AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1049000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1049000 MtrunA17_Chr7g0217711 80.000 155 6 1 1 130 12 166 3.26e-85 247
Msa1049000 MtrunA17_Chr7g0217721 78.125 160 4 2 1 129 12 171 4.25e-82 246
Msa1049000 MtrunA17_Chr4g0060931 61.972 142 28 2 2 118 11 151 8.73e-52 168
Msa1049000 MtrunA17_Chr6g0453451 62.121 132 25 1 3 109 15 146 1.23e-49 162
Msa1049000 MtrunA17_Chr3g0091921 59.859 142 31 2 2 118 10 150 7.42e-49 159
Msa1049000 MtrunA17_Chr3g0113031 82.353 85 9 1 46 130 3 81 8.19e-47 153
Msa1049000 MtrunA17_Chr2g0316971 64.567 127 18 2 11 110 26 152 1.33e-46 155
Msa1049000 MtrunA17_Chr6g0484441 60.484 124 24 1 11 109 8 131 6.30e-46 152
Msa1049000 MtrunA17_Chr6g0461661 55.944 143 35 3 3 118 13 154 1.76e-45 152
Msa1049000 MtrunA17_Chr3g0113001 76.404 89 15 1 47 135 29 111 2.27e-43 145
Msa1049000 MtrunA17_Chr7g0253011 53.425 146 38 4 2 118 11 155 2.21e-42 144
Msa1049000 MtrunA17_Chr3g0139331 54.478 134 34 2 11 117 14 147 3.55e-42 143
Msa1049000 MtrunA17_Chr1g0147421 54.815 135 33 3 11 117 30 164 1.70e-40 139
Msa1049000 MtrunA17_Chr3g0144271 55.556 135 32 3 11 117 26 160 9.00e-40 139
Msa1049000 MtrunA17_Chr4g0056541 51.163 129 35 1 11 111 10 138 1.56e-37 131
Msa1049000 MtrunA17_Chr4g0018391 50.388 129 36 1 11 111 10 138 4.94e-37 130
Msa1049000 MtrunA17_Chr5g0405211 49.612 129 37 1 11 111 11 139 3.65e-36 127
Msa1049000 MtrunA17_Chr8g0372121 49.606 127 36 1 11 109 9 135 7.17e-36 126
Msa1049000 MtrunA17_Chr5g0398971 50.000 130 36 2 11 111 10 139 9.73e-36 126
Msa1049000 MtrunA17_Chr4g0017921 52.756 127 32 1 11 109 11 137 9.80e-36 126
Msa1049000 MtrunA17_Chr2g0309331 51.538 130 34 2 11 111 13 142 1.54e-35 125
Msa1049000 MtrunA17_Chr8g0346001 47.222 144 48 1 3 118 10 153 2.32e-35 127
Msa1049000 MtrunA17_Chr8g0359921 46.043 139 49 2 5 118 11 148 1.42e-34 123
Msa1049000 MtrunA17_Chr2g0312321 49.242 132 38 3 5 110 8 136 3.61e-34 121
Msa1049000 MtrunA17_Chr7g0214071 48.092 131 44 2 2 108 9 139 7.21e-34 119
Msa1049000 MtrunA17_Chr5g0428991 48.438 128 39 1 7 107 24 151 9.43e-34 124
Msa1049000 MtrunA17_Chr3g0128151 50.400 125 35 1 10 107 24 148 1.65e-33 124
Msa1049000 MtrunA17_Chr6g0481091 46.565 131 43 1 6 109 4 134 2.03e-33 118
Msa1049000 MtrunA17_Chr3g0128111 50.000 128 36 2 8 107 41 168 2.35e-33 118
Msa1049000 MtrunA17_Chr2g0318081 43.609 133 50 1 5 112 13 145 1.43e-32 118
Msa1049000 MtrunA17_Chr1g0200561 47.200 125 38 1 11 107 22 146 1.71e-32 118
Msa1049000 MtrunA17_Chr2g0309891 46.667 135 41 2 11 114 9 143 6.35e-32 116
Msa1049000 MtrunA17_Chr4g0042561 47.368 133 43 2 11 116 12 144 1.34e-31 114
Msa1049000 MtrunA17_Chr5g0417791 47.619 126 41 1 11 111 6 131 2.40e-31 113
Msa1049000 MtrunA17_Chr5g0433781 45.038 131 45 1 6 109 4 134 4.32e-31 117
Msa1049000 MtrunA17_Chr8g0384721 41.558 154 58 4 6 132 5 153 5.36e-31 112
Msa1049000 MtrunA17_Chr3g0124761 42.636 129 48 2 5 108 4 131 1.30e-30 112
Msa1049000 MtrunA17_Chr3g0130731 44.186 129 46 2 5 108 4 131 1.73e-30 111
Msa1049000 MtrunA17_Chr3g0109821 44.275 131 46 1 6 109 4 134 2.18e-30 115
Msa1049000 MtrunA17_Chr2g0318101 42.963 135 50 2 4 111 11 145 2.58e-30 112
Msa1049000 MtrunA17_Chr7g0263931 42.143 140 54 2 5 117 8 147 6.90e-30 110
Msa1049000 MtrunA17_Chr1g0183741 42.857 126 45 2 11 109 13 138 1.03e-29 109
Msa1049000 MtrunA17_Chr4g0047841 43.284 134 45 3 11 117 18 147 1.38e-29 110
Msa1049000 MtrunA17_Chr4g0054791 42.963 135 47 2 4 108 2 136 1.29e-28 107
Msa1049000 MtrunA17_Chr1g0197361 44.361 133 46 2 11 115 11 143 1.88e-28 109
Msa1049000 MtrunA17_Chr7g0261411 42.857 126 45 2 11 109 13 138 2.35e-28 106
Msa1049000 MtrunA17_Chr5g0400461 43.939 132 40 2 11 108 9 140 2.62e-28 107
Msa1049000 MtrunA17_Chr7g0252971 40.690 145 52 2 1 111 1 145 3.28e-28 106
Msa1049000 MtrunA17_Chr3g0092671 44.361 133 46 2 11 115 8 140 4.12e-28 108
Msa1049000 MtrunA17_Chr8g0364791 41.007 139 55 1 7 118 5 143 8.14e-28 107
Msa1049000 MtrunA17_Chr8g0384201 40.458 131 51 1 11 114 9 139 9.31e-28 107
Msa1049000 MtrunA17_Chr3g0130101 40.741 135 53 1 11 118 10 144 1.22e-27 105
Msa1049000 MtrunA17_Chr1g0201021 41.538 130 49 1 11 113 22 151 2.19e-27 106
