Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1049520 | AES77592.1 | 65.812 | 117 | 17 | 2 | 29 | 145 | 95 | 188 | 1.12e-42 | 153 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1049520 | sp|Q38997|KIN10_ARATH | 43.353 | 173 | 65 | 2 | 7 | 146 | 108 | 280 | 1.93e-37 | 140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1049520 | G7L475 | 65.812 | 117 | 17 | 2 | 29 | 145 | 95 | 188 | 5.36e-43 | 153 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1049520 | MtrunA17_Chr6g0453681 | 41.808 | 177 | 70 | 2 | 7 | 150 | 108 | 284 | 1.87e-36 | 134 |
| Msa1049520 | MtrunA17_Chr6g0468751 | 42.197 | 173 | 67 | 2 | 7 | 146 | 108 | 280 | 3.38e-36 | 133 |
| Msa1049520 | MtrunA17_Chr3g0132671 | 38.125 | 160 | 62 | 2 | 19 | 145 | 154 | 309 | 3.46e-30 | 117 |
| Msa1049520 | MtrunA17_Chr7g0218511 | 92.000 | 50 | 4 | 0 | 30 | 79 | 29 | 78 | 6.63e-30 | 106 |
| Msa1049520 | MtrunA17_Chr6g0453671 | 35.593 | 177 | 73 | 4 | 7 | 146 | 108 | 280 | 8.86e-28 | 108 |
| Msa1049520 | MtrunA17_Chr1g0150321 | 32.886 | 149 | 64 | 2 | 29 | 141 | 123 | 271 | 1.35e-16 | 78.2 |
| Msa1049520 | MtrunA17_Chr4g0063881 | 32.374 | 139 | 60 | 3 | 33 | 137 | 126 | 264 | 6.32e-16 | 76.3 |
| Msa1049520 | MtrunA17_Chr5g0441011 | 31.973 | 147 | 64 | 3 | 30 | 140 | 125 | 271 | 1.34e-15 | 75.5 |
| Msa1049520 | MtrunA17_Chr3g0107051 | 29.371 | 143 | 65 | 3 | 31 | 137 | 133 | 275 | 4.94e-14 | 70.9 |
| Msa1049520 | MtrunA17_Chr5g0428031 | 32.394 | 142 | 62 | 3 | 30 | 137 | 121 | 262 | 4.96e-14 | 70.9 |
| Msa1049520 | MtrunA17_Chr8g0346071 | 30.769 | 143 | 65 | 3 | 29 | 137 | 128 | 270 | 8.20e-14 | 70.1 |
| Msa1049520 | MtrunA17_Chr2g0304111 | 30.345 | 145 | 65 | 3 | 29 | 137 | 134 | 278 | 1.53e-13 | 69.3 |
| Msa1049520 | MtrunA17_Chr4g0059751 | 30.556 | 144 | 63 | 2 | 33 | 139 | 211 | 354 | 4.46e-13 | 67.8 |
| Msa1049520 | MtrunA17_Chr4g0074111 | 32.231 | 121 | 68 | 3 | 29 | 146 | 128 | 237 | 4.59e-13 | 67.8 |
| Msa1049520 | MtrunA17_Chr4g0013131 | 33.333 | 126 | 71 | 3 | 29 | 145 | 122 | 243 | 5.18e-13 | 67.8 |
| Msa1049520 | MtrunA17_Chr1g0205421 | 31.081 | 148 | 66 | 2 | 30 | 141 | 123 | 270 | 7.23e-13 | 67.4 |
| Msa1049520 | MtrunA17_Chr2g0284011 | 30.822 | 146 | 85 | 4 | 33 | 166 | 126 | 267 | 1.90e-12 | 66.2 |
| Msa1049520 | MtrunA17_Chr3g0114511 | 29.167 | 144 | 66 | 2 | 30 | 137 | 141 | 284 | 5.26e-12 | 64.7 |
| Msa1049520 | MtrunA17_Chr3g0107011 | 26.708 | 161 | 78 | 3 | 29 | 149 | 124 | 284 | 1.26e-11 | 63.5 |
| Msa1049520 | MtrunA17_Chr5g0432491 | 32.787 | 122 | 69 | 3 | 33 | 145 | 138 | 255 | 1.45e-11 | 63.5 |
| Msa1049520 | MtrunA17_Chr4g0072831 | 31.008 | 129 | 70 | 3 | 29 | 140 | 100 | 226 | 2.67e-11 | 62.4 |
| Msa1049520 | MtrunA17_Chr2g0284031 | 31.200 | 125 | 73 | 3 | 31 | 146 | 143 | 263 | 3.04e-11 | 62.8 |
| Msa1049520 | MtrunA17_Chr8g0346081 | 28.671 | 143 | 68 | 3 | 29 | 137 | 128 | 270 | 3.10e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1049520 | AT3G29160.3 | 42.373 | 177 | 69 | 2 | 7 | 150 | 109 | 285 | 7.40e-39 | 138 |
| Msa1049520 | AT3G01090.2 | 43.353 | 173 | 65 | 2 | 7 | 146 | 131 | 303 | 1.88e-38 | 140 |
| Msa1049520 | AT3G01090.3 | 43.353 | 173 | 65 | 2 | 7 | 146 | 108 | 280 | 1.97e-38 | 140 |
| Msa1049520 | AT3G01090.1 | 43.353 | 173 | 65 | 2 | 7 | 146 | 108 | 280 | 1.97e-38 | 140 |
| Msa1049520 | AT3G29160.1 | 42.373 | 177 | 69 | 2 | 7 | 150 | 109 | 285 | 9.50e-38 | 138 |
| Msa1049520 | AT3G29160.2 | 42.373 | 177 | 69 | 2 | 7 | 150 | 109 | 285 | 9.50e-38 | 138 |
| Msa1049520 | AT5G39440.1 | 40.123 | 162 | 59 | 4 | 17 | 145 | 122 | 278 | 5.38e-29 | 114 |
| Msa1049520 | AT4G24400.2 | 34.483 | 145 | 61 | 3 | 30 | 140 | 121 | 265 | 7.57e-18 | 82.0 |
| Msa1049520 | AT4G24400.1 | 34.247 | 146 | 62 | 3 | 29 | 140 | 120 | 265 | 1.02e-17 | 82.0 |
| Msa1049520 | AT4G30960.1 | 29.333 | 150 | 70 | 2 | 30 | 143 | 135 | 284 | 3.25e-14 | 71.6 |
| Msa1049520 | AT1G30270.3 | 29.167 | 144 | 66 | 2 | 30 | 137 | 46 | 189 | 3.79e-14 | 71.2 |
| Msa1049520 | AT1G30270.1 | 29.167 | 144 | 66 | 2 | 30 | 137 | 143 | 286 | 4.62e-14 | 71.2 |
| Msa1049520 | AT1G30270.2 | 29.167 | 144 | 66 | 2 | 30 | 137 | 143 | 286 | 5.55e-14 | 70.9 |
| Msa1049520 | AT5G35410.2 | 30.935 | 139 | 62 | 2 | 33 | 137 | 126 | 264 | 5.63e-14 | 70.9 |
| Msa1049520 | AT5G35410.1 | 30.935 | 139 | 62 | 2 | 33 | 137 | 126 | 264 | 6.85e-14 | 70.9 |
| Msa1049520 | AT2G26980.5 | 29.054 | 148 | 69 | 3 | 29 | 140 | 125 | 272 | 1.90e-13 | 69.3 |
| Msa1049520 | AT1G01140.3 | 29.861 | 144 | 65 | 3 | 30 | 137 | 131 | 274 | 2.25e-13 | 69.3 |
| Msa1049520 | AT1G01140.1 | 29.861 | 144 | 65 | 3 | 30 | 137 | 131 | 274 | 2.28e-13 | 69.3 |
| Msa1049520 | AT2G26980.1 | 29.054 | 148 | 69 | 3 | 29 | 140 | 125 | 272 | 2.34e-13 | 68.9 |
| Msa1049520 | AT2G26980.3 | 29.054 | 148 | 69 | 3 | 29 | 140 | 125 | 272 | 2.53e-13 | 68.9 |
| Msa1049520 | AT2G26980.4 | 29.054 | 148 | 69 | 3 | 29 | 140 | 135 | 282 | 2.71e-13 | 68.9 |
| Msa1049520 | AT5G01810.3 | 28.859 | 149 | 70 | 2 | 29 | 141 | 122 | 270 | 3.18e-13 | 68.6 |
| Msa1049520 | AT5G01810.1 | 28.859 | 149 | 70 | 2 | 29 | 141 | 122 | 270 | 3.21e-13 | 68.6 |
| Msa1049520 | AT5G01810.2 | 28.859 | 149 | 70 | 2 | 29 | 141 | 122 | 270 | 3.21e-13 | 68.6 |
| Msa1049520 | AT5G57630.3 | 30.070 | 143 | 66 | 3 | 29 | 137 | 34 | 176 | 3.28e-13 | 68.2 |
| Msa1049520 | AT2G34180.1 | 32.867 | 143 | 60 | 3 | 31 | 137 | 169 | 311 | 5.01e-13 | 68.2 |
| Msa1049520 | AT5G57630.1 | 30.282 | 142 | 65 | 3 | 30 | 137 | 123 | 264 | 5.76e-13 | 67.8 |
| Msa1049520 | AT5G57630.2 | 30.070 | 143 | 66 | 3 | 29 | 137 | 122 | 264 | 6.93e-13 | 67.8 |
| Msa1049520 | AT5G58380.1 | 32.540 | 126 | 72 | 3 | 29 | 145 | 122 | 243 | 2.14e-12 | 66.2 |
| Msa1049520 | AT4G40010.1 | 31.757 | 148 | 60 | 4 | 31 | 137 | 113 | 260 | 2.60e-11 | 62.8 |
| Msa1049520 | AT2G26980.2 | 29.323 | 133 | 58 | 3 | 29 | 125 | 125 | 257 | 7.50e-11 | 60.8 |
Find 46 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCCCACTTATCAATTCTT+TGG | 0.244961 | 7_2:+12882871 | None:intergenic |
| CATTGGCTAGCACCGAGTTT+TGG | 0.324487 | 7_2:-12881996 | Msa1049520:CDS |
| CTTCCTAGTTATCTATCTTC+TGG | 0.338162 | 7_2:-12882896 | Msa1049520:CDS |
| ACAGTATATTCTCAGGTTTA+AGG | 0.339212 | 7_2:+12883430 | None:intergenic |
| AATGTGAAGCTAGCTGATTT+TGG | 0.355745 | 7_2:-12883393 | Msa1049520:CDS |
| TCTGGATACTGAGGACTTCC+AGG | 0.362421 | 7_2:+12883327 | None:intergenic |
| CTCGGTGCTAGCCAATGAAT+TGG | 0.393376 | 7_2:+12882002 | None:intergenic |
| TCTCTGCACTTCCAATTCAT+TGG | 0.403901 | 7_2:-12882013 | Msa1049520:CDS |
| TTGGAAGTGCAGAGAAGAAA+GGG | 0.416025 | 7_2:+12882021 | None:intergenic |
| GATGTACAAACCTCAGGATC+TGG | 0.439271 | 7_2:+12883309 | None:intergenic |
| CAGTAAACGTATAGTACATT+TGG | 0.444981 | 7_2:-12883454 | Msa1049520:CDS |
| GGACCTTCCTCGTTACTTGG+TGG | 0.500239 | 7_2:-12882783 | Msa1049520:CDS |
| GACCTTCCTCGTTACTTGGT+GGG | 0.503408 | 7_2:-12882782 | Msa1049520:CDS |
| ATTGGAAGTGCAGAGAAGAA+AGG | 0.517898 | 7_2:+12882020 | None:intergenic |
| ATTGATAAGTGGGATGCTTA+CGG | 0.524008 | 7_2:-12882864 | Msa1049520:CDS |
| GCGTCCAACAGTATATTCTC+AGG | 0.527929 | 7_2:+12883423 | None:intergenic |
| AAAGCATCCTTGGTTTGCTA+CGG | 0.531440 | 7_2:-12882804 | Msa1049520:CDS |
| GGGTAGTGAGATTTCACCAT+TGG | 0.535363 | 7_2:+12881767 | None:intergenic |
| GTCAAATTCGTAATGATCCA+AGG | 0.543163 | 7_2:-12881867 | Msa1049520:CDS |
| ATTTCACCATTGGAAGGTGA+AGG | 0.546161 | 7_2:+12881777 | None:intergenic |
| TAAACCTGAGAATATACTGT+TGG | 0.550416 | 7_2:-12883427 | Msa1049520:CDS |
| GCACCAGAAGATAGATAACT+AGG | 0.556831 | 7_2:+12882893 | None:intergenic |
| TATCGAGTGGAAGACAAACT+TGG | 0.558501 | 7_2:-12883914 | Msa1049520:CDS |
| AAACTTGGTGAAGGTGTCGT+TGG | 0.572778 | 7_2:-12883899 | Msa1049520:CDS |
| AACAGTGCTCCTCCAAAACT+CGG | 0.576606 | 7_2:+12881984 | None:intergenic |
| GGCGGTGTACATATCAAGAC+TGG | 0.577536 | 7_2:-12883878 | Msa1049520:intron |
| GGTGCCAAAGAATTGATAAG+TGG | 0.578697 | 7_2:-12882875 | Msa1049520:CDS |
| CTTGGTGAAGGTGTCGTTGG+CGG | 0.581328 | 7_2:-12883896 | Msa1049520:CDS |
| TTGGAGGAGCACTGTTCGTG+TGG | 0.587775 | 7_2:-12881977 | Msa1049520:CDS |
| CTATGCGAAATCATGCGTAA+TGG | 0.591763 | 7_2:-12883369 | Msa1049520:CDS |
| GTCACAGGAAAACTGTATGC+GGG | 0.595347 | 7_2:-12883138 | Msa1049520:CDS |
| TGGAAGTGCAGAGAAGAAAG+GGG | 0.600904 | 7_2:+12882022 | None:intergenic |
| AGTGAGATTTCACCATTGGA+AGG | 0.604708 | 7_2:+12881771 | None:intergenic |
| TGTTCGTGTGGAATTACTAG+AGG | 0.606015 | 7_2:-12881965 | Msa1049520:CDS |
| ACCTCAGGATCTGGATACTG+AGG | 0.620043 | 7_2:+12883318 | None:intergenic |
| GTGGAAGACAAACTTGGTGA+AGG | 0.634028 | 7_2:-12883908 | Msa1049520:CDS |
| TCCTCAGTATCCAGATCCTG+AGG | 0.644016 | 7_2:-12883319 | Msa1049520:intron |
| GGAAGGTCCGTAGCAAACCA+AGG | 0.657930 | 7_2:+12882797 | None:intergenic |
| CATTACGCATGATTTCGCAT+AGG | 0.660361 | 7_2:+12883370 | None:intergenic |
| TGTCACAGGAAAACTGTATG+CGG | 0.666323 | 7_2:-12883139 | Msa1049520:CDS |
| GATAAGTGGGATGCTTACGG+TGG | 0.667341 | 7_2:-12882861 | Msa1049520:CDS |
| TGCCCACCAAGTAACGAGGA+AGG | 0.667349 | 7_2:+12882780 | None:intergenic |
| TACTTGCCCACCAAGTAACG+AGG | 0.667858 | 7_2:+12882776 | None:intergenic |
| GTGCCAAAGAATTGATAAGT+GGG | 0.687407 | 7_2:-12882874 | Msa1049520:CDS |
| TCGAAAGATATCATACACAA+CGG | 0.703291 | 7_2:+12881804 | None:intergenic |
| ATTCAGAACAGAAACTATCG+AGG | 0.711401 | 7_2:-12881913 | Msa1049520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAAAAAAATATTACTT+AGG | + | chr7_2:12881975-12881994 | None:intergenic | 10.0% |
| !! | AAAGAAAAAAAATATTACTT+AGG | + | chr7_2:12881975-12881994 | None:intergenic | 10.0% |
| !!! | TTTTGTCATTTGTTATATAT+AGG | - | chr7_2:12882791-12882810 | Msa1049520:CDS | 15.0% |
| !!! | GACATTGTTATTATTTTTAT+CGG | + | chr7_2:12882891-12882910 | None:intergenic | 15.0% |
| !! | GATAAAAATAATAACAATGT+CGG | - | chr7_2:12882890-12882909 | Msa1049520:CDS | 15.0% |
| !! | TATAAATATTGATCTATACA+AGG | - | chr7_2:12883261-12883280 | Msa1049520:intron | 15.0% |
| !! | ATAAATATTGATCTATACAA+GGG | - | chr7_2:12883262-12883281 | Msa1049520:intron | 15.0% |
| !! | TTAATATTATAAACAATGAG+CGG | + | chr7_2:12883426-12883445 | None:intergenic | 15.0% |
| !! | ATATAAGTATGACTTATATA+AGG | - | chr7_2:12883521-12883540 | Msa1049520:intron | 15.0% |
| !! | TATAAGTATGACTTATATAA+GGG | - | chr7_2:12883522-12883541 | Msa1049520:intron | 15.0% |
| !!! | TTTTGTCATTTGTTATATAT+AGG | - | chr7_2:12882791-12882810 | Msa1049520:CDS | 15.0% |
| !!! | GACATTGTTATTATTTTTAT+CGG | + | chr7_2:12882891-12882910 | None:intergenic | 15.0% |
| !! | GATAAAAATAATAACAATGT+CGG | - | chr7_2:12882890-12882909 | Msa1049520:CDS | 15.0% |
| !! | TATAAATATTGATCTATACA+AGG | - | chr7_2:12883261-12883280 | Msa1049520:intron | 15.0% |
| !! | ATAAATATTGATCTATACAA+GGG | - | chr7_2:12883262-12883281 | Msa1049520:intron | 15.0% |
| !! | TTAATATTATAAACAATGAG+CGG | + | chr7_2:12883426-12883445 | None:intergenic | 15.0% |
| !! | ATATAAGTATGACTTATATA+AGG | - | chr7_2:12883521-12883540 | Msa1049520:intron | 15.0% |
| !! | TATAAGTATGACTTATATAA+GGG | - | chr7_2:12883522-12883541 | Msa1049520:intron | 15.0% |
| !!! | TTCAATATTTTATAATCGCT+CGG | - | chr7_2:12882019-12882038 | Msa1049520:CDS | 20.0% |
| !!! | TTTTGGTATTACTTTTGTTA+AGG | - | chr7_2:12883001-12883020 | Msa1049520:intron | 20.0% |
| !!! | ATTTTGGTTAAAAACAAATC+GGG | + | chr7_2:12883042-12883061 | None:intergenic | 20.0% |
| !!! | GATTTTGGTTAAAAACAAAT+CGG | + | chr7_2:12883043-12883062 | None:intergenic | 20.0% |
| !!! | NNNCGTTATTCAGTATATTT+TGG | - | chr7_2:12883228-12883247 | Msa1049520:intron | 20.0% |
| !! | ATAAGTATGACTTATATAAG+GGG | - | chr7_2:12883523-12883542 | Msa1049520:intron | 20.0% |
| !!! | TTCAATATTTTATAATCGCT+CGG | - | chr7_2:12882019-12882038 | Msa1049520:CDS | 20.0% |
| !!! | TTTTGGTATTACTTTTGTTA+AGG | - | chr7_2:12883001-12883020 | Msa1049520:intron | 20.0% |
| !!! | ATTTTGGTTAAAAACAAATC+GGG | + | chr7_2:12883042-12883061 | None:intergenic | 20.0% |
| !!! | GATTTTGGTTAAAAACAAAT+CGG | + | chr7_2:12883043-12883062 | None:intergenic | 20.0% |
| !!! | NNNCGTTATTCAGTATATTT+TGG | - | chr7_2:12883228-12883247 | Msa1049520:intron | 20.0% |
| !! | ATAAGTATGACTTATATAAG+GGG | - | chr7_2:12883523-12883542 | Msa1049520:intron | 20.0% |
| !!! | TTTGTTTTCGACAAACTATA+TGG | + | chr7_2:12881883-12881902 | None:intergenic | 25.0% |
| !! | TCAATATTTTATAATCGCTC+GGG | - | chr7_2:12882020-12882039 | Msa1049520:CDS | 25.0% |
| !! | TATTTTCTTCAGAAAATTCC+TGG | - | chr7_2:12882379-12882398 | Msa1049520:intron | 25.0% |
| !!! | TTTGTTTTTGTGAGTTTGTA+AGG | - | chr7_2:12882734-12882753 | Msa1049520:intron | 25.0% |
| ! | AAAAGTAATACCAAAACTCA+CGG | + | chr7_2:12882997-12883016 | None:intergenic | 25.0% |
| !! | TGATTTTCCAGATTGATAAA+GGG | - | chr7_2:12883064-12883083 | Msa1049520:intron | 25.0% |
| ! | CTGAATATGTTAGTTGAAAT+TGG | - | chr7_2:12883090-12883109 | Msa1049520:intron | 25.0% |
| ! | AAAATTACTAAACTCGTTGT+TGG | - | chr7_2:12883577-12883596 | Msa1049520:intron | 25.0% |
| ! | AAATTACTAAACTCGTTGTT+GGG | - | chr7_2:12883578-12883597 | Msa1049520:intron | 25.0% |
| ! | AAGTTCTATAAATAGAACTC+TGG | - | chr7_2:12883646-12883665 | Msa1049520:intron | 25.0% |
| !! | TAATTTCGATTTTCTTTCCT+TGG | + | chr7_2:12883877-12883896 | None:intergenic | 25.0% |
| !!! | TTTGTTTTCGACAAACTATA+TGG | + | chr7_2:12881883-12881902 | None:intergenic | 25.0% |
| !! | TCAATATTTTATAATCGCTC+GGG | - | chr7_2:12882020-12882039 | Msa1049520:CDS | 25.0% |
| !! | TATTTTCTTCAGAAAATTCC+TGG | - | chr7_2:12882379-12882398 | Msa1049520:intron | 25.0% |
| !!! | TTTGTTTTTGTGAGTTTGTA+AGG | - | chr7_2:12882734-12882753 | Msa1049520:intron | 25.0% |
| ! | AAAAGTAATACCAAAACTCA+CGG | + | chr7_2:12882997-12883016 | None:intergenic | 25.0% |
| !! | TGATTTTCCAGATTGATAAA+GGG | - | chr7_2:12883064-12883083 | Msa1049520:intron | 25.0% |
| ! | CTGAATATGTTAGTTGAAAT+TGG | - | chr7_2:12883090-12883109 | Msa1049520:intron | 25.0% |
| ! | AAAATTACTAAACTCGTTGT+TGG | - | chr7_2:12883577-12883596 | Msa1049520:intron | 25.0% |
| ! | AAATTACTAAACTCGTTGTT+GGG | - | chr7_2:12883578-12883597 | Msa1049520:intron | 25.0% |
| ! | AAGTTCTATAAATAGAACTC+TGG | - | chr7_2:12883646-12883665 | Msa1049520:intron | 25.0% |
| !! | TAATTTCGATTTTCTTTCCT+TGG | + | chr7_2:12883877-12883896 | None:intergenic | 25.0% |
| ATATCTTGAAGTACATCAAG+AGG | - | chr7_2:12882122-12882141 | Msa1049520:intron | 30.0% | |
| CAGTAAACGTATAGTACATT+TGG | - | chr7_2:12882270-12882289 | Msa1049520:intron | 30.0% | |
| ACAGTATATTCTCAGGTTTA+AGG | + | chr7_2:12882297-12882316 | None:intergenic | 30.0% | |
| TAAACCTGAGAATATACTGT+TGG | - | chr7_2:12882297-12882316 | Msa1049520:intron | 30.0% | |
| ! | AGAAGAGTATGAATCATAAG+AGG | + | chr7_2:12882554-12882573 | None:intergenic | 30.0% |
| !!! | TTCATACTCTTCTTTTTTGC+AGG | - | chr7_2:12882561-12882580 | Msa1049520:intron | 30.0% |
| AACAGACGAATTATGATGAT+TGG | + | chr7_2:12882772-12882791 | None:intergenic | 30.0% | |
| ! | TACTTTTGTTAAGGCACAAA+AGG | - | chr7_2:12883010-12883029 | Msa1049520:intron | 30.0% |
| ! | AATCTGGAAAATCACGATTT+TGG | + | chr7_2:12883058-12883077 | None:intergenic | 30.0% |
| ! | GTGATTTTCCAGATTGATAA+AGG | - | chr7_2:12883063-12883082 | Msa1049520:intron | 30.0% |
| TATACACATGAGTGTTATCA+TGG | - | chr7_2:12883337-12883356 | Msa1049520:CDS | 30.0% | |
| TCGAAAGATATCATACACAA+CGG | + | chr7_2:12883923-12883942 | None:intergenic | 30.0% | |
| ATATCTTGAAGTACATCAAG+AGG | - | chr7_2:12882122-12882141 | Msa1049520:intron | 30.0% | |
| CAGTAAACGTATAGTACATT+TGG | - | chr7_2:12882270-12882289 | Msa1049520:intron | 30.0% | |
| ACAGTATATTCTCAGGTTTA+AGG | + | chr7_2:12882297-12882316 | None:intergenic | 30.0% | |
| TAAACCTGAGAATATACTGT+TGG | - | chr7_2:12882297-12882316 | Msa1049520:intron | 30.0% | |
| ! | AGAAGAGTATGAATCATAAG+AGG | + | chr7_2:12882554-12882573 | None:intergenic | 30.0% |
| !!! | TTCATACTCTTCTTTTTTGC+AGG | - | chr7_2:12882561-12882580 | Msa1049520:intron | 30.0% |
| AACAGACGAATTATGATGAT+TGG | + | chr7_2:12882772-12882791 | None:intergenic | 30.0% | |
| ! | TACTTTTGTTAAGGCACAAA+AGG | - | chr7_2:12883010-12883029 | Msa1049520:intron | 30.0% |
| ! | AATCTGGAAAATCACGATTT+TGG | + | chr7_2:12883058-12883077 | None:intergenic | 30.0% |
| ! | GTGATTTTCCAGATTGATAA+AGG | - | chr7_2:12883063-12883082 | Msa1049520:intron | 30.0% |
| TATACACATGAGTGTTATCA+TGG | - | chr7_2:12883337-12883356 | Msa1049520:CDS | 30.0% | |
| TCGAAAGATATCATACACAA+CGG | + | chr7_2:12883923-12883942 | None:intergenic | 30.0% | |
| ! | TAGTTTGTCGAAAACAAACG+TGG | - | chr7_2:12881885-12881904 | Msa1049520:CDS | 35.0% |
| TATTTGGTATAACCTCGTAG+AGG | + | chr7_2:12882063-12882082 | None:intergenic | 35.0% | |
| TCTACGAGGTTATACCAAAT+AGG | - | chr7_2:12882062-12882081 | Msa1049520:intron | 35.0% | |
| CTACGAGGTTATACCAAATA+GGG | - | chr7_2:12882063-12882082 | Msa1049520:intron | 35.0% | |
| AAGTACATCAAGAGGAACAA+AGG | - | chr7_2:12882130-12882149 | Msa1049520:intron | 35.0% | |
| AGTACATCAAGAGGAACAAA+GGG | - | chr7_2:12882131-12882150 | Msa1049520:intron | 35.0% | |
| !!! | AGCGAGAAAATTTTTTCAGC+AGG | - | chr7_2:12882168-12882187 | Msa1049520:intron | 35.0% |
| TTGTCAACTAACCTCTACTT+TGG | - | chr7_2:12882233-12882252 | Msa1049520:intron | 35.0% | |
| TGTCAACTAACCTCTACTTT+GGG | - | chr7_2:12882234-12882253 | Msa1049520:intron | 35.0% | |
| !! | AATGTGAAGCTAGCTGATTT+TGG | - | chr7_2:12882331-12882350 | Msa1049520:intron | 35.0% |
| ACTATAGATGTACAAACCTC+AGG | + | chr7_2:12882424-12882443 | None:intergenic | 35.0% | |
| CTTTACTAGTTCGATGATCT+CGG | + | chr7_2:12882701-12882720 | None:intergenic | 35.0% | |
| CTTCCTAGTTATCTATCTTC+TGG | - | chr7_2:12882828-12882847 | Msa1049520:CDS | 35.0% | |
| GTGCCAAAGAATTGATAAGT+GGG | - | chr7_2:12882850-12882869 | Msa1049520:CDS | 35.0% | |
| CATCCCACTTATCAATTCTT+TGG | + | chr7_2:12882856-12882875 | None:intergenic | 35.0% | |
| ATTGATAAGTGGGATGCTTA+CGG | - | chr7_2:12882860-12882879 | Msa1049520:CDS | 35.0% | |
| TCAGAATCCCTTTATCAATC+TGG | + | chr7_2:12883074-12883093 | None:intergenic | 35.0% | |
| CAATGAAGATATCGAGACAA+AGG | - | chr7_2:12883308-12883327 | Msa1049520:intron | 35.0% | |
| ACATGAGTGTTATCATGGAA+AGG | - | chr7_2:12883342-12883361 | Msa1049520:CDS | 35.0% | |
| ! | ACTTGACATTCTTGTCACTT+GGG | - | chr7_2:12883377-12883396 | Msa1049520:CDS | 35.0% |
| CAACGTTACTAGAACCTATT+GGG | - | chr7_2:12883468-12883487 | Msa1049520:intron | 35.0% | |
| GCAAGTCATAAGTCACTATT+GGG | + | chr7_2:12883614-12883633 | None:intergenic | 35.0% | |
| TGCAAGTCATAAGTCACTAT+TGG | + | chr7_2:12883615-12883634 | None:intergenic | 35.0% | |
| ATTCAGAACAGAAACTATCG+AGG | - | chr7_2:12883811-12883830 | Msa1049520:intron | 35.0% | |
| GTCAAATTCGTAATGATCCA+AGG | - | chr7_2:12883857-12883876 | Msa1049520:intron | 35.0% | |
| ! | TAGTTTGTCGAAAACAAACG+TGG | - | chr7_2:12881885-12881904 | Msa1049520:CDS | 35.0% |
| TATTTGGTATAACCTCGTAG+AGG | + | chr7_2:12882063-12882082 | None:intergenic | 35.0% | |
| TCTACGAGGTTATACCAAAT+AGG | - | chr7_2:12882062-12882081 | Msa1049520:intron | 35.0% | |
| CTACGAGGTTATACCAAATA+GGG | - | chr7_2:12882063-12882082 | Msa1049520:intron | 35.0% | |
| AAGTACATCAAGAGGAACAA+AGG | - | chr7_2:12882130-12882149 | Msa1049520:intron | 35.0% | |
| AGTACATCAAGAGGAACAAA+GGG | - | chr7_2:12882131-12882150 | Msa1049520:intron | 35.0% | |
| !!! | AGCGAGAAAATTTTTTCAGC+AGG | - | chr7_2:12882168-12882187 | Msa1049520:intron | 35.0% |
| TTGTCAACTAACCTCTACTT+TGG | - | chr7_2:12882233-12882252 | Msa1049520:intron | 35.0% | |
| TGTCAACTAACCTCTACTTT+GGG | - | chr7_2:12882234-12882253 | Msa1049520:intron | 35.0% | |
| !! | AATGTGAAGCTAGCTGATTT+TGG | - | chr7_2:12882331-12882350 | Msa1049520:intron | 35.0% |
| ACTATAGATGTACAAACCTC+AGG | + | chr7_2:12882424-12882443 | None:intergenic | 35.0% | |
| CTTTACTAGTTCGATGATCT+CGG | + | chr7_2:12882701-12882720 | None:intergenic | 35.0% | |
| CTTCCTAGTTATCTATCTTC+TGG | - | chr7_2:12882828-12882847 | Msa1049520:CDS | 35.0% | |
| GTGCCAAAGAATTGATAAGT+GGG | - | chr7_2:12882850-12882869 | Msa1049520:CDS | 35.0% | |
| CATCCCACTTATCAATTCTT+TGG | + | chr7_2:12882856-12882875 | None:intergenic | 35.0% | |
| ATTGATAAGTGGGATGCTTA+CGG | - | chr7_2:12882860-12882879 | Msa1049520:CDS | 35.0% | |
| TCAGAATCCCTTTATCAATC+TGG | + | chr7_2:12883074-12883093 | None:intergenic | 35.0% | |
| CAATGAAGATATCGAGACAA+AGG | - | chr7_2:12883308-12883327 | Msa1049520:intron | 35.0% | |
| ACATGAGTGTTATCATGGAA+AGG | - | chr7_2:12883342-12883361 | Msa1049520:CDS | 35.0% | |
| ! | ACTTGACATTCTTGTCACTT+GGG | - | chr7_2:12883377-12883396 | Msa1049520:CDS | 35.0% |
| CAACGTTACTAGAACCTATT+GGG | - | chr7_2:12883468-12883487 | Msa1049520:intron | 35.0% | |
| GCAAGTCATAAGTCACTATT+GGG | + | chr7_2:12883614-12883633 | None:intergenic | 35.0% | |
| TGCAAGTCATAAGTCACTAT+TGG | + | chr7_2:12883615-12883634 | None:intergenic | 35.0% | |
| ATTCAGAACAGAAACTATCG+AGG | - | chr7_2:12883811-12883830 | Msa1049520:intron | 35.0% | |
| GTCAAATTCGTAATGATCCA+AGG | - | chr7_2:12883857-12883876 | Msa1049520:intron | 35.0% | |
| !! | CATTTTTGAGCGTTATCGAG+TGG | - | chr7_2:12881797-12881816 | Msa1049520:CDS | 40.0% |
| TATCGAGTGGAAGACAAACT+TGG | - | chr7_2:12881810-12881829 | Msa1049520:CDS | 40.0% | |
| TCGACAAACTATATGGCAAC+AGG | + | chr7_2:12881876-12881895 | None:intergenic | 40.0% | |
| GAGGTTATACCAAATAGGGA+AGG | - | chr7_2:12882067-12882086 | Msa1049520:intron | 40.0% | |
| CATTACGCATGATTTCGCAT+AGG | + | chr7_2:12882357-12882376 | None:intergenic | 40.0% | |
| CTATGCGAAATCATGCGTAA+TGG | - | chr7_2:12882355-12882374 | Msa1049520:intron | 40.0% | |
| !!! | TCTTTTTTGCAGGTTGTCAC+AGG | - | chr7_2:12882571-12882590 | Msa1049520:intron | 40.0% |
| TGTCACAGGAAAACTGTATG+CGG | - | chr7_2:12882585-12882604 | Msa1049520:intron | 40.0% | |
| ! | CTATGTCAACAAGCTCCTTT+TGG | - | chr7_2:12882655-12882674 | Msa1049520:intron | 40.0% |
| TAGTTCGATGATCTCGGAAA+CGG | + | chr7_2:12882695-12882714 | None:intergenic | 40.0% | |
| CGAGATCATCGAACTAGTAA+AGG | - | chr7_2:12882699-12882718 | Msa1049520:intron | 40.0% | |
| GCACCAGAAGATAGATAACT+AGG | + | chr7_2:12882834-12882853 | None:intergenic | 40.0% | |
| GGTGCCAAAGAATTGATAAG+TGG | - | chr7_2:12882849-12882868 | Msa1049520:CDS | 40.0% | |
| !! | CGGACATTAAAAAGCATCCT+TGG | - | chr7_2:12882910-12882929 | Msa1049520:CDS | 40.0% |
| !! | AAAGCATCCTTGGTTTGCTA+CGG | - | chr7_2:12882920-12882939 | Msa1049520:intron | 40.0% |
| ACAGCCAAATAGACTTTGAC+AGG | - | chr7_2:12882970-12882989 | Msa1049520:intron | 40.0% | |
| CAGCCAAATAGACTTTGACA+GGG | - | chr7_2:12882971-12882990 | Msa1049520:intron | 40.0% | |
| GGTGACAATAACTATGCCTT+GGG | - | chr7_2:12883283-12883302 | Msa1049520:intron | 40.0% | |
| CGATATCTTCATTGATCCCA+AGG | + | chr7_2:12883302-12883321 | None:intergenic | 40.0% | |
| CACTTGACATTCTTGTCACT+TGG | - | chr7_2:12883376-12883395 | Msa1049520:CDS | 40.0% | |
| ! | CCAATAGGTTCTAGTAACGT+TGG | + | chr7_2:12883470-12883489 | None:intergenic | 40.0% |
| CCAACGTTACTAGAACCTAT+TGG | - | chr7_2:12883467-12883486 | Msa1049520:CDS | 40.0% | |
| TTCTTTGTGTGTGACCCAAT+AGG | + | chr7_2:12883485-12883504 | None:intergenic | 40.0% | |
| !! | AACTCTGGTGCTGAAGTTTT+AGG | - | chr7_2:12883661-12883680 | Msa1049520:intron | 40.0% |
| ! | TTGGAAGTGCAGAGAAGAAA+GGG | + | chr7_2:12883706-12883725 | None:intergenic | 40.0% |
| ! | ATTGGAAGTGCAGAGAAGAA+AGG | + | chr7_2:12883707-12883726 | None:intergenic | 40.0% |
| TCTCTGCACTTCCAATTCAT+TGG | - | chr7_2:12883711-12883730 | Msa1049520:intron | 40.0% | |
| TGTTCGTGTGGAATTACTAG+AGG | - | chr7_2:12883759-12883778 | Msa1049520:intron | 40.0% | |
| ! | GATTTTCCTTCACCTTCCAA+TGG | - | chr7_2:12883941-12883960 | Msa1049520:CDS | 40.0% |
| !! | CATTTTTGAGCGTTATCGAG+TGG | - | chr7_2:12881797-12881816 | Msa1049520:CDS | 40.0% |
| TATCGAGTGGAAGACAAACT+TGG | - | chr7_2:12881810-12881829 | Msa1049520:CDS | 40.0% | |
| TCGACAAACTATATGGCAAC+AGG | + | chr7_2:12881876-12881895 | None:intergenic | 40.0% | |
| GAGGTTATACCAAATAGGGA+AGG | - | chr7_2:12882067-12882086 | Msa1049520:intron | 40.0% | |
| CATTACGCATGATTTCGCAT+AGG | + | chr7_2:12882357-12882376 | None:intergenic | 40.0% | |
| CTATGCGAAATCATGCGTAA+TGG | - | chr7_2:12882355-12882374 | Msa1049520:intron | 40.0% | |
| !!! | TCTTTTTTGCAGGTTGTCAC+AGG | - | chr7_2:12882571-12882590 | Msa1049520:intron | 40.0% |
| TGTCACAGGAAAACTGTATG+CGG | - | chr7_2:12882585-12882604 | Msa1049520:intron | 40.0% | |
| ! | CTATGTCAACAAGCTCCTTT+TGG | - | chr7_2:12882655-12882674 | Msa1049520:intron | 40.0% |
| TAGTTCGATGATCTCGGAAA+CGG | + | chr7_2:12882695-12882714 | None:intergenic | 40.0% | |
| CGAGATCATCGAACTAGTAA+AGG | - | chr7_2:12882699-12882718 | Msa1049520:intron | 40.0% | |
| GCACCAGAAGATAGATAACT+AGG | + | chr7_2:12882834-12882853 | None:intergenic | 40.0% | |
| GGTGCCAAAGAATTGATAAG+TGG | - | chr7_2:12882849-12882868 | Msa1049520:CDS | 40.0% | |
| !! | CGGACATTAAAAAGCATCCT+TGG | - | chr7_2:12882910-12882929 | Msa1049520:CDS | 40.0% |
| !! | AAAGCATCCTTGGTTTGCTA+CGG | - | chr7_2:12882920-12882939 | Msa1049520:intron | 40.0% |
| ACAGCCAAATAGACTTTGAC+AGG | - | chr7_2:12882970-12882989 | Msa1049520:intron | 40.0% | |
| CAGCCAAATAGACTTTGACA+GGG | - | chr7_2:12882971-12882990 | Msa1049520:intron | 40.0% | |
| GGTGACAATAACTATGCCTT+GGG | - | chr7_2:12883283-12883302 | Msa1049520:intron | 40.0% | |
| CGATATCTTCATTGATCCCA+AGG | + | chr7_2:12883302-12883321 | None:intergenic | 40.0% | |
| CACTTGACATTCTTGTCACT+TGG | - | chr7_2:12883376-12883395 | Msa1049520:CDS | 40.0% | |
| ! | CCAATAGGTTCTAGTAACGT+TGG | + | chr7_2:12883470-12883489 | None:intergenic | 40.0% |
| CCAACGTTACTAGAACCTAT+TGG | - | chr7_2:12883467-12883486 | Msa1049520:CDS | 40.0% | |
| TTCTTTGTGTGTGACCCAAT+AGG | + | chr7_2:12883485-12883504 | None:intergenic | 40.0% | |
| !! | AACTCTGGTGCTGAAGTTTT+AGG | - | chr7_2:12883661-12883680 | Msa1049520:intron | 40.0% |
| ! | TTGGAAGTGCAGAGAAGAAA+GGG | + | chr7_2:12883706-12883725 | None:intergenic | 40.0% |
| ! | ATTGGAAGTGCAGAGAAGAA+AGG | + | chr7_2:12883707-12883726 | None:intergenic | 40.0% |
| TCTCTGCACTTCCAATTCAT+TGG | - | chr7_2:12883711-12883730 | Msa1049520:intron | 40.0% | |
| TGTTCGTGTGGAATTACTAG+AGG | - | chr7_2:12883759-12883778 | Msa1049520:intron | 40.0% | |
| ! | GATTTTCCTTCACCTTCCAA+TGG | - | chr7_2:12883941-12883960 | Msa1049520:CDS | 40.0% |
| ! | GTGGAAGACAAACTTGGTGA+AGG | - | chr7_2:12881816-12881835 | Msa1049520:CDS | 45.0% |
| !! | AAACTTGGTGAAGGTGTCGT+TGG | - | chr7_2:12881825-12881844 | Msa1049520:CDS | 45.0% |
| GCACAAATGCCTTCCCTATT+TGG | + | chr7_2:12882079-12882098 | None:intergenic | 45.0% | |
| GCGTCCAACAGTATATTCTC+AGG | + | chr7_2:12882304-12882323 | None:intergenic | 45.0% | |
| GATGTACAAACCTCAGGATC+TGG | + | chr7_2:12882418-12882437 | None:intergenic | 45.0% | |
| GTCACAGGAAAACTGTATGC+GGG | - | chr7_2:12882586-12882605 | Msa1049520:intron | 45.0% | |
| !! | CAGCTCTAAACACCTACTTC+AGG | + | chr7_2:12882613-12882632 | None:intergenic | 45.0% |
| ! | GAAGTAGGTGTTTAGAGCTG+TGG | - | chr7_2:12882613-12882632 | Msa1049520:intron | 45.0% |
| GGGTGACAATAACTATGCCT+TGG | - | chr7_2:12883282-12883301 | Msa1049520:intron | 45.0% | |
| ! | TGGAAGTGCAGAGAAGAAAG+GGG | + | chr7_2:12883705-12883724 | None:intergenic | 45.0% |
| AACAGTGCTCCTCCAAAACT+CGG | + | chr7_2:12883743-12883762 | None:intergenic | 45.0% | |
| ! | GTGGAAGACAAACTTGGTGA+AGG | - | chr7_2:12881816-12881835 | Msa1049520:CDS | 45.0% |
| !! | AAACTTGGTGAAGGTGTCGT+TGG | - | chr7_2:12881825-12881844 | Msa1049520:CDS | 45.0% |
| GCACAAATGCCTTCCCTATT+TGG | + | chr7_2:12882079-12882098 | None:intergenic | 45.0% | |
| GCGTCCAACAGTATATTCTC+AGG | + | chr7_2:12882304-12882323 | None:intergenic | 45.0% | |
| GATGTACAAACCTCAGGATC+TGG | + | chr7_2:12882418-12882437 | None:intergenic | 45.0% | |
| GTCACAGGAAAACTGTATGC+GGG | - | chr7_2:12882586-12882605 | Msa1049520:intron | 45.0% | |
| !! | CAGCTCTAAACACCTACTTC+AGG | + | chr7_2:12882613-12882632 | None:intergenic | 45.0% |
| ! | GAAGTAGGTGTTTAGAGCTG+TGG | - | chr7_2:12882613-12882632 | Msa1049520:intron | 45.0% |
| GGGTGACAATAACTATGCCT+TGG | - | chr7_2:12883282-12883301 | Msa1049520:intron | 45.0% | |
| ! | TGGAAGTGCAGAGAAGAAAG+GGG | + | chr7_2:12883705-12883724 | None:intergenic | 45.0% |
| AACAGTGCTCCTCCAAAACT+CGG | + | chr7_2:12883743-12883762 | None:intergenic | 45.0% | |
| GGCGGTGTACATATCAAGAC+TGG | - | chr7_2:12881846-12881865 | Msa1049520:CDS | 50.0% | |
| CCTCTACTTTGGGCAGAGTT+CGG | - | chr7_2:12882244-12882263 | Msa1049520:intron | 50.0% | |
| TCTGGATACTGAGGACTTCC+AGG | + | chr7_2:12882400-12882419 | None:intergenic | 50.0% | |
| TCCTCAGTATCCAGATCCTG+AGG | - | chr7_2:12882405-12882424 | Msa1049520:intron | 50.0% | |
| ACCTCAGGATCTGGATACTG+AGG | + | chr7_2:12882409-12882428 | None:intergenic | 50.0% | |
| !! | GCTCCTTTTGGAGATCACGA+TGG | - | chr7_2:12882667-12882686 | Msa1049520:intron | 50.0% |
| GTGCCATCGTGATCTCCAAA+AGG | + | chr7_2:12882673-12882692 | None:intergenic | 50.0% | |
| GATAAGTGGGATGCTTACGG+TGG | - | chr7_2:12882863-12882882 | Msa1049520:CDS | 50.0% | |
| TACGGACCTTCCTCGTTACT+TGG | - | chr7_2:12882938-12882957 | Msa1049520:intron | 50.0% | |
| GACCTTCCTCGTTACTTGGT+GGG | - | chr7_2:12882942-12882961 | Msa1049520:intron | 50.0% | |
| TACTTGCCCACCAAGTAACG+AGG | + | chr7_2:12882951-12882970 | None:intergenic | 50.0% | |
| CGGCCCTGTCAAAGTCTATT+TGG | + | chr7_2:12882977-12882996 | None:intergenic | 50.0% | |
| ! | TTTGACAGGGCCGTGAGTTT+TGG | - | chr7_2:12882984-12883003 | Msa1049520:intron | 50.0% |
| !! | CTCGGTGCTAGCCAATGAAT+TGG | + | chr7_2:12883725-12883744 | None:intergenic | 50.0% |
| !! | CATTGGCTAGCACCGAGTTT+TGG | - | chr7_2:12883728-12883747 | Msa1049520:intron | 50.0% |
| GGCGGTGTACATATCAAGAC+TGG | - | chr7_2:12881846-12881865 | Msa1049520:CDS | 50.0% | |
| CCTCTACTTTGGGCAGAGTT+CGG | - | chr7_2:12882244-12882263 | Msa1049520:intron | 50.0% | |
| TCTGGATACTGAGGACTTCC+AGG | + | chr7_2:12882400-12882419 | None:intergenic | 50.0% | |
| TCCTCAGTATCCAGATCCTG+AGG | - | chr7_2:12882405-12882424 | Msa1049520:intron | 50.0% | |
| ACCTCAGGATCTGGATACTG+AGG | + | chr7_2:12882409-12882428 | None:intergenic | 50.0% | |
| !! | GCTCCTTTTGGAGATCACGA+TGG | - | chr7_2:12882667-12882686 | Msa1049520:intron | 50.0% |
| GTGCCATCGTGATCTCCAAA+AGG | + | chr7_2:12882673-12882692 | None:intergenic | 50.0% | |
| GATAAGTGGGATGCTTACGG+TGG | - | chr7_2:12882863-12882882 | Msa1049520:CDS | 50.0% | |
| TACGGACCTTCCTCGTTACT+TGG | - | chr7_2:12882938-12882957 | Msa1049520:intron | 50.0% | |
| GACCTTCCTCGTTACTTGGT+GGG | - | chr7_2:12882942-12882961 | Msa1049520:intron | 50.0% | |
| TACTTGCCCACCAAGTAACG+AGG | + | chr7_2:12882951-12882970 | None:intergenic | 50.0% | |
| CGGCCCTGTCAAAGTCTATT+TGG | + | chr7_2:12882977-12882996 | None:intergenic | 50.0% | |
| ! | TTTGACAGGGCCGTGAGTTT+TGG | - | chr7_2:12882984-12883003 | Msa1049520:intron | 50.0% |
| !! | CTCGGTGCTAGCCAATGAAT+TGG | + | chr7_2:12883725-12883744 | None:intergenic | 50.0% |
| !! | CATTGGCTAGCACCGAGTTT+TGG | - | chr7_2:12883728-12883747 | Msa1049520:intron | 50.0% |
| !! | CTTGGTGAAGGTGTCGTTGG+CGG | - | chr7_2:12881828-12881847 | Msa1049520:CDS | 55.0% |
| CCGAACTCTGCCCAAAGTAG+AGG | + | chr7_2:12882247-12882266 | None:intergenic | 55.0% | |
| CTGTATGCGGGACCTGAAGT+AGG | - | chr7_2:12882598-12882617 | Msa1049520:intron | 55.0% | |
| GGAAGGTCCGTAGCAAACCA+AGG | + | chr7_2:12882930-12882949 | None:intergenic | 55.0% | |
| GGACCTTCCTCGTTACTTGG+TGG | - | chr7_2:12882941-12882960 | Msa1049520:intron | 55.0% | |
| TGCCCACCAAGTAACGAGGA+AGG | + | chr7_2:12882947-12882966 | None:intergenic | 55.0% | |
| !! | TGGCTAGCACCGAGTTTTGG+AGG | - | chr7_2:12883731-12883750 | Msa1049520:intron | 55.0% |
| !! | TTGGAGGAGCACTGTTCGTG+TGG | - | chr7_2:12883747-12883766 | Msa1049520:intron | 55.0% |
| !! | CTTGGTGAAGGTGTCGTTGG+CGG | - | chr7_2:12881828-12881847 | Msa1049520:CDS | 55.0% |
| CCGAACTCTGCCCAAAGTAG+AGG | + | chr7_2:12882247-12882266 | None:intergenic | 55.0% | |
| CTGTATGCGGGACCTGAAGT+AGG | - | chr7_2:12882598-12882617 | Msa1049520:intron | 55.0% | |
| GGAAGGTCCGTAGCAAACCA+AGG | + | chr7_2:12882930-12882949 | None:intergenic | 55.0% | |
| GGACCTTCCTCGTTACTTGG+TGG | - | chr7_2:12882941-12882960 | Msa1049520:intron | 55.0% | |
| TGCCCACCAAGTAACGAGGA+AGG | + | chr7_2:12882947-12882966 | None:intergenic | 55.0% | |
| !! | TGGCTAGCACCGAGTTTTGG+AGG | - | chr7_2:12883731-12883750 | Msa1049520:intron | 55.0% |
| !! | TTGGAGGAGCACTGTTCGTG+TGG | - | chr7_2:12883747-12883766 | Msa1049520:intron | 55.0% |
| TCGCGTCATACGCCTCTACG+AGG | - | chr7_2:12882048-12882067 | Msa1049520:intron | 60.0% | |
| TCGCGTCATACGCCTCTACG+AGG | - | chr7_2:12882048-12882067 | Msa1049520:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 12881780 | 12883966 | 12881780 | ID=Msa1049520;Name=Msa1049520 |
| chr7_2 | mRNA | 12881780 | 12883966 | 12881780 | ID=Msa1049520-mRNA-1;Parent=Msa1049520;Name=Msa1049520-mRNA-1;_AED=0.43;_eAED=0.42;_QI=0|0|0|0.6|1|1|5|0|236 |
| chr7_2 | exon | 12883879 | 12883966 | 12883879 | ID=Msa1049520-mRNA-1:exon:3272;Parent=Msa1049520-mRNA-1 |
| chr7_2 | exon | 12883320 | 12883486 | 12883320 | ID=Msa1049520-mRNA-1:exon:3271;Parent=Msa1049520-mRNA-1 |
| chr7_2 | exon | 12883131 | 12883163 | 12883131 | ID=Msa1049520-mRNA-1:exon:3270;Parent=Msa1049520-mRNA-1 |
| chr7_2 | exon | 12882779 | 12882933 | 12882779 | ID=Msa1049520-mRNA-1:exon:3269;Parent=Msa1049520-mRNA-1 |
| chr7_2 | exon | 12881780 | 12882047 | 12881780 | ID=Msa1049520-mRNA-1:exon:3268;Parent=Msa1049520-mRNA-1 |
| chr7_2 | CDS | 12883879 | 12883966 | 12883879 | ID=Msa1049520-mRNA-1:cds;Parent=Msa1049520-mRNA-1 |
| chr7_2 | CDS | 12883320 | 12883486 | 12883320 | ID=Msa1049520-mRNA-1:cds;Parent=Msa1049520-mRNA-1 |
| chr7_2 | CDS | 12883131 | 12883163 | 12883131 | ID=Msa1049520-mRNA-1:cds;Parent=Msa1049520-mRNA-1 |
| chr7_2 | CDS | 12882779 | 12882933 | 12882779 | ID=Msa1049520-mRNA-1:cds;Parent=Msa1049520-mRNA-1 |
| chr7_2 | CDS | 12881780 | 12882047 | 12881780 | ID=Msa1049520-mRNA-1:cds;Parent=Msa1049520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
