AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1048640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1048640 MtrunA17_Chr7g0217061 86.093 151 21 0 121 271 641 791 4.10e-81 259
Msa1048640 MtrunA17_Chr7g0217061 50.276 181 39 5 2 131 356 536 1.35e-46 166
Msa1048640 MtrunA17_Chr7g0217081 85.333 150 22 0 121 270 718 867 6.89e-80 258
Msa1048640 MtrunA17_Chr7g0217081 53.374 163 44 4 1 131 451 613 1.93e-42 154
Msa1048640 MtrunA17_Chr7g0215651 81.333 150 28 0 121 270 591 740 6.06e-77 247
Msa1048640 MtrunA17_Chr7g0215651 51.190 168 45 4 2 132 320 487 3.42e-44 159
Msa1048640 MtrunA17_Chr7g0215681 80.667 150 29 0 121 270 638 787 1.99e-74 241
Msa1048640 MtrunA17_Chr7g0215681 47.953 171 49 5 2 132 364 534 1.56e-40 149
Msa1048640 MtrunA17_Chr7g0215641 77.333 150 34 0 121 270 625 774 8.10e-73 237
Msa1048640 MtrunA17_Chr7g0215641 51.124 178 39 6 2 131 343 520 1.32e-43 157
Msa1048640 MtrunA17_Chr7g0215061 79.333 150 31 0 121 270 679 828 1.25e-72 238
Msa1048640 MtrunA17_Chr7g0215061 48.521 169 38 2 2 121 393 561 1.72e-41 151
Msa1048640 MtrunA17_Chr7g0215631 76.667 150 35 0 121 270 600 749 1.37e-71 233
Msa1048640 MtrunA17_Chr7g0215631 50.888 169 44 3 2 131 327 495 1.18e-44 160
Msa1048640 MtrunA17_Chr7g0218871 49.814 269 91 4 1 269 1 225 9.20e-70 214
Msa1048640 MtrunA17_Chr7g0218991 76.667 150 35 0 121 270 614 763 9.48e-70 229
Msa1048640 MtrunA17_Chr7g0218991 52.564 156 38 2 2 121 341 496 5.51e-43 155
Msa1048640 MtrunA17_Chr7g0215671 78.000 150 33 0 121 270 607 756 8.52e-69 226
Msa1048640 MtrunA17_Chr7g0215671 50.898 167 43 3 2 129 334 500 1.30e-43 157
Msa1048640 MtrunA17_Chr7g0215011 78.378 148 32 0 121 268 638 785 9.38e-68 224
Msa1048640 MtrunA17_Chr7g0215011 52.601 173 37 4 2 129 359 531 1.99e-49 174
Msa1048640 MtrunA17_Chr8g0357191 78.667 150 32 0 121 270 847 996 1.54e-67 226
Msa1048640 MtrunA17_Chr8g0357191 53.293 167 41 3 2 131 576 742 1.11e-46 167
Msa1048640 MtrunA17_Chr8g0357151 78.667 150 32 0 121 270 931 1080 2.78e-66 223
Msa1048640 MtrunA17_Chr8g0357151 51.497 167 44 4 2 131 660 826 1.07e-44 161
Msa1048640 MtrunA17_Chr8g0357171 78.000 150 33 0 121 270 803 952 3.80e-66 221
Msa1048640 MtrunA17_Chr8g0357171 45.902 183 47 4 2 132 517 699 2.54e-41 151
Msa1048640 MtrunA17_Chr7g0217101 53.049 164 45 4 1 132 206 369 1.54e-42 152
Msa1048640 MtrunA17_Chr7g0217101 89.655 58 6 0 121 178 473 530 1.50e-28 114
Msa1048640 MtrunA17_Chr5g0439291 50.000 142 66 2 121 258 892 1032 1.47e-35 134
Msa1048640 MtrunA17_Chr5g0439291 32.934 167 65 2 4 123 610 776 1.93e-20 90.9
Msa1048640 MtrunA17_Chr7g0217041 46.043 139 75 0 121 259 675 813 5.32e-33 127
Msa1048640 MtrunA17_Chr7g0217041 40.000 160 54 3 2 120 398 556 4.27e-29 115
Msa1048640 MtrunA17_Chr7g0250491 47.552 143 68 3 121 257 936 1077 6.82e-32 124
Msa1048640 MtrunA17_Chr7g0250491 39.535 86 50 1 38 123 737 820 4.95e-16 77.8
Msa1048640 MtrunA17_Chr8g0355401 50.000 116 52 2 121 231 35 149 8.12e-32 115
Msa1048640 MtrunA17_Chr1g0165191 52.500 120 50 3 121 234 1027 1145 9.35e-32 124
Msa1048640 MtrunA17_Chr1g0165191 50.000 72 34 1 50 121 840 909 2.64e-18 84.7
Msa1048640 MtrunA17_Chr1g0165181 48.333 120 55 3 121 234 163 281 1.03e-30 116
Msa1048640 MtrunA17_Chr1g0165181 57.778 45 19 0 77 121 1 45 5.32e-12 64.7
Msa1048640 MtrunA17_Chr7g0250431 48.855 131 58 3 121 245 64 191 3.05e-30 112
Msa1048640 MtrunA17_Chr7g0216261 43.624 149 46 2 1 133 252 378 3.33e-30 117
Msa1048640 MtrunA17_Chr7g0250471 45.833 144 69 3 121 258 919 1059 1.22e-29 117
Msa1048640 MtrunA17_Chr7g0250471 40.698 86 45 2 38 120 720 802 2.85e-13 69.7
Msa1048640 MtrunA17_Chr1g0165261 51.181 127 53 3 121 239 469 594 2.50e-29 116
Msa1048640 MtrunA17_Chr1g0165261 43.750 80 43 1 49 128 279 356 1.26e-17 82.4
Msa1048640 MtrunA17_Chr1g0165221 49.606 127 55 2 121 239 1004 1129 3.50e-29 116
Msa1048640 MtrunA17_Chr1g0165221 33.333 162 62 3 6 121 725 886 1.20e-19 88.6
Msa1048640 MtrunA17_Chr1g0165231 51.181 127 53 3 121 239 1030 1155 5.06e-29 115
Msa1048640 MtrunA17_Chr1g0165231 53.226 62 27 1 66 127 857 916 8.77e-18 83.2
Msa1048640 MtrunA17_Chr1g0165301 51.181 127 53 3 121 239 1030 1155 5.06e-29 115
Msa1048640 MtrunA17_Chr1g0165301 53.226 62 27 1 66 127 857 916 8.77e-18 83.2
Msa1048640 MtrunA17_Chr1g0165891 49.606 127 55 3 121 239 547 672 5.87e-29 115
Msa1048640 MtrunA17_Chr1g0165891 57.143 56 24 0 66 121 374 429 6.94e-18 83.2
Msa1048640 MtrunA17_Chr1g0165951 49.606 127 55 3 121 239 877 1002 5.93e-29 115
Msa1048640 MtrunA17_Chr1g0165951 57.143 56 24 0 66 121 704 759 4.62e-18 84.0
Msa1048640 MtrunA17_Chr1g0165211 49.606 127 55 3 121 239 1047 1172 8.41e-29 115
Msa1048640 MtrunA17_Chr1g0165211 51.163 86 39 2 53 138 863 945 5.69e-20 89.7
Msa1048640 MtrunA17_Chr1g0165901 51.181 127 53 3 121 239 1115 1240 1.36e-28 114