Msa1049000 MtrunA17_Chr2g0326361 42.969 128 46 2 8 108 14 141 2.62e-27 103
Msa1049000 MtrunA17_Chr1g0197351 46.341 123 39 1 11 106 45 167 2.68e-27 105
Msa1049000 MtrunA17_Chr2g0311661 35.294 187 86 3 1 152 9 195 6.80e-27 102
Msa1049000 MtrunA17_Chr2g0311651 39.855 138 53 2 11 118 25 162 9.50e-26 99.8
Msa1049000 MtrunA17_Chr3g0113011 86.000 50 7 0 1 50 12 61 1.36e-25 93.2
Msa1049000 MtrunA17_Chr3g0113041 88.000 50 6 0 1 50 12 61 3.95e-25 92.0
Msa1049000 MtrunA17_Chr8g0361731 40.945 127 48 2 11 110 17 143 4.21e-25 99.4
Msa1049000 MtrunA17_Chr5g0417001 42.400 125 45 2 11 108 17 141 8.18e-25 98.2
Msa1049000 MtrunA17_Chr6g0453131 41.935 124 46 2 11 108 18 141 8.43e-25 98.2
Msa1049000 MtrunA17_Chr8g0385991 35.714 168 80 4 1 141 7 173 8.54e-24 92.8
Msa1049000 MtrunA17_Chr8g0345691 44.531 128 40 4 10 107 14 140 1.66e-23 95.1
Msa1049000 MtrunA17_Chr4g0076731 41.935 124 46 2 11 108 57 180 1.68e-23 95.1
Msa1049000 MtrunA17_Chr8g0345671 46.457 127 37 5 10 106 13 138 9.44e-23 92.8
Msa1049000 MtrunA17_Chr4g0038751 43.077 130 46 4 11 112 18 147 1.33e-22 91.3
Msa1049000 MtrunA17_Chr2g0321741 56.667 60 26 0 47 106 57 116 1.80e-22 91.7
Msa1049000 MtrunA17_Chr2g0321631 35.404 161 69 5 11 139 7 164 3.01e-22 89.4
Msa1049000 MtrunA17_Chr5g0442771 37.143 140 60 2 11 122 21 160 9.61e-22 89.0
Msa1049000 MtrunA17_Chr4g0026141 33.898 177 83 4 8 153 5 178 4.26e-21 86.3
Msa1049000 MtrunA17_Chr7g0243371 42.045 88 41 2 34 111 7 94 2.79e-20 80.9
Msa1049000 MtrunA17_Chr3g0131911 37.037 135 58 2 1 108 7 141 9.11e-20 82.4
Msa1049000 MtrunA17_Chr4g0050701 38.462 117 53 3 11 108 14 130 1.41e-19 80.9
Msa1049000 MtrunA17_Chr7g0266701 35.659 129 51 3 11 107 7 135 7.36e-18 77.8
Msa1049000 MtrunA17_Chr8g0345711 40.157 127 45 4 10 106 14 139 1.22e-17 75.5
Msa1049000 MtrunA17_Chr8g0345721 31.410 156 47 5 10 106 37 191 1.72e-13 65.5
Msa1049000 MtrunA17_Chr8g0345741 43.373 83 40 4 27 107 42 119 7.09e-12 60.1
Msa1049000 MtrunA17_Chr8g0384351 35.000 120 53 4 6 108 8 119 4.31e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1049000 AT5G61430.1 61.268 142 29 2 2 118 10 150 1.41e-51 167
Msa1049000 AT5G07680.1 59.155 142 32 2 2 118 11 151 1.06e-49 162
Msa1049000 AT5G07680.2 62.406 133 24 2 11 118 6 137 9.82e-49 159
Msa1049000 AT3G29035.1 60.448 134 28 1 2 110 18 151 1.13e-48 159
Msa1049000 AT5G39610.1 58.955 134 30 1 2 110 14 147 1.18e-46 153
Msa1049000 AT3G18400.1 59.200 125 26 1 11 110 8 132 1.04e-44 149
Msa1049000 AT5G53950.1 61.417 127 22 2 11 110 20 146 1.75e-44 150
Msa1049000 AT5G18270.2 57.143 133 31 2 4 110 17 149 7.84e-44 147
Msa1049000 AT5G18270.1 57.143 133 31 2 4 110 17 149 8.92e-44 147
Msa1049000 AT3G04060.1 54.545 143 38 3 2 118 14 155 1.89e-43 147
Msa1049000 AT3G15170.1 52.761 163 44 5 11 146 23 179 2.01e-43 145
Msa1049000 AT2G24430.2 55.147 136 34 2 4 112 12 147 1.24e-42 144
Msa1049000 AT2G24430.1 55.147 136 34 2 4 112 12 147 1.24e-42 144
Msa1049000 AT1G76420.1 53.383 133 35 2 11 116 25 157 1.64e-39 136
Msa1049000 AT4G10350.1 45.238 168 58 2 11 150 12 173 1.60e-37 131
Msa1049000 AT1G62700.1 52.756 127 32 1 11 109 10 136 3.67e-37 131
Msa1049000 AT1G62700.2 52.756 127 32 1 11 109 10 136 3.67e-37 131
Msa1049000 AT1G12260.2 51.163 129 35 1 11 111 10 138 1.26e-36 129
Msa1049000 AT5G61430.2 79.452 73 14 1 46 118 16 87 1.26e-36 127
Msa1049000 AT1G12260.1 51.163 129 35 1 11 111 10 138 2.23e-36 129
Msa1049000 AT2G46770.1 46.528 144 49 1 3 118 11 154 8.49e-36 127
Msa1049000 AT2G18060.3 44.586 157 51 3 4 132 5 153 1.63e-35 126
Msa1049000 AT2G18060.1 44.586 157 51 3 4 132 5 153 1.63e-35 126
Msa1049000 AT4G36160.2 46.000 150 45 3 11 132 17 158 1.71e-35 127
Msa1049000 AT4G36160.1 46.000 150 45 3 11 132 13 154 1.72e-35 127
Msa1049000 AT4G36160.3 46.000 150 45 3 11 132 13 154 1.72e-35 127
Msa1049000 AT1G71930.2 45.455 132 44 1 11 114 12 143 1.11e-34 123
Msa1049000 AT1G71930.1 45.455 132 44 1 11 114 12 143 1.11e-34 123
Msa1049000 AT5G62380.2 48.819 127 37 1 11 109 10 136 1.50e-34 124
Msa1049000 AT5G62380.1 48.819 127 37 1 11 109 10 136 1.50e-34 124
Msa1049000 AT1G33280.1 49.606 127 36 1 11 109 11 137 3.33e-34 122
Msa1049000 AT3G61910.1 45.324 139 48 1 3 113 6 144 4.11e-34 122
Msa1049000 AT5G66300.1 44.667 150 48 3 11 132 15 157 4.91e-34 121
Msa1049000 AT1G32770.1 47.143 140 46 1 3 114 11 150 5.25e-34 122
Msa1049000 AT1G33060.1 47.328 131 42 1 10 113 26 156 1.14e-33 125
Msa1049000 AT1G33060.2 47.328 131 42 1 10 113 26 156 1.20e-33 125
Msa1049000 AT4G35580.1 47.407 135 39 4 10 112 11 145 1.75e-33 123
Msa1049000 AT1G56010.2 43.919 148 52 4 5 126 16 158 1.83e-33 120
Msa1049000 AT4G35580.3 47.407 135 39 4 10 112 11 145 2.02e-33 123
Msa1049000 AT4G35580.2 47.407 135 39 4 10 112 11 145 2.08e-33 123
Msa1049000 AT3G12977.1 44.531 128 46 1 11 113 21 148 3.76e-33 118
Msa1049000 AT5G04410.1 47.727 132 42 1 11 115 12 143 1.91e-32 121
Msa1049000 AT2G33480.2 47.200 125 44 1 6 108 13 137 2.02e-32 116
Msa1049000 AT2G33480.1 44.928 138 51 2 6 118 13 150 2.16e-32 116
Msa1049000 AT5G13180.1 43.939 132 50 2 1 108 7 138 2.17e-32 116
Msa1049000 AT3G10500.1 46.970 132 43 1 11 115 12 143 2.67e-32 120
Msa1049000 AT3G17730.1 45.038 131 45 1 6 109 4 134 3.48e-32 115
Msa1049000 AT3G10490.1 50.400 125 35 1 11 108 30 154 3.61e-32 115
Msa1049000 AT3G15500.1 43.411 129 48 1 5 108 11 139 5.17e-32 116
Msa1049000 AT3G10480.2 50.400 125 35 1 11 108 30 154 6.98e-32 118
Msa1049000 AT3G10480.1 50.400 125 35 1 11 108 30 154 7.35e-32 118
Msa1049000 AT1G52890.1 44.186 129 47 1 5 108 11 139 8.23e-32 116
Msa1049000 AT3G49530.2 44.853 136 47 2 10 117 15 150 1.47e-31 117
Msa1049000 AT1G79580.3 49.219 128 36 2 11 109 20 147 1.55e-31 116
Msa1049000 AT1G79580.5 49.219 128 36 2 11 109 20 147 1.55e-31 116
Msa1049000 AT1G79580.4 49.219 128 36 2 11 109 20 147 1.55e-31 116
Msa1049000 AT1G79580.2 49.219 128 36 2 11 109 20 147 1.55e-31 116
Msa1049000 AT1G79580.1 49.219 128 36 2 11 109 20 147 1.55e-31 116
Msa1049000 AT3G10490.2 50.400 125 35 1 11 108 30 154 1.71e-31 117
Msa1049000 AT3G49530.1 44.853 136 47 2 10 117 15 150 2.36e-31 117
Msa1049000 AT4G27410.2 42.636 129 49 1 5 108 11 139 2.50e-31 114
Msa1049000 AT1G01720.1 43.511 131 48 2 3 108 2 131 2.52e-31 114
Msa1049000 AT5G08790.1 44.961 129 45 2 5 108 4 131 3.13e-31 114
Msa1049000 AT1G65910.1 44.275 131 46 1 6 109 4 134 3.88e-31 117
Msa1049000 AT5G46590.2 46.617 133 43 2 11 115 9 141 4.65e-31 113
Msa1049000 AT1G61110.1 45.385 130 45 2 11 114 19 148 5.42e-31 114
Msa1049000 AT5G46590.1 46.617 133 43 2 11 115 9 141 5.45e-31 113
Msa1049000 AT2G27300.1 44.444 126 44 1 11 110 17 142 5.71e-31 114
Msa1049000 AT1G77450.1 43.750 128 46 2 6 108 8 134 2.70e-30 110
Msa1049000 AT3G03200.1 45.802 131 44 1 6 109 4 134 9.27e-30 113
Msa1049000 AT5G17260.1 45.038 131 45 1 6 109 4 134 1.21e-29 112
Msa1049000 AT5G63790.1 43.411 129 47 2 5 108 47 174 2.16e-29 109
Msa1049000 AT5G24590.2 45.238 126 41 2 10 107 15 140 2.23e-29 111
Msa1049000 AT5G63790.2 43.411 129 47 2 5 108 57 184 2.71e-29 109
Msa1049000 AT5G09330.5 39.007 141 59 1 5 118 3 143 4.10e-29 111
Msa1049000 AT5G09330.2 39.007 141 59 1 5 118 3 143 4.10e-29 111
Msa1049000 AT5G09330.4 39.007 141 59 1 5 118 3 143 4.10e-29 111
Msa1049000 AT5G09330.3 39.007 141 59 1 5 118 3 143 4.10e-29 111
Msa1049000 AT5G09330.1 39.007 141 59 1 5 118 3 143 4.10e-29 111
Msa1049000 AT1G54330.1 48.800 125 37 1 11 108 9 133 6.21e-29 108
Msa1049000 AT1G69490.1 46.341 123 41 1 11 108 12 134 6.39e-29 107
Msa1049000 AT4G10350.2 52.381 105 44 1 46 150 28 126 6.74e-29 107
Msa1049000 AT3G04070.2 43.357 143 50 3 2 114 4 145 1.31e-28 108
Msa1049000 AT4G27410.3 37.671 146 49 1 5 108 11 156 1.38e-28 107
Msa1049000 AT3G04070.1 46.269 134 41 3 11 114 13 145 2.20e-28 107
Msa1049000 AT3G15510.1 44.355 124 42 2 12 108 21 144 2.87e-28 107
Msa1049000 AT5G22290.1 41.085 129 50 1 11 113 24 152 4.16e-28 106
Msa1049000 AT4G17980.1 45.669 127 40 2 11 108 9 135 5.80e-28 104
Msa1049000 AT4G17980.2 45.669 127 40 2 11 108 9 135 1.53e-27 104
Msa1049000 AT5G64060.1 37.589 141 61 1 5 118 3 143 1.70e-27 105
Msa1049000 AT1G56010.1 60.494 81 27 2 46 126 16 91 3.16e-27 102
Msa1049000 AT3G44290.2 41.860 129 49 1 11 113 17 145 3.55e-27 102
Msa1049000 AT5G39820.1 41.429 140 55 2 11 123 23 162 4.24e-27 103
Msa1049000 AT3G12977.2 63.235 68 25 0 46 113 28 95 1.14e-26 100
Msa1049000 AT1G34180.3 41.667 132 50 1 11 115 19 150 2.62e-26 103
Msa1049000 AT3G44290.1 41.860 129 49 1 11 113 17 145 2.69e-26 102
Msa1049000 AT1G34180.1 41.667 132 50 1 11 115 19 150 3.59e-26 103
Msa1049000 AT1G34190.1 40.909 132 51 1 11 115 19 150 5.60e-26 103
Msa1049000 AT1G26870.1 42.742 124 44 2 11 107 19 142 1.01e-25 101
Msa1049000 AT4G28530.1 38.356 146 47 3 7 109 9 154 8.44e-25 98.2
Msa1049000 AT3G10480.3 68.750 64 20 0 45 108 124 187 1.26e-24 99.0
Msa1049000 AT1G34180.4 38.194 144 50 1 11 115 19 162 1.38e-24 98.6
Msa1049000 AT2G02450.1 40.909 132 52 2 11 116 54 185 1.48e-24 97.8
Msa1049000 AT1G34180.2 38.194 144 50 1 11 115 19 162 1.60e-24 99.0
Msa1049000 AT2G02450.2 40.909 132 52 2 11 116 54 185 1.99e-24 97.8
Msa1049000 AT1G32510.1 41.549 142 49 4 11 118 9 150 2.65e-24 95.9
Msa1049000 AT2G43000.1 37.795 127 54 1 11 112 21 147 5.84e-24 94.7
Msa1049000 AT1G52880.1 42.636 129 45 2 12 111 21 149 6.66e-24 95.1
Msa1049000 AT2G33480.3 63.934 61 22 0 48 108 20 80 1.83e-23 92.0
Msa1049000 AT1G32870.1 43.077 130 49 1 11 115 13 142 7.80e-23 94.0
Msa1049000 AT1G32870.2 43.077 130 49 1 11 115 13 142 8.50e-23 94.0
Msa1049000 AT1G32870.3 43.077 130 49 1 11 115 49 178 8.66e-23 94.0
Msa1049000 AT3G12910.1 40.945 127 46 3 11 108 24 150 1.31e-22 91.7
Msa1049000 AT3G10490.4 73.585 53 14 0 56 108 2 54 1.37e-21 89.4
Msa1049000 AT3G10490.3 73.585 53 14 0 56 108 2 54 1.37e-21 89.4
Msa1049000 AT2G18060.2 56.944 72 23 2 61 132 2 65 1.34e-20 85.9
Msa1049000 AT2G17040.1 40.299 134 51 4 11 115 9 142 1.12e-19 83.2
Msa1049000 AT4G01550.1 39.552 134 50 5 6 108 2 135 2.16e-19 84.0
Msa1049000 AT5G04395.1 37.324 142 48 2 11 111 31 172 2.58e-19 80.5
Msa1049000 AT5G22290.2 59.615 52 21 0 62 113 2 53 9.27e-19 80.1
Msa1049000 AT5G22380.1 34.884 129 52 3 10 106 7 135 1.94e-18 79.3
Msa1049000 AT3G44350.1 34.228 149 62 5 7 119 4 152 3.13e-18 77.0
Msa1049000 AT3G44350.2 34.000 150 66 5 7 123 4 153 1.50e-17 77.0
Msa1049000 AT2G43000.2 46.970 66 35 0 47 112 4 69 2.43e-17 75.5
Msa1049000 AT4G01540.1 33.333 147 58 5 10 124 6 144 4.35e-16 74.7
Msa1049000 AT4G01540.3 33.333 147 58 5 10 124 6 144 4.97e-16 74.3
Msa1049000 AT4G01540.2 33.333 147 58 5 10 124 6 144 5.35e-16 74.3
Msa1049000 AT4G01540.4 35.115 131 53 4 10 108 6 136 6.57e-16 73.9
Msa1049000 AT4G01520.1 31.788 151 63 6 6 124 2 144 1.60e-15 72.4
Msa1049000 AT3G04420.2 34.615 130 48 2 10 106 5 130 1.91e-15 72.0
Msa1049000 AT3G04420.1 34.615 130 48 2 10 106 5 130 2.49e-15 72.0
Msa1049000 AT1G01010.1 32.680 153 56 6 10 125 5 147 2.34e-14 69.7
Msa1049000 AT1G02220.1 32.540 126 53 3 10 106 5 127 1.54e-12 64.3
Msa1049000 AT1G02230.1 34.266 143 52 7 10 120 5 137 7.26e-12 62.4
Msa1049000 AT3G56530.1 28.148 135 69 2 5 111 49 183 8.37e-12 62.0
Msa1049000 AT5G50820.1 29.787 141 78 4 1 120 10 150 8.70e-12 60.8

Find 35 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAAGGGAAATTCATTAAT+TGG 0.105364 7_2:+11688879 Msa1049000:CDS
CCGCCTCTAAACCTGATAAA+AGG 0.209902 7_2:-11690865 None:intergenic
ACAAGGGAAATTCATTAATT+GGG 0.364746 7_2:+11688880 Msa1049000:CDS
ATCGGTTGTGCTCAGGAAAA+AGG 0.384221 7_2:-11689010 None:intergenic
GAGCTACTAATGCTGGCTAT+TGG 0.387868 7_2:+11688829 Msa1049000:CDS
GCCAGCATTAGTAGCTCTAT+TGG 0.388516 7_2:-11688823 None:intergenic
TATTGGTCCTTTGACCAGTT+GGG 0.417126 7_2:-11688806 None:intergenic
CTATTGGTCCTTTGACCAGT+TGG 0.441493 7_2:-11688807 None:intergenic
GAAAAGGTCAAATTTGATGT+TGG 0.443336 7_2:+11687926 Msa1049000:CDS
AACGATCACGTGCGCGTGAA+AGG 0.448186 7_2:+11690897 Msa1049000:CDS
CGCCTCTAAACCTGATAAAA+GGG 0.458135 7_2:-11690864 None:intergenic
AAATCAATACCTTGTCAAGA+AGG 0.466786 7_2:+11687982 Msa1049000:CDS
GCTGGCTATTGGAAAGCAAC+AGG 0.467708 7_2:+11688840 Msa1049000:CDS
ACGATCACGTGCGCGTGAAA+GGG 0.490449 7_2:+11690898 Msa1049000:CDS
ACCAATAGAGCTACTAATGC+TGG 0.495849 7_2:+11688822 Msa1049000:CDS
TTGATTTATAAGCTCTTCAT+CGG 0.497039 7_2:-11687966 None:intergenic
TTTATCAGGTTTAGAGGCGG+TGG 0.534983 7_2:+11690868 Msa1049000:CDS
TTTATAAGCTCTTCATCGGT+CGG 0.536559 7_2:-11687962 None:intergenic
AGGGACAGAAAATACCCAAC+TGG 0.538414 7_2:+11688792 Msa1049000:intron
CAACCGATCCACACATGGAA+TGG 0.549333 7_2:+11689025 Msa1049000:CDS
TGTGTGGATCGGTTGTGCTC+AGG 0.549723 7_2:-11689017 None:intergenic
TTACCATTCCATGTGTGGAT+CGG 0.563735 7_2:-11689028 None:intergenic
GTATTCATGCATGACCCAGT+TGG 0.566311 7_2:-11688955 None:intergenic
CAAAGACAAAGAGATTTACA+AGG 0.568333 7_2:+11688863 Msa1049000:CDS
CAATATTACCATTCCATGTG+TGG 0.569497 7_2:-11689033 None:intergenic
ACGTGCGCGTGAAAGGGGCG+TGG 0.581144 7_2:+11690904 Msa1049000:CDS
AGAGTGAGTTACCCTCCAAT+CGG 0.585613 7_2:-11688977 None:intergenic
GGTCATGCATGAATACCGAT+TGG 0.588791 7_2:+11688962 Msa1049000:CDS
CATGCATGAATACCGATTGG+AGG 0.592763 7_2:+11688965 Msa1049000:CDS
GAAAATACCCAACTGGTCAA+AGG 0.598845 7_2:+11688799 Msa1049000:intron
ATGCATGAATACCGATTGGA+GGG 0.621001 7_2:+11688966 Msa1049000:CDS
GAGCACAACCGATCCACACA+TGG 0.630980 7_2:+11689020 Msa1049000:CDS
TGTCATCAACCTTCTTGACA+AGG 0.634308 7_2:-11687991 None:intergenic
AAAGACAAAGAGATTTACAA+GGG 0.662925 7_2:+11688864 Msa1049000:CDS
TACATAGGAAGAGCTCCAAG+AGG 0.736988 7_2:+11688924 Msa1049000:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATTGATTTTTTGATAA+AGG - chr7_2:11689354-11689373 None:intergenic 10.0%
!!! GTGAATTTAATGTTTTTTAT+AGG + chr7_2:11688080-11688099 Msa1049000:intron 15.0%
!! AAAAAGAAAGAAAAACAATT+TGG + chr7_2:11688403-11688422 Msa1049000:intron 15.0%
!!! AATTATGCTTTCTTATTTTT+TGG + chr7_2:11688716-11688735 Msa1049000:intron 15.0%
!!! AAAAAATCTTTTCAAAATCA+CGG - chr7_2:11689172-11689191 None:intergenic 15.0%
!!! AGTTTACTTTATTTAGAAAA+AGG - chr7_2:11689300-11689319 None:intergenic 15.0%
!!! TGGGATTTTAATAAATTATT+AGG + chr7_2:11690826-11690845 Msa1049000:intron 15.0%
!! TAAAAAACATTAAATTCACC+TGG - chr7_2:11688079-11688098 None:intergenic 20.0%
!! ACTATACAAAATCAATGATA+TGG + chr7_2:11688205-11688224 Msa1049000:intron 20.0%
!!! AAAATTTGCTCAAATTACAA+GGG + chr7_2:11688272-11688291 Msa1049000:intron 20.0%
!!! ATAAATTTTAGAGAAACTAC+TGG + chr7_2:11689378-11689397 Msa1049000:intron 20.0%
!! AGGTTACACATAATATTAAA+TGG - chr7_2:11689523-11689542 None:intergenic 20.0%
!!! TTTGATTTGCAAAATATTGT+TGG + chr7_2:11690414-11690433 Msa1049000:intron 20.0%
!!! TTCTATTGAGTTAAATTTTG+TGG + chr7_2:11690594-11690613 Msa1049000:intron 20.0%
!!! AGAAATTTGGTTTATAATCT+TGG - chr7_2:11690636-11690655 None:intergenic 20.0%
!! ACTTGATTAATGAATAACAA+AGG + chr7_2:11690752-11690771 Msa1049000:intron 20.0%
! TTGATTTATAAGCTCTTCAT+CGG - chr7_2:11687969-11687988 None:intergenic 25.0%
! ATATGAATAAGTTTGAACCA+TGG + chr7_2:11688047-11688066 Msa1049000:intron 25.0%
! TATGAATAAGTTTGAACCAT+GGG + chr7_2:11688048-11688067 Msa1049000:intron 25.0%
! AAAATGGTCTATATTATAGG+GGG - chr7_2:11688154-11688173 None:intergenic 25.0%
! GAAAATGGTCTATATTATAG+GGG - chr7_2:11688155-11688174 None:intergenic 25.0%
! CGAAAATGGTCTATATTATA+GGG - chr7_2:11688156-11688175 None:intergenic 25.0%
!! CCTATAATATAGACCATTTT+CGG + chr7_2:11688154-11688173 Msa1049000:intron 25.0%
!! CTATAATATAGACCATTTTC+GGG + chr7_2:11688155-11688174 Msa1049000:intron 25.0%
!! CTTGTAATTTGAGCAAATTT+TGG - chr7_2:11688273-11688292 None:intergenic 25.0%
!! CAAAATTTGCTCAAATTACA+AGG + chr7_2:11688271-11688290 Msa1049000:intron 25.0%
!! AAATTTGCTCAAATTACAAG+GGG + chr7_2:11688273-11688292 Msa1049000:intron 25.0%
! TCATAAAAACATACCAAAGA+AGG + chr7_2:11688347-11688366 Msa1049000:intron 25.0%
!!! GTTTAGGTTTAATTTTGTTC+CGG - chr7_2:11688439-11688458 None:intergenic 25.0%
! AAGAAACGAGAATATATCTA+AGG - chr7_2:11688504-11688523 None:intergenic 25.0%
!!! TTTTTTGGTTTATTCAGTGA+TGG + chr7_2:11688731-11688750 Msa1049000:intron 25.0%
! AAAGACAAAGAGATTTACAA+GGG + chr7_2:11688864-11688883 Msa1049000:CDS 25.0%
! TACAAGGGAAATTCATTAAT+TGG + chr7_2:11688879-11688898 Msa1049000:CDS 25.0%
! ACAAGGGAAATTCATTAATT+GGG + chr7_2:11688880-11688899 Msa1049000:CDS 25.0%
! ATGATTTCTACTTTGACTAT+AGG + chr7_2:11689086-11689105 Msa1049000:intron 25.0%
! ACGTAATTATATCAAACACA+TGG - chr7_2:11689142-11689161 None:intergenic 25.0%
! AACAGATCTTAGTAATTGTT+TGG - chr7_2:11689251-11689270 None:intergenic 25.0%
! GATAAAGGTTACATTTATCA+TGG - chr7_2:11689339-11689358 None:intergenic 25.0%
!!! GTTTGATTTTCACTATTGTA+TGG - chr7_2:11689699-11689718 None:intergenic 25.0%
! ATTAGAGAAATCAGAAATAG+TGG - chr7_2:11689721-11689740 None:intergenic 25.0%
!!! AATATCCATTTGTTTTGAAG+AGG - chr7_2:11689844-11689863 None:intergenic 25.0%
! TTACAAACAAAATTGCATGT+TGG + chr7_2:11690095-11690114 Msa1049000:intron 25.0%
!! TACATGTCCTTTTATCTATT+TGG + chr7_2:11690127-11690146 Msa1049000:intron 25.0%
! ATACAACACACATGATAAAA+CGG - chr7_2:11690188-11690207 None:intergenic 25.0%
! AAAGTAACTATCAATCTTGT+CGG - chr7_2:11690328-11690347 None:intergenic 25.0%
!! GATTTCTGTTAGATTTGTTT+AGG + chr7_2:11690463-11690482 Msa1049000:intron 25.0%
!!! CTTATTTTGCTATTTTTCGT+TGG - chr7_2:11690513-11690532 None:intergenic 25.0%
! TATAATCTTGGCATAAGTTA+AGG - chr7_2:11690624-11690643 None:intergenic 25.0%
! TACATTATACTTCTTCTTCA+AGG - chr7_2:11690733-11690752 None:intergenic 25.0%
! TAATAACTTCAATCAAACTG+TGG + chr7_2:11690806-11690825 Msa1049000:intron 25.0%
! AATAACTTCAATCAAACTGT+GGG + chr7_2:11690807-11690826 Msa1049000:intron 25.0%
GAAAAGGTCAAATTTGATGT+TGG + chr7_2:11687926-11687945 Msa1049000:CDS 30.0%
AAATCAATACCTTGTCAAGA+AGG + chr7_2:11687982-11688001 Msa1049000:CDS 30.0%
CCGAAAATGGTCTATATTAT+AGG - chr7_2:11688157-11688176 None:intergenic 30.0%
TACAAAATCAATGATATGGC+AGG + chr7_2:11688209-11688228 Msa1049000:intron 30.0%
ACAAAATCAATGATATGGCA+GGG + chr7_2:11688210-11688229 Msa1049000:intron 30.0%
! AATTTGCTCAAATTACAAGG+GGG + chr7_2:11688274-11688293 Msa1049000:intron 30.0%
CACATAATTTAAGCCTTCTT+TGG - chr7_2:11688363-11688382 None:intergenic 30.0%
CAAAGAAGGCTTAAATTATG+TGG + chr7_2:11688361-11688380 Msa1049000:intron 30.0%
GAAAGAAAAACAATTTGGAG+TGG + chr7_2:11688408-11688427 Msa1049000:intron 30.0%
! CTTTTCTCCTTACAAATGAA+GGG - chr7_2:11688464-11688483 None:intergenic 30.0%
! TCTTTTCTCCTTACAAATGA+AGG - chr7_2:11688465-11688484 None:intergenic 30.0%
ATTCTCGTTTCTTACTTTGA+TGG + chr7_2:11688511-11688530 Msa1049000:intron 30.0%
TTATTCAGTGATGGCTAAAA+TGG + chr7_2:11688740-11688759 Msa1049000:intron 30.0%
TATTCAGTGATGGCTAAAAT+GGG + chr7_2:11688741-11688760 Msa1049000:intron 30.0%
!!! AATGGTATTTTTTCTGTGTG+AGG + chr7_2:11688772-11688791 Msa1049000:intron 30.0%
!!! ATGGTATTTTTTCTGTGTGA+GGG + chr7_2:11688773-11688792 Msa1049000:intron 30.0%
CAAAGACAAAGAGATTTACA+AGG + chr7_2:11688863-11688882 Msa1049000:CDS 30.0%
AATTGGGATGAAAAAAACAC+TGG + chr7_2:11688896-11688915 Msa1049000:CDS 30.0%
!!! AAAACACTGGTTTTCTACAT+AGG + chr7_2:11688909-11688928 Msa1049000:CDS 30.0%
!!! AACCTTTTTTGTAGAGTGAA+TGG + chr7_2:11689538-11689557 Msa1049000:intron 30.0%
!!! ACCTTTTTTGTAGAGTGAAT+GGG + chr7_2:11689539-11689558 Msa1049000:intron 30.0%
AATTGTGGAAAGAAAATGGA+TGG + chr7_2:11689588-11689607 Msa1049000:intron 30.0%
ATTGTGGAAAGAAAATGGAT+GGG + chr7_2:11689589-11689608 Msa1049000:intron 30.0%
AGAGATGCAATAGTATTTGA+TGG - chr7_2:11689651-11689670 None:intergenic 30.0%
TATGGAGAATAATCCAACAA+TGG - chr7_2:11689681-11689700 None:intergenic 30.0%
!! TTTCTCTGTTTGATTTGGAT+TGG - chr7_2:11689760-11689779 None:intergenic 30.0%
! TTTGGTTTCTCTGTTTGATT+TGG - chr7_2:11689765-11689784 None:intergenic 30.0%
TTCATCCTCTTCAAAACAAA+TGG + chr7_2:11689836-11689855 Msa1049000:intron 30.0%
TCTACCAAAAGAAAACTCTT+GGG - chr7_2:11689943-11689962 None:intergenic 30.0%
ATGGAAATGACATGTTTCAA+AGG + chr7_2:11690000-11690019 Msa1049000:intron 30.0%
GAAATTCCAAAAGCTATCAT+TGG - chr7_2:11690072-11690091 None:intergenic 30.0%
GAGACTACCAAATAGATAAA+AGG - chr7_2:11690137-11690156 None:intergenic 30.0%
! TATCTATTTGGTAGTCTCAA+CGG + chr7_2:11690139-11690158 Msa1049000:intron 30.0%
CTCACTTTGCTAAAGAAATT+TGG - chr7_2:11690649-11690668 None:intergenic 30.0%
CAAATTTCTTTAGCAAAGTG+AGG + chr7_2:11690647-11690666 Msa1049000:intron 30.0%
TAATGAATAACAAAGGACAC+CGG + chr7_2:11690759-11690778 Msa1049000:intron 30.0%
TGATTGAAGTTATTACAAGC+CGG - chr7_2:11690801-11690820 None:intergenic 30.0%
TTTATAAGCTCTTCATCGGT+CGG - chr7_2:11687965-11687984 None:intergenic 35.0%
!!! GGTATTTTGAAACCCGAAAA+TGG - chr7_2:11688170-11688189 None:intergenic 35.0%
TTGTATAGTCAGATGACCTA+GGG - chr7_2:11688194-11688213 None:intergenic 35.0%
TTTGTATAGTCAGATGACCT+AGG - chr7_2:11688195-11688214 None:intergenic 35.0%
CAAAATCAATGATATGGCAG+GGG + chr7_2:11688211-11688230 Msa1049000:intron 35.0%
AAAATCAATGATATGGCAGG+GGG + chr7_2:11688212-11688231 Msa1049000:intron 35.0%
CAGGTACTTTGAGCAAATTT+CGG - chr7_2:11688242-11688261 None:intergenic 35.0%
! GAAATTTGCTCAAAGTACCT+GGG + chr7_2:11688241-11688260 Msa1049000:intron 35.0%
! AAATTTGCTCAAAGTACCTG+GGG + chr7_2:11688242-11688261 Msa1049000:intron 35.0%
TTACAAATGAAGGGTGGTTT+AGG - chr7_2:11688455-11688474 None:intergenic 35.0%
TAAACCACCCTTCATTTGTA+AGG + chr7_2:11688454-11688473 Msa1049000:intron 35.0%
TTTGTAAGGAGAAAAGAGAG+TGG + chr7_2:11688468-11688487 Msa1049000:intron 35.0%
AACACATTATGATGTGTCAG+TGG - chr7_2:11688565-11688584 None:intergenic 35.0%
CTGACACATCATAATGTGTT+AGG + chr7_2:11688565-11688584 Msa1049000:intron 35.0%
CTAAAATGGGAGAAACAGAA+TGG + chr7_2:11688754-11688773 Msa1049000:intron 35.0%
AAGAGGTGAAAAATCCAACT+GGG + chr7_2:11688941-11688960 Msa1049000:CDS 35.0%
CAATATTACCATTCCATGTG+TGG - chr7_2:11689036-11689055 None:intergenic 35.0%
ACCCATTCACTCTACAAAAA+AGG - chr7_2:11689543-11689562 None:intergenic 35.0%
GCGTAATTGTGGAAAGAAAA+TGG + chr7_2:11689584-11689603 Msa1049000:intron 35.0%
AAAATGGATGGGTCAAAACT+TGG + chr7_2:11689600-11689619 Msa1049000:intron 35.0%
ATCTCTATTGTCTCCATTGT+TGG + chr7_2:11689665-11689684 Msa1049000:intron 35.0%
! CAATTGTTGCTTCAGCTAAA+GGG - chr7_2:11689869-11689888 None:intergenic 35.0%
! TTCTCCCAAGAGTTTTCTTT+TGG + chr7_2:11689936-11689955 Msa1049000:intron 35.0%
CTCTACCAAAAGAAAACTCT+TGG - chr7_2:11689944-11689963 None:intergenic 35.0%
GATATCTCATCTGTGGTATA+TGG + chr7_2:11689981-11690000 Msa1049000:intron 35.0%
GAAATGACATGTTTCAAAGG+TGG + chr7_2:11690003-11690022 Msa1049000:intron 35.0%
! TTGCATCCAATGATAGCTTT+TGG + chr7_2:11690063-11690082 Msa1049000:intron 35.0%
AGTTATTACAAGCCGGAAAA+AGG - chr7_2:11690794-11690813 None:intergenic 35.0%
! TGTATGATGTCCCTTTTATC+AGG + chr7_2:11690854-11690873 Msa1049000:CDS 35.0%
TGTCATCAACCTTCTTGACA+AGG - chr7_2:11687994-11688013 None:intergenic 40.0%
TTTGAACCATGGGATTTACC+AGG + chr7_2:11688058-11688077 Msa1049000:intron 40.0%
AATTCACCTGGTAAATCCCA+TGG - chr7_2:11688067-11688086 None:intergenic 40.0%
TGTATAGTCAGATGACCTAG+GGG - chr7_2:11688193-11688212 None:intergenic 40.0%
! CGAAATTTGCTCAAAGTACC+TGG + chr7_2:11688240-11688259 Msa1049000:intron 40.0%
! AATTTGCTCAAAGTACCTGG+GGG + chr7_2:11688243-11688262 Msa1049000:intron 40.0%
! ACAATTTGGAGTGGTGATTC+CGG + chr7_2:11688417-11688436 Msa1049000:intron 40.0%
TTCTCCTTACAAATGAAGGG+TGG - chr7_2:11688461-11688480 None:intergenic 40.0%
CACGTCTATTAGTGTCATGT+TGG - chr7_2:11688599-11688618 None:intergenic 40.0%
CAACATGACACTAATAGACG+TGG + chr7_2:11688597-11688616 Msa1049000:intron 40.0%
GAAAATACCCAACTGGTCAA+AGG + chr7_2:11688799-11688818 Msa1049000:intron 40.0%
TATTGGTCCTTTGACCAGTT+GGG - chr7_2:11688809-11688828 None:intergenic 40.0%
ACCAATAGAGCTACTAATGC+TGG + chr7_2:11688822-11688841 Msa1049000:CDS 40.0%
! CAGTTGGATTTTTCACCTCT+TGG - chr7_2:11688942-11688961 None:intergenic 40.0%
CAAGAGGTGAAAAATCCAAC+TGG + chr7_2:11688940-11688959 Msa1049000:CDS 40.0%
! ATGCATGAATACCGATTGGA+GGG + chr7_2:11688966-11688985 Msa1049000:CDS 40.0%
TTACCATTCCATGTGTGGAT+CGG - chr7_2:11689031-11689050 None:intergenic 40.0%
! GTCTTTGAGAAGCGTAATTG+TGG + chr7_2:11689573-11689592 Msa1049000:intron 40.0%
! ATTTGATGGTCCTTCTCTAG+AGG - chr7_2:11689637-11689656 None:intergenic 40.0%
! ATGTTGTCATCTCGCGTTTT+TGG - chr7_2:11689783-11689802 None:intergenic 40.0%
! GCAATTGTTGCTTCAGCTAA+AGG - chr7_2:11689870-11689889 None:intergenic 40.0%
TGATGCTGATATCTCATCTG+TGG + chr7_2:11689974-11689993 Msa1049000:intron 40.0%
ACATGTTTCAAAGGTGGTCT+AGG + chr7_2:11690009-11690028 Msa1049000:intron 40.0%
CTTCTTCAAGGATGTGTACT+AGG - chr7_2:11690721-11690740 None:intergenic 40.0%
! GTCCCTTTTATCAGGTTTAG+AGG + chr7_2:11690862-11690881 Msa1049000:CDS 40.0%
CGCCTCTAAACCTGATAAAA+GGG - chr7_2:11690867-11690886 None:intergenic 40.0%
! CCTTTTATCAGGTTTAGAGG+CGG + chr7_2:11690865-11690884 Msa1049000:CDS 40.0%
TATAGTCAGATGACCTAGGG+GGG - chr7_2:11688191-11688210 None:intergenic 45.0%
GTATAGTCAGATGACCTAGG+GGG - chr7_2:11688192-11688211 None:intergenic 45.0%
!!! GCAAATTTTGGTTTACCCCC+AGG - chr7_2:11688261-11688280 None:intergenic 45.0%
AGGGACAGAAAATACCCAAC+TGG + chr7_2:11688792-11688811 Msa1049000:intron 45.0%
CTATTGGTCCTTTGACCAGT+TGG - chr7_2:11688810-11688829 None:intergenic 45.0%
! GCCAGCATTAGTAGCTCTAT+TGG - chr7_2:11688826-11688845 None:intergenic 45.0%
! GAGCTACTAATGCTGGCTAT+TGG + chr7_2:11688829-11688848 Msa1049000:CDS 45.0%
TACATAGGAAGAGCTCCAAG+AGG + chr7_2:11688924-11688943 Msa1049000:CDS 45.0%
GTATTCATGCATGACCCAGT+TGG - chr7_2:11688958-11688977 None:intergenic 45.0%
GGTCATGCATGAATACCGAT+TGG + chr7_2:11688962-11688981 Msa1049000:CDS 45.0%
! CATGCATGAATACCGATTGG+AGG + chr7_2:11688965-11688984 Msa1049000:CDS 45.0%
AGAGTGAGTTACCCTCCAAT+CGG - chr7_2:11688980-11688999 None:intergenic 45.0%
ATCGGTTGTGCTCAGGAAAA+AGG - chr7_2:11689013-11689032 None:intergenic 45.0%
TGGATGGGTCAAAACTTGGA+AGG + chr7_2:11689604-11689623 Msa1049000:intron 45.0%
! AGGTCTAACTCCTCTAGAGA+AGG + chr7_2:11689624-11689643 Msa1049000:intron 45.0%
TGATTCCAACCTAGCCTCAA+TGG + chr7_2:11689890-11689909 Msa1049000:intron 45.0%
TGATGAATTCCCGACCATTG+AGG - chr7_2:11689907-11689926 None:intergenic 45.0%
GATTTGTCACCAGCTTCTAC+TGG + chr7_2:11690038-11690057 Msa1049000:intron 45.0%
CGGAAAAAGGACGCTATATC+CGG - chr7_2:11690781-11690800 None:intergenic 45.0%
! CGGATATAGCGTCCTTTTTC+CGG + chr7_2:11690779-11690798 Msa1049000:intron 45.0%
CCGCCTCTAAACCTGATAAA+AGG - chr7_2:11690868-11690887 None:intergenic 45.0%
TTTATCAGGTTTAGAGGCGG+TGG + chr7_2:11690868-11690887 Msa1049000:CDS 45.0%
!!! TTGTTTTTATATAATATTAT+AGG + chr7_2:11688113-11688132 Msa1049000:intron 5.0%
GGGTTTCAAAATACCCCCCT+AGG + chr7_2:11688175-11688194 Msa1049000:intron 50.0%
GGGGGTAAACTGAACCAAAG+AGG + chr7_2:11688292-11688311 Msa1049000:intron 50.0%
ACGTTGTTCGTCGTCCTCTT+TGG - chr7_2:11688309-11688328 None:intergenic 50.0%
GCTGGCTATTGGAAAGCAAC+AGG + chr7_2:11688840-11688859 Msa1049000:CDS 50.0%
CAACCGATCCACACATGGAA+TGG + chr7_2:11689025-11689044 Msa1049000:CDS 50.0%
TCCAACCTAGCCTCAATGGT+CGG + chr7_2:11689894-11689913 Msa1049000:intron 50.0%
AATTCCCGACCATTGAGGCT+AGG - chr7_2:11689902-11689921 None:intergenic 50.0%
GATGCAAGTCCAGTAGAAGC+TGG - chr7_2:11690050-11690069 None:intergenic 50.0%
TGTGTGGATCGGTTGTGCTC+AGG - chr7_2:11689020-11689039 None:intergenic 55.0%
GAGCACAACCGATCCACACA+TGG + chr7_2:11689020-11689039 Msa1049000:CDS 55.0%
CCAACCTAGCCTCAATGGTC+GGG + chr7_2:11689895-11689914 Msa1049000:intron 55.0%
AACGATCACGTGCGCGTGAA+AGG + chr7_2:11690897-11690916 Msa1049000:CDS 55.0%
ACGATCACGTGCGCGTGAAA+GGG + chr7_2:11690898-11690917 Msa1049000:CDS 55.0%
CCCGACCATTGAGGCTAGGT+TGG - chr7_2:11689898-11689917 None:intergenic 60.0%
CGATCACGTGCGCGTGAAAG+GGG + chr7_2:11690899-11690918 Msa1049000:CDS 60.0%
ACGTGCGCGTGAAAGGGGCG+TGG + chr7_2:11690904-11690923 Msa1049000:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 11687917 11690940 11687917 ID=Msa1049000;Name=Msa1049000
chr7_2 mRNA 11687917 11690940 11687917 ID=Msa1049000-mRNA-1;Parent=Msa1049000;Name=Msa1049000-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0|0|0.66|1|1|3|0|159
chr7_2 exon 11687917 11688056 11687917 ID=Msa1049000-mRNA-1:exon:2964;Parent=Msa1049000-mRNA-1
chr7_2 exon 11688800 11689046 11688800 ID=Msa1049000-mRNA-1:exon:2965;Parent=Msa1049000-mRNA-1
chr7_2 exon 11690848 11690940 11690848 ID=Msa1049000-mRNA-1:exon:2966;Parent=Msa1049000-mRNA-1
chr7_2 CDS 11687917 11688056 11687917 ID=Msa1049000-mRNA-1:cds;Parent=Msa1049000-mRNA-1
chr7_2 CDS 11688800 11689046 11688800 ID=Msa1049000-mRNA-1:cds;Parent=Msa1049000-mRNA-1
chr7_2 CDS 11690848 11690940 11690848 ID=Msa1049000-mRNA-1:cds;Parent=Msa1049000-mRNA-1
Gene Sequence

>Msa1049000

ATGGAAAATGAAAAGGTCAAATTTGATGTTGGTTTTCGATTCTTTCCGACCGATGAAGAGCTTATAAATCAATACCTTGTCAAGAAGGTTGATGACAATAGCTTCTGTGCTATAGCTATTGCAGAAGTTGATATGAATAAAAAATACCCAACTGGTCAAAGGACCAATAGAGCTACTAATGCTGGCTATTGGAAAGCAACAGGCAAAGACAAAGAGATTTACAAGGGAAATTCATTAATTGGGATGAAAAAAACACTGGTTTTCTACATAGGAAGAGCTCCAAGAGGTGAAAAATCCAACTGGGTCATGCATGAATACCGATTGGAGGGTAACTCACTCTCTAAGCACAACCTTTTTCCTGAGCACAACCGATCCACACATGGAATGGTGTATTGTATGATGTCCCTTTTATCAGGTTTAGAGGCGGTGGTTCGAGAACGATCACGTGCGCGTGAAAGGGGCGTGGAACAGAATCAGTGA
Protein sequence

>Msa1049000

MENEKVKFDVGFRFFPTDEELINQYLVKKVDDNSFCAIAIAEVDMNKKYPTGQRTNRATNAGYWKATGKDKEIYKGNSLIGMKKTLVFYIGRAPRGEKSNWVMHEYRLEGNSLSKHNLFPEHNRSTHGMVYCMMSLLSGLEAVVRERSRARERGVEQNQ*