AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1046560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1046560 MtrunA17_Chr7g0214531 100.000 599 0 0 1 599 1 599 0.0 1258
Msa1046560 MtrunA17_Chr1g0213321 85.572 603 78 2 1 599 79 676 0.0 1105
Msa1046560 MtrunA17_Chr1g0146301 78.869 601 116 3 3 598 89 683 0.0 1019
Msa1046560 MtrunA17_Chr7g0253211 79.595 593 120 1 7 599 294 885 0.0 1018
Msa1046560 MtrunA17_Chr3g0140431 77.796 599 123 2 4 598 5 597 0.0 1010
Msa1046560 MtrunA17_Chr8g0340491 72.987 596 158 3 6 599 97 691 0.0 921
Msa1046560 MtrunA17_Chr1g0166821 39.100 289 157 6 31 316 6 278 4.64e-60 207
Msa1046560 MtrunA17_Chr2g0329981 38.710 279 154 5 37 312 9 273 6.96e-60 207
Msa1046560 MtrunA17_Chr4g0071031 38.351 279 155 5 37 312 9 273 8.02e-60 206
Msa1046560 MtrunA17_Chr2g0299661 37.993 279 156 5 37 312 9 273 2.24e-59 205
Msa1046560 MtrunA17_Chr7g0261501 38.516 283 157 5 37 316 9 277 5.50e-59 204
Msa1046560 MtrunA17_Chr1g0187571 38.754 289 158 6 31 316 6 278 3.83e-58 202
Msa1046560 MtrunA17_Chr1g0183631 37.716 289 161 6 31 316 5 277 1.53e-57 200
Msa1046560 MtrunA17_Chr8g0342821 37.276 279 157 6 37 312 9 272 6.67e-57 199
Msa1046560 MtrunA17_Chr6g0486611 36.268 284 164 5 37 317 9 278 1.62e-55 193
Msa1046560 MtrunA17_Chr8g0390211 36.735 294 166 7 27 317 2 278 5.46e-55 192
Msa1046560 MtrunA17_Chr1g0167261 36.860 293 164 6 29 316 4 280 2.68e-54 188
Msa1046560 MtrunA17_Chr1g0146151 35.439 285 165 6 31 312 5 273 6.24e-53 186
Msa1046560 MtrunA17_Chr3g0140071 35.088 285 166 6 31 312 5 273 8.81e-53 186
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1046560 AT3G13670.1 85.050 602 84 2 1 598 103 702 0.0 1098
Msa1046560 AT2G25760.1 77.537 601 126 4 3 598 76 672 0.0 1011
Msa1046560 AT2G25760.2 77.318 604 125 6 3 598 76 675 0.0 1004
Msa1046560 AT5G18190.2 76.897 593 136 1 7 599 100 691 0.0 994
Msa1046560 AT5G18190.1 76.897 593 136 1 7 599 100 691 0.0 994
Msa1046560 AT3G03940.1 76.728 593 137 1 7 599 110 701 0.0 994
Msa1046560 AT3G03930.1 65.660 265 82 2 343 598 23 287 4.89e-124 367
Msa1046560 AT5G44100.1 38.408 289 159 6 31 316 5 277 1.46e-59 206
Msa1046560 AT5G44100.2 38.408 289 159 6 31 316 5 277 1.46e-59 206
Msa1046560 AT2G19470.1 38.516 283 157 5 37 316 9 277 1.63e-59 205
Msa1046560 AT1G03930.1 38.596 285 156 6 31 312 5 273 1.75e-59 206
Msa1046560 AT3G23340.1 38.754 289 158 6 31 316 5 277 4.58e-59 204
Msa1046560 AT4G14340.2 38.408 289 159 6 31 316 11 283 1.23e-58 201
Msa1046560 AT4G28540.1 38.062 289 160 6 31 316 9 281 1.53e-58 203
Msa1046560 AT4G26100.1 36.749 283 162 5 37 316 9 277 3.67e-58 202
Msa1046560 AT4G14340.1 38.408 289 159 6 31 316 11 283 3.77e-58 202
Msa1046560 AT4G28860.2 37.543 293 163 7 27 316 2 277 3.70e-57 197
Msa1046560 AT4G28860.1 37.543 293 163 7 27 316 2 277 1.47e-56 196
Msa1046560 AT1G04440.1 38.062 289 160 6 31 316 5 277 1.55e-56 198
Msa1046560 AT5G43320.1 38.062 289 160 6 31 316 5 277 1.81e-56 198
Msa1046560 AT4G28880.3 37.884 293 162 7 27 316 2 277 1.85e-56 196
Msa1046560 AT4G28880.2 37.884 293 162 7 27 316 2 277 1.85e-56 196
Msa1046560 AT4G28880.1 37.884 293 162 7 27 316 2 277 1.85e-56 196
Msa1046560 AT4G28880.4 37.884 293 162 7 27 316 2 277 1.85e-56 196
Msa1046560 AT1G72710.1 37.276 279 157 6 37 312 9 272 2.02e-56 197
Msa1046560 AT5G57015.1 36.042 283 164 5 37 316 9 277 2.86e-56 196
Msa1046560 AT5G43320.2 38.062 289 160 6 31 316 5 277 2.96e-56 194
Msa1046560 AT5G43320.3 38.062 289 160 6 31 316 5 277 2.96e-56 194
Msa1046560 AT3G23340.2 39.245 265 151 5 57 316 4 263 1.39e-53 189
Msa1046560 AT4G08800.1 32.509 283 142 6 37 316 9 245 2.56e-42 154

Find 209 sgRNAs with CRISPR-Local

Find 636 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAATTGGTAGGTTGAATT+TGG 0.163094 7_2:-7066831 None:intergenic
CAATCTCTGGGCACTTATTA+TGG 0.176547 7_2:+7071567 Msa1046560:CDS
GATATTTGAGCCTGATAATT+TGG 0.180021 7_2:+7067103 Msa1046560:five_prime_UTR
TAGGTTGAATTTGGAGAATT+AGG 0.195629 7_2:-7066822 None:intergenic
CATCTCTACCTTTGCTTCAT+TGG 0.235235 7_2:-7070743 None:intergenic
TGGCTTCTTGTTCCAATCTC+TGG 0.237696 7_2:+7071554 Msa1046560:CDS
AAAAGAAACCTGAACATATC+AGG 0.258582 7_2:-7069920 None:intergenic
TGAGCACCTTCAGTATTAAT+TGG 0.274374 7_2:-7070483 None:intergenic
TCTTCTCTTACCAAATTATC+AGG 0.281266 7_2:-7067113 None:intergenic
AAACTTGGCAAAGGTGGATT+TGG 0.289497 7_2:+7068207 Msa1046560:CDS
CTTCCTTTATAATGTACTTT+GGG 0.297099 7_2:-7068620 None:intergenic
TGCAAGTGTTCATGCTCATT+TGG 0.304706 7_2:+7070082 Msa1046560:CDS
GGTGGTAATGACCGTCTTAA+TGG 0.307348 7_2:+7068258 Msa1046560:CDS
TTTGTTGGTCGTCGAGTTAC+CGG 0.308181 7_2:+7068237 Msa1046560:CDS
GAATTTGGAGAATTAGGGTT+AGG 0.322608 7_2:-7066816 None:intergenic
AACTCAAGGAAATGTCTAAA+AGG 0.324752 7_2:-7070369 None:intergenic
GTTACCATGGCAAGGTTATC+AGG 0.332076 7_2:+7070175 Msa1046560:CDS
AACCATTATCCCATCGTCTA+TGG 0.333296 7_2:-7074145 None:intergenic
TTTCTTGTTGATCTCGGATT+AGG 0.333361 7_2:+7069756 Msa1046560:CDS
GTCCAAGCTTGTGGGATGTT+TGG 0.336979 7_2:+7068773 Msa1046560:CDS
TCTATAGCTGGGGTTACTAA+TGG 0.339143 7_2:+7071787 Msa1046560:CDS
CTTATTATGGATGCTGGAAC+TGG 0.352603 7_2:+7071580 Msa1046560:CDS
GGCTTCTTGTTCCAATCTCT+GGG 0.354817 7_2:+7071555 Msa1046560:CDS
AATTTGACCTACATTTAGTT+AGG 0.361683 7_2:-7074723 None:intergenic
TTCTTCTCTTGTGCTGTACC+TGG 0.364237 7_2:-7069729 None:intergenic
ATTGGCCGCAGTGCAGGATT+TGG 0.366177 7_2:-7070465 None:intergenic
TACCTTGCTTGCTTGTGCTA+TGG 0.369695 7_2:+7074400 Msa1046560:CDS
CATAATAAGTGCCCAGAGAT+TGG 0.371273 7_2:-7071566 None:intergenic
TCTTCCTTTATAATGTACTT+TGG 0.373082 7_2:-7068621 None:intergenic
GACGATGGGATAATGGTTAC+AGG 0.373311 7_2:+7074150 Msa1046560:CDS
CCCTCTTTGGGTGGTGGATG+TGG 0.374034 7_2:+7074667 Msa1046560:three_prime_UTR
AGCAATGCATGCCACCATTT+CGG 0.376237 7_2:-7069516 None:intergenic
CCGTGATAGCGGCACAAGTT+TGG 0.378481 7_2:-7067043 None:intergenic
ATTTCCAAGCACACATGTTA+AGG 0.378927 7_2:+7074274 Msa1046560:CDS
GGCCACTGCTGGAAGTCGTT+GGG 0.383031 7_2:+7073076 Msa1046560:CDS
AGGTTGAATTTGGAGAATTA+GGG 0.387890 7_2:-7066821 None:intergenic
ACCTTGCTTGCTTGTGCTAT+GGG 0.388384 7_2:+7074401 Msa1046560:CDS
GCAAGTGTTCATGCTCATTT+GGG 0.388698 7_2:+7070083 Msa1046560:CDS
CAGAAGCAGCATAGCATCTC+AGG 0.394079 7_2:-7070339 None:intergenic
AATGTATAAGTTTGTGTGTA+AGG 0.395749 7_2:+7074586 Msa1046560:three_prime_UTR
CTTCTTGTTTATCCATTTGA+AGG 0.400317 7_2:-7073024 None:intergenic
TATTACATTACTTCTATAGC+TGG 0.401862 7_2:+7071775 Msa1046560:CDS
ATCCATAGACGATGGGATAA+TGG 0.409318 7_2:+7074143 Msa1046560:CDS
ATACCCAAAGTACATTATAA+AGG 0.411632 7_2:+7068617 Msa1046560:CDS
GGCTCAAATATCTCAATAAC+CGG 0.418799 7_2:-7067092 None:intergenic
GATATTAGCTTGGAATAGTT+AGG 0.422192 7_2:-7070420 None:intergenic
ATTGATATCCATTGTGTAGC+AGG 0.425137 7_2:-7070704 None:intergenic
ACACATACCCTCTCAGGAAA+AGG 0.427758 7_2:-7067227 None:intergenic
GATAACCTTGCCATGGTAAC+CGG 0.435532 7_2:-7070172 None:intergenic
CTATAGCTGGGGTTACTAAT+GGG 0.437207 7_2:+7071788 Msa1046560:CDS
ACCAGCGCCCTGATATGTTC+AGG 0.437919 7_2:+7069912 Msa1046560:CDS
TTAGGGTTAGGGTTTGATGC+AGG 0.440418 7_2:-7066804 None:intergenic
TTCAAAGTGGAGAGGAAACT+TGG 0.443586 7_2:+7068192 Msa1046560:CDS
GCGAGTCTTTCCCCTTCAAA+TGG 0.445977 7_2:+7073012 Msa1046560:CDS
CACATACCCTCTCAGGAAAA+GGG 0.446418 7_2:-7067226 None:intergenic
TACCCTCCCTCATTTGTAAA+GGG 0.447684 7_2:-7074526 None:intergenic
CGGCATACCTCAGTGGCACC+GGG 0.450194 7_2:-7068282 None:intergenic
GAAGAGGTAGAAGAAATTGA+AGG 0.450955 7_2:+7067131 Msa1046560:five_prime_UTR
GTATTAATTGGCCGCAGTGC+AGG 0.451258 7_2:-7070471 None:intergenic
TCTCTTGTGGTGATGTCAAA+AGG 0.451724 7_2:+7071814 Msa1046560:CDS
TCGGCATACCTCAGTGGCAC+CGG 0.452841 7_2:-7068283 None:intergenic
GTTTCCTGAGTTTCGTCAGC+AGG 0.453762 7_2:-7074236 None:intergenic
TAATACTGAAGGTGCTCAAA+AGG 0.460450 7_2:+7070488 Msa1046560:CDS
TCCTTGTTTGATAGTGTGCT+TGG 0.461993 7_2:+7070441 Msa1046560:CDS
TGTGGAGTCATTGTCGATCT+TGG 0.469974 7_2:+7069538 Msa1046560:CDS
AATCAACGCACACGATGATC+AGG 0.469979 7_2:+7066933 Msa1046560:five_prime_UTR
ATACCCTCCCTCATTTGTAA+AGG 0.470050 7_2:-7074527 None:intergenic
TTCATTGTAGGTATGTGCAT+GGG 0.470805 7_2:+7069673 Msa1046560:intron
AAATTGTTTCTTGTTGATCT+CGG 0.470903 7_2:+7069750 Msa1046560:CDS
CATTGTTCCCTTTACAAATG+AGG 0.474542 7_2:+7074519 Msa1046560:three_prime_UTR
GTGACTTCAATGGCCACTGC+TGG 0.476110 7_2:+7073065 Msa1046560:CDS
ATGTAGGATGTCTGCCGAAA+TGG 0.477227 7_2:+7069502 Msa1046560:intron
ATTACATTACTTCTATAGCT+GGG 0.477779 7_2:+7071776 Msa1046560:CDS
GGAATGGATCATGGAGCAAT+GGG 0.480666 7_2:+7071744 Msa1046560:intron
GTTGTTATGTCACGGAATGC+TGG 0.481715 7_2:+7073101 Msa1046560:CDS
AATTTGGAGAATTAGGGTTA+GGG 0.484069 7_2:-7066815 None:intergenic
GAGAGGTAGATTGAATATTG+AGG 0.484728 7_2:+7070637 Msa1046560:CDS
AGGGTTTCACGTGACTTCAA+TGG 0.485148 7_2:+7073055 Msa1046560:CDS
TGGCAAAGGTGGATTTGGAC+AGG 0.492641 7_2:+7068212 Msa1046560:CDS
TTCCAAACATCCCACAAGCT+TGG 0.493712 7_2:-7068775 None:intergenic
AGAAGAAATTGAAGGGGTGA+TGG 0.494085 7_2:+7067139 Msa1046560:exon
CATAGGACACATACCCTCTC+AGG 0.494559 7_2:-7067233 None:intergenic
ATTGTTCCCTTTACAAATGA+GGG 0.495251 7_2:+7074520 Msa1046560:three_prime_UTR
AACAGTAAAGGTTGCAACTA+CGG 0.495338 7_2:+7068408 Msa1046560:CDS
CGTCTATGGATTCCCTCGCT+AGG 0.500795 7_2:-7074131 None:intergenic
CGCTATTTGACAACAATGAA+AGG 0.502036 7_2:-7074442 None:intergenic
AGGAAATGTCTAAAAGGAGT+AGG 0.502905 7_2:-7070363 None:intergenic
GGAGCAGGACGACGAAGTAC+TGG 0.504517 7_2:-7067003 None:intergenic
ATCAAACAAGGATATTAGCT+TGG 0.504809 7_2:-7070430 None:intergenic
TGGCCACTGCTGGAAGTCGT+TGG 0.506701 7_2:+7073075 Msa1046560:CDS
GAATGCTGGATTCAGTGATC+AGG 0.508380 7_2:+7073115 Msa1046560:CDS
AAGAGGTAGAAGAAATTGAA+GGG 0.508434 7_2:+7067132 Msa1046560:five_prime_UTR
GAACACATGCAGTAGATTTG+TGG 0.509091 7_2:-7066972 None:intergenic
CATGCTTGGTCCAAGCTTGT+GGG 0.512086 7_2:+7068765 Msa1046560:CDS
TTCTTGTTTATCCATTTGAA+GGG 0.516197 7_2:-7073023 None:intergenic
TTCCTCTCCACTTTGAACAT+AGG 0.519828 7_2:-7068186 None:intergenic
TTGACCTACATTTAGTTAGG+AGG 0.521168 7_2:-7074720 None:intergenic
AGTACTTCGTCGTCCTGCTC+CGG 0.521539 7_2:+7067005 Msa1046560:five_prime_UTR
AGCACCCTTGGTGGAAGTCA+TGG 0.521686 7_2:+7068593 Msa1046560:intron
TAAACAAGAAGTGGAGAGAA+GGG 0.522540 7_2:+7073036 Msa1046560:CDS
TGGGCACTTATTATGGATGC+TGG 0.523125 7_2:+7071574 Msa1046560:CDS
TCACAGCAACTGCAGCTACA+TGG 0.524987 7_2:+7074174 Msa1046560:CDS
AGGTGTTGCTCAAGAGGATG+AGG 0.525431 7_2:+7067193 Msa1046560:CDS
AGCACAAGCAAGCAAGGTAA+AGG 0.526556 7_2:-7074396 None:intergenic
AAGTGGAGAGACACCTCCAC+TGG 0.527530 7_2:+7069872 Msa1046560:CDS
TCAAATGGATAAACAAGAAG+TGG 0.528244 7_2:+7073027 Msa1046560:CDS
CCAAACTTGTGCCGCTATCA+CGG 0.529396 7_2:+7067043 Msa1046560:five_prime_UTR
CCACATCCACCACCCAAAGA+GGG 0.531782 7_2:-7074667 None:intergenic
TTCTTTCTAGGAATGGATCA+TGG 0.532786 7_2:+7071735 Msa1046560:intron
GTTCATTGTAGGTATGTGCA+TGG 0.539598 7_2:+7069672 Msa1046560:intron
CAAACCTTAACATGTGTGCT+TGG 0.539899 7_2:-7074278 None:intergenic
ACCTGAACATATCAGGGCGC+TGG 0.539965 7_2:-7069913 None:intergenic
GGTGGTTTGAGTGCTAATAA+AGG 0.540456 7_2:+7067173 Msa1046560:CDS
TAATAAAGGTGTTGCTCAAG+AGG 0.543294 7_2:+7067187 Msa1046560:CDS
CTTTCATTGTTGTCAAATAG+CGG 0.543837 7_2:+7074443 Msa1046560:three_prime_UTR
TACTAATGGGAGCTCTCTTG+TGG 0.544290 7_2:+7071801 Msa1046560:CDS
TTCATAAAGGCCGGTTACCA+TGG 0.544662 7_2:+7070162 Msa1046560:CDS
ATGCAGGTTATGGACATGCT+TGG 0.546212 7_2:+7068751 Msa1046560:intron
ACGAAACTCAGGAAACTCTT+CGG 0.546872 7_2:+7074243 Msa1046560:CDS
GTCTATGGATTCCCTCGCTA+GGG 0.547554 7_2:-7074130 None:intergenic
GAAGAAATTGAAGGGGTGAT+GGG 0.548399 7_2:+7067140 Msa1046560:exon
GACCCAAAGGTTCAAGTAGG+AGG 0.548405 7_2:+7068159 Msa1046560:intron
ATAAACAAGAAGTGGAGAGA+AGG 0.549123 7_2:+7073035 Msa1046560:CDS
GGATTCCCTCGCTAGGGTAG+AGG 0.550492 7_2:-7074124 None:intergenic
TTTGAACATAGAAACAGTAA+AGG 0.551586 7_2:+7068396 Msa1046560:CDS
AGGAATGGATCATGGAGCAA+TGG 0.552979 7_2:+7071743 Msa1046560:intron
GGAAATGTCTAAAAGGAGTA+GGG 0.553070 7_2:-7070362 None:intergenic
TGGGATGTTTGGAATACCAC+AGG 0.555511 7_2:+7068784 Msa1046560:CDS
AAGACCTGCTGACGAAACTC+AGG 0.556055 7_2:+7074232 Msa1046560:CDS
TTTGCCTCCTAACTAAATGT+AGG 0.557511 7_2:+7074716 Msa1046560:three_prime_UTR
TCTTGGAGAAGATGCACTCA+AGG 0.557515 7_2:+7069555 Msa1046560:CDS
CACAGCAACTGCAGCTACAT+GGG 0.559415 7_2:+7074175 Msa1046560:CDS
GAGAGGAAACTTGGCAAAGG+TGG 0.562906 7_2:+7068201 Msa1046560:CDS
GCTATTTGACAACAATGAAA+GGG 0.565703 7_2:-7074441 None:intergenic
ACATGCTTGGTCCAAGCTTG+TGG 0.566277 7_2:+7068764 Msa1046560:CDS
AAGCCACACAGCTAATAAGA+AGG 0.568966 7_2:-7071537 None:intergenic
TTGTACACTTGCCACTCGTA+AGG 0.569716 7_2:-7068435 None:intergenic
AATGACCGTCTTAATGGCCC+CGG 0.574417 7_2:+7068264 Msa1046560:CDS
TACACTTGCCACTCGTAAGG+AGG 0.576490 7_2:-7068432 None:intergenic
GCCACATCCACCACCCAAAG+AGG 0.576647 7_2:-7074668 None:intergenic
TTTGACCCAAAGGTTCAAGT+AGG 0.576801 7_2:+7068156 Msa1046560:intron
TGTTTGGAATACCACAGGCC+AGG 0.580670 7_2:+7068789 Msa1046560:CDS
GTTGGGGTGTTGTTATGTCA+CGG 0.581602 7_2:+7073093 Msa1046560:CDS
TGATAATTTGGTAAGAGAAG+AGG 0.582228 7_2:+7067115 Msa1046560:five_prime_UTR
TCATGTTCACTACAAACTCA+AGG 0.582669 7_2:-7070383 None:intergenic
GCCCATAGCACAAGCAAGCA+AGG 0.584968 7_2:-7074402 None:intergenic
TTCCCTTTACAAATGAGGGA+GGG 0.585760 7_2:+7074524 Msa1046560:three_prime_UTR
GGGGTGATGGGTGATGAAAG+TGG 0.587284 7_2:+7067152 Msa1046560:exon
TAATGGCCCCGGTGCCACTG+AGG 0.587700 7_2:+7068275 Msa1046560:CDS
TATCATTACAATGTAGCGGA+TGG 0.588065 7_2:+7071475 Msa1046560:CDS
TGGCACCGGGGCCATTAAGA+CGG 0.592504 7_2:-7068269 None:intergenic
AGAGGTAGAAGAAATTGAAG+GGG 0.594831 7_2:+7067133 Msa1046560:five_prime_UTR
TTCAACATGCTGCCCAGTGG+AGG 0.595156 7_2:-7069885 None:intergenic
CAAGAATGCCAATGAAGCAA+AGG 0.595613 7_2:+7070735 Msa1046560:CDS
CTTGGAGAAGATGCACTCAA+GGG 0.598220 7_2:+7069556 Msa1046560:CDS
CGGCCTTCTTATTAGCTGTG+TGG 0.598415 7_2:+7071534 Msa1046560:CDS
TTGTCCATCGCGGATAATAG+CGG 0.598887 7_2:-7074496 None:intergenic
CTGCGGCCAATTAATACTGA+AGG 0.599700 7_2:+7070477 Msa1046560:CDS
CGAGGGAATCCATAGACGAT+GGG 0.602040 7_2:+7074136 Msa1046560:CDS
AAAGAAACCTGAACATATCA+GGG 0.602522 7_2:-7069919 None:intergenic
TACCAGGTCGGGCAAAAGAG+AGG 0.609022 7_2:+7070620 Msa1046560:intron
GTTCCCTTTACAAATGAGGG+AGG 0.610675 7_2:+7074523 Msa1046560:three_prime_UTR
ATTAAGACGGTCATTACCAC+CGG 0.611458 7_2:-7068256 None:intergenic
GCGAGGGAATCCATAGACGA+TGG 0.611468 7_2:+7074135 Msa1046560:CDS
GATTTCCTCTACCCTAGCGA+GGG 0.615108 7_2:+7074119 Msa1046560:CDS
TCTTGTTTATCCATTTGAAG+GGG 0.615159 7_2:-7073022 None:intergenic
TGATTTCCTCTACCCTAGCG+AGG 0.615622 7_2:+7074118 Msa1046560:CDS
CAAACCGCTATTATCCGCGA+TGG 0.616181 7_2:+7074492 Msa1046560:three_prime_UTR
CGCCTATGTTCAAAGTGGAG+AGG 0.617102 7_2:+7068184 Msa1046560:CDS
ACCCCAACGACTTCCAGCAG+TGG 0.622356 7_2:-7073078 None:intergenic
CACATCCACCACCCAAAGAG+GGG 0.623177 7_2:-7074666 None:intergenic
TTATACTCACGCCTGGCCTG+TGG 0.625190 7_2:-7068800 None:intergenic
TCATTGTAGGTATGTGCATG+GGG 0.626331 7_2:+7069674 Msa1046560:intron
TTACATTACTTCTATAGCTG+GGG 0.629898 7_2:+7071777 Msa1046560:CDS
TATTCCATGACTTCCACCAA+GGG 0.633471 7_2:-7068597 None:intergenic
ACATACCCTCTCAGGAAAAG+GGG 0.634258 7_2:-7067225 None:intergenic
AGCACCTGATAACCTTGCCA+TGG 0.635229 7_2:-7070179 None:intergenic
TTGGAGAAGATGCACTCAAG+GGG 0.638893 7_2:+7069557 Msa1046560:CDS
AAAGGCCGGTTACCATGGCA+AGG 0.640441 7_2:+7070167 Msa1046560:CDS
ACACTTGCCACTCGTAAGGA+GGG 0.641152 7_2:-7068431 None:intergenic
ACAAGGAGAATATTACGTGA+TGG 0.641400 7_2:+7068643 Msa1046560:CDS
ACATCCACCACCCAAAGAGG+GGG 0.643732 7_2:-7074665 None:intergenic
TAGCGCAACATGTAGAGCGA+GGG 0.645395 7_2:+7071503 Msa1046560:CDS
GCCACTGCTGGAAGTCGTTG+GGG 0.646395 7_2:+7073077 Msa1046560:CDS
GTAGAGCGAGGGATTGCAGA+CGG 0.650118 7_2:+7071514 Msa1046560:CDS
AGTGGAGAGACACCTCCACT+GGG 0.650761 7_2:+7069873 Msa1046560:CDS
TCCAAGCACACTATCAAACA+AGG 0.651722 7_2:-7070442 None:intergenic
GTGGAGAGGAAACTTGGCAA+AGG 0.654106 7_2:+7068198 Msa1046560:CDS
TAGGATGTCTGCCGAAATGG+TGG 0.657696 7_2:+7069505 Msa1046560:intron
CTAGCGCAACATGTAGAGCG+AGG 0.658446 7_2:+7071502 Msa1046560:CDS
GTACATTATAAAGGAAGACA+AGG 0.658821 7_2:+7068626 Msa1046560:CDS
GTTGGTCGTCGAGTTACCGG+TGG 0.658919 7_2:+7068240 Msa1046560:CDS
GGTGTTGCTCAAGAGGATGA+GGG 0.659331 7_2:+7067194 Msa1046560:CDS
TAGGTATCATTACAATGTAG+CGG 0.659418 7_2:+7071471 Msa1046560:intron
AGCGGCTTGTTGTAGCGTAG+CGG 0.661952 7_2:+7074461 Msa1046560:three_prime_UTR
AATGGTGGCATGCATTGCTG+TGG 0.668208 7_2:+7069520 Msa1046560:CDS
CTCTTATATTAAGCAAACCG+AGG 0.669496 7_2:+7074207 Msa1046560:CDS
GTATTCCATGACTTCCACCA+AGG 0.669569 7_2:-7068598 None:intergenic
AGGTTCGCCTATGTTCAAAG+TGG 0.676871 7_2:+7068179 Msa1046560:CDS
ATATTCAACATGCTGCCCAG+TGG 0.679289 7_2:-7069888 None:intergenic
CAACCCTCGGCATACCTCAG+TGG 0.689534 7_2:-7068289 None:intergenic
GGGAACAATGTTGTCCATCG+CGG 0.696225 7_2:-7074506 None:intergenic
ACTACGGCCCTCCTTACGAG+TGG 0.697469 7_2:+7068424 Msa1046560:CDS
GGCATACCTCAGTGGCACCG+GGG 0.710860 7_2:-7068281 None:intergenic
TGGAGAAGATGCACTCAAGG+GGG 0.711646 7_2:+7069558 Msa1046560:CDS
CACATGCAGTAGATTTGTGG+CGG 0.728618 7_2:-7066969 None:intergenic
GTGATGGGTGATGAAAGTGG+TGG 0.743174 7_2:+7067155 Msa1046560:exon
AACTTGTGCCGCTATCACGG+CGG 0.760975 7_2:+7067046 Msa1046560:five_prime_UTR
TTGGACCAAATCCTGCACTG+CGG 0.818000 7_2:+7070460 Msa1046560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCATGTTTTTTTTTTTTTT+TGG + chr7_2:7067293-7067312 Msa1046560:intron 10.0%
!! TAGAATGAATTTATTATTTA+TGG + chr7_2:7067444-7067463 Msa1046560:intron 10.0%
!! CATTAAAAAAAATAGTTAAT+TGG - chr7_2:7068715-7068734 None:intergenic 10.0%
!!! TGTCTTTTTTTTTTTTTTAA+TGG + chr7_2:7069451-7069470 Msa1046560:intron 10.0%
!!! TTTAAAGTTAAATCATAATA+AGG - chr7_2:7070875-7070894 None:intergenic 10.0%
!! ATTATATCATATCATATATT+AGG - chr7_2:7073265-7073284 None:intergenic 10.0%
!! TAATATATGATATGATATAA+TGG + chr7_2:7073264-7073283 Msa1046560:intron 10.0%
!! GAAAAAAATAAATAATTGGT+AGG - chr7_2:7066844-7066863 None:intergenic 15.0%
!!! TGTTTTTTTTTTTTTTTGGT+TGG + chr7_2:7067297-7067316 Msa1046560:intron 15.0%
!! TATAGATTTATTGATATCTA+TGG + chr7_2:7067496-7067515 Msa1046560:intron 15.0%
!! TATAGATTTATTGATATCTA+TGG + chr7_2:7067496-7067515 Msa1046560:intron 15.0%
!! TATAAAAATATGTAATCAGT+AGG + chr7_2:7067714-7067733 Msa1046560:intron 15.0%
!!! TAATTCATTGCATATTTTTT+GGG - chr7_2:7067928-7067947 None:intergenic 15.0%
!!! ATAATTCATTGCATATTTTT+TGG - chr7_2:7067929-7067948 None:intergenic 15.0%
!! ATTATCATTATATTATATGC+AGG + chr7_2:7068735-7068754 Msa1046560:intron 15.0%
!! AATATACAATCAATATGTAA+CGG - chr7_2:7068877-7068896 None:intergenic 15.0%
!! TTTCTTTGTTAAGATTATAT+TGG + chr7_2:7068903-7068922 Msa1046560:intron 15.0%
!!! AATTTTGTTTTTGTTTTTAC+CGG + chr7_2:7069806-7069825 Msa1046560:intron 15.0%
!!! TCTTTTTCACTTTTTTTATT+AGG + chr7_2:7069998-7070017 Msa1046560:intron 15.0%
!!! CTTTTTCACTTTTTTTATTA+GGG + chr7_2:7069999-7070018 Msa1046560:intron 15.0%
!!! TATATTTTTAATTTTTGCAG+AGG + chr7_2:7070047-7070066 Msa1046560:intron 15.0%
!!! TGTTTTTAATTTCTTTGATA+GGG + chr7_2:7070270-7070289 Msa1046560:intron 15.0%
!! TGATTTACTTAGTTAATATA+CGG + chr7_2:7071235-7071254 Msa1046560:intron 15.0%
!!! ATGGTAAAAAAACATTTTTA+GGG - chr7_2:7071999-7072018 None:intergenic 15.0%
!!! AATGGTAAAAAAACATTTTT+AGG - chr7_2:7072000-7072019 None:intergenic 15.0%
!!! ATTTGTTATATTAGTGTTAT+GGG - chr7_2:7073878-7073897 None:intergenic 15.0%
!!! AATTTGTTATATTAGTGTTA+TGG - chr7_2:7073879-7073898 None:intergenic 15.0%
!!! CAAATTATTTAATTTCAGAA+AGG - chr7_2:7073956-7073975 None:intergenic 15.0%
!!! GTCAAATTTTAAAATTGTTT+CGG + chr7_2:7074738-7074757 Msa1046560:three_prime_UTR 15.0%
!!! AAAAGAGTATTTATTTTGTA+TGG + chr7_2:7074788-7074807 Msa1046560:three_prime_UTR 15.0%
!! ATAGAGAAGAAAAAATTGAA+AGG - chr7_2:7066874-7066893 None:intergenic 20.0%
!! AAACTTAACCAAACATAATT+AGG - chr7_2:7067695-7067714 None:intergenic 20.0%
!! CTTTACTATGAAATTCTAAT+GGG - chr7_2:7067770-7067789 None:intergenic 20.0%
!! TCTTTACTATGAAATTCTAA+TGG - chr7_2:7067771-7067790 None:intergenic 20.0%
!! AATTGCAGTATATTGTAAAT+TGG + chr7_2:7068500-7068519 Msa1046560:intron 20.0%
!! AAAAAATAGTTAATTGGCTA+AGG - chr7_2:7068709-7068728 None:intergenic 20.0%
!! ATTATATTATATGCAGGTTA+TGG + chr7_2:7068741-7068760 Msa1046560:intron 20.0%
!!! TAACTAATCTTGTTTTAGTT+TGG - chr7_2:7068992-7069011 None:intergenic 20.0%
!!! AGATTAGTTATATGTTGTAT+AGG + chr7_2:7069002-7069021 Msa1046560:intron 20.0%
!! ATGATTTATGTAGAACATTA+TGG + chr7_2:7069048-7069067 Msa1046560:intron 20.0%
!! ATTCAAAGAATTTACTTGAA+TGG - chr7_2:7069252-7069271 None:intergenic 20.0%
!! AATGGAAAAATAAGATATAG+AGG - chr7_2:7069358-7069377 None:intergenic 20.0%
!! AAATCAATATACCAAACTAA+AGG - chr7_2:7069617-7069636 None:intergenic 20.0%
!! TTGTAAGAATAAAAAGAAAG+GGG - chr7_2:7069832-7069851 None:intergenic 20.0%
!! CTTGTAAGAATAAAAAGAAA+GGG - chr7_2:7069833-7069852 None:intergenic 20.0%
!! TTAAGAAAATGTTTGAAGAA+AGG - chr7_2:7069959-7069978 None:intergenic 20.0%
!!! AACATTTTCTTAATTTCTAC+TGG + chr7_2:7069966-7069985 Msa1046560:intron 20.0%
!! TAAAAATATCTAACATCTTG+AGG + chr7_2:7070022-7070041 Msa1046560:intron 20.0%
!! AGATTAAAACAAACATGTAA+TGG - chr7_2:7070251-7070270 None:intergenic 20.0%
!!! CTGTTTTTAATTTCTTTGAT+AGG + chr7_2:7070269-7070288 Msa1046560:intron 20.0%
!! GATTTACTTAGTTAATATAC+GGG + chr7_2:7071236-7071255 Msa1046560:intron 20.0%
!!! ACTTTTTTAGTTAGGTAATT+TGG + chr7_2:7071964-7071983 Msa1046560:intron 20.0%
!!! CTTTTTTAGTTAGGTAATTT+GGG + chr7_2:7071965-7071984 Msa1046560:intron 20.0%
!!! ATGTTTTTTTACCATTAGTA+TGG + chr7_2:7072004-7072023 Msa1046560:intron 20.0%
!! AAACTATAAGGAAAACTATT+AGG + chr7_2:7072314-7072333 Msa1046560:intron 20.0%
!!! ATAAGTAGCATATTTTCATT+TGG + chr7_2:7072732-7072751 Msa1046560:intron 20.0%
!!! AATTTGAAATTCTATTCACA+TGG + chr7_2:7072758-7072777 Msa1046560:intron 20.0%
!! TATTAAGAAATTGCAATTGT+AGG + chr7_2:7073746-7073765 Msa1046560:intron 20.0%
!! ATAACAAATTGAGTTTAAAG+TGG + chr7_2:7073889-7073908 Msa1046560:intron 20.0%
!!! TAACAAATTGAGTTTAAAGT+GGG + chr7_2:7073890-7073909 Msa1046560:intron 20.0%
!! GAAAAAAAAAAATTAAGCCA+AGG - chr7_2:7073934-7073953 None:intergenic 20.0%
!!! TGAGAAAAATAACTTTTTGA+AGG - chr7_2:7074337-7074356 None:intergenic 20.0%
!! AATAATTGGTAGGTTGAATT+TGG - chr7_2:7066834-7066853 None:intergenic 25.0%
! GAAAAATTGAACAAACTCAT+AGG - chr7_2:7067253-7067272 None:intergenic 25.0%
!!! TGAGTTTGTTCAATTTTTCA+TGG + chr7_2:7067254-7067273 Msa1046560:intron 25.0%
! CATTTAGTGTGTTAATTTCA+CGG - chr7_2:7067337-7067356 None:intergenic 25.0%
!!! TATGGTAACTTGATTTTGAT+CGG + chr7_2:7067462-7067481 Msa1046560:intron 25.0%
! TTTAGAAATCGGATAAATGT+TGG + chr7_2:7067524-7067543 Msa1046560:intron 25.0%
! TAGGTGTTTATCAATCAAAT+TGG - chr7_2:7067676-7067695 None:intergenic 25.0%
! GATAAACACCTAATTATGTT+TGG + chr7_2:7067684-7067703 Msa1046560:intron 25.0%
! AGAATTTCATAGTAAAGAGA+TGG + chr7_2:7067773-7067792 Msa1046560:intron 25.0%
!! ATTTTTGAATGATGTAACCA+TGG + chr7_2:7068079-7068098 Msa1046560:intron 25.0%
! AAGCACATATATATTAACCA+TGG - chr7_2:7068099-7068118 None:intergenic 25.0%
!! TTGCTATCTTTTCATATTTC+AGG + chr7_2:7068362-7068381 Msa1046560:intron 25.0%
! TTTGAACATAGAAACAGTAA+AGG + chr7_2:7068396-7068415 Msa1046560:CDS 25.0%
! ATACCCAAAGTACATTATAA+AGG + chr7_2:7068617-7068636 Msa1046560:CDS 25.0%
! CTTCCTTTATAATGTACTTT+GGG - chr7_2:7068623-7068642 None:intergenic 25.0%
! TCTTCCTTTATAATGTACTT+TGG - chr7_2:7068624-7068643 None:intergenic 25.0%
! GTGAAATGAAATGATATACA+AGG - chr7_2:7068687-7068706 None:intergenic 25.0%
! TTAATTTCTTCCATATGACT+AGG + chr7_2:7068950-7068969 Msa1046560:intron 25.0%
! TATTTAGTTACCTAGTCATA+TGG - chr7_2:7068963-7068982 None:intergenic 25.0%
! TTAGTTATATGTTGTATAGG+TGG + chr7_2:7069005-7069024 Msa1046560:intron 25.0%
! TACATAATTAATGCACAAAG+CGG - chr7_2:7069289-7069308 None:intergenic 25.0%
! CTTAGATATAACAATTGTGA+AGG - chr7_2:7069316-7069335 None:intergenic 25.0%
!! AAAGGGAGTATATTAGTTAT+TGG - chr7_2:7069399-7069418 None:intergenic 25.0%
!! TGATTGTCTTTTGAATATGT+AGG + chr7_2:7069486-7069505 Msa1046560:intron 25.0%
!!! TGATTTAGTTTTGAGTTTTC+TGG + chr7_2:7069631-7069650 Msa1046560:intron 25.0%
!! AAATTGTTTCTTGTTGATCT+CGG + chr7_2:7069750-7069769 Msa1046560:CDS 25.0%
! CCTTGTAAGAATAAAAAGAA+AGG - chr7_2:7069834-7069853 None:intergenic 25.0%
!! CCTTTCTTTTTATTCTTACA+AGG + chr7_2:7069831-7069850 Msa1046560:intron 25.0%
!!! TTTTATTTTCAGCAACAAAG+TGG + chr7_2:7069855-7069874 Msa1046560:intron 25.0%
!!! ACACTCATTTTTCTTCATAA+AGG + chr7_2:7070149-7070168 Msa1046560:CDS 25.0%
! ATACTGGATGAGAATAAAAA+AGG - chr7_2:7070209-7070228 None:intergenic 25.0%
!! TTATCACGCTTTTAAACTTT+TGG + chr7_2:7070549-7070568 Msa1046560:intron 25.0%
!! TATCACGCTTTTAAACTTTT+GGG + chr7_2:7070550-7070569 Msa1046560:intron 25.0%
! ATTTGGGAAACAAATGATTA+TGG - chr7_2:7070593-7070612 None:intergenic 25.0%
! TGGTCAAATTAATGAAACAT+GGG - chr7_2:7070782-7070801 None:intergenic 25.0%
! TTGGTCAAATTAATGAAACA+TGG - chr7_2:7070783-7070802 None:intergenic 25.0%
!! GTTTCATTAATTTGACCAAT+TGG + chr7_2:7070784-7070803 Msa1046560:intron 25.0%
! GAATCTATGTTACATAAGTA+CGG + chr7_2:7070913-7070932 Msa1046560:intron 25.0%
! AATCTATGTTACATAAGTAC+GGG + chr7_2:7070914-7070933 Msa1046560:intron 25.0%
! TTGTGTTTATTTATCTGACT+TGG + chr7_2:7071344-7071363 Msa1046560:intron 25.0%
! TGTGTTTATTTATCTGACTT+GGG + chr7_2:7071345-7071364 Msa1046560:intron 25.0%
!!! GTTTTGTTATCATGATGTTT+TGG + chr7_2:7071423-7071442 Msa1046560:intron 25.0%
! TTAACCTTGTGTAAGAAAAA+AGG - chr7_2:7071634-7071653 None:intergenic 25.0%
! AAGTTTCATCAACTGAAAAT+AGG - chr7_2:7071699-7071718 None:intergenic 25.0%
! TATTACATTACTTCTATAGC+TGG + chr7_2:7071775-7071794 Msa1046560:CDS 25.0%
! ATTACATTACTTCTATAGCT+GGG + chr7_2:7071776-7071795 Msa1046560:CDS 25.0%
! GATAAAAATATCATTCATCG+TGG - chr7_2:7071909-7071928 None:intergenic 25.0%
! TAGAAAAGATGGTAGAAAAT+AGG + chr7_2:7072185-7072204 Msa1046560:intron 25.0%
!! GTTTTCCTTATAGTTTTTCT+AGG - chr7_2:7072310-7072329 None:intergenic 25.0%
! AACTATTAGGAAAGATTTAG+AGG + chr7_2:7072327-7072346 Msa1046560:intron 25.0%
! AATTTCCCATTTATTGTAGA+GGG - chr7_2:7072581-7072600 None:intergenic 25.0%
! TAATTTCCCATTTATTGTAG+AGG - chr7_2:7072582-7072601 None:intergenic 25.0%
!!! TCCCTTTTTTAATACTATAG+AGG + chr7_2:7072908-7072927 Msa1046560:intron 25.0%
! CCCTCTATAGTATTAAAAAA+GGG - chr7_2:7072912-7072931 None:intergenic 25.0%
!!! CCCTTTTTTAATACTATAGA+GGG + chr7_2:7072909-7072928 Msa1046560:intron 25.0%
! TCCCTCTATAGTATTAAAAA+AGG - chr7_2:7072913-7072932 None:intergenic 25.0%
!! TTCTTGTTTATCCATTTGAA+GGG - chr7_2:7073026-7073045 None:intergenic 25.0%
!! GTACACAACATTTTGAATAA+AGG - chr7_2:7073213-7073232 None:intergenic 25.0%
!! GTACACAACATTTTGAATAA+AGG - chr7_2:7073213-7073232 None:intergenic 25.0%
! TGAGTATTACTATTATCACA+TGG + chr7_2:7073351-7073370 Msa1046560:intron 25.0%
! TAAATTCTATCGAACTTTGT+TGG - chr7_2:7073454-7073473 None:intergenic 25.0%
!! GCTAGAAAATAGGTTAATTT+TGG - chr7_2:7073478-7073497 None:intergenic 25.0%
!!! AATTAACCTATTTTCTAGCT+TGG + chr7_2:7073479-7073498 Msa1046560:intron 25.0%
! GATAAGAGTTTATAAAGATG+AGG - chr7_2:7073554-7073573 None:intergenic 25.0%
!!! TTGGGTTTTTTTTCTCAATA+TGG + chr7_2:7073602-7073621 Msa1046560:intron 25.0%
!!! ATGGTTATTGATTTGTTGTA+TGG + chr7_2:7073621-7073640 Msa1046560:intron 25.0%
!! TCAAAACAATTCTTGTTTGT+TGG + chr7_2:7073688-7073707 Msa1046560:intron 25.0%
! TACTGATCTACTTTGATATT+TGG + chr7_2:7073808-7073827 Msa1046560:intron 25.0%
! TTGATTCTGTTTATGTTTAC+AGG + chr7_2:7074357-7074376 Msa1046560:intron 25.0%
! GTTTATGTTTACAGGAAAAA+TGG + chr7_2:7074365-7074384 Msa1046560:intron 25.0%
! AATGTATAAGTTTGTGTGTA+AGG + chr7_2:7074586-7074605 Msa1046560:three_prime_UTR 25.0%
! AATTTGACCTACATTTAGTT+AGG - chr7_2:7074726-7074745 None:intergenic 25.0%
AATTTGGAGAATTAGGGTTA+GGG - chr7_2:7066818-7066837 None:intergenic 30.0%
AGGTTGAATTTGGAGAATTA+GGG - chr7_2:7066824-7066843 None:intergenic 30.0%
! TAGGTTGAATTTGGAGAATT+AGG - chr7_2:7066825-7066844 None:intergenic 30.0%
AAAAAAAGAGCTGAAGAAAC+CGG + chr7_2:7067073-7067092 Msa1046560:five_prime_UTR 30.0%
GATATTTGAGCCTGATAATT+TGG + chr7_2:7067103-7067122 Msa1046560:five_prime_UTR 30.0%
TCTTCTCTTACCAAATTATC+AGG - chr7_2:7067116-7067135 None:intergenic 30.0%
TGATAATTTGGTAAGAGAAG+AGG + chr7_2:7067115-7067134 Msa1046560:five_prime_UTR 30.0%
AAGAGGTAGAAGAAATTGAA+GGG + chr7_2:7067132-7067151 Msa1046560:five_prime_UTR 30.0%
!! GATTTTGATCGGATAAATGT+TGG + chr7_2:7067473-7067492 Msa1046560:intron 30.0%
CTATGGAGAAGTTTAGAAAT+CGG + chr7_2:7067513-7067532 Msa1046560:intron 30.0%
GTCTTACTAATAAGCTCAAA+AGG + chr7_2:7067949-7067968 Msa1046560:intron 30.0%
! GAAGATTTTTGTATATGCGA+TGG + chr7_2:7067984-7068003 Msa1046560:intron 30.0%
GTCAAAACAAATTGAAGGAA+AGG - chr7_2:7068142-7068161 None:intergenic 30.0%
TTTGGGTCAAAACAAATTGA+AGG - chr7_2:7068147-7068166 None:intergenic 30.0%
!!! TTCAATTTGTTTTGACCCAA+AGG + chr7_2:7068146-7068165 Msa1046560:intron 30.0%
!! TGTAACTTGTACCTTTTATG+CGG + chr7_2:7068310-7068329 Msa1046560:intron 30.0%
AAATCCTTTAACCGCATAAA+AGG - chr7_2:7068324-7068343 None:intergenic 30.0%
! CTATCTTTTCATATTTCAGG+TGG + chr7_2:7068365-7068384 Msa1046560:intron 30.0%
TATGTACAAGTTTCGTGAAA+AGG + chr7_2:7068531-7068550 Msa1046560:intron 30.0%
GTACATTATAAAGGAAGACA+AGG + chr7_2:7068626-7068645 Msa1046560:CDS 30.0%
GAAGCAGATACAATCATAAA+AGG - chr7_2:7068827-7068846 None:intergenic 30.0%
GTTAAGATTATATTGGAGTG+AGG + chr7_2:7068910-7068929 Msa1046560:intron 30.0%
ACATAATTAATGCACAAAGC+GGG - chr7_2:7069288-7069307 None:intergenic 30.0%
TATATCTAAGCCTTCTATTC+TGG + chr7_2:7069326-7069345 Msa1046560:intron 30.0%
ATATTGCCTTTGTTCATTGT+AGG + chr7_2:7069661-7069680 Msa1046560:intron 30.0%
! AAACCAGAGAACTTTTTACT+AGG + chr7_2:7069702-7069721 Msa1046560:CDS 30.0%
AAAGAAACCTGAACATATCA+GGG - chr7_2:7069922-7069941 None:intergenic 30.0%
AAAAGAAACCTGAACATATC+AGG - chr7_2:7069923-7069942 None:intergenic 30.0%
TGTTTGAAGAAAGGATAAGA+AGG - chr7_2:7069950-7069969 None:intergenic 30.0%
!! TCATTTTTCTTCATAAAGGC+CGG + chr7_2:7070153-7070172 Msa1046560:CDS 30.0%
! TCTTGTTTGCAAAAAGAAGA+TGG + chr7_2:7070308-7070327 Msa1046560:CDS 30.0%
CTTGTTTGCAAAAAGAAGAT+GGG + chr7_2:7070309-7070328 Msa1046560:CDS 30.0%
AACTCAAGGAAATGTCTAAA+AGG - chr7_2:7070372-7070391 None:intergenic 30.0%
! GATATTAGCTTGGAATAGTT+AGG - chr7_2:7070423-7070442 None:intergenic 30.0%
ATCAAACAAGGATATTAGCT+TGG - chr7_2:7070433-7070452 None:intergenic 30.0%
TTCCCAAATTGAAATTTACC+AGG + chr7_2:7070604-7070623 Msa1046560:intron 30.0%
GACCTGGTAAATTTCAATTT+GGG - chr7_2:7070609-7070628 None:intergenic 30.0%
CAAATTGAAATTTACCAGGT+CGG + chr7_2:7070608-7070627 Msa1046560:intron 30.0%
AAATTGAAATTTACCAGGTC+GGG + chr7_2:7070609-7070628 Msa1046560:intron 30.0%
CTCAGTTATATATCTCCAAT+TGG - chr7_2:7070802-7070821 None:intergenic 30.0%
CTTATGTAACATAGATTCGA+AGG - chr7_2:7070911-7070930 None:intergenic 30.0%
AAGCATGAGTACTTGTAAAA+AGG - chr7_2:7071059-7071078 None:intergenic 30.0%
GGACATCATTATGATAGATT+TGG - chr7_2:7071089-7071108 None:intergenic 30.0%
AGATAGTAAAACAGCATCTA+AGG - chr7_2:7071118-7071137 None:intergenic 30.0%
AACACATGTCGTATAGATAT+CGG + chr7_2:7071161-7071180 Msa1046560:intron 30.0%
!!! AGTAGATACTTTTGACTTCA+TGG - chr7_2:7071395-7071414 None:intergenic 30.0%
!!! GTTTTGGTTATACTGAAAAG+TGG + chr7_2:7071439-7071458 Msa1046560:intron 30.0%
TAGGTATCATTACAATGTAG+CGG + chr7_2:7071471-7071490 Msa1046560:intron 30.0%
TTACATTACTTCTATAGCTG+GGG + chr7_2:7071777-7071796 Msa1046560:CDS 30.0%
! ATCTGTAAATGATGATGCAT+TGG + chr7_2:7071875-7071894 Msa1046560:intron 30.0%
AATATCATTCATCGTGGAAT+TGG - chr7_2:7071903-7071922 None:intergenic 30.0%
! ATCTGTAAATGATGATGCAT+TGG + chr7_2:7071875-7071894 Msa1046560:intron 30.0%
ATACAACTCTACCATACTAA+TGG - chr7_2:7072018-7072037 None:intergenic 30.0%
ATTAGTATGGTAGAGTTGTA+TGG + chr7_2:7072017-7072036 Msa1046560:intron 30.0%
AACACCTATAGTAGAAAAGA+TGG + chr7_2:7072174-7072193 Msa1046560:intron 30.0%
! TCTACCATCTTTTCTACTAT+AGG - chr7_2:7072181-7072200 None:intergenic 30.0%
AGATGGTAGAAAATAGGATT+AGG + chr7_2:7072191-7072210 Msa1046560:intron 30.0%
AAAATAGGATTAGGTGGTTT+GGG + chr7_2:7072200-7072219 Msa1046560:intron 30.0%
GAAGACCTAGAAAAACTATA+AGG + chr7_2:7072302-7072321 Msa1046560:intron 30.0%
AGATTTAGAGGTTAATGAGT+TGG + chr7_2:7072339-7072358 Msa1046560:intron 30.0%
! TAATGAGTTGGATCCAAATA+CGG + chr7_2:7072351-7072370 Msa1046560:intron 30.0%
AACACCAGTAAACTATGATA+AGG + chr7_2:7072468-7072487 Msa1046560:intron 30.0%
ACACCAGTAAACTATGATAA+GGG + chr7_2:7072469-7072488 Msa1046560:intron 30.0%
AATATCCCTGAAATTTGAGT+GGG + chr7_2:7072511-7072530 Msa1046560:intron 30.0%
ATTTCCCATTTATTGTAGAG+GGG - chr7_2:7072580-7072599 None:intergenic 30.0%
CAGATAGATCTGCTAAAAAA+TGG - chr7_2:7072859-7072878 None:intergenic 30.0%
!!! CATTTTTTAGCAGATCTATC+TGG + chr7_2:7072857-7072876 Msa1046560:intron 30.0%
!! AACTTCATTGTGATTTGTTC+TGG + chr7_2:7072947-7072966 Msa1046560:intron 30.0%
! TCTTGTTTATCCATTTGAAG+GGG - chr7_2:7073025-7073044 None:intergenic 30.0%
! CTTCTTGTTTATCCATTTGA+AGG - chr7_2:7073027-7073046 None:intergenic 30.0%
TCAAATGGATAAACAAGAAG+TGG + chr7_2:7073027-7073046 Msa1046560:CDS 30.0%
! ACAACATTTTGAATAAAGGC+AGG - chr7_2:7073209-7073228 None:intergenic 30.0%
! ACAACATTTTGAATAAAGGC+AGG - chr7_2:7073209-7073228 None:intergenic 30.0%
AACAAACCAAGCTAGAAAAT+AGG - chr7_2:7073488-7073507 None:intergenic 30.0%
!! TAGCTTGGTTTGTTGAAATT+GGG + chr7_2:7073494-7073513 Msa1046560:intron 30.0%
!! ACTTACAAGCTGATTTTGTA+GGG - chr7_2:7073530-7073549 None:intergenic 30.0%
TATAATGCTTAACAACCCAT+TGG - chr7_2:7073777-7073796 None:intergenic 30.0%
! ATGGGTTGTTAAGCATTATA+AGG + chr7_2:7073777-7073796 Msa1046560:intron 30.0%
TTATATTAGTGTTATGGGAC+AGG - chr7_2:7073873-7073892 None:intergenic 30.0%
! ATCATCCACCTTTTATATGT+AGG + chr7_2:7074085-7074104 Msa1046560:intron 30.0%
TTCAACGACCTACATATAAA+AGG - chr7_2:7074096-7074115 None:intergenic 30.0%
GCTATTTGACAACAATGAAA+GGG - chr7_2:7074444-7074463 None:intergenic 30.0%
CTTTCATTGTTGTCAAATAG+CGG + chr7_2:7074443-7074462 Msa1046560:three_prime_UTR 30.0%
ATTGTTCCCTTTACAAATGA+GGG + chr7_2:7074520-7074539 Msa1046560:three_prime_UTR 30.0%
! GATGCGACGAATTTTGAATT+GGG - chr7_2:7066785-7066804 None:intergenic 35.0%
GAATTTGGAGAATTAGGGTT+AGG - chr7_2:7066819-7066838 None:intergenic 35.0%
! TTGGATTTTTCACAGCTTAC+CGG - chr7_2:7067027-7067046 None:intergenic 35.0%
GGCTCAAATATCTCAATAAC+CGG - chr7_2:7067095-7067114 None:intergenic 35.0%
GAAGAGGTAGAAGAAATTGA+AGG + chr7_2:7067131-7067150 Msa1046560:five_prime_UTR 35.0%
AGAGGTAGAAGAAATTGAAG+GGG + chr7_2:7067133-7067152 Msa1046560:five_prime_UTR 35.0%
!! TAATAAAGGTGTTGCTCAAG+AGG + chr7_2:7067187-7067206 Msa1046560:CDS 35.0%
ACACTAAATGCAGAGAAGTA+GGG + chr7_2:7067347-7067366 Msa1046560:intron 35.0%
TGTAGGAACAATTGATATGC+TGG - chr7_2:7067389-7067408 None:intergenic 35.0%
AACATGTAGTCAAGAGAGTT+TGG + chr7_2:7067408-7067427 Msa1046560:intron 35.0%
TCATACAAGCACTAATGCAT+CGG + chr7_2:7067742-7067761 Msa1046560:intron 35.0%
CTGAACAAGTGTTCATAAGT+GGG + chr7_2:7067797-7067816 Msa1046560:intron 35.0%
TGAACAAGTGTTCATAAGTG+GGG + chr7_2:7067798-7067817 Msa1046560:intron 35.0%
CTAAAACAACCCCAAAAAAC+CGG - chr7_2:7067842-7067861 None:intergenic 35.0%
!!! GGTTTTTTGGGGTTGTTTTA+GGG + chr7_2:7067841-7067860 Msa1046560:intron 35.0%
!!! GTTTTTTGGGGTTGTTTTAG+GGG + chr7_2:7067842-7067861 Msa1046560:intron 35.0%
!!! TTTTGGGTTCCAAAAGTGTT+GGG - chr7_2:7067912-7067931 None:intergenic 35.0%
!!! TTTTTGGGTTCCAAAAGTGT+TGG - chr7_2:7067913-7067932 None:intergenic 35.0%
! TGTACCTTTTATGCGGTTAA+AGG + chr7_2:7068317-7068336 Msa1046560:intron 35.0%
! TGCGGTTAAAGGATTTTCAT+TGG + chr7_2:7068328-7068347 Msa1046560:intron 35.0%
AACAGTAAAGGTTGCAACTA+CGG + chr7_2:7068408-7068427 Msa1046560:CDS 35.0%
!!! ATTTTGTTTTGAAGCACCCT+TGG + chr7_2:7068581-7068600 Msa1046560:intron 35.0%
ACAAGGAGAATATTACGTGA+TGG + chr7_2:7068643-7068662 Msa1046560:CDS 35.0%
TATGTTGTATAGGTGGTTTG+TGG + chr7_2:7069012-7069031 Msa1046560:intron 35.0%
ATTAAGTAGAATCCGCTACT+TGG - chr7_2:7069085-7069104 None:intergenic 35.0%
!! AAGTAGCGGATTCTACTTAA+TGG + chr7_2:7069084-7069103 Msa1046560:intron 35.0%
!! AGTAGCGGATTCTACTTAAT+GGG + chr7_2:7069085-7069104 Msa1046560:intron 35.0%
! GTTTTTCTTGTGGGTGTAAA+TGG + chr7_2:7069121-7069140 Msa1046560:intron 35.0%
CTCACTGTCAAAGAAGAAAA+TGG - chr7_2:7069376-7069395 None:intergenic 35.0%
!!! ACTCCCTTTTTTGTCTTTTC+CGG + chr7_2:7069410-7069429 Msa1046560:intron 35.0%
TGACCGGAAAAGACAAAAAA+GGG - chr7_2:7069416-7069435 None:intergenic 35.0%
TTGACCGGAAAAGACAAAAA+AGG - chr7_2:7069417-7069436 None:intergenic 35.0%
CTTGTATTCAGCCTTTAGTT+TGG + chr7_2:7069603-7069622 Msa1046560:intron 35.0%
CACATACCTACAATGAACAA+AGG - chr7_2:7069670-7069689 None:intergenic 35.0%
TTCATTGTAGGTATGTGCAT+GGG + chr7_2:7069673-7069692 Msa1046560:intron 35.0%
TGACCTAGTAAAAAGTTCTC+TGG - chr7_2:7069708-7069727 None:intergenic 35.0%
TTTCTTGTTGATCTCGGATT+AGG + chr7_2:7069756-7069775 Msa1046560:CDS 35.0%
AAGAATAAAAAGAAAGGGGC+CGG - chr7_2:7069828-7069847 None:intergenic 35.0%
TTCTCATCCAGTATTTACTG+TGG + chr7_2:7070215-7070234 Msa1046560:intron 35.0%
GGAAATGTCTAAAAGGAGTA+GGG - chr7_2:7070365-7070384 None:intergenic 35.0%
AGGAAATGTCTAAAAGGAGT+AGG - chr7_2:7070366-7070385 None:intergenic 35.0%
TCATGTTCACTACAAACTCA+AGG - chr7_2:7070386-7070405 None:intergenic 35.0%
TGAGCACCTTCAGTATTAAT+TGG - chr7_2:7070486-7070505 None:intergenic 35.0%
!! TAATACTGAAGGTGCTCAAA+AGG + chr7_2:7070488-7070507 Msa1046560:CDS 35.0%
CGACCTGGTAAATTTCAATT+TGG - chr7_2:7070610-7070629 None:intergenic 35.0%
GAGAGGTAGATTGAATATTG+AGG + chr7_2:7070637-7070656 Msa1046560:CDS 35.0%
TGATTCACAGCCTAAAAAGA+AGG + chr7_2:7070667-7070686 Msa1046560:CDS 35.0%
CCTAAAAAGAAGGTTCGTTT+GGG + chr7_2:7070677-7070696 Msa1046560:CDS 35.0%
CTAAAAAGAAGGTTCGTTTG+GGG + chr7_2:7070678-7070697 Msa1046560:CDS 35.0%
TAAAAAGAAGGTTCGTTTGG+GGG + chr7_2:7070679-7070698 Msa1046560:CDS 35.0%
ATTGATATCCATTGTGTAGC+AGG - chr7_2:7070707-7070726 None:intergenic 35.0%
ATGTTACATAAGTACGGGTA+CGG + chr7_2:7070919-7070938 Msa1046560:intron 35.0%
TAGTAAAACAGCATCTAAGG+CGG - chr7_2:7071115-7071134 None:intergenic 35.0%
TTTCTTCATATAGGCCTGTT+GGG - chr7_2:7071199-7071218 None:intergenic 35.0%
!! AGTCAAAAGTATCTACTGCT+TGG + chr7_2:7071398-7071417 Msa1046560:intron 35.0%
!! GTCAAAAGTATCTACTGCTT+GGG + chr7_2:7071399-7071418 Msa1046560:intron 35.0%
! TATCATTACAATGTAGCGGA+TGG + chr7_2:7071475-7071494 Msa1046560:CDS 35.0%
!!! GTCACCTTTTTTCTTACACA+AGG + chr7_2:7071627-7071646 Msa1046560:CDS 35.0%
ATGATGTACATCATTGCATG+TGG + chr7_2:7071661-7071680 Msa1046560:intron 35.0%
AGAAAGAAGCAGAATTGGAT+GGG - chr7_2:7071723-7071742 None:intergenic 35.0%
TAGAAAGAAGCAGAATTGGA+TGG - chr7_2:7071724-7071743 None:intergenic 35.0%
ATCCAATTCTGCTTCTTTCT+AGG + chr7_2:7071723-7071742 Msa1046560:intron 35.0%
TTCCTAGAAAGAAGCAGAAT+TGG - chr7_2:7071728-7071747 None:intergenic 35.0%
! ATTCTGCTTCTTTCTAGGAA+TGG + chr7_2:7071728-7071747 Msa1046560:intron 35.0%
ACCTAACTAAAAAAGTCCCA+CGG - chr7_2:7071960-7071979 None:intergenic 35.0%
CGAAAATCAAGTAAGCGTAA+TGG + chr7_2:7072069-7072088 Msa1046560:intron 35.0%
TGGTAGAAAATAGGATTAGG+TGG + chr7_2:7072194-7072213 Msa1046560:intron 35.0%
GAAAATAGGATTAGGTGGTT+TGG + chr7_2:7072199-7072218 Msa1046560:intron 35.0%
! GTTCTATCTGAAACCGTATT+TGG - chr7_2:7072367-7072386 None:intergenic 35.0%
CGGTTTCAGATAGAACATTA+TGG + chr7_2:7072371-7072390 Msa1046560:intron 35.0%
ATGCCCTTATCATAGTTTAC+TGG - chr7_2:7072475-7072494 None:intergenic 35.0%
GAATATCCCTGAAATTTGAG+TGG + chr7_2:7072510-7072529 Msa1046560:intron 35.0%
ATATCCCTGAAATTTGAGTG+GGG + chr7_2:7072512-7072531 Msa1046560:intron 35.0%
ACCTCTTGTTGCTAATTTCA+TGG + chr7_2:7072552-7072571 Msa1046560:intron 35.0%
ACCATGAAATTAGCAACAAG+AGG - chr7_2:7072556-7072575 None:intergenic 35.0%
!!! TATGTTGCTTTTGAACTACC+AGG + chr7_2:7072624-7072643 Msa1046560:intron 35.0%
ATAAACAAGAAGTGGAGAGA+AGG + chr7_2:7073035-7073054 Msa1046560:CDS 35.0%
TAAACAAGAAGTGGAGAGAA+GGG + chr7_2:7073036-7073055 Msa1046560:CDS 35.0%
ATTACTATTATCACATGGCC+TGG + chr7_2:7073356-7073375 Msa1046560:intron 35.0%
ACTACTGATAGAATCCAAAG+AGG - chr7_2:7073415-7073434 None:intergenic 35.0%
GGATTCTATCAGTAGTTTAG+TGG + chr7_2:7073419-7073438 Msa1046560:intron 35.0%
!! CTAGCTTGGTTTGTTGAAAT+TGG + chr7_2:7073493-7073512 Msa1046560:intron 35.0%
!! CACTTACAAGCTGATTTTGT+AGG - chr7_2:7073531-7073550 None:intergenic 35.0%
AGAGTCCTATCTTTCCAAAA+TGG + chr7_2:7073575-7073594 Msa1046560:intron 35.0%
GAGTCCTATCTTTCCAAAAT+GGG + chr7_2:7073576-7073595 Msa1046560:intron 35.0%
!! AAGTCCCATTTTGGAAAGAT+AGG - chr7_2:7073583-7073602 None:intergenic 35.0%
ATCTTTCCAAAATGGGACTT+TGG + chr7_2:7073583-7073602 Msa1046560:intron 35.0%
TCTTTCCAAAATGGGACTTT+GGG + chr7_2:7073584-7073603 Msa1046560:intron 35.0%
! AAAAACCCAAAGTCCCATTT+TGG - chr7_2:7073592-7073611 None:intergenic 35.0%
TCCTCTTATTGAACTCATTC+TGG + chr7_2:7073659-7073678 Msa1046560:intron 35.0%
ACCAGAATGAGTTCAATAAG+AGG - chr7_2:7073663-7073682 None:intergenic 35.0%
!! CAATTGTAGGAAGTACCAAT+GGG + chr7_2:7073759-7073778 Msa1046560:intron 35.0%
!!! CTGTGTTTTTTAAGATGCCT+TGG + chr7_2:7073914-7073933 Msa1046560:intron 35.0%
AACGACCTACATATAAAAGG+TGG - chr7_2:7074093-7074112 None:intergenic 35.0%
CTCTTATATTAAGCAAACCG+AGG + chr7_2:7074207-7074226 Msa1046560:CDS 35.0%
ATTTCCAAGCACACATGTTA+AGG + chr7_2:7074274-7074293 Msa1046560:CDS 35.0%
AAGCACACATGTTAAGGTTT+GGG + chr7_2:7074280-7074299 Msa1046560:intron 35.0%
CGCTATTTGACAACAATGAA+AGG - chr7_2:7074445-7074464 None:intergenic 35.0%
CATTGTTCCCTTTACAAATG+AGG + chr7_2:7074519-7074538 Msa1046560:three_prime_UTR 35.0%
TTTGCCTCCTAACTAAATGT+AGG + chr7_2:7074716-7074735 Msa1046560:three_prime_UTR 35.0%
TTGACCTACATTTAGTTAGG+AGG - chr7_2:7074723-7074742 None:intergenic 35.0%
! GGATGCGACGAATTTTGAAT+TGG - chr7_2:7066786-7066805 None:intergenic 40.0%
GAACACATGCAGTAGATTTG+TGG - chr7_2:7066975-7066994 None:intergenic 40.0%
AGAAGAAATTGAAGGGGTGA+TGG + chr7_2:7067139-7067158 Msa1046560:exon 40.0%
GAAGAAATTGAAGGGGTGAT+GGG + chr7_2:7067140-7067159 Msa1046560:exon 40.0%
GGTGGTTTGAGTGCTAATAA+AGG + chr7_2:7067173-7067192 Msa1046560:CDS 40.0%
CACACTAAATGCAGAGAAGT+AGG + chr7_2:7067346-7067365 Msa1046560:intron 40.0%
TGCAGAGAAGTAGGGATAAA+TGG + chr7_2:7067355-7067374 Msa1046560:intron 40.0%
GCAGAGAAGTAGGGATAAAT+GGG + chr7_2:7067356-7067375 Msa1046560:intron 40.0%
CTCTCTTGACTACATGTTGT+AGG - chr7_2:7067406-7067425 None:intergenic 40.0%
CCACTTATGAACACTTGTTC+AGG - chr7_2:7067799-7067818 None:intergenic 40.0%
CCTGAACAAGTGTTCATAAG+TGG + chr7_2:7067796-7067815 Msa1046560:intron 40.0%
GAACAAGTGTTCATAAGTGG+GGG + chr7_2:7067799-7067818 Msa1046560:intron 40.0%
!!! CGGTTTTTTGGGGTTGTTTT+AGG + chr7_2:7067840-7067859 Msa1046560:intron 40.0%
TTTGACCCAAAGGTTCAAGT+AGG + chr7_2:7068156-7068175 Msa1046560:intron 40.0%
AACCTCCTACTTGAACCTTT+GGG - chr7_2:7068164-7068183 None:intergenic 40.0%
TTCCTCTCCACTTTGAACAT+AGG - chr7_2:7068189-7068208 None:intergenic 40.0%
TTCAAAGTGGAGAGGAAACT+TGG + chr7_2:7068192-7068211 Msa1046560:CDS 40.0%
! AAACTTGGCAAAGGTGGATT+TGG + chr7_2:7068207-7068226 Msa1046560:CDS 40.0%
! GGATTTGGACAGGTTTTTGT+TGG + chr7_2:7068222-7068241 Msa1046560:CDS 40.0%
ATTAAGACGGTCATTACCAC+CGG - chr7_2:7068259-7068278 None:intergenic 40.0%
AAGGTACAAGTTACAACCCT+CGG - chr7_2:7068305-7068324 None:intergenic 40.0%
TATTCCATGACTTCCACCAA+GGG - chr7_2:7068600-7068619 None:intergenic 40.0%
! TGTATAGGTGGTTTGTGGTT+TGG + chr7_2:7069017-7069036 Msa1046560:intron 40.0%
AATCCGCTACTTGGATCAAA+CGG - chr7_2:7069076-7069095 None:intergenic 40.0%
GGATTCTACTTAATGGGATG+AGG + chr7_2:7069091-7069110 Msa1046560:intron 40.0%
!!! AGGCTTGGTTGTTTTTCTTG+TGG + chr7_2:7069111-7069130 Msa1046560:intron 40.0%
!!! GGCTTGGTTGTTTTTCTTGT+GGG + chr7_2:7069112-7069131 Msa1046560:intron 40.0%
AAACACAGCAGAATGTTGAC+CGG - chr7_2:7069432-7069451 None:intergenic 40.0%
GTTCATTGTAGGTATGTGCA+TGG + chr7_2:7069672-7069691 Msa1046560:intron 40.0%
TCATTGTAGGTATGTGCATG+GGG + chr7_2:7069674-7069693 Msa1046560:intron 40.0%
! AACTTTTTACTAGGTCAGCC+AGG + chr7_2:7069711-7069730 Msa1046560:CDS 40.0%
TGCAAGTGTTCATGCTCATT+TGG + chr7_2:7070082-7070101 Msa1046560:CDS 40.0%
GCAAGTGTTCATGCTCATTT+GGG + chr7_2:7070083-7070102 Msa1046560:CDS 40.0%
CCAATTGCCACAGTAAATAC+TGG - chr7_2:7070225-7070244 None:intergenic 40.0%
CCAGTATTTACTGTGGCAAT+TGG + chr7_2:7070222-7070241 Msa1046560:intron 40.0%
!! TCCTTGTTTGATAGTGTGCT+TGG + chr7_2:7070441-7070460 Msa1046560:CDS 40.0%
TCCAAGCACACTATCAAACA+AGG - chr7_2:7070445-7070464 None:intergenic 40.0%
AGGTGCTCAAAAGGTAATGA+TGG + chr7_2:7070497-7070516 Msa1046560:intron 40.0%
TGCTCAAAAGGTAATGATGG+TGG + chr7_2:7070500-7070519 Msa1046560:intron 40.0%
! CACGCTTTTAAACTTTTGGG+TGG + chr7_2:7070553-7070572 Msa1046560:intron 40.0%
GCCTAAAAAGAAGGTTCGTT+TGG + chr7_2:7070676-7070695 Msa1046560:CDS 40.0%
! CCCAAACGAACCTTCTTTTT+AGG - chr7_2:7070680-7070699 None:intergenic 40.0%
CAAGAATGCCAATGAAGCAA+AGG + chr7_2:7070735-7070754 Msa1046560:CDS 40.0%
CATCTCTACCTTTGCTTCAT+TGG - chr7_2:7070746-7070765 None:intergenic 40.0%
TTGTATACCCGTATTGTACC+GGG - chr7_2:7070947-7070966 None:intergenic 40.0%
CTTGTATACCCGTATTGTAC+CGG - chr7_2:7070948-7070967 None:intergenic 40.0%
GTTTCTTCATATAGGCCTGT+TGG - chr7_2:7071200-7071219 None:intergenic 40.0%
AGGCCTATATGAAGAAACCT+CGG + chr7_2:7071202-7071221 Msa1046560:intron 40.0%
ACACCGAGGTTTCTTCATAT+AGG - chr7_2:7071208-7071227 None:intergenic 40.0%
ATCTAACCATATGATACGCC+AGG + chr7_2:7071277-7071296 Msa1046560:intron 40.0%
TCTAACCATATGATACGCCA+GGG + chr7_2:7071278-7071297 Msa1046560:intron 40.0%
AAGCCACACAGCTAATAAGA+AGG - chr7_2:7071540-7071559 None:intergenic 40.0%
CATAATAAGTGCCCAGAGAT+TGG - chr7_2:7071569-7071588 None:intergenic 40.0%
CAATCTCTGGGCACTTATTA+TGG + chr7_2:7071567-7071586 Msa1046560:CDS 40.0%
CTTATTATGGATGCTGGAAC+TGG + chr7_2:7071580-7071599 Msa1046560:CDS 40.0%
TCTATAGCTGGGGTTACTAA+TGG + chr7_2:7071787-7071806 Msa1046560:CDS 40.0%
CTATAGCTGGGGTTACTAAT+GGG + chr7_2:7071788-7071807 Msa1046560:CDS 40.0%
! TCTCTTGTGGTGATGTCAAA+AGG + chr7_2:7071814-7071833 Msa1046560:CDS 40.0%
CTAAAAAAGTCCCACGGAAT+TGG - chr7_2:7071954-7071973 None:intergenic 40.0%
!!! TCCGTGGGACTTTTTTAGTT+AGG + chr7_2:7071956-7071975 Msa1046560:intron 40.0%
GTATGGTAGAGTTGTATGGT+AGG + chr7_2:7072021-7072040 Msa1046560:intron 40.0%
!! AGTTGTATGGTAGGAGTGTT+GGG + chr7_2:7072030-7072049 Msa1046560:intron 40.0%
! CGCTTACTTGATTTTCGTGT+TGG - chr7_2:7072066-7072085 None:intergenic 40.0%
! AAGTAAGCGTAATGGAGATG+AGG + chr7_2:7072077-7072096 Msa1046560:intron 40.0%
AGGATGTTGTGTTGGATGAT+TGG + chr7_2:7072097-7072116 Msa1046560:intron 40.0%
TTGGTAAGACTAGACGAGAT+AGG + chr7_2:7072116-7072135 Msa1046560:intron 40.0%
ACACCATTAGAGAGAGAGTT+GGG + chr7_2:7072149-7072168 Msa1046560:intron 40.0%
GTTCGTACTACAGCATCTAT+CGG - chr7_2:7072241-7072260 None:intergenic 40.0%
CTGTAGTACGAACAGTAGAT+CGG + chr7_2:7072248-7072267 Msa1046560:intron 40.0%
AGTCAGATTAGAAGAGGTAG+TGG + chr7_2:7072280-7072299 Msa1046560:intron 40.0%
TATCCCTGAAATTTGAGTGG+GGG + chr7_2:7072513-7072532 Msa1046560:intron 40.0%
TGGTTCCCCTCTACAATAAA+TGG + chr7_2:7072572-7072591 Msa1046560:intron 40.0%
GGTTCCCCTCTACAATAAAT+GGG + chr7_2:7072573-7072592 Msa1046560:intron 40.0%
TCTGTAGGATCCACAGAAAT+GGG + chr7_2:7072650-7072669 Msa1046560:intron 40.0%
AGTGAGGGTGATTAGATTGT+CGG + chr7_2:7072673-7072692 Msa1046560:intron 40.0%
!! GATTGTCGGTTCAATAAGCT+TGG + chr7_2:7072687-7072706 Msa1046560:intron 40.0%
!! CATGATTTGTTGTGCAAGTG+TGG + chr7_2:7072794-7072813 Msa1046560:intron 40.0%
TTTGTTTGTCCACATGCATG+AGG + chr7_2:7072882-7072901 Msa1046560:intron 40.0%
TTGTTTGTCCACATGCATGA+GGG + chr7_2:7072883-7072902 Msa1046560:intron 40.0%
!! TGATTTGTTCTGGTTTCCAC+AGG + chr7_2:7072957-7072976 Msa1046560:intron 40.0%
TGCAAAGTTGCAATCCTCTT+TGG + chr7_2:7073398-7073417 Msa1046560:intron 40.0%
TCTATCGAACTTTGTTGGCA+GGG - chr7_2:7073449-7073468 None:intergenic 40.0%
TTCTATCGAACTTTGTTGGC+AGG - chr7_2:7073450-7073469 None:intergenic 40.0%
!! CAAGCTGATTTTGTAGGGAT+GGG - chr7_2:7073525-7073544 None:intergenic 40.0%
!! ACAAGCTGATTTTGTAGGGA+TGG - chr7_2:7073526-7073545 None:intergenic 40.0%
GTTGTATGGATCGTAGTAGT+CGG + chr7_2:7073635-7073654 Msa1046560:intron 40.0%
TCCTTCACTTCACTAGTTCA+AGG + chr7_2:7073716-7073735 Msa1046560:intron 40.0%
ACCTTGAACTAGTGAAGTGA+AGG - chr7_2:7073720-7073739 None:intergenic 40.0%
!! GCAATTGTAGGAAGTACCAA+TGG + chr7_2:7073758-7073777 Msa1046560:intron 40.0%
ATCCATAGACGATGGGATAA+TGG + chr7_2:7074143-7074162 Msa1046560:CDS 40.0%
AACCATTATCCCATCGTCTA+TGG - chr7_2:7074148-7074167 None:intergenic 40.0%
ACGAAACTCAGGAAACTCTT+CGG + chr7_2:7074243-7074262 Msa1046560:CDS 40.0%
CAAACCTTAACATGTGTGCT+TGG - chr7_2:7074281-7074300 None:intergenic 40.0%
CAAGCACACATGTTAAGGTT+TGG + chr7_2:7074279-7074298 Msa1046560:intron 40.0%
TTCCCTTTACAAATGAGGGA+GGG + chr7_2:7074524-7074543 Msa1046560:three_prime_UTR 40.0%
TACCCTCCCTCATTTGTAAA+GGG - chr7_2:7074529-7074548 None:intergenic 40.0%
ATACCCTCCCTCATTTGTAA+AGG - chr7_2:7074530-7074549 None:intergenic 40.0%
TTAGGGTTAGGGTTTGATGC+AGG - chr7_2:7066807-7066826 None:intergenic 45.0%
AATCAACGCACACGATGATC+AGG + chr7_2:7066933-7066952 Msa1046560:five_prime_UTR 45.0%
CACATGCAGTAGATTTGTGG+CGG - chr7_2:7066972-7066991 None:intergenic 45.0%
! ATACTACCCCTTTTCCTGAG+AGG + chr7_2:7067219-7067238 Msa1046560:CDS 45.0%
! TACTACCCCTTTTCCTGAGA+GGG + chr7_2:7067220-7067239 Msa1046560:CDS 45.0%
ACATACCCTCTCAGGAAAAG+GGG - chr7_2:7067228-7067247 None:intergenic 45.0%
CACATACCCTCTCAGGAAAA+GGG - chr7_2:7067229-7067248 None:intergenic 45.0%
ACACATACCCTCTCAGGAAA+AGG - chr7_2:7067230-7067249 None:intergenic 45.0%
AAAAAACCGGTTGTGAGGTG+AGG - chr7_2:7067829-7067848 None:intergenic 45.0%
!!! TCACCTCACAACCGGTTTTT+TGG + chr7_2:7067828-7067847 Msa1046560:intron 45.0%
!!! CACCTCACAACCGGTTTTTT+GGG + chr7_2:7067829-7067848 Msa1046560:intron 45.0%
!!! ACCTCACAACCGGTTTTTTG+GGG + chr7_2:7067830-7067849 Msa1046560:intron 45.0%
TTAGGGGCGAAACTAGAACT+AGG + chr7_2:7067858-7067877 Msa1046560:intron 45.0%
GGCGAAACTAGAACTAGGAT+GGG + chr7_2:7067863-7067882 Msa1046560:intron 45.0%
!! GTTCCAAAAGTGTTGGGATG+AGG - chr7_2:7067906-7067925 None:intergenic 45.0%
GAACCTCCTACTTGAACCTT+TGG - chr7_2:7068165-7068184 None:intergenic 45.0%
AGGTTCGCCTATGTTCAAAG+TGG + chr7_2:7068179-7068198 Msa1046560:CDS 45.0%
TTTGTTGGTCGTCGAGTTAC+CGG + chr7_2:7068237-7068256 Msa1046560:CDS 45.0%
! GGTGGTAATGACCGTCTTAA+TGG + chr7_2:7068258-7068277 Msa1046560:CDS 45.0%
TTGTACACTTGCCACTCGTA+AGG - chr7_2:7068438-7068457 None:intergenic 45.0%
!!! TTGTTTTGAAGCACCCTTGG+TGG + chr7_2:7068584-7068603 Msa1046560:intron 45.0%
GTATTCCATGACTTCCACCA+AGG - chr7_2:7068601-7068620 None:intergenic 45.0%
ATGCAGGTTATGGACATGCT+TGG + chr7_2:7068751-7068770 Msa1046560:intron 45.0%
TTCCAAACATCCCACAAGCT+TGG - chr7_2:7068778-7068797 None:intergenic 45.0%
! TGGGATGTTTGGAATACCAC+AGG + chr7_2:7068784-7068803 Msa1046560:CDS 45.0%
AAAAGGCTTATACTCACGCC+TGG - chr7_2:7068810-7068829 None:intergenic 45.0%
ATCCGCTACTTGGATCAAAC+GGG - chr7_2:7069075-7069094 None:intergenic 45.0%
CTACTTAATGGGATGAGGCT+TGG + chr7_2:7069096-7069115 Msa1046560:intron 45.0%
TTAATGCACAAAGCGGGTCA+AGG - chr7_2:7069282-7069301 None:intergenic 45.0%
ATGTAGGATGTCTGCCGAAA+TGG + chr7_2:7069502-7069521 Msa1046560:intron 45.0%
AGCAATGCATGCCACCATTT+CGG - chr7_2:7069519-7069538 None:intergenic 45.0%
TGTGGAGTCATTGTCGATCT+TGG + chr7_2:7069538-7069557 Msa1046560:CDS 45.0%
TCTTGGAGAAGATGCACTCA+AGG + chr7_2:7069555-7069574 Msa1046560:CDS 45.0%
CTTGGAGAAGATGCACTCAA+GGG + chr7_2:7069556-7069575 Msa1046560:CDS 45.0%
TTGGAGAAGATGCACTCAAG+GGG + chr7_2:7069557-7069576 Msa1046560:CDS 45.0%
TTCTTCTCTTGTGCTGTACC+TGG - chr7_2:7069732-7069751 None:intergenic 45.0%
ATATTCAACATGCTGCCCAG+TGG - chr7_2:7069891-7069910 None:intergenic 45.0%
TTCATAAAGGCCGGTTACCA+TGG + chr7_2:7070162-7070181 Msa1046560:CDS 45.0%
GATAACCTTGCCATGGTAAC+CGG - chr7_2:7070175-7070194 None:intergenic 45.0%
GTTACCATGGCAAGGTTATC+AGG + chr7_2:7070175-7070194 Msa1046560:CDS 45.0%
CTGCGGCCAATTAATACTGA+AGG + chr7_2:7070477-7070496 Msa1046560:CDS 45.0%
CTCATCCCATTAAGTGGATG+CGG + chr7_2:7070823-7070842 Msa1046560:intron 45.0%
TGTAGCCGCATCCACTTAAT+GGG - chr7_2:7070831-7070850 None:intergenic 45.0%
ATGTAGCCGCATCCACTTAA+TGG - chr7_2:7070832-7070851 None:intergenic 45.0%
ATTAAGTGGATGCGGCTACA+TGG + chr7_2:7070831-7070850 Msa1046560:intron 45.0%
! AAAAGGTGAAGTGCCCATAC+CGG - chr7_2:7071042-7071061 None:intergenic 45.0%
! AAACAGCATCTAAGGCGGTT+TGG - chr7_2:7071110-7071129 None:intergenic 45.0%
TAAATCACAGCAAGACACCG+AGG - chr7_2:7071222-7071241 None:intergenic 45.0%
TGAAAAGTGGCTGCACTGTT+AGG + chr7_2:7071452-7071471 Msa1046560:intron 45.0%
TGGCTTCTTGTTCCAATCTC+TGG + chr7_2:7071554-7071573 Msa1046560:CDS 45.0%
GGCTTCTTGTTCCAATCTCT+GGG + chr7_2:7071555-7071574 Msa1046560:CDS 45.0%
TGGGCACTTATTATGGATGC+TGG + chr7_2:7071574-7071593 Msa1046560:CDS 45.0%
TACTAATGGGAGCTCTCTTG+TGG + chr7_2:7071801-7071820 Msa1046560:CDS 45.0%
ATGCATTGGATCCAATTCCG+TGG + chr7_2:7071940-7071959 Msa1046560:intron 45.0%
TGCATTGGATCCAATTCCGT+GGG + chr7_2:7071941-7071960 Msa1046560:intron 45.0%
! GAGTTGTATGGTAGGAGTGT+TGG + chr7_2:7072029-7072048 Msa1046560:intron 45.0%
TGGAGATGAGGATGTTGTGT+TGG + chr7_2:7072089-7072108 Msa1046560:intron 45.0%
GACACCATTAGAGAGAGAGT+TGG + chr7_2:7072148-7072167 Msa1046560:intron 45.0%
CACCATTAGAGAGAGAGTTG+GGG + chr7_2:7072150-7072169 Msa1046560:intron 45.0%
TACCCCAACTCTCTCTCTAA+TGG - chr7_2:7072155-7072174 None:intergenic 45.0%
AGTACGAACAGTAGATCGGA+TGG + chr7_2:7072252-7072271 Msa1046560:intron 45.0%