Msa1048640 MtrunA17_Chr1g0165901 57.143 56 24 0 66 121 942 997 7.44e-18 83.2
Msa1048640 MtrunA17_Chr7g0250401 48.855 131 58 3 121 245 459 586 3.18e-28 113
Msa1048640 MtrunA17_Chr7g0250401 45.205 73 40 0 48 120 266 338 2.86e-16 78.6
Msa1048640 MtrunA17_Chr1g0165971 49.606 127 55 3 121 239 932 1057 5.02e-28 113
Msa1048640 MtrunA17_Chr1g0165971 57.143 56 24 0 66 121 759 814 5.92e-18 83.6
Msa1048640 MtrunA17_Chr7g0232451 52.800 125 53 4 121 240 878 1001 6.29e-28 112
Msa1048640 MtrunA17_Chr7g0232451 37.500 128 67 4 6 121 634 760 8.43e-18 83.2
Msa1048640 MtrunA17_Chr7g0233841 47.619 126 57 2 121 238 188 312 6.30e-28 109
Msa1048640 MtrunA17_Chr7g0233841 43.590 78 42 1 58 135 9 84 1.37e-16 78.2
Msa1048640 MtrunA17_Chr4g0019371 48.305 118 60 1 121 238 820 936 9.59e-28 112
Msa1048640 MtrunA17_Chr4g0019371 57.407 54 23 0 66 119 646 699 3.47e-15 75.5
Msa1048640 MtrunA17_Chr7g0231541 50.000 120 57 3 121 238 595 713 9.91e-28 112
Msa1048640 MtrunA17_Chr7g0231541 42.353 85 44 1 42 121 393 477 2.03e-17 82.0
Msa1048640 MtrunA17_Chr4g0019041 48.276 116 59 1 121 236 825 939 1.07e-27 112
Msa1048640 MtrunA17_Chr4g0019041 57.692 52 22 0 68 119 653 704 8.67e-15 74.3
Msa1048640 MtrunA17_Chr1g0165141 48.333 120 55 3 121 234 1004 1122 1.19e-27 112
Msa1048640 MtrunA17_Chr1g0165141 51.389 72 33 1 50 121 817 886 1.32e-18 85.5
Msa1048640 MtrunA17_Chr7g0232131 50.000 120 57 3 121 238 1062 1180 1.25e-27 112
Msa1048640 MtrunA17_Chr7g0232131 31.395 172 67 6 1 121 773 944 7.87e-18 83.2
Msa1048640 MtrunA17_Chr7g0232171 48.333 120 56 3 121 238 967 1082 2.53e-27 110
Msa1048640 MtrunA17_Chr7g0232171 31.214 173 67 6 1 121 677 849 3.39e-19 87.4
Msa1048640 MtrunA17_Chr7g0233881 45.000 140 63 3 121 247 820 958 4.78e-27 110
Msa1048640 MtrunA17_Chr7g0233881 43.434 99 50 2 42 135 619 716 1.44e-18 85.5
Msa1048640 MtrunA17_Chr7g0250381 44.755 143 70 3 121 257 921 1060 5.18e-27 110
Msa1048640 MtrunA17_Chr7g0250381 55.172 58 26 0 63 120 743 800 1.81e-16 79.3
Msa1048640 MtrunA17_Chr7g0232631 50.400 125 56 3 121 240 870 993 5.19e-27 110
Msa1048640 MtrunA17_Chr7g0232631 40.000 130 61 5 6 121 626 752 6.29e-19 86.3
Msa1048640 MtrunA17_Chr7g0250351 47.328 131 60 3 121 245 713 840 1.28e-26 108
Msa1048640 MtrunA17_Chr7g0250351 41.250 80 43 1 41 120 517 592 3.27e-15 75.5
Msa1048640 MtrunA17_Chr1g0165281 45.968 124 61 2 121 239 796 918 1.34e-26 108
Msa1048640 MtrunA17_Chr1g0165281 47.945 73 37 1 66 138 623 694 2.82e-17 81.6
Msa1048640 MtrunA17_Chr1g0165241 45.968 124 61 2 121 239 796 918 1.34e-26 108
Msa1048640 MtrunA17_Chr1g0165241 47.945 73 37 1 66 138 623 694 2.82e-17 81.6
Msa1048640 MtrunA17_Chr1g0165311 45.968 124 61 2 121 239 796 918 1.34e-26 108
Msa1048640 MtrunA17_Chr1g0165311 47.945 73 37 1 66 138 623 694 2.82e-17 81.6
Msa1048640 MtrunA17_Chr7g0232211 47.107 121 61 2 121 239 955 1074 1.74e-26 108
Msa1048640 MtrunA17_Chr7g0232211 56.364 55 24 0 66 120 782 836 6.87e-17 80.5
Msa1048640 MtrunA17_Chr7g0261331 43.972 141 74 4 121 257 1080 1219 2.28e-25 105
Msa1048640 MtrunA17_Chr7g0261331 47.059 51 27 0 70 120 909 959 1.81e-13 70.5
Msa1048640 MtrunA17_Chr7g0232611 48.182 110 51 3 121 225 72 180 1.04e-23 94.7
Msa1048640 MtrunA17_Chr7g0232471 38.931 131 63 5 5 121 22 149 3.37e-18 82.8
Msa1048640 MtrunA17_Chr1g0165981 45.833 96 44 2 152 239 479 574 1.62e-17 82.0
Msa1048640 MtrunA17_Chr1g0165921 56.452 62 25 1 66 127 606 665 2.67e-17 81.6
Msa1048640 MtrunA17_Chr2g0312651 37.705 122 67 3 121 234 958 1078 3.03e-17 81.6
Msa1048640 MtrunA17_Chr7g0250421 47.761 67 35 0 54 120 105 171 1.09e-16 77.0
Msa1048640 MtrunA17_Chr4g0054521 39.683 126 62 4 121 236 837 958 4.35e-16 78.2
Msa1048640 MtrunA17_Chr7g0216271 76.190 42 10 0 149 190 1 42 7.71e-16 70.1
Msa1048640 MtrunA17_Chr5g0400681 38.889 126 63 4 121 236 840 961 3.40e-15 75.5
Msa1048640 MtrunA17_Chr1g0169841 38.053 113 60 3 128 231 968 1079 4.07e-15 75.1
Msa1048640 MtrunA17_Chr1g0189871 38.793 116 61 3 128 234 958 1072 1.37e-14 73.6
Msa1048640 MtrunA17_Chr2g0277081 42.857 112 48 5 135 236 851 956 1.66e-14 73.6
Msa1048640 MtrunA17_Chr3g0140861 36.923 130 66 3 117 236 809 932 3.58e-14 72.4
Msa1048640 MtrunA17_Chr3g0095081 38.400 125 62 5 121 234 875 995 3.86e-14 72.4
Msa1048640 MtrunA17_Chr8g0355381 50.000 62 30 1 77 138 1 61 5.51e-14 66.6
Msa1048640 MtrunA17_Chr1g0201241 32.402 179 87 8 88 234 818 994 2.35e-13 70.1
Msa1048640 MtrunA17_Chr3g0140871 37.500 128 65 4 117 236 837 957 4.06e-13 69.3
Msa1048640 MtrunA17_Chr4g0035464 41.593 113 49 4 135 234 848 956 5.92e-13 68.6
Msa1048640 MtrunA17_Chr4g0017251 35.433 127 71 2 121 239 825 948 6.09e-13 68.6
Msa1048640 MtrunA17_Chr3g0125491 37.500 112 58 3 132 235 216 323 7.35e-13 67.8
Msa1048640 MtrunA17_Chr2g0333691 35.507 138 76 3 135 263 282 415 8.57e-13 67.8
Msa1048640 MtrunA17_Chr2g0314861 37.500 112 57 4 132 234 80 187 9.15e-13 66.6
Msa1048640 MtrunA17_Chr5g0419721 42.000 100 54 3 135 231 812 910 9.70e-13 68.2
Msa1048640 MtrunA17_Chr2g0293071 27.461 193 116 5 64 235 137 326 3.00e-12 66.2
Msa1048640 MtrunA17_Chr1g0170201 26.222 225 136 5 46 245 409 628 3.66e-12 66.2
Msa1048640 MtrunA17_Chr5g0442151 39.091 110 55 4 136 236 848 954 3.69e-12 66.2
Msa1048640 MtrunA17_Chr1g0204461 35.294 119 66 3 132 244 834 947 4.61e-12 66.2
Msa1048640 MtrunA17_Chr4g0064201 37.097 124 62 3 132 246 278 394 4.87e-12 65.5
Msa1048640 MtrunA17_Chr3g0102451 33.835 133 77 3 121 245 474 603 4.94e-12 65.9
Msa1048640 MtrunA17_Chr2g0334191 35.659 129 68 5 121 236 940 1066 5.08e-12 65.9
Msa1048640 MtrunA17_Chr3g0137191 36.364 121 68 3 135 248 226 344 5.47e-12 65.1
Msa1048640 MtrunA17_Chr3g0126181 33.929 112 64 2 133 235 928 1038 5.73e-12 65.9
Msa1048640 MtrunA17_Chr3g0078761 34.400 125 69 5 121 236 494 614 7.57e-12 65.1
Msa1048640 MtrunA17_Chr6g0487061 40.566 106 54 3 135 234 870 972 9.83e-12 65.1
Msa1048640 MtrunA17_Chr7g0237821 38.614 101 57 3 135 231 964 1063 1.12e-11 65.1
Msa1048640 MtrunA17_Chr8g0345561 34.615 130 72 3 114 234 951 1076 1.19e-11 64.7
Msa1048640 MtrunA17_Chr7g0274661 35.433 127 68 4 121 236 519 642 1.37e-11 64.3
Msa1048640 MtrunA17_Chr2g0319101 32.174 115 71 3 136 246 271 382 1.52e-11 63.9
Msa1048640 MtrunA17_Chr5g0409041 35.537 121 73 3 121 236 451 571 1.57e-11 64.3
Msa1048640 MtrunA17_Chr2g0293081 26.500 200 109 5 64 235 474 663 1.58e-11 64.3
Msa1048640 MtrunA17_Chr4g0051961 35.200 125 69 4 124 239 1028 1149 1.66e-11 64.3
Msa1048640 MtrunA17_Chr7g0248904 32.704 159 93 5 121 270 509 662 1.72e-11 64.3
Msa1048640 MtrunA17_Chr2g0314881 39.286 112 55 4 132 234 389 496 1.73e-11 63.9
Msa1048640 MtrunA17_Chr4g0018701 34.454 119 68 3 121 231 872 988 2.88e-11 63.5
Msa1048640 MtrunA17_Chr2g0320111 33.333 156 81 5 117 253 233 384 2.96e-11 63.2
Msa1048640 MtrunA17_Chr2g0280191 33.871 124 70 2 121 236 841 960 3.92e-11 63.2
Msa1048640 MtrunA17_Chr2g0314841 38.393 112 56 4 132 234 821 928 4.17e-11 63.2
Msa1048640 MtrunA17_Chr2g0314821 38.393 112 56 4 132 234 824 931 4.22e-11 63.2
Msa1048640 MtrunA17_Chr8g0379931 36.800 125 63 4 121 234 855 974 4.44e-11 63.2
Msa1048640 MtrunA17_Chr2g0333181 36.111 108 58 2 132 231 200 304 4.78e-11 62.4
Msa1048640 MtrunA17_Chr4g0046511 37.615 109 58 2 132 234 858 962 6.53e-11 62.8
Msa1048640 MtrunA17_Chr2g0317071 34.146 123 69 3 121 234 942 1061 7.75e-11 62.4
Msa1048640 MtrunA17_Chr2g0324931 39.048 105 62 2 132 234 855 959 8.67e-11 62.4
Msa1048640 MtrunA17_Chr5g0400701 30.496 141 71 4 121 236 855 993 9.45e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1048640 AT1G35710.1 47.500 120 58 2 121 238 1003 1119 1.28e-28 115
Msa1048640 AT4G08850.1 45.378 119 63 2 121 238 927 1044 6.79e-27 110
Msa1048640 AT4G08850.1 41.463 82 44 2 39 120 728 805 3.08e-14 73.2
Msa1048640 AT5G49660.1 38.760 129 65 3 121 239 810 934 1.00e-15 77.4
Msa1048640 AT1G17230.1 38.596 114 62 2 128 234 956 1068 1.52e-15 77.0
Msa1048640 AT1G17230.2 38.596 114 62 2 128 234 956 1068 1.66e-15 76.6
Msa1048640 AT2G33170.2 40.351 114 61 1 128 234 982 1095 1.74e-15 76.6
Msa1048640 AT2G33170.1 40.351 114 61 1 128 234 982 1095 1.74e-15 76.6
Msa1048640 AT5G65700.1 37.500 136 69 5 121 244 842 973 1.15e-14 74.3
Msa1048640 AT5G65700.2 37.500 136 69 5 121 244 842 973 1.15e-14 74.3
Msa1048640 AT4G08850.2 41.463 82 44 2 39 120 728 805 4.95e-14 72.4
Msa1048640 AT5G63930.1 37.719 114 63 2 128 234 962 1074 1.04e-13 71.2
Msa1048640 AT5G63930.2 37.719 114 63 2 128 234 898 1010 1.10e-13 71.2
Msa1048640 AT3G49670.1 38.889 126 63 5 121 236 838 959 1.62e-13 70.9
Msa1048640 AT1G34420.1 38.739 111 63 2 128 234 850 959 2.84e-13 70.1
Msa1048640 AT5G48940.1 38.938 113 64 4 126 235 950 1060 9.26e-13 68.6
Msa1048640 AT3G19700.1 34.559 136 74 4 121 244 836 968 1.06e-12 68.6
Msa1048640 AT5G02290.2 36.567 134 69 3 132 256 238 364 2.50e-12 66.6
Msa1048640 AT5G02290.1 36.567 134 69 3 132 256 238 364 2.50e-12 66.6
Msa1048640 AT1G09970.1 35.714 112 60 2 133 236 842 949 3.07e-12 67.0
Msa1048640 AT4G20270.1 36.937 111 57 3 135 236 875 981 3.23e-12 67.0
Msa1048640 AT3G24240.1 39.048 105 59 3 135 235 957 1060 3.41e-12 67.0
Msa1048640 AT1G31420.2 34.615 130 79 4 121 244 451 580 3.64e-12 66.6
Msa1048640 AT1G31420.1 34.615 130 79 4 121 244 452 581 3.74e-12 66.6
Msa1048640 AT1G31420.3 34.615 130 79 4 121 244 452 581 3.74e-12 66.6
Msa1048640 AT5G60300.1 32.911 158 87 5 93 234 454 608 8.74e-12 65.5
Msa1048640 AT5G60300.2 32.911 158 87 5 93 234 454 608 8.74e-12 65.5
Msa1048640 AT5G60300.3 32.911 158 87 5 93 234 454 608 8.92e-12 65.5
Msa1048640 AT5G62710.2 36.290 124 63 4 123 236 429 546 9.64e-12 65.5
Msa1048640 AT1G34110.2 29.121 182 88 5 88 234 870 1045 1.00e-11 65.5
Msa1048640 AT5G62710.1 36.290 124 63 4 123 236 463 580 1.05e-11 65.1
Msa1048640 AT4G28650.1 34.454 119 68 2 121 231 853 969 1.08e-11 65.5
Msa1048640 AT1G34110.1 29.121 182 88 5 88 234 870 1045 1.10e-11 65.5
Msa1048640 AT5G56790.1 34.746 118 66 2 125 234 542 656 1.54e-11 64.7
Msa1048640 AT5G25930.1 38.679 106 56 3 135 234 858 960 1.71e-11 64.7
Msa1048640 AT1G75820.1 34.211 114 56 3 135 234 855 963 1.81e-11 64.7
Msa1048640 AT1G01540.2 33.884 121 68 4 121 232 302 419 2.51e-11 63.9
Msa1048640 AT4G01330.1 33.058 121 69 4 121 232 310 427 2.83e-11 63.9
Msa1048640 AT4G01330.2 33.058 121 69 4 121 232 310 427 2.88e-11 63.9
Msa1048640 AT4G01330.3 33.058 121 69 4 121 232 310 427 3.16e-11 63.5
Msa1048640 AT5G54590.3 35.238 105 61 3 136 236 273 374 4.10e-11 63.2
Msa1048640 AT5G54590.4 35.238 105 61 3 136 236 273 374 4.10e-11 63.2
Msa1048640 AT5G54590.2 35.238 105 61 3 136 236 273 374 4.10e-11 63.2
Msa1048640 AT1G69730.1 24.519 208 124 5 79 260 536 736 4.24e-11 63.5
Msa1048640 AT1G54820.1 35.075 134 73 4 115 239 301 429 4.58e-11 63.2
Msa1048640 AT4G02010.1 38.393 112 57 2 136 238 547 655 6.31e-11 62.8
Msa1048640 AT3G55450.1 35.897 117 63 2 132 239 232 345 7.67e-11 62.4
Msa1048640 AT4G26540.1 31.579 152 83 5 129 261 922 1071 8.84e-11 62.8
Msa1048640 AT1G17910.1 27.778 162 92 4 97 238 569 725 9.34e-11 62.4

Find 58 sgRNAs with CRISPR-Local

Find 214 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACACTCAACTTAATTAATT+TGG 0.124221 7_2:-10369747 None:intergenic
ATAACCATGAAGCTTCTTTA+AGG 0.136931 7_2:-10368421 None:intergenic
AGTAAAACCATCGCATTATT+TGG 0.192841 7_2:-10369520 None:intergenic
TCTCTGTAATGTCACTAATT+TGG 0.232714 7_2:+10367972 Msa1048640:CDS
CTTTACTTTATTACCTTTCT+TGG 0.237957 7_2:-10368122 None:intergenic
ACCATCGCTGCTGGAACTAT+TGG 0.303932 7_2:+10368825 Msa1048640:CDS
GTTGCCTTAAAGAAGCTTCA+TGG 0.348885 7_2:+10368417 Msa1048640:CDS
ACTCTCGACCAACAATGAAT+TGG 0.355229 7_2:+10369596 Msa1048640:CDS
TGCATTGGGACCGGAGCATA+TGG 0.389458 7_2:+10368357 Msa1048640:CDS
TGCGATACCCAATTCATTGT+TGG 0.403512 7_2:-10369604 None:intergenic
TGCAGAACTTGCCTATACTA+TGG 0.404836 7_2:+10369345 Msa1048640:intron
CTTCAATTAGCATCAACTTC+AGG 0.411341 7_2:+10369457 Msa1048640:CDS
TTTACTCACAACCATAGTAT+AGG 0.412771 7_2:-10369356 None:intergenic
TAGTGACATTACAGAGAGAT+TGG 0.416125 7_2:-10367966 None:intergenic
AGTGGCACTTGAAACTTTGA+TGG 0.432153 7_2:+10369405 Msa1048640:CDS
CTCTCGACCAACAATGAATT+GGG 0.452803 7_2:+10369597 Msa1048640:CDS
ACTTTATTACCTTTCTTGGT+AGG 0.457463 7_2:-10368118 None:intergenic
TTGACATTAGATATTGCATT+GGG 0.460189 7_2:+10368343 Msa1048640:CDS
CCTTTCTTGGTAGGCGGGCA+AGG 0.461099 7_2:-10368109 None:intergenic
TCTAATCGAACCATCGCTGC+TGG 0.461842 7_2:+10368816 Msa1048640:CDS
CATTTCCTACAATTATTTGA+GGG 0.461914 7_2:+10367996 Msa1048640:CDS
AGTGACATTACAGAGAGATT+GGG 0.464648 7_2:-10367965 None:intergenic
ACTTTGATGGGAAGACACCC+TGG 0.465418 7_2:+10369418 Msa1048640:CDS
TCTTGGTAGGCGGGCAAGGT+TGG 0.476997 7_2:-10368105 None:intergenic
AAGTGTGATGTATATAGCTT+TGG 0.484113 7_2:+10369379 Msa1048640:CDS
AACACAACGACGTCAAAGAA+TGG 0.494238 7_2:+10368249 Msa1048640:CDS
ACATTTCCTACAATTATTTG+AGG 0.494333 7_2:+10367995 Msa1048640:CDS
GATTAGATGAATCATATTGA+AGG 0.511783 7_2:-10368800 None:intergenic
TTCATTGTTGGTCGAGAGTG+AGG 0.518867 7_2:-10369592 None:intergenic
ACCATCGCATTATTTGGAAG+TGG 0.519929 7_2:-10369514 None:intergenic
GGATCAATACACAATGGGAT+TGG 0.520145 7_2:-10368022 None:intergenic
TTATTACCTTTCTTGGTAGG+CGG 0.522877 7_2:-10368115 None:intergenic
ATTAGATATTGCATTGGGAC+CGG 0.524658 7_2:+10368348 Msa1048640:CDS
TGTATATAGCTTTGGAGTAG+TGG 0.533127 7_2:+10369387 Msa1048640:CDS
TCACTCAAAGAAATGTGTAA+TGG 0.533224 7_2:-10369649 None:intergenic
TATTACCTTTCTTGGTAGGC+GGG 0.535028 7_2:-10368114 None:intergenic
TTTGGAAGTATAACTTTCAG+AGG 0.548184 7_2:-10369729 None:intergenic
TCCAATAGTTCCAGCAGCGA+TGG 0.551251 7_2:-10368826 None:intergenic
AGTGATGTCAATATATCCCC+AGG 0.554057 7_2:-10369436 None:intergenic
ACTATTGGATACATAGCTCC+TGG 0.556879 7_2:+10368840 Msa1048640:CDS
AATGTGTAATGGTGTAAGCT+TGG 0.557410 7_2:-10369638 None:intergenic
TAAGCATGCAAATGCTACTA+CGG 0.557631 7_2:-10369560 None:intergenic
CCCACTTCCAAATAATGCGA+TGG 0.567786 7_2:+10369513 Msa1048640:CDS
TTTGACATTAGATATTGCAT+TGG 0.568348 7_2:+10368342 Msa1048640:CDS
CCATCGCATTATTTGGAAGT+GGG 0.568583 7_2:-10369513 None:intergenic
GTAAACACTTCCATATGCTC+CGG 0.571541 7_2:-10368367 None:intergenic
TTTGAAGCACACGATGAATG+AGG 0.586874 7_2:-10368193 None:intergenic
CTTTGATGGGAAGACACCCT+GGG 0.591984 7_2:+10369419 Msa1048640:CDS
AGCATATGGAAGTGTTTACA+AGG 0.595238 7_2:+10368371 Msa1048640:CDS
TCATTGTTGGTCGAGAGTGA+GGG 0.599905 7_2:-10369591 None:intergenic
GTGACATTACAGAGAGATTG+GGG 0.601036 7_2:-10367964 None:intergenic
TATTTGGAAGTGGGAGACGT+TGG 0.606475 7_2:-10369504 None:intergenic
TTTCCTACAATTATTTGAGG+GGG 0.608624 7_2:+10367998 Msa1048640:CDS
ATTTCCTACAATTATTTGAG+GGG 0.610595 7_2:+10367997 Msa1048640:CDS
GTGGCACTTGAAACTTTGAT+GGG 0.624764 7_2:+10369406 Msa1048640:CDS
GTGATGTCAATATATCCCCA+GGG 0.688646 7_2:-10369435 None:intergenic
TACAAGGCACAATTACCATG+TGG 0.705220 7_2:+10368387 Msa1048640:CDS
TTTGATGGGAAGACACCCTG+GGG 0.766027 7_2:+10369420 Msa1048640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAATAAATTAATTT+AGG - chr7_2:10369082-10369101 None:intergenic 0.0%
!! TAAAAAAAATAAATTAATTT+AGG - chr7_2:10369082-10369101 None:intergenic 0.0%
!! AAGTGAAAATATAAAAATTA+TGG + chr7_2:10369260-10369279 Msa1048640:intron 10.0%
!! AAGTGAAAATATAAAAATTA+TGG + chr7_2:10369260-10369279 Msa1048640:intron 10.0%
!! AAAATATAAAAATTATGGAG+TGG + chr7_2:10369265-10369284 Msa1048640:intron 15.0%
!! AAAATATAAAAATTATGGAG+TGG + chr7_2:10369265-10369284 Msa1048640:intron 15.0%
!!! TTTTGTATATGGAATTATGA+CGG + chr7_2:10368279-10368298 Msa1048640:CDS 20.0%
!! TCACTTATATAAAGAAAAAC+AGG - chr7_2:10369246-10369265 None:intergenic 20.0%
!!! TTTTGTATATGGAATTATGA+CGG + chr7_2:10368279-10368298 Msa1048640:CDS 20.0%
!! TCACTTATATAAAGAAAAAC+AGG - chr7_2:10369246-10369265 None:intergenic 20.0%
! ACATTTCCTACAATTATTTG+AGG + chr7_2:10367995-10368014 Msa1048640:CDS 25.0%
! CATTTCCTACAATTATTTGA+GGG + chr7_2:10367996-10368015 Msa1048640:CDS 25.0%
! ATTTCCTACAATTATTTGAG+GGG + chr7_2:10367997-10368016 Msa1048640:CDS 25.0%
!! GTATTAACTTTTTGTACAAG+AGG + chr7_2:10368074-10368093 Msa1048640:intron 25.0%
! CTTTACTTTATTACCTTTCT+TGG - chr7_2:10368125-10368144 None:intergenic 25.0%
! TAAGATTAGACTAATAGGAT+AGG - chr7_2:10368169-10368188 None:intergenic 25.0%
!!! ATGGAGATTTGTTTTGTATA+TGG + chr7_2:10368268-10368287 Msa1048640:CDS 25.0%
! TTTGACATTAGATATTGCAT+TGG + chr7_2:10368342-10368361 Msa1048640:CDS 25.0%
! TTGACATTAGATATTGCATT+GGG + chr7_2:10368343-10368362 Msa1048640:CDS 25.0%
! CATAAAGCTTCACAATATTT+CGG - chr7_2:10368515-10368534 None:intergenic 25.0%
! GATTAGATGAATCATATTGA+AGG - chr7_2:10368803-10368822 None:intergenic 25.0%
! AGAGAAATGAATAATTTACC+AGG - chr7_2:10368861-10368880 None:intergenic 25.0%
!! GAACATCTATGTTATTTATG+TGG - chr7_2:10368945-10368964 None:intergenic 25.0%
! TATCTCTTTCAAAGTGTATT+CGG + chr7_2:10369136-10369155 Msa1048640:intron 25.0%
! GTTTGACAAATTCATAAACA+CGG + chr7_2:10369174-10369193 Msa1048640:intron 25.0%
! TTTGACAAATTCATAAACAC+GGG + chr7_2:10369175-10369194 Msa1048640:intron 25.0%
! GACACTCAACTTAATTAATT+TGG - chr7_2:10369750-10369769 None:intergenic 25.0%
! ACATTTCCTACAATTATTTG+AGG + chr7_2:10367995-10368014 Msa1048640:CDS 25.0%
! CATTTCCTACAATTATTTGA+GGG + chr7_2:10367996-10368015 Msa1048640:CDS 25.0%
! ATTTCCTACAATTATTTGAG+GGG + chr7_2:10367997-10368016 Msa1048640:CDS 25.0%
!! GTATTAACTTTTTGTACAAG+AGG + chr7_2:10368074-10368093 Msa1048640:intron 25.0%
! CTTTACTTTATTACCTTTCT+TGG - chr7_2:10368125-10368144 None:intergenic 25.0%
! TAAGATTAGACTAATAGGAT+AGG - chr7_2:10368169-10368188 None:intergenic 25.0%
!!! ATGGAGATTTGTTTTGTATA+TGG + chr7_2:10368268-10368287 Msa1048640:CDS 25.0%
! TTTGACATTAGATATTGCAT+TGG + chr7_2:10368342-10368361 Msa1048640:CDS 25.0%
! TTGACATTAGATATTGCATT+GGG + chr7_2:10368343-10368362 Msa1048640:CDS 25.0%
! CATAAAGCTTCACAATATTT+CGG - chr7_2:10368515-10368534 None:intergenic 25.0%
! GATTAGATGAATCATATTGA+AGG - chr7_2:10368803-10368822 None:intergenic 25.0%
! AGAGAAATGAATAATTTACC+AGG - chr7_2:10368861-10368880 None:intergenic 25.0%
!! GAACATCTATGTTATTTATG+TGG - chr7_2:10368945-10368964 None:intergenic 25.0%
! TATCTCTTTCAAAGTGTATT+CGG + chr7_2:10369136-10369155 Msa1048640:intron 25.0%
! GTTTGACAAATTCATAAACA+CGG + chr7_2:10369174-10369193 Msa1048640:intron 25.0%
! TTTGACAAATTCATAAACAC+GGG + chr7_2:10369175-10369194 Msa1048640:intron 25.0%
! GACACTCAACTTAATTAATT+TGG - chr7_2:10369750-10369769 None:intergenic 25.0%
TCTCTGTAATGTCACTAATT+TGG + chr7_2:10367972-10367991 Msa1048640:CDS 30.0%
TTTCCTACAATTATTTGAGG+GGG + chr7_2:10367998-10368017 Msa1048640:CDS 30.0%
CATAAGGATCAATACACAAT+GGG - chr7_2:10368030-10368049 None:intergenic 30.0%
ATTGATCCTTATGCAGTATT+AGG + chr7_2:10368037-10368056 Msa1048640:intron 30.0%
TTGATCCTTATGCAGTATTA+GGG + chr7_2:10368038-10368057 Msa1048640:intron 30.0%
ACTTTATTACCTTTCTTGGT+AGG - chr7_2:10368121-10368140 None:intergenic 30.0%
GAGACTAAGATTAGACTAAT+AGG - chr7_2:10368174-10368193 None:intergenic 30.0%
ATAACCATGAAGCTTCTTTA+AGG - chr7_2:10368424-10368443 None:intergenic 30.0%
CGAAATATTGTGAAGCTTTA+TGG + chr7_2:10368513-10368532 Msa1048640:intron 30.0%
! GTTTTTGATCTATGAGTACA+TGG + chr7_2:10368560-10368579 Msa1048640:intron 30.0%
! TTTTCTCCAATTGAATTCCA+CGG - chr7_2:10368628-10368647 None:intergenic 30.0%
TGGAATTCAATTGGAGAAAA+AGG + chr7_2:10368628-10368647 Msa1048640:intron 30.0%
AAAAGGCTTAATGTTGTGAA+AGG + chr7_2:10368645-10368664 Msa1048640:intron 30.0%
TCATGTTATGCACACATAAA+AGG - chr7_2:10368911-10368930 None:intergenic 30.0%
ATATTTAGAGACAATGCTAC+TGG - chr7_2:10369001-10369020 None:intergenic 30.0%
! TTCATAAACACGGGTATTTT+TGG + chr7_2:10369184-10369203 Msa1048640:intron 30.0%
AATCACCATGAGTAGATTAA+AGG - chr7_2:10369316-10369335 None:intergenic 30.0%
TTTACTCACAACCATAGTAT+AGG - chr7_2:10369359-10369378 None:intergenic 30.0%
AAGTGTGATGTATATAGCTT+TGG + chr7_2:10369379-10369398 Msa1048640:CDS 30.0%
AGTAAAACCATCGCATTATT+TGG - chr7_2:10369523-10369542 None:intergenic 30.0%
TCACTCAAAGAAATGTGTAA+TGG - chr7_2:10369652-10369671 None:intergenic 30.0%
! TTTGGAAGTATAACTTTCAG+AGG - chr7_2:10369732-10369751 None:intergenic 30.0%
TCTCTGTAATGTCACTAATT+TGG + chr7_2:10367972-10367991 Msa1048640:CDS 30.0%
TTTCCTACAATTATTTGAGG+GGG + chr7_2:10367998-10368017 Msa1048640:CDS 30.0%
CATAAGGATCAATACACAAT+GGG - chr7_2:10368030-10368049 None:intergenic 30.0%
ATTGATCCTTATGCAGTATT+AGG + chr7_2:10368037-10368056 Msa1048640:intron 30.0%
TTGATCCTTATGCAGTATTA+GGG + chr7_2:10368038-10368057 Msa1048640:intron 30.0%
ACTTTATTACCTTTCTTGGT+AGG - chr7_2:10368121-10368140 None:intergenic 30.0%
GAGACTAAGATTAGACTAAT+AGG - chr7_2:10368174-10368193 None:intergenic 30.0%
ATAACCATGAAGCTTCTTTA+AGG - chr7_2:10368424-10368443 None:intergenic 30.0%
CGAAATATTGTGAAGCTTTA+TGG + chr7_2:10368513-10368532 Msa1048640:intron 30.0%
! GTTTTTGATCTATGAGTACA+TGG + chr7_2:10368560-10368579 Msa1048640:intron 30.0%
! TTTTCTCCAATTGAATTCCA+CGG - chr7_2:10368628-10368647 None:intergenic 30.0%
TGGAATTCAATTGGAGAAAA+AGG + chr7_2:10368628-10368647 Msa1048640:intron 30.0%
AAAAGGCTTAATGTTGTGAA+AGG + chr7_2:10368645-10368664 Msa1048640:intron 30.0%
TCATGTTATGCACACATAAA+AGG - chr7_2:10368911-10368930 None:intergenic 30.0%
ATATTTAGAGACAATGCTAC+TGG - chr7_2:10369001-10369020 None:intergenic 30.0%
! TTCATAAACACGGGTATTTT+TGG + chr7_2:10369184-10369203 Msa1048640:intron 30.0%
AATCACCATGAGTAGATTAA+AGG - chr7_2:10369316-10369335 None:intergenic 30.0%
TTTACTCACAACCATAGTAT+AGG - chr7_2:10369359-10369378 None:intergenic 30.0%
AAGTGTGATGTATATAGCTT+TGG + chr7_2:10369379-10369398 Msa1048640:CDS 30.0%
AGTAAAACCATCGCATTATT+TGG - chr7_2:10369523-10369542 None:intergenic 30.0%
TCACTCAAAGAAATGTGTAA+TGG - chr7_2:10369652-10369671 None:intergenic 30.0%
! TTTGGAAGTATAACTTTCAG+AGG - chr7_2:10369732-10369751 None:intergenic 30.0%
AGTGACATTACAGAGAGATT+GGG - chr7_2:10367968-10367987 None:intergenic 35.0%
TAGTGACATTACAGAGAGAT+TGG - chr7_2:10367969-10367988 None:intergenic 35.0%
GCATAAGGATCAATACACAA+TGG - chr7_2:10368031-10368050 None:intergenic 35.0%
TTGTTCCCTAATACTGCATA+AGG - chr7_2:10368046-10368065 None:intergenic 35.0%
TTATGCAGTATTAGGGAACA+AGG + chr7_2:10368045-10368064 Msa1048640:intron 35.0%
TTATTACCTTTCTTGGTAGG+CGG - chr7_2:10368118-10368137 None:intergenic 35.0%
ATTAGATATTGCATTGGGAC+CGG + chr7_2:10368348-10368367 Msa1048640:CDS 35.0%
!! AGCATATGGAAGTGTTTACA+AGG + chr7_2:10368371-10368390 Msa1048640:CDS 35.0%
! AAGGCAACAATTTTTCCACA+TGG - chr7_2:10368405-10368424 None:intergenic 35.0%
ATCTATGAGTACATGGAGAA+AGG + chr7_2:10368567-10368586 Msa1048640:intron 35.0%
GATACATCTCTATGCACTAT+TGG - chr7_2:10368714-10368733 None:intergenic 35.0%
ATATCTTGCTAAACTACGAG+TGG + chr7_2:10368742-10368761 Msa1048640:intron 35.0%
! AATCCTAGTGTTTCTGACTT+TGG + chr7_2:10368765-10368784 Msa1048640:intron 35.0%
TGCATCCTTTAATCTACTCA+TGG + chr7_2:10369308-10369327 Msa1048640:intron 35.0%
!! TGTATATAGCTTTGGAGTAG+TGG + chr7_2:10369387-10369406 Msa1048640:CDS 35.0%
CTTCAATTAGCATCAACTTC+AGG + chr7_2:10369457-10369476 Msa1048640:CDS 35.0%
TAAGCATGCAAATGCTACTA+CGG - chr7_2:10369563-10369582 None:intergenic 35.0%
AATGTGTAATGGTGTAAGCT+TGG - chr7_2:10369641-10369660 None:intergenic 35.0%
AGTGACATTACAGAGAGATT+GGG - chr7_2:10367968-10367987 None:intergenic 35.0%
TAGTGACATTACAGAGAGAT+TGG - chr7_2:10367969-10367988 None:intergenic 35.0%
GCATAAGGATCAATACACAA+TGG - chr7_2:10368031-10368050 None:intergenic 35.0%
TTGTTCCCTAATACTGCATA+AGG - chr7_2:10368046-10368065 None:intergenic 35.0%
TTATGCAGTATTAGGGAACA+AGG + chr7_2:10368045-10368064 Msa1048640:intron 35.0%
TTATTACCTTTCTTGGTAGG+CGG - chr7_2:10368118-10368137 None:intergenic 35.0%
ATTAGATATTGCATTGGGAC+CGG + chr7_2:10368348-10368367 Msa1048640:CDS 35.0%
!! AGCATATGGAAGTGTTTACA+AGG + chr7_2:10368371-10368390 Msa1048640:CDS 35.0%
! AAGGCAACAATTTTTCCACA+TGG - chr7_2:10368405-10368424 None:intergenic 35.0%
ATCTATGAGTACATGGAGAA+AGG + chr7_2:10368567-10368586 Msa1048640:intron 35.0%
GATACATCTCTATGCACTAT+TGG - chr7_2:10368714-10368733 None:intergenic 35.0%
ATATCTTGCTAAACTACGAG+TGG + chr7_2:10368742-10368761 Msa1048640:intron 35.0%
! AATCCTAGTGTTTCTGACTT+TGG + chr7_2:10368765-10368784 Msa1048640:intron 35.0%
TGCATCCTTTAATCTACTCA+TGG + chr7_2:10369308-10369327 Msa1048640:intron 35.0%
!! TGTATATAGCTTTGGAGTAG+TGG + chr7_2:10369387-10369406 Msa1048640:CDS 35.0%
CTTCAATTAGCATCAACTTC+AGG + chr7_2:10369457-10369476 Msa1048640:CDS 35.0%
TAAGCATGCAAATGCTACTA+CGG - chr7_2:10369563-10369582 None:intergenic 35.0%
AATGTGTAATGGTGTAAGCT+TGG - chr7_2:10369641-10369660 None:intergenic 35.0%
GTGACATTACAGAGAGATTG+GGG - chr7_2:10367967-10367986 None:intergenic 40.0%
GGATCAATACACAATGGGAT+TGG - chr7_2:10368025-10368044 None:intergenic 40.0%
TATTACCTTTCTTGGTAGGC+GGG - chr7_2:10368117-10368136 None:intergenic 40.0%
TAGGAAGAGCAATGAAGACA+TGG - chr7_2:10368150-10368169 None:intergenic 40.0%
! TTTGAAGCACACGATGAATG+AGG - chr7_2:10368196-10368215 None:intergenic 40.0%
AACACAACGACGTCAAAGAA+TGG + chr7_2:10368249-10368268 Msa1048640:CDS 40.0%
GTAAACACTTCCATATGCTC+CGG - chr7_2:10368370-10368389 None:intergenic 40.0%
TACAAGGCACAATTACCATG+TGG + chr7_2:10368387-10368406 Msa1048640:CDS 40.0%
GTTGCCTTAAAGAAGCTTCA+TGG + chr7_2:10368417-10368436 Msa1048640:CDS 40.0%
CTGAAACTCTCGTCAAAAGA+TGG - chr7_2:10368459-10368478 None:intergenic 40.0%
TAGAAGCCGTGGAATTCAAT+TGG + chr7_2:10368619-10368638 Msa1048640:intron 40.0%
!! GTTGTGAAAGGTGTTGCATT+TGG + chr7_2:10368657-10368676 Msa1048640:intron 40.0%
ATCTCTATGCACTATTGGAG+GGG - chr7_2:10368709-10368728 None:intergenic 40.0%
CATCTCTATGCACTATTGGA+GGG - chr7_2:10368710-10368729 None:intergenic 40.0%
ACATCTCTATGCACTATTGG+AGG - chr7_2:10368711-10368730 None:intergenic 40.0%
GTTCCAAAGTCAGAAACACT+AGG - chr7_2:10368771-10368790 None:intergenic 40.0%
ACTATTGGATACATAGCTCC+TGG + chr7_2:10368840-10368859 Msa1048640:CDS 40.0%
AAAGTGTATTCGGAGATGCA+AGG + chr7_2:10369146-10369165 Msa1048640:intron 40.0%
TGCAGAACTTGCCTATACTA+TGG + chr7_2:10369345-10369364 Msa1048640:intron 40.0%
AGTGGCACTTGAAACTTTGA+TGG + chr7_2:10369405-10369424 Msa1048640:CDS 40.0%
GTGGCACTTGAAACTTTGAT+GGG + chr7_2:10369406-10369425 Msa1048640:CDS 40.0%
GTGATGTCAATATATCCCCA+GGG - chr7_2:10369438-10369457 None:intergenic 40.0%
AGTGATGTCAATATATCCCC+AGG - chr7_2:10369439-10369458 None:intergenic 40.0%
CCATCGCATTATTTGGAAGT+GGG - chr7_2:10369516-10369535 None:intergenic 40.0%
ACCATCGCATTATTTGGAAG+TGG - chr7_2:10369517-10369536 None:intergenic 40.0%
ACTCTCGACCAACAATGAAT+TGG + chr7_2:10369596-10369615 Msa1048640:CDS 40.0%
CTCTCGACCAACAATGAATT+GGG + chr7_2:10369597-10369616 Msa1048640:CDS 40.0%
TGCGATACCCAATTCATTGT+TGG - chr7_2:10369607-10369626 None:intergenic 40.0%
GTGACATTACAGAGAGATTG+GGG - chr7_2:10367967-10367986 None:intergenic 40.0%
GGATCAATACACAATGGGAT+TGG - chr7_2:10368025-10368044 None:intergenic 40.0%
TATTACCTTTCTTGGTAGGC+GGG - chr7_2:10368117-10368136 None:intergenic 40.0%
TAGGAAGAGCAATGAAGACA+TGG - chr7_2:10368150-10368169 None:intergenic 40.0%
! TTTGAAGCACACGATGAATG+AGG - chr7_2:10368196-10368215 None:intergenic 40.0%
AACACAACGACGTCAAAGAA+TGG + chr7_2:10368249-10368268 Msa1048640:CDS 40.0%
GTAAACACTTCCATATGCTC+CGG - chr7_2:10368370-10368389 None:intergenic 40.0%
TACAAGGCACAATTACCATG+TGG + chr7_2:10368387-10368406 Msa1048640:CDS 40.0%
GTTGCCTTAAAGAAGCTTCA+TGG + chr7_2:10368417-10368436 Msa1048640:CDS 40.0%
CTGAAACTCTCGTCAAAAGA+TGG - chr7_2:10368459-10368478 None:intergenic 40.0%
TAGAAGCCGTGGAATTCAAT+TGG + chr7_2:10368619-10368638 Msa1048640:intron 40.0%
!! GTTGTGAAAGGTGTTGCATT+TGG + chr7_2:10368657-10368676 Msa1048640:intron 40.0%
ATCTCTATGCACTATTGGAG+GGG - chr7_2:10368709-10368728 None:intergenic 40.0%
CATCTCTATGCACTATTGGA+GGG - chr7_2:10368710-10368729 None:intergenic 40.0%
ACATCTCTATGCACTATTGG+AGG - chr7_2:10368711-10368730 None:intergenic 40.0%
GTTCCAAAGTCAGAAACACT+AGG - chr7_2:10368771-10368790 None:intergenic 40.0%
ACTATTGGATACATAGCTCC+TGG + chr7_2:10368840-10368859 Msa1048640:CDS 40.0%
AAAGTGTATTCGGAGATGCA+AGG + chr7_2:10369146-10369165 Msa1048640:intron 40.0%
TGCAGAACTTGCCTATACTA+TGG + chr7_2:10369345-10369364 Msa1048640:intron 40.0%
AGTGGCACTTGAAACTTTGA+TGG + chr7_2:10369405-10369424 Msa1048640:CDS 40.0%
GTGGCACTTGAAACTTTGAT+GGG + chr7_2:10369406-10369425 Msa1048640:CDS 40.0%
GTGATGTCAATATATCCCCA+GGG - chr7_2:10369438-10369457 None:intergenic 40.0%
AGTGATGTCAATATATCCCC+AGG - chr7_2:10369439-10369458 None:intergenic 40.0%
CCATCGCATTATTTGGAAGT+GGG - chr7_2:10369516-10369535 None:intergenic 40.0%
ACCATCGCATTATTTGGAAG+TGG - chr7_2:10369517-10369536 None:intergenic 40.0%
ACTCTCGACCAACAATGAAT+TGG + chr7_2:10369596-10369615 Msa1048640:CDS 40.0%
CTCTCGACCAACAATGAATT+GGG + chr7_2:10369597-10369616 Msa1048640:CDS 40.0%
TGCGATACCCAATTCATTGT+TGG - chr7_2:10369607-10369626 None:intergenic 40.0%
GGACCCCCTCAAATAATTGT+AGG - chr7_2:10368004-10368023 None:intergenic 45.0%
GTATGATGAAGTAGAAGCCG+TGG + chr7_2:10368608-10368627 Msa1048640:intron 45.0%
TGTATTCGGAGATGCAAGGT+AGG + chr7_2:10369150-10369169 Msa1048640:intron 45.0%
TATTTGGAAGTGGGAGACGT+TGG - chr7_2:10369507-10369526 None:intergenic 45.0%
CCCACTTCCAAATAATGCGA+TGG + chr7_2:10369513-10369532 Msa1048640:CDS 45.0%
TCATTGTTGGTCGAGAGTGA+GGG - chr7_2:10369594-10369613 None:intergenic 45.0%
TTCATTGTTGGTCGAGAGTG+AGG - chr7_2:10369595-10369614 None:intergenic 45.0%
GGACCCCCTCAAATAATTGT+AGG - chr7_2:10368004-10368023 None:intergenic 45.0%
GTATGATGAAGTAGAAGCCG+TGG + chr7_2:10368608-10368627 Msa1048640:intron 45.0%
TGTATTCGGAGATGCAAGGT+AGG + chr7_2:10369150-10369169 Msa1048640:intron 45.0%
TATTTGGAAGTGGGAGACGT+TGG - chr7_2:10369507-10369526 None:intergenic 45.0%
CCCACTTCCAAATAATGCGA+TGG + chr7_2:10369513-10369532 Msa1048640:CDS 45.0%
TCATTGTTGGTCGAGAGTGA+GGG - chr7_2:10369594-10369613 None:intergenic 45.0%
TTCATTGTTGGTCGAGAGTG+AGG - chr7_2:10369595-10369614 None:intergenic 45.0%
TCTAATCGAACCATCGCTGC+TGG + chr7_2:10368816-10368835 Msa1048640:CDS 50.0%
ACCATCGCTGCTGGAACTAT+TGG + chr7_2:10368825-10368844 Msa1048640:CDS 50.0%
TCCAATAGTTCCAGCAGCGA+TGG - chr7_2:10368829-10368848 None:intergenic 50.0%
ACTTTGATGGGAAGACACCC+TGG + chr7_2:10369418-10369437 Msa1048640:CDS 50.0%
CTTTGATGGGAAGACACCCT+GGG + chr7_2:10369419-10369438 Msa1048640:CDS 50.0%
TTTGATGGGAAGACACCCTG+GGG + chr7_2:10369420-10369439 Msa1048640:CDS 50.0%
TCTAATCGAACCATCGCTGC+TGG + chr7_2:10368816-10368835 Msa1048640:CDS 50.0%
ACCATCGCTGCTGGAACTAT+TGG + chr7_2:10368825-10368844 Msa1048640:CDS 50.0%
TCCAATAGTTCCAGCAGCGA+TGG - chr7_2:10368829-10368848 None:intergenic 50.0%
ACTTTGATGGGAAGACACCC+TGG + chr7_2:10369418-10369437 Msa1048640:CDS 50.0%
CTTTGATGGGAAGACACCCT+GGG + chr7_2:10369419-10369438 Msa1048640:CDS 50.0%
TTTGATGGGAAGACACCCTG+GGG + chr7_2:10369420-10369439 Msa1048640:CDS 50.0%
TGCATTGGGACCGGAGCATA+TGG + chr7_2:10368357-10368376 Msa1048640:CDS 55.0%
TGCATTGGGACCGGAGCATA+TGG + chr7_2:10368357-10368376 Msa1048640:CDS 55.0%
TCTTGGTAGGCGGGCAAGGT+TGG - chr7_2:10368108-10368127 None:intergenic 60.0%
CCTTTCTTGGTAGGCGGGCA+AGG - chr7_2:10368112-10368131 None:intergenic 60.0%
CCTTGCCCGCCTACCAAGAA+AGG + chr7_2:10368109-10368128 Msa1048640:CDS 60.0%
TCTTGGTAGGCGGGCAAGGT+TGG - chr7_2:10368108-10368127 None:intergenic 60.0%
CCTTTCTTGGTAGGCGGGCA+AGG - chr7_2:10368112-10368131 None:intergenic 60.0%
CCTTGCCCGCCTACCAAGAA+AGG + chr7_2:10368109-10368128 Msa1048640:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 10367958 10369824 10367958 ID=Msa1048640;Name=Msa1048640
chr7_2 mRNA 10367958 10369824 10367958 ID=Msa1048640-mRNA-1;Parent=Msa1048640;Name=Msa1048640-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|0.25|0.2|1|0.25|0.4|5|89|271
chr7_2 exon 10367958 10368032 10367958 ID=Msa1048640-mRNA-1:exon:2747;Parent=Msa1048640-mRNA-1
chr7_2 exon 10368094 10368130 10368094 ID=Msa1048640-mRNA-1:exon:2748;Parent=Msa1048640-mRNA-1
chr7_2 exon 10368190 10368438 10368190 ID=Msa1048640-mRNA-1:exon:2749;Parent=Msa1048640-mRNA-1
chr7_2 exon 10368793 10368861 10368793 ID=Msa1048640-mRNA-1:exon:2750;Parent=Msa1048640-mRNA-1
chr7_2 exon 10369350 10369824 10369350 ID=Msa1048640-mRNA-1:exon:2751;Parent=Msa1048640-mRNA-1
chr7_2 CDS 10367958 10368032 10367958 ID=Msa1048640-mRNA-1:cds;Parent=Msa1048640-mRNA-1
chr7_2 CDS 10368094 10368130 10368094 ID=Msa1048640-mRNA-1:cds;Parent=Msa1048640-mRNA-1
chr7_2 CDS 10368190 10368438 10368190 ID=Msa1048640-mRNA-1:cds;Parent=Msa1048640-mRNA-1
chr7_2 CDS 10368793 10368861 10368793 ID=Msa1048640-mRNA-1:cds;Parent=Msa1048640-mRNA-1
chr7_2 CDS 10369350 10369735 10369350 ID=Msa1048640-mRNA-1:cds;Parent=Msa1048640-mRNA-1
chr7_2 three_prime_UTR 10369736 10369824 10369736 ID=Msa1048640-mRNA-1:three_prime_utr;Parent=Msa1048640-mRNA-1
Gene Sequence

>Msa1048640

ATGGTTCCCCAATCTCTCTGTAATGTCACTAATTTGGACATTTCCTACAATTATTTGAGGGGGTCCAATCCCATTAGGATTCAATTCCAACCTTGCCCGCCTACCAAGAAAGTCTCCTCATTCATCGTGTGCTTCAAACTTCGACATAATTTTGTTGAGAACAAGCATGCAAACACAACGACGTCAAAGAATGGAGATTTGTTTTGTATATGGAATTATGACGGAGAAATAGCATATGATGACATTATTAAAGCAACAGAAGACTTTGACATTAGATATTGCATTGGGACCGGAGCATATGGAAGTGTTTACAAGGCACAATTACCATGTGGAAAAATTGTTGCCTTAAAGAAGCTTCATGCTCGACTCCTTCAATATGATTCATCTAATCGAACCATCGCTGCTGGAACTATTGGATACATAGCTCCTGAACTTGCCTATACTATGGTTGTGAGTAAAAAGTGTGATGTATATAGCTTTGGAGTAGTGGCACTTGAAACTTTGATGGGAAGACACCCTGGGGATATATTGACATCACTTCAATTAGCATCAACTTCAGGCATGAAATTATGCGAAGTATTAGACCAACGTCTCCCACTTCCAAATAATGCGATGGTTTTACTTGACATAATTCATGTTGCCGTAGTAGCATTTGCATGCTTAAATATCAACCCTCACTCTCGACCAACAATGAATTGGGTATCGCAGAGTTTTGTCACCAAGCTTACACCATTACACATTTCTTTGAGTGAAATTTCAGTGCAGCAACTCATGAGTCAAGAACTCAAAGCATTATTGCATATTGTGAACCTCTGA
Protein sequence

>Msa1048640

MVPQSLCNVTNLDISYNYLRGSNPIRIQFQPCPPTKKVSSFIVCFKLRHNFVENKHANTTTSKNGDLFCIWNYDGEIAYDDIIKATEDFDIRYCIGTGAYGSVYKAQLPCGKIVALKKLHARLLQYDSSNRTIAAGTIGYIAPELAYTMVVSKKCDVYSFGVVALETLMGRHPGDILTSLQLASTSGMKLCEVLDQRLPLPNNAMVLLDIIHVAVVAFACLNINPHSRPTMNWVSQSFVTKLTPLHISLSEISVQQLMSQELKALLHIVNL*