=Msa1046540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