GAGGAGAGTCAGATTAGAAG+AGG + chr7_2:7072274-7072293 Msa1046560:intron 45.0%
ACTAAGTGAGGTTGGCAACA+TGG - chr7_2:7072408-7072427 None:intergenic 45.0%
ATGTTGCCAACCTCACTTAG+TGG + chr7_2:7072407-7072426 Msa1046560:intron 45.0%
TGTTGCCAACCTCACTTAGT+GGG + chr7_2:7072408-7072427 Msa1046560:intron 45.0%
CTTATCCCACTAAGTGAGGT+TGG - chr7_2:7072416-7072435 None:intergenic 45.0%
CAACCTCACTTAGTGGGATA+AGG + chr7_2:7072414-7072433 Msa1046560:intron 45.0%
! AAGCCTTATCCCACTAAGTG+AGG - chr7_2:7072420-7072439 None:intergenic 45.0%
TCACTTAGTGGGATAAGGCT+TGG + chr7_2:7072419-7072438 Msa1046560:intron 45.0%
TGAACTACCAGGTTGTCTGT+AGG + chr7_2:7072635-7072654 Msa1046560:intron 45.0%
GTCTGTAGGATCCACAGAAA+TGG + chr7_2:7072649-7072668 Msa1046560:intron 45.0%
ATCCACAGAAATGGGAGTGA+GGG + chr7_2:7072658-7072677 Msa1046560:intron 45.0%
TTGTGTATACTGTGTGCCTG+TGG - chr7_2:7072976-7072995 None:intergenic 45.0%
AGGGTTTCACGTGACTTCAA+TGG + chr7_2:7073055-7073074 Msa1046560:CDS 45.0%
!! GTTGGGGTGTTGTTATGTCA+CGG + chr7_2:7073093-7073112 Msa1046560:CDS 45.0%
GTTGTTATGTCACGGAATGC+TGG + chr7_2:7073101-7073120 Msa1046560:CDS 45.0%
GAATGCTGGATTCAGTGATC+AGG + chr7_2:7073115-7073134 Msa1046560:CDS 45.0%
AACTTTGTGCAGAGAAGGCA+AGG - chr7_2:7074015-7074034 None:intergenic 45.0%
TGCCTTCTCTGCACAAAGTT+CGG + chr7_2:7074015-7074034 Msa1046560:intron 45.0%
AACCGAACTTTGTGCAGAGA+AGG - chr7_2:7074020-7074039 None:intergenic 45.0%
AGGTGGATGATGAGAAAGCA+AGG - chr7_2:7074076-7074095 None:intergenic 45.0%
! GACGATGGGATAATGGTTAC+AGG + chr7_2:7074150-7074169 Msa1046560:CDS 45.0%
AGCACAAGCAAGCAAGGTAA+AGG - chr7_2:7074399-7074418 None:intergenic 45.0%
TACCTTGCTTGCTTGTGCTA+TGG + chr7_2:7074400-7074419 Msa1046560:CDS 45.0%
ACCTTGCTTGCTTGTGCTAT+GGG + chr7_2:7074401-7074420 Msa1046560:CDS 45.0%
TTGTCCATCGCGGATAATAG+CGG - chr7_2:7074499-7074518 None:intergenic 45.0%
GTTCCCTTTACAAATGAGGG+AGG + chr7_2:7074523-7074542 Msa1046560:three_prime_UTR 45.0%
!! AATTGAAAAAAATAAATAAT+TGG - chr7_2:7066848-7066867 None:intergenic 5.0%
!!! TAAATAAATTTTTTAAAACA+TGG - chr7_2:7067630-7067649 None:intergenic 5.0%
!! TAATATATTATATGATATAA+TGG + chr7_2:7073159-7073178 Msa1046560:intron 5.0%
! TTTTCACAGCTTACCGGAGC+AGG - chr7_2:7067021-7067040 None:intergenic 50.0%
! CCAAACTTGTGCCGCTATCA+CGG + chr7_2:7067043-7067062 Msa1046560:five_prime_UTR 50.0%
! TTTTCTTGCCGCCGTGATAG+CGG - chr7_2:7067057-7067076 None:intergenic 50.0%
!! GTGATGGGTGATGAAAGTGG+TGG + chr7_2:7067155-7067174 Msa1046560:exon 50.0%
!! AGGTGTTGCTCAAGAGGATG+AGG + chr7_2:7067193-7067212 Msa1046560:CDS 50.0%
!! GGTGTTGCTCAAGAGGATGA+GGG + chr7_2:7067194-7067213 Msa1046560:CDS 50.0%
CATAGGACACATACCCTCTC+AGG - chr7_2:7067236-7067255 None:intergenic 50.0%
ACCCCAAAAAACCGGTTGTG+AGG - chr7_2:7067834-7067853 None:intergenic 50.0%
GGGCGAAACTAGAACTAGGA+TGG + chr7_2:7067862-7067881 Msa1046560:intron 50.0%
! GCACCTCATCCCAACACTTT+TGG + chr7_2:7067900-7067919 Msa1046560:intron 50.0%
GACCCAAAGGTTCAAGTAGG+AGG + chr7_2:7068159-7068178 Msa1046560:intron 50.0%
CGCCTATGTTCAAAGTGGAG+AGG + chr7_2:7068184-7068203 Msa1046560:CDS 50.0%
GTGGAGAGGAAACTTGGCAA+AGG + chr7_2:7068198-7068217 Msa1046560:CDS 50.0%
GAGAGGAAACTTGGCAAAGG+TGG + chr7_2:7068201-7068220 Msa1046560:CDS 50.0%
! TGGCAAAGGTGGATTTGGAC+AGG + chr7_2:7068212-7068231 Msa1046560:CDS 50.0%
AATGACCGTCTTAATGGCCC+CGG + chr7_2:7068264-7068283 Msa1046560:CDS 50.0%
ACACTTGCCACTCGTAAGGA+GGG - chr7_2:7068434-7068453 None:intergenic 50.0%
TACACTTGCCACTCGTAAGG+AGG - chr7_2:7068435-7068454 None:intergenic 50.0%
CGAGTGGCAAGTGTACAAGT+AGG + chr7_2:7068440-7068459 Msa1046560:intron 50.0%
ACATGCTTGGTCCAAGCTTG+TGG + chr7_2:7068764-7068783 Msa1046560:CDS 50.0%
CATGCTTGGTCCAAGCTTGT+GGG + chr7_2:7068765-7068784 Msa1046560:CDS 50.0%
GTCCAAGCTTGTGGGATGTT+TGG + chr7_2:7068773-7068792 Msa1046560:CDS 50.0%
! TGTTTGGAATACCACAGGCC+AGG + chr7_2:7068789-7068808 Msa1046560:CDS 50.0%
TCCGCTACTTGGATCAAACG+GGG - chr7_2:7069074-7069093 None:intergenic 50.0%
GAGGACACAGCCAGAATAGA+AGG - chr7_2:7069339-7069358 None:intergenic 50.0%
TAGGATGTCTGCCGAAATGG+TGG + chr7_2:7069505-7069524 Msa1046560:intron 50.0%
AATGGTGGCATGCATTGCTG+TGG + chr7_2:7069520-7069539 Msa1046560:CDS 50.0%
TGGAGAAGATGCACTCAAGG+GGG + chr7_2:7069558-7069577 Msa1046560:CDS 50.0%
AGCACCTGATAACCTTGCCA+TGG - chr7_2:7070182-7070201 None:intergenic 50.0%
CAGAAGCAGCATAGCATCTC+AGG - chr7_2:7070342-7070361 None:intergenic 50.0%
TTGGACCAAATCCTGCACTG+CGG + chr7_2:7070460-7070479 Msa1046560:CDS 50.0%
GTATTAATTGGCCGCAGTGC+AGG - chr7_2:7070474-7070493 None:intergenic 50.0%
CTGAGCCTCATCCCATTAAG+TGG + chr7_2:7070817-7070836 Msa1046560:intron 50.0%
CGCATCCACTTAATGGGATG+AGG - chr7_2:7070825-7070844 None:intergenic 50.0%
ATAAGTACGGGTACGGTACC+CGG + chr7_2:7070926-7070945 Msa1046560:intron 50.0%
GTACGGTACCCGGTACAATA+CGG + chr7_2:7070936-7070955 Msa1046560:intron 50.0%
TACGGTACCCGGTACAATAC+GGG + chr7_2:7070937-7070956 Msa1046560:intron 50.0%
! AAAGGTGAAGTGCCCATACC+GGG - chr7_2:7071041-7071060 None:intergenic 50.0%
GGTGTCAAAGTATGCCCAAC+AGG + chr7_2:7071182-7071201 Msa1046560:intron 50.0%
ATGACAAGCTATGCACACCC+TGG - chr7_2:7071298-7071317 None:intergenic 50.0%
TAGCGCAACATGTAGAGCGA+GGG + chr7_2:7071503-7071522 Msa1046560:CDS 50.0%
CGGCCTTCTTATTAGCTGTG+TGG + chr7_2:7071534-7071553 Msa1046560:CDS 50.0%
!! TGTATGGTAGGAGTGTTGGG+CGG + chr7_2:7072033-7072052 Msa1046560:intron 50.0%
ACGAACAGTAGATCGGATGG+AGG + chr7_2:7072255-7072274 Msa1046560:intron 50.0%
CCACCCCCACTCAAATTTCA+GGG - chr7_2:7072519-7072538 None:intergenic 50.0%
CCTGAAATTTGAGTGGGGGT+GGG + chr7_2:7072517-7072536 Msa1046560:intron 50.0%
CTGAAATTTGAGTGGGGGTG+GGG + chr7_2:7072518-7072537 Msa1046560:intron 50.0%
TGAAATTTGAGTGGGGGTGG+GGG + chr7_2:7072519-7072538 Msa1046560:intron 50.0%
TGTGGATCCTACAGACAACC+TGG - chr7_2:7072645-7072664 None:intergenic 50.0%
GATCCACAGAAATGGGAGTG+AGG + chr7_2:7072657-7072676 Msa1046560:intron 50.0%
GTTGTGCAAGTGTGGCAAAG+AGG + chr7_2:7072802-7072821 Msa1046560:intron 50.0%
AAGGGAAACCCTCATGCATG+TGG - chr7_2:7072894-7072913 None:intergenic 50.0%
GCGAGTCTTTCCCCTTCAAA+TGG + chr7_2:7073012-7073031 Msa1046560:CDS 50.0%
TGATTTCCTCTACCCTAGCG+AGG + chr7_2:7074118-7074137 Msa1046560:CDS 50.0%
GATTTCCTCTACCCTAGCGA+GGG + chr7_2:7074119-7074138 Msa1046560:CDS 50.0%
GTCTATGGATTCCCTCGCTA+GGG - chr7_2:7074133-7074152 None:intergenic 50.0%
CGAGGGAATCCATAGACGAT+GGG + chr7_2:7074136-7074155 Msa1046560:CDS 50.0%
TCACAGCAACTGCAGCTACA+TGG + chr7_2:7074174-7074193 Msa1046560:CDS 50.0%
CACAGCAACTGCAGCTACAT+GGG + chr7_2:7074175-7074194 Msa1046560:CDS 50.0%
AAGACCTGCTGACGAAACTC+AGG + chr7_2:7074232-7074251 Msa1046560:CDS 50.0%
GTTTCCTGAGTTTCGTCAGC+AGG - chr7_2:7074239-7074258 None:intergenic 50.0%
CAAACCGCTATTATCCGCGA+TGG + chr7_2:7074492-7074511 Msa1046560:three_prime_UTR 50.0%
GGGAACAATGTTGTCCATCG+CGG - chr7_2:7074509-7074528 None:intergenic 50.0%
AGTACTTCGTCGTCCTGCTC+CGG + chr7_2:7067005-7067024 Msa1046560:five_prime_UTR 55.0%
!! CCGTGATAGCGGCACAAGTT+TGG - chr7_2:7067046-7067065 None:intergenic 55.0%
! AACTTGTGCCGCTATCACGG+CGG + chr7_2:7067046-7067065 Msa1046560:five_prime_UTR 55.0%
!! GGGGTGATGGGTGATGAAAG+TGG + chr7_2:7067152-7067171 Msa1046560:exon 55.0%
GGCAATCCTCACCTCACAAC+CGG + chr7_2:7067820-7067839 Msa1046560:intron 55.0%
AACTAGGATGGGCGACCTCT+TGG + chr7_2:7067874-7067893 Msa1046560:intron 55.0%
ACTAGGATGGGCGACCTCTT+GGG + chr7_2:7067875-7067894 Msa1046560:intron 55.0%
AGCACCCTTGGTGGAAGTCA+TGG + chr7_2:7068593-7068612 Msa1046560:intron 55.0%
TTATACTCACGCCTGGCCTG+TGG - chr7_2:7068803-7068822 None:intergenic 55.0%
GCCCCGTTTGATCCAAGTAG+CGG + chr7_2:7069070-7069089 Msa1046560:intron 55.0%
AAGTGGAGAGACACCTCCAC+TGG + chr7_2:7069872-7069891 Msa1046560:CDS 55.0%
AGTGGAGAGACACCTCCACT+GGG + chr7_2:7069873-7069892 Msa1046560:CDS 55.0%
TTCAACATGCTGCCCAGTGG+AGG - chr7_2:7069888-7069907 None:intergenic 55.0%
ACCAGCGCCCTGATATGTTC+AGG + chr7_2:7069912-7069931 Msa1046560:CDS 55.0%
ACCTGAACATATCAGGGCGC+TGG - chr7_2:7069916-7069935 None:intergenic 55.0%
AAAGGCCGGTTACCATGGCA+AGG + chr7_2:7070167-7070186 Msa1046560:CDS 55.0%
ATTGGCCGCAGTGCAGGATT+TGG - chr7_2:7070468-7070487 None:intergenic 55.0%
TACCAGGTCGGGCAAAAGAG+AGG + chr7_2:7070620-7070639 Msa1046560:intron 55.0%
! TACCTCTCTTTTGCCCGACC+TGG - chr7_2:7070625-7070644 None:intergenic 55.0%
TGGGGGTTCCTGCTACACAA+TGG + chr7_2:7070696-7070715 Msa1046560:CDS 55.0%
! TGTACCGCGAGTACTGTACG+TGG + chr7_2:7071014-7071033 Msa1046560:intron 55.0%
TACTGTACGTGGACCCGGTA+TGG + chr7_2:7071025-7071044 Msa1046560:intron 55.0%
ACTGTACGTGGACCCGGTAT+GGG + chr7_2:7071026-7071045 Msa1046560:intron 55.0%
GCACACCCTGGCGTATCATA+TGG - chr7_2:7071286-7071305 None:intergenic 55.0%
CTAGCGCAACATGTAGAGCG+AGG + chr7_2:7071502-7071521 Msa1046560:CDS 55.0%
GTAGAGCGAGGGATTGCAGA+CGG + chr7_2:7071514-7071533 Msa1046560:CDS 55.0%
CCCTGAAATTTGAGTGGGGG+TGG + chr7_2:7072516-7072535 Msa1046560:intron 55.0%
CCCACCCCCACTCAAATTTC+AGG - chr7_2:7072520-7072539 None:intergenic 55.0%
GAAATTTGAGTGGGGGTGGG+GGG + chr7_2:7072520-7072539 Msa1046560:intron 55.0%
CACCCTCACTCCCATTTCTG+TGG - chr7_2:7072663-7072682 None:intergenic 55.0%
GTGACTTCAATGGCCACTGC+TGG + chr7_2:7073065-7073084 Msa1046560:CDS 55.0%
!! CATGGCCTGGCTTTGCAAAC+TGG + chr7_2:7073369-7073388 Msa1046560:intron 55.0%
GCACACCAGTTTGCAAAGCC+AGG - chr7_2:7073377-7073396 None:intergenic 55.0%
CGTCTATGGATTCCCTCGCT+AGG - chr7_2:7074134-7074153 None:intergenic 55.0%
GCGAGGGAATCCATAGACGA+TGG + chr7_2:7074135-7074154 Msa1046560:CDS 55.0%
GCCCATAGCACAAGCAAGCA+AGG - chr7_2:7074405-7074424 None:intergenic 55.0%
!! AGCGGCTTGTTGTAGCGTAG+CGG + chr7_2:7074461-7074480 Msa1046560:three_prime_UTR 55.0%
ACATCCACCACCCAAAGAGG+GGG - chr7_2:7074668-7074687 None:intergenic 55.0%
CACATCCACCACCCAAAGAG+GGG - chr7_2:7074669-7074688 None:intergenic 55.0%
CCACATCCACCACCCAAAGA+GGG - chr7_2:7074670-7074689 None:intergenic 55.0%
GGAGCAGGACGACGAAGTAC+TGG - chr7_2:7067006-7067025 None:intergenic 60.0%
GGGATGAGGTGCAACCCAAG+AGG - chr7_2:7067892-7067911 None:intergenic 60.0%
GTTGGTCGTCGAGTTACCGG+TGG + chr7_2:7068240-7068259 Msa1046560:CDS 60.0%
! TGGCACCGGGGCCATTAAGA+CGG - chr7_2:7068272-7068291 None:intergenic 60.0%
TCGGCATACCTCAGTGGCAC+CGG - chr7_2:7068286-7068305 None:intergenic 60.0%
! GTGCCACTGAGGTATGCCGA+GGG + chr7_2:7068286-7068305 Msa1046560:intron 60.0%
CAACCCTCGGCATACCTCAG+TGG - chr7_2:7068292-7068311 None:intergenic 60.0%
ACTACGGCCCTCCTTACGAG+TGG + chr7_2:7068424-7068443 Msa1046560:CDS 60.0%
GGGTCCACGTACAGTACTCG+CGG - chr7_2:7071021-7071040 None:intergenic 60.0%
! GCGAGTACTGTACGTGGACC+CGG + chr7_2:7071020-7071039 Msa1046560:intron 60.0%
TGGCCACTGCTGGAAGTCGT+TGG + chr7_2:7073075-7073094 Msa1046560:CDS 60.0%
GGCCACTGCTGGAAGTCGTT+GGG + chr7_2:7073076-7073095 Msa1046560:CDS 60.0%
GCCACTGCTGGAAGTCGTTG+GGG + chr7_2:7073077-7073096 Msa1046560:CDS 60.0%
ACCCCAACGACTTCCAGCAG+TGG - chr7_2:7073081-7073100 None:intergenic 60.0%
GGATTCCCTCGCTAGGGTAG+AGG - chr7_2:7074127-7074146 None:intergenic 60.0%
TCGTCAGCAGGTCTTCGCCT+CGG - chr7_2:7074227-7074246 None:intergenic 60.0%
!! CCCTCTTTGGGTGGTGGATG+TGG + chr7_2:7074667-7074686 Msa1046560:three_prime_UTR 60.0%
GCCACATCCACCACCCAAAG+AGG - chr7_2:7074671-7074690 None:intergenic 60.0%
!! TAATGGCCCCGGTGCCACTG+AGG + chr7_2:7068275-7068294 Msa1046560:CDS 65.0%
GGCATACCTCAGTGGCACCG+GGG - chr7_2:7068284-7068303 None:intergenic 65.0%
CGGCATACCTCAGTGGCACC+GGG - chr7_2:7068285-7068304 None:intergenic 65.0%
!! GGTGCCACTGAGGTATGCCG+AGG + chr7_2:7068285-7068304 Msa1046560:intron 65.0%
TGCTCTCCGCACCCCCTCTT+TGG + chr7_2:7074654-7074673 Msa1046560:three_prime_UTR 65.0%
GCTCTCCGCACCCCCTCTTT+GGG + chr7_2:7074655-7074674 Msa1046560:three_prime_UTR 65.0%
CACCACCCAAAGAGGGGGTG+CGG - chr7_2:7074663-7074682 None:intergenic 65.0%
CTCCGCACCCCCTCTTTGGG+TGG + chr7_2:7074658-7074677 Msa1046560:three_prime_UTR 70.0%
CGCACCCCCTCTTTGGGTGG+TGG + chr7_2:7074661-7074680 Msa1046560:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 7066753 7074815 7066753 ID=Msa1046560;Name=Msa1046560
chr7_2 mRNA 7066753 7074815 7066753 ID=Msa1046560-mRNA-1;Parent=Msa1046560;Name=Msa1046560-mRNA-1;_AED=0.10;_eAED=0.10;_QI=405|1|1|1|0.93|0.93|16|377|599
chr7_2 exon 7066753 7067241 7066753 ID=Msa1046560-mRNA-1:exon:1700;Parent=Msa1046560-mRNA-1
chr7_2 exon 7068168 7068296 7068168 ID=Msa1046560-mRNA-1:exon:1701;Parent=Msa1046560-mRNA-1
chr7_2 exon 7068384 7068457 7068384 ID=Msa1046560-mRNA-1:exon:1702;Parent=Msa1046560-mRNA-1
chr7_2 exon 7068595 7068664 7068595 ID=Msa1046560-mRNA-1:exon:1703;Parent=Msa1046560-mRNA-1
chr7_2 exon 7068757 7068812 7068757 ID=Msa1046560-mRNA-1:exon:1704;Parent=Msa1046560-mRNA-1
chr7_2 exon 7069508 7069579 7069508 ID=Msa1046560-mRNA-1:exon:1705;Parent=Msa1046560-mRNA-1
chr7_2 exon 7069683 7069777 7069683 ID=Msa1046560-mRNA-1:exon:1706;Parent=Msa1046560-mRNA-1
chr7_2 exon 7069867 7069933 7069867 ID=Msa1046560-mRNA-1:exon:1707;Parent=Msa1046560-mRNA-1
chr7_2 exon 7070067 7070196 7070067 ID=Msa1046560-mRNA-1:exon:1708;Parent=Msa1046560-mRNA-1
chr7_2 exon 7070291 7070509 7070291 ID=Msa1046560-mRNA-1:exon:1709;Parent=Msa1046560-mRNA-1
chr7_2 exon 7070626 7070756 7070626 ID=Msa1046560-mRNA-1:exon:1710;Parent=Msa1046560-mRNA-1
chr7_2 exon 7071474 7071648 7071474 ID=Msa1046560-mRNA-1:exon:1711;Parent=Msa1046560-mRNA-1
chr7_2 exon 7071745 7071835 7071745 ID=Msa1046560-mRNA-1:exon:1712;Parent=Msa1046560-mRNA-1
chr7_2 exon 7072979 7073136 7072979 ID=Msa1046560-mRNA-1:exon:1713;Parent=Msa1046560-mRNA-1
chr7_2 exon 7074107 7074295 7074107 ID=Msa1046560-mRNA-1:exon:1714;Parent=Msa1046560-mRNA-1
chr7_2 exon 7074379 7074815 7074379 ID=Msa1046560-mRNA-1:exon:1715;Parent=Msa1046560-mRNA-1
chr7_2 five_prime_UTR 7066753 7067157 7066753 ID=Msa1046560-mRNA-1:five_prime_utr;Parent=Msa1046560-mRNA-1
chr7_2 CDS 7067158 7067241 7067158 ID=Msa1046560-mRNA-1:cds;Parent=Msa1046560-mRNA-1
chr7_2 CDS 7068168 7068296 7068168 ID=Msa1046560-mRNA-1:cds;Parent=Msa1046560-mRNA-1
chr7_2 CDS 7068384 7068457 7068384 ID=Msa1046560-mRNA-1:cds;Parent=Msa1046560-mRNA-1
chr7_2 CDS 7068595 7068664 7068595 ID=Msa1046560-mRNA-1:cds;Parent=Msa1046560-mRNA-1
chr7_2 CDS 7068757 7068812 7068757 ID=Msa1046560-mRNA-1:cds;Parent=Msa1046560-mRNA-1
chr7_2 CDS 7069508 7069579 7069508 ID=Msa1046560-mRNA-1:cds;Parent=Msa1046560-mRNA-1
chr7_2 CDS 7069683 7069777 7069683 ID=Msa1046560-mRNA-1:cds;Parent=Msa1046560-mRNA-1
chr7_2 CDS 7069867 7069933 7069867 ID=Msa1046560-mRNA-1:cds;Parent=Msa1046560-mRNA-1
chr7_2 CDS 7070067 7070196 7070067 ID=Msa1046560-mRNA-1:cds;Parent=Msa1046560-mRNA-1
chr7_2 CDS 7070291 7070509 7070291 ID=Msa1046560-mRNA-1:cds;Parent=Msa1046560-mRNA-1
chr7_2 CDS 7070626 7070756 7070626 ID=Msa1046560-mRNA-1:cds;Parent=Msa1046560-mRNA-1
chr7_2 CDS 7071474 7071648 7071474 ID=Msa1046560-mRNA-1:cds;Parent=Msa1046560-mRNA-1
chr7_2 CDS 7071745 7071835 7071745 ID=Msa1046560-mRNA-1:cds;Parent=Msa1046560-mRNA-1
chr7_2 CDS 7072979 7073136 7072979 ID=Msa1046560-mRNA-1:cds;Parent=Msa1046560-mRNA-1
chr7_2 CDS 7074107 7074295 7074107 ID=Msa1046560-mRNA-1:cds;Parent=Msa1046560-mRNA-1
chr7_2 CDS 7074379 7074438 7074379 ID=Msa1046560-mRNA-1:cds;Parent=Msa1046560-mRNA-1
chr7_2 three_prime_UTR 7074439 7074815 7074439 ID=Msa1046560-mRNA-1:three_prime_utr;Parent=Msa1046560-mRNA-1
Gene Sequence

>Msa1046560

ATGGGTGATGAAAGTGGTGGTTTGAGTGCTAATAAAGGTGTTGCTCAAGAGGATGAGGGCAATACTACCCCTTTTCCTGAGAGGGTTCAAGTAGGAGGTTCGCCTATGTTCAAAGTGGAGAGGAAACTTGGCAAAGGTGGATTTGGACAGGTTTTTGTTGGTCGTCGAGTTACCGGTGGTAATGACCGTCTTAATGGCCCCGGTGCCACTGAGGTGGCTTTGAAATTTGAACATAGAAACAGTAAAGGTTGCAACTACGGCCCTCCTTACGAGTGGCAAGTGTACAACACCCTTGGTGGAAGTCATGGAATACCCAAAGTACATTATAAAGGAAGACAAGGAGAATATTACGTGATGGTTATGGACATGCTTGGTCCAAGCTTGTGGGATGTTTGGAATACCACAGGCCAGGCGATGTCTGCCGAAATGGTGGCATGCATTGCTGTGGAGTCATTGTCGATCTTGGAGAAGATGCACTCAAGGGGGTATGTGCATGGGGATGTAAAACCAGAGAACTTTTTACTAGGTCAGCCAGGTACAGCACAAGAGAAGAAATTGTTTCTTGTTGATCTCGGATTAGCAACAAAGTGGAGAGACACCTCCACTGGGCAGCATGTTGAATATGACCAGCGCCCTGATATGTTCAGAGGAACTGTTCGATATGCAAGTGTTCATGCTCATTTGGGAAGAACTGCTAGTAGAAGAGATGATCTTGAATCTCTTGCATATACACTCATTTTTCTTCATAAAGGCCGGTTACCATGGCAAGGTTATCAGGGAGATAATAAGTCGTATCTTGTTTGCAAAAAGAAGATGGGAACATCTCCTGAGATGCTATGCTGCTTCTGCCCTACTCCTTTTAGACATTTCCTTGAGTTTGTAGTGAACATGAAATTCGATGAAGAGCCTAACTATTCCAAGCTAATATCCTTGTTTGATAGTGTGCTTGGACCAAATCCTGCACTGCGGCCAATTAATACTGAAGGTGCTCAAAAGGTCGGGCAAAAGAGAGGTAGATTGAATATTGAGGAAGAAGATGATTCACAGCCTAAAAAGAAGGTTCGTTTGGGGGTTCCTGCTACACAATGGATATCAATTTACAATGCAAGAATGCCAATGAAGCAAAGGTATCATTACAATGTAGCGGATGGACGACTAGCGCAACATGTAGAGCGAGGGATTGCAGACGGCCTTCTTATTAGCTGTGTGGCTTCTTGTTCCAATCTCTGGGCACTTATTATGGATGCTGGAACTGGATTTACAAATCAAGTCTACAAGTTGTCACCTTTTTTCTTACACAAGGAATGGATCATGGAGCAATGGGAGAAGAACTATTACATTACTTCTATAGCTGGGGTTACTAATGGGAGCTCTCTTGTGGTGATGTCAAAAGGCACACAGTATACACAACAGTCATACAAAGTAAGCGAGTCTTTCCCCTTCAAATGGATAAACAAGAAGTGGAGAGAAGGGTTTCACGTGACTTCAATGGCCACTGCTGGAAGTCGTTGGGGTGTTGTTATGTCACGGAATGCTGGATTCAGTGATCAGGTCGTTGAACTTGATTTCCTCTACCCTAGCGAGGGAATCCATAGACGATGGGATAATGGTTACAGGATCACAGCAACTGCAGCTACATGGGATCAATCTGCTCTTATATTAAGCAAACCGAGGCGAAGACCTGCTGACGAAACTCAGGAAACTCTTCGGACGTCTCAATTTCCAAGCACACATGTTAAGGAAAAATGGTCAAAAAACCTTTACCTTGCTTGCTTGTGCTATGGGCGTACAGTATGTTGA
Protein sequence

>Msa1046560

MGDESGGLSANKGVAQEDEGNTTPFPERVQVGGSPMFKVERKLGKGGFGQVFVGRRVTGGNDRLNGPGATEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDMLGPSLWDVWNTTGQAMSAEMVACIAVESLSILEKMHSRGYVHGDVKPENFLLGQPGTAQEKKLFLVDLGLATKWRDTSTGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKSYLVCKKKMGTSPEMLCCFCPTPFRHFLEFVVNMKFDEEPNYSKLISLFDSVLGPNPALRPINTEGAQKVGQKRGRLNIEEEDDSQPKKKVRLGVPATQWISIYNARMPMKQRYHYNVADGRLAQHVERGIADGLLISCVASCSNLWALIMDAGTGFTNQVYKLSPFFLHKEWIMEQWEKNYYITSIAGVTNGSSLVVMSKGTQYTQQSYKVSESFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSDQVVELDFLYPSEGIHRRWDNGYRITATAATWDQSALILSKPRRRPADETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTVC*