AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1050850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1050850 MtrunA17_Chr7g0220111 97.590 249 6 0 1 249 1 249 0.0 501
Msa1050850 MtrunA17_Chr6g0455511 88.095 252 25 4 1 249 1 250 1.52e-162 449
Msa1050850 MtrunA17_Chr3g0122251 64.173 254 76 5 1 248 1 245 2.26e-104 302
Msa1050850 MtrunA17_Chr5g0420091 62.844 218 77 3 1 217 1 215 7.12e-93 272
Msa1050850 MtrunA17_Chr4g0061671 64.607 178 62 1 1 178 1 177 6.66e-77 230
Msa1050850 MtrunA17_Chr8g0351051 48.438 256 120 7 1 249 1 251 5.19e-69 213
Msa1050850 MtrunA17_Chr4g0061691 58.580 169 69 1 1 168 1 169 7.54e-59 186
Msa1050850 MtrunA17_Chr8g0366231 47.534 223 106 5 1 221 1 214 6.55e-56 179
Msa1050850 MtrunA17_Chr8g0377551 53.968 189 74 5 63 248 1 179 2.07e-54 173
Msa1050850 MtrunA17_Chr6g0474371 51.445 173 82 1 1 171 1 173 2.11e-53 171
Msa1050850 MtrunA17_Chr5g0420081 42.986 221 118 2 1 220 1 214 1.45e-49 162
Msa1050850 MtrunA17_Chr7g0220121 38.372 258 143 5 1 249 1 251 2.54e-49 162
Msa1050850 MtrunA17_Chr1g0204111 48.555 173 86 2 1 171 17 188 7.59e-49 161
Msa1050850 MtrunA17_Chr8g0380021 41.935 217 123 3 1 215 17 232 9.00e-48 158
Msa1050850 MtrunA17_Chr4g0057151 50.000 168 82 2 1 167 1 167 6.49e-47 155
Msa1050850 MtrunA17_Chr3g0077501 48.023 177 86 4 1 174 1 174 3.12e-46 154
Msa1050850 MtrunA17_Chr3g0097101 42.793 222 116 5 1 219 16 229 1.44e-45 152
Msa1050850 MtrunA17_Chr2g0284911 45.652 184 97 3 1 183 16 197 1.56e-45 153
Msa1050850 MtrunA17_Chr8g0351031 43.269 208 105 4 1 201 1 202 7.98e-45 150
Msa1050850 MtrunA17_Chr7g0246431 49.112 169 84 2 1 168 1 168 2.44e-43 145
Msa1050850 MtrunA17_Chr2g0279821 43.258 178 100 1 1 178 1 177 5.45e-42 143
Msa1050850 MtrunA17_Chr8g0351041 46.707 167 76 4 1 160 1 161 4.21e-40 136
Msa1050850 MtrunA17_Chr5g0411691 42.135 178 101 2 1 178 1 176 5.06e-39 135
Msa1050850 MtrunA17_Chr4g0049541 41.573 178 103 1 1 178 1 177 8.21e-39 134
Msa1050850 MtrunA17_Chr4g0018421 44.379 169 92 2 1 167 1 169 1.13e-38 133
Msa1050850 MtrunA17_Chr8g0377561 96.721 61 2 0 1 61 1 61 4.11e-36 123
Msa1050850 MtrunA17_Chr1g0164791 40.805 174 96 3 1 168 1 173 3.54e-35 125
Msa1050850 MtrunA17_Chr5g0427401 38.356 219 121 6 1 215 1 209 8.88e-35 124
Msa1050850 MtrunA17_Chr4g0020221 44.944 178 92 3 1 174 1 176 2.84e-33 121
Msa1050850 MtrunA17_Chr3g0125241 44.521 146 76 2 1 145 26 167 2.91e-33 119
Msa1050850 MtrunA17_Chr7g0246381 80.882 68 13 0 1 68 1 68 3.09e-33 115
Msa1050850 MtrunA17_Chr5g0412271 41.279 172 91 3 1 167 1 167 1.64e-31 115
Msa1050850 MtrunA17_Chr5g0412461 41.860 172 90 3 1 167 1 167 1.70e-31 115
Msa1050850 MtrunA17_Chr2g0308251 66.667 75 25 0 1 75 1 75 1.51e-29 106
Msa1050850 MtrunA17_Chr3g0142191 42.405 158 85 3 1 157 1 153 2.58e-29 110
Msa1050850 MtrunA17_Chr1g0159661 39.080 174 97 3 1 173 1 166 4.06e-29 108
Msa1050850 MtrunA17_Chr5g0404951 38.674 181 96 5 1 173 1 174 4.68e-28 107
Msa1050850 MtrunA17_Chr4g0049901 38.542 192 107 6 1 186 27 213 5.06e-27 104
Msa1050850 MtrunA17_Chr1g0173161 78.333 60 13 0 1 60 1 60 1.98e-26 98.2
Msa1050850 MtrunA17_Chr5g0427921 65.000 60 21 0 1 60 1 60 9.83e-22 85.5
Msa1050850 MtrunA17_Chr2g0308271 33.505 194 113 4 57 249 28 206 3.18e-21 88.2
Msa1050850 MtrunA17_Chr4g0044071 64.912 57 20 0 1 57 1 57 3.93e-21 85.5
Msa1050850 MtrunA17_Chr3g0134451 57.143 70 30 0 1 70 1 70 1.19e-20 89.0
Msa1050850 MtrunA17_Chr5g0425191 66.667 57 19 0 1 57 1 57 1.29e-20 84.0
Msa1050850 MtrunA17_Chr1g0166611 80.000 45 9 0 16 60 20 64 7.87e-19 80.1
Msa1050850 MtrunA17_Chr2g0292791 52.174 69 32 1 2 70 9 76 2.37e-17 78.6
Msa1050850 MtrunA17_Chr2g0325971 49.275 69 34 1 2 70 9 76 8.57e-17 77.0
Msa1050850 MtrunA17_Chr1g0208561 50.704 71 32 2 2 70 7 76 8.92e-17 76.6
Msa1050850 MtrunA17_Chr3g0089141 50.704 71 32 2 2 70 7 76 1.07e-16 76.6
Msa1050850 MtrunA17_Chr1g0208581 49.275 69 34 1 2 70 9 76 1.40e-16 76.3
Msa1050850 MtrunA17_Chr3g0099421 52.174 69 32 1 2 70 34 101 2.27e-16 76.3
Msa1050850 MtrunA17_Chr8g0379021 36.364 143 70 6 2 127 12 150 3.11e-16 74.3
Msa1050850 MtrunA17_Chr3g0099411 49.275 69 34 1 2 70 9 76 8.21e-16 73.9
Msa1050850 MtrunA17_Chr8g0355091 49.275 69 34 1 2 70 9 76 9.34e-16 74.3
Msa1050850 MtrunA17_Chr5g0419601 51.429 70 33 1 1 70 8 76 1.03e-15 73.9
Msa1050850 MtrunA17_Chr1g0206701 49.275 69 34 1 2 70 9 76 1.14e-15 73.9
Msa1050850 MtrunA17_Chr8g0357771 31.609 174 102 4 1 167 1 164 1.31e-15 72.8
Msa1050850 MtrunA17_Chr1g0206721 49.275 69 34 1 2 70 9 76 1.33e-15 73.9
Msa1050850 MtrunA17_Chr2g0333981 34.043 141 78 4 1 127 11 150 2.65e-15 71.6
Msa1050850 MtrunA17_Chr2g0317451 50.725 69 33 1 2 70 9 76 2.97e-15 72.8
Msa1050850 MtrunA17_Chr2g0317481 50.725 69 33 1 2 70 9 76 3.16e-15 72.8
Msa1050850 MtrunA17_Chr1g0149391 50.725 69 33 1 2 70 9 76 3.22e-15 72.8
Msa1050850 MtrunA17_Chr1g0187361 47.826 69 35 1 2 70 9 76 4.06e-15 72.4
Msa1050850 MtrunA17_Chr8g0376821 52.632 57 27 0 1 57 1 57 5.40e-15 70.9
Msa1050850 MtrunA17_Chr5g0417661 54.717 53 24 0 1 53 56 108 1.13e-14 68.9
Msa1050850 MtrunA17_Chr1g0169761 52.632 57 27 0 1 57 1 57 1.84e-14 69.3
Msa1050850 MtrunA17_Chr1g0188671 47.826 69 35 1 2 70 47 114 2.11e-14 70.9
Msa1050850 MtrunA17_Chr4g0052061 47.541 61 32 0 1 61 1 61 2.44e-14 68.6
Msa1050850 MtrunA17_Chr1g0206991 46.377 69 36 1 2 70 9 76 2.72e-14 68.9
Msa1050850 MtrunA17_Chr5g0422941 49.275 69 34 1 2 70 9 76 2.75e-14 70.1
Msa1050850 MtrunA17_Chr1g0175611 50.877 57 28 0 1 57 1 57 4.23e-14 68.2
Msa1050850 MtrunA17_Chr5g0422421 49.275 69 34 1 2 70 9 76 5.80e-14 69.3
Msa1050850 MtrunA17_Chr1g0180591 49.123 57 29 0 1 57 1 57 7.55e-14 67.8
Msa1050850 MtrunA17_Chr4g0074101 49.123 57 29 0 1 57 1 57 9.35e-14 67.8
Msa1050850 MtrunA17_Chr1g0175601 50.877 57 28 0 1 57 1 57 1.71e-13 67.0
Msa1050850 MtrunA17_Chr2g0300441 46.479 71 35 2 2 70 7 76 3.36e-13 67.0
Msa1050850 MtrunA17_Chr4g0060841 50.943 53 26 0 1 53 1 53 6.26e-13 67.4
Msa1050850 MtrunA17_Chr2g0300421 51.724 58 26 1 2 57 7 64 6.50e-13 65.1
Msa1050850 MtrunA17_Chr4g0018951 36.232 138 77 6 16 147 26 158 8.11e-13 64.7
Msa1050850 MtrunA17_Chr3g0089151 43.478 69 38 1 2 70 9 76 9.14e-13 63.5
Msa1050850 MtrunA17_Chr4g0052081 45.763 59 32 0 1 59 1 59 1.05e-12 64.7
Msa1050850 MtrunA17_Chr3g0119901 41.429 70 40 1 1 70 8 76 1.62e-12 64.7
Msa1050850 MtrunA17_Chr8g0356071 44.262 61 34 0 1 61 1 61 3.50e-12 62.8
Msa1050850 MtrunA17_Chr5g0427961 33.645 107 71 0 61 167 4 110 4.37e-12 62.8
Msa1050850 MtrunA17_Chr3g0085241 41.429 70 40 1 1 70 40 108 5.01e-12 63.9
Msa1050850 MtrunA17_Chr1g0206691 48.333 60 30 1 11 70 1 59 3.88e-11 61.2
Msa1050850 MtrunA17_Chr3g0111841 51.852 54 26 0 8 61 2 55 4.36e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1050850 AT3G02310.1 73.622 254 58 7 1 249 1 250 1.31e-129 367
Msa1050850 AT5G15800.1 73.725 255 57 6 1 249 1 251 4.69e-122 348
Msa1050850 AT5G15800.2 71.863 263 59 7 1 249 1 262 1.07e-120 345
Msa1050850 AT3G02310.2 84.795 171 25 1 1 170 1 171 3.51e-102 295
Msa1050850 AT1G24260.1 61.508 252 84 3 1 248 1 243 3.42e-98 287
Msa1050850 AT1G24260.2 61.265 253 84 3 1 248 1 244 4.08e-98 287
Msa1050850 AT1G24260.3 59.524 252 76 4 1 248 1 230 5.11e-92 271
Msa1050850 AT2G03710.1 52.471 263 106 4 1 249 1 258 3.69e-86 257
Msa1050850 AT2G03710.2 52.471 263 105 5 1 249 1 257 2.21e-84 252
Msa1050850 AT2G03710.3 65.116 172 59 1 1 171 1 172 2.80e-75 227
Msa1050850 AT2G45650.1 49.804 255 119 6 1 249 1 252 3.47e-71 219
Msa1050850 AT1G69120.2 53.448 174 80 1 1 173 1 174 1.30e-58 186
Msa1050850 AT1G69120.1 53.448 174 80 1 1 173 1 174 8.02e-58 184
Msa1050850 AT1G26310.1 54.545 176 77 1 1 173 1 176 7.33e-57 182
Msa1050850 AT5G60910.1 43.200 250 126 5 1 249 1 235 1.21e-54 176
Msa1050850 AT3G61120.1 52.601 173 80 2 1 173 1 171 1.98e-52 170
Msa1050850 AT4G09960.6 44.503 191 102 3 1 189 2 190 1.12e-49 163
Msa1050850 AT4G09960.1 44.503 191 102 3 1 189 1 189 1.13e-49 163
Msa1050850 AT4G09960.5 44.503 191 102 3 1 189 11 199 1.90e-49 162
Msa1050850 AT4G09960.3 44.503 191 102 3 1 189 27 215 5.07e-49 162
Msa1050850 AT2G45660.1 50.000 172 82 3 1 170 1 170 4.18e-47 156
Msa1050850 AT4G09960.2 44.103 195 93 6 1 183 1 191 7.36e-47 155
Msa1050850 AT4G09960.4 49.367 158 76 3 1 156 96 251 2.49e-46 157
Msa1050850 AT3G30260.1 51.948 154 69 2 1 151 1 152 3.54e-46 154
Msa1050850 AT3G58780.1 42.927 205 113 3 1 203 16 218 1.73e-45 153
Msa1050850 AT3G58780.5 42.927 205 113 3 1 203 22 224 2.00e-45 153
Msa1050850 AT2G45660.2 50.633 158 74 3 1 156 1 156 4.16e-45 149
Msa1050850 AT4G18960.1 45.745 188 97 4 2 187 18 202 6.17e-45 151
Msa1050850 AT2G42830.1 47.429 175 88 3 1 173 16 188 1.60e-44 150
Msa1050850 AT4G11880.2 51.282 156 76 0 1 156 1 156 2.05e-43 145
Msa1050850 AT4G11880.3 51.282 156 76 0 1 156 1 156 2.05e-43 145
Msa1050850 AT2G42830.2 48.734 158 77 3 1 156 16 171 3.12e-43 147
Msa1050850 AT3G58780.2 41.951 205 108 3 1 203 16 211 4.01e-43 146
Msa1050850 AT4G22950.2 47.093 172 90 1 1 172 1 171 8.34e-43 143
Msa1050850 AT4G37940.1 42.697 178 101 1 1 178 1 177 2.28e-42 144
Msa1050850 AT4G11880.4 50.000 172 86 0 1 172 1 172 3.87e-42 143
Msa1050850 AT4G11880.1 50.000 172 86 0 1 172 1 172 3.87e-42 143
Msa1050850 AT4G22950.3 47.904 167 86 1 1 167 1 166 5.50e-42 143
Msa1050850 AT4G22950.1 47.904 167 86 1 1 167 1 166 5.50e-42 143
Msa1050850 AT3G58780.4 51.007 149 69 3 1 147 16 162 1.11e-41 144
Msa1050850 AT3G58780.3 38.428 229 114 3 1 203 16 243 2.13e-41 143
Msa1050850 AT3G57230.1 42.135 178 102 1 1 178 1 177 5.01e-41 141
Msa1050850 AT3G57230.4 42.135 178 102 1 1 178 1 177 5.01e-41 141
Msa1050850 AT5G62165.3 45.109 184 95 3 1 183 1 179 4.19e-40 137
Msa1050850 AT5G62165.1 45.109 184 95 3 1 183 1 179 4.19e-40 137
Msa1050850 AT5G62165.2 45.109 184 95 3 1 183 1 179 4.19e-40 137
Msa1050850 AT3G57230.2 48.252 143 73 1 1 143 1 142 3.73e-39 133
Msa1050850 AT2G22630.1 40.449 178 105 1 1 178 1 177 2.43e-38 134
Msa1050850 AT2G22630.2 40.449 178 105 1 1 178 1 177 2.43e-38 134
Msa1050850 AT5G51870.1 41.146 192 107 3 1 190 1 188 2.46e-38 133
Msa1050850 AT4G37940.4 44.872 156 85 1 1 156 1 155 7.04e-38 132
Msa1050850 AT2G14210.1 44.311 167 93 0 1 167 1 167 8.80e-38 132
Msa1050850 AT2G14210.2 44.311 167 93 0 1 167 1 167 1.25e-37 132
Msa1050850 AT5G51870.4 40.594 202 114 3 1 200 1 198 1.98e-37 131
Msa1050850 AT5G62165.17 46.497 157 82 2 1 156 1 156 2.67e-37 129
Msa1050850 AT5G62165.12 46.497 157 82 2 1 156 1 156 2.67e-37 129
Msa1050850 AT5G62165.11 46.497 157 82 2 1 156 1 156 2.67e-37 129
Msa1050850 AT5G13790.2 41.629 221 121 4 1 217 1 217 2.71e-37 132
Msa1050850 AT5G51870.3 40.594 202 114 3 1 200 11 208 2.82e-37 131
Msa1050850 AT5G23260.2 39.336 211 116 4 1 210 1 200 3.29e-37 131
Msa1050850 AT5G23260.4 39.336 211 116 4 1 210 17 216 4.88e-37 131
Msa1050850 AT4G37940.3 47.183 142 74 1 1 142 1 141 5.40e-37 129
Msa1050850 AT5G13790.1 41.176 221 119 3 1 217 1 214 6.57e-37 131
Msa1050850 AT5G62165.6 46.259 147 77 2 1 146 1 146 4.17e-35 123
Msa1050850 AT5G62165.9 46.259 147 77 2 1 146 1 146 4.17e-35 123
Msa1050850 AT5G62165.7 46.259 147 77 2 1 146 1 146 4.17e-35 123
Msa1050850 AT5G62165.8 46.259 147 77 2 1 146 1 146 4.17e-35 123
Msa1050850 AT5G62165.13 46.259 147 77 2 1 146 1 146 4.17e-35 123
Msa1050850 AT5G62165.10 45.223 157 84 2 1 156 1 156 4.44e-35 124
Msa1050850 AT5G62165.4 45.223 157 84 2 1 156 1 156 4.44e-35 124
Msa1050850 AT5G51860.2 41.143 175 100 2 1 173 1 174 1.23e-34 123
Msa1050850 AT1G71692.1 40.761 184 101 1 1 176 1 184 1.32e-34 124
Msa1050850 AT3G57390.3 43.333 180 93 2 1 172 1 179 2.06e-34 124
Msa1050850 AT5G51860.1 38.342 193 110 3 1 191 1 186 2.88e-34 122
Msa1050850 AT5G65050.2 42.262 168 90 2 1 168 1 161 4.49e-34 121
Msa1050850 AT5G23260.1 38.863 211 112 5 1 210 17 211 5.26e-34 123
Msa1050850 AT3G57390.1 43.333 180 93 2 1 172 1 179 5.69e-34 123
Msa1050850 AT2G22540.3 39.881 168 99 2 1 167 1 167 6.64e-34 122
Msa1050850 AT2G22540.1 39.881 168 99 2 1 167 1 167 6.64e-34 122
Msa1050850 AT5G20240.1 40.230 174 95 3 1 173 1 166 1.27e-33 121
Msa1050850 AT5G65050.3 42.262 168 90 2 1 168 1 161 1.41e-33 120
Msa1050850 AT5G10140.4 41.860 172 89 3 1 168 1 165 1.48e-33 120
Msa1050850 AT5G51870.2 45.205 146 77 2 1 144 1 145 2.56e-33 119
Msa1050850 AT5G65050.5 41.071 168 81 2 1 168 1 150 2.89e-33 119
Msa1050850 AT5G65060.3 39.683 189 100 4 1 182 1 182 4.55e-33 119
Msa1050850 AT5G51870.5 45.205 146 77 2 1 144 24 168 1.12e-32 118
Msa1050850 AT5G65060.1 41.071 168 92 3 1 168 1 161 1.50e-32 118
Msa1050850 AT5G10140.2 44.898 147 74 2 1 147 1 140 1.82e-32 117
Msa1050850 AT5G10140.1 44.898 147 74 2 1 147 1 140 1.83e-32 117
Msa1050850 AT5G10140.3 44.898 147 74 2 1 147 1 140 2.69e-32 117
Msa1050850 AT5G65050.1 40.698 172 91 3 1 168 1 165 6.13e-32 115
Msa1050850 AT5G65060.2 39.881 168 83 3 1 168 1 150 1.18e-31 115
Msa1050850 AT5G20240.2 45.714 140 71 2 1 139 1 136 1.95e-31 113
Msa1050850 AT5G23260.3 42.857 147 81 2 1 146 1 145 2.61e-31 115
Msa1050850 AT4G24540.1 41.573 178 96 3 1 174 1 174 4.58e-31 114
Msa1050850 AT5G65070.1 40.526 190 99 4 1 188 1 178 5.45e-31 114
Msa1050850 AT5G62165.14 70.833 72 20 1 1 72 1 71 4.27e-30 108
Msa1050850 AT5G65080.3 41.401 157 83 3 1 156 8 156 5.08e-29 108
Msa1050850 AT2G22540.2 36.905 168 99 2 1 167 1 162 1.02e-28 109
Msa1050850 AT3G54340.1 37.037 189 114 2 1 188 1 185 7.91e-28 106
Msa1050850 AT5G65070.2 36.279 215 104 5 1 188 1 209 1.23e-27 106
Msa1050850 AT1G31140.1 41.497 147 85 1 1 146 1 147 1.73e-27 105
Msa1050850 AT1G31140.2 42.949 156 72 3 1 146 1 149 2.36e-27 105
Msa1050850 AT1G77080.5 37.989 179 104 2 1 179 1 172 5.77e-26 100
Msa1050850 AT5G65070.4 42.282 149 75 3 1 147 1 140 2.75e-25 97.8
Msa1050850 AT5G65080.2 39.355 155 86 2 1 155 8 154 2.94e-25 99.4
Msa1050850 AT1G77080.11 38.690 168 96 2 1 168 1 161 3.18e-25 98.6
Msa1050850 AT1G77080.4 38.690 168 96 2 1 168 1 161 5.72e-25 98.2
Msa1050850 AT5G65070.3 35.586 222 97 6 1 188 1 210 2.15e-24 97.8
Msa1050850 AT5G65070.5 36.413 184 85 5 1 156 1 180 5.90e-24 95.9
Msa1050850 AT1G77080.8 34.375 192 98 3 1 168 1 188 3.37e-22 91.7
Msa1050850 AT1G77080.2 36.905 168 95 3 1 168 1 157 6.72e-21 87.4
Msa1050850 AT1G77980.1 54.054 74 34 0 1 74 1 74 1.01e-20 89.7
Msa1050850 AT1G22130.1 55.714 70 31 0 1 70 1 70 1.46e-20 89.4
Msa1050850 AT1G69120.3 41.071 112 65 1 63 173 1 112 4.63e-20 85.1
Msa1050850 AT1G77080.12 36.538 156 88 3 1 156 1 145 1.75e-18 79.7
Msa1050850 AT1G77950.3 52.857 70 33 0 1 70 1 70 4.40e-18 81.3
Msa1050850 AT1G77950.2 52.857 70 33 0 1 70 1 70 4.40e-18 81.3
Msa1050850 AT1G77950.1 52.857 70 33 0 1 70 1 70 4.40e-18 81.3
Msa1050850 AT1G77950.4 52.857 70 33 0 1 70 1 70 4.40e-18 81.3
Msa1050850 AT4G37435.1 59.649 57 23 0 1 57 1 57 9.17e-17 76.3
Msa1050850 AT1G01530.1 52.941 68 31 1 1 68 6 72 4.55e-16 75.5
Msa1050850 AT5G60910.2 31.915 188 112 5 63 249 1 173 9.17e-16 73.6
Msa1050850 AT2G03060.3 37.143 105 57 2 1 104 1 97 9.58e-16 76.3
Msa1050850 AT2G03060.7 37.143 105 57 2 1 104 1 97 9.58e-16 76.3
Msa1050850 AT2G03060.1 37.143 105 57 2 1 104 1 97 9.58e-16 76.3
Msa1050850 AT2G03060.2 37.143 105 57 2 1 104 1 97 1.19e-15 75.9
Msa1050850 AT1G65360.1 43.421 76 42 1 1 76 6 80 4.47e-15 72.4
Msa1050850 AT1G18750.4 52.632 57 27 0 1 57 1 57 1.26e-14 72.8
Msa1050850 AT1G18750.1 52.632 57 27 0 1 57 1 57 1.42e-14 72.8
Msa1050850 AT1G18750.3 52.632 57 27 0 1 57 1 57 1.98e-14 72.4
Msa1050850 AT4G36590.1 53.333 60 28 0 2 61 7 66 6.93e-14 69.7
Msa1050850 AT5G60440.1 46.377 69 36 1 2 70 7 74 7.92e-14 70.1
Msa1050850 AT1G69540.1 30.769 156 86 5 1 156 1 134 2.53e-13 68.9
Msa1050850 AT1G69540.2 30.769 156 86 5 1 156 1 134 3.02e-13 68.9
Msa1050850 AT1G72350.1 46.377 69 34 1 2 70 43 108 3.40e-13 67.4
Msa1050850 AT2G24840.1 45.714 70 37 1 1 70 62 130 5.64e-13 67.4
Msa1050850 AT3G04100.1 43.836 73 40 1 2 74 14 85 6.37e-13 66.2
Msa1050850 AT3G66656.1 47.368 57 30 0 1 57 1 57 6.86e-13 65.5
Msa1050850 AT2G34440.1 45.614 57 31 0 1 57 1 57 1.04e-12 65.1
Msa1050850 AT1G29962.1 50.000 60 30 0 2 61 8 67 1.26e-11 62.0
Msa1050850 AT1G47760.1 45.614 57 31 0 1 57 1 57 1.76e-11 61.6
Msa1050850 AT4G37940.2 31.897 116 79 0 63 178 1 116 2.52e-11 60.8
Msa1050850 AT1G28460.1 48.333 60 31 0 2 61 8 67 6.82e-11 60.1

Find 41 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCTTTCAGTTCTGATTAT+AGG 0.166644 7_2:+16979971 Msa1050850:intron
TGATTGCCTGTAGTGATTTC+TGG 0.197665 7_2:-16979331 None:intergenic
ATTGGCTGATCTTCAAAATA+AGG 0.303924 7_2:+16978442 Msa1050850:CDS
AATAGCTACCTCAAGTTCTT+TGG 0.310821 7_2:-16976283 None:intergenic
CAGCACCATAACTGCACTTC+TGG 0.351179 7_2:-16976242 None:intergenic
TGAGCAGCTTGAACGGCAAT+TGG 0.374852 7_2:+16976832 Msa1050850:CDS
GCAATCCTACATTGCAGATT+GGG 0.382564 7_2:+16979433 Msa1050850:CDS
CTTGGGGCCACTAAGTTCTA+AGG 0.401577 7_2:+16976805 Msa1050850:CDS
ACAATTCATGCTGGACCAAT+TGG 0.407437 7_2:+16978424 Msa1050850:CDS
CAAGTGAATGGATTTGTTCC+TGG 0.418508 7_2:+16980045 Msa1050850:CDS
TCAGAGCTTCTTCCAGCAGC+TGG 0.423930 7_2:+16979407 Msa1050850:CDS
ACATTTGCAAAGAGAAGAAA+TGG 0.428741 7_2:+16974583 Msa1050850:CDS
GCATGCTCAAAACTCTTGAT+AGG 0.431018 7_2:+16976217 Msa1050850:intron
TCAAGATCCTTAGAACTTAG+TGG 0.434757 7_2:-16976812 None:intergenic
TGCAATCCTACATTGCAGAT+TGG 0.436020 7_2:+16979432 Msa1050850:CDS
GAAATCACTACAGGCAATCA+TGG 0.441544 7_2:+16979334 Msa1050850:CDS
GAGGAAGAGTTGAGTTGAAG+AGG 0.453499 7_2:+16974533 Msa1050850:CDS
ATATTGCATGCTTTGATCAC+CGG 0.459468 7_2:-16979361 None:intergenic
GGTGATCAAAGCATGCAATA+TGG 0.460751 7_2:+16979363 Msa1050850:CDS
GTTTCAGCTTCAAGTATTCA+CGG 0.476057 7_2:-16976626 None:intergenic
AGGTACCAGAAGTGCAGTTA+TGG 0.477506 7_2:+16976237 Msa1050850:CDS
TTCTGTTCTTTGTGATGCTG+AGG 0.481866 7_2:+16974630 Msa1050850:CDS
GCTACCTCAAGTTCTTTGGC+AGG 0.490765 7_2:-16976279 None:intergenic
TAGGATTGCAATCCAGCTGC+TGG 0.491957 7_2:-16979419 None:intergenic
CAAGCTCAACAACAAGTGAA+TGG 0.495301 7_2:+16980033 Msa1050850:CDS
CTCAATTATAACATCCATCC+AGG 0.498382 7_2:-16980063 None:intergenic
AAACAGATCCTTGTCAATCA+AGG 0.503683 7_2:+16978568 Msa1050850:CDS
TATTACCCAATCTGCAATGT+AGG 0.507401 7_2:-16979438 None:intergenic
CTTATCATCTTCTCTACTCG+TGG 0.542095 7_2:+16974658 Msa1050850:CDS
TCAATTCCAGAAATCACTAC+AGG 0.554040 7_2:+16979325 Msa1050850:CDS
TACAGGCAATCATGGGAAGC+CGG 0.554692 7_2:+16979342 Msa1050850:CDS
AGGATCTTGAGCAGCTTGAA+CGG 0.572971 7_2:+16976825 Msa1050850:CDS
TTTGCAGACACAATTCATGC+TGG 0.573767 7_2:+16978415 Msa1050850:intron
TTTGTTACAGGAACATATGT+TGG 0.580851 7_2:+16978538 Msa1050850:intron
TGAATGGATTTGTTCCTGGA+TGG 0.588184 7_2:+16980049 Msa1050850:CDS
AAATCACTACAGGCAATCAT+GGG 0.592196 7_2:+16979335 Msa1050850:CDS
CAAACCTGCCAAAGAACTTG+AGG 0.622488 7_2:+16976275 Msa1050850:CDS
ATTCATCTCTGAAGCATGTG+AGG 0.631937 7_2:+16976855 Msa1050850:CDS
TGTGCTTACCTTGATTGACA+AGG 0.663759 7_2:-16978576 None:intergenic
GAAGCATGTGAGGTCAACAA+AGG 0.670052 7_2:+16976865 Msa1050850:CDS
AAAATCTTCAAAGAACACAG+AGG 0.732334 7_2:+16976658 Msa1050850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATATTTATATACTTC+TGG + chr7_2:16975395-16975414 Msa1050850:intron 10.0%
!! AAATATGAAAATTTAATGTT+AGG - chr7_2:16976691-16976710 None:intergenic 10.0%
!! AAAAAAAAAGTAAAAATAAG+TGG - chr7_2:16978169-16978188 None:intergenic 10.0%
!! TAAATAAAATGTAAATCAAA+TGG - chr7_2:16978311-16978330 None:intergenic 10.0%
!! ATATATAATTTATTGAACTA+AGG - chr7_2:16979118-16979137 None:intergenic 10.0%
!!! TTATTTATTTATTTGTTATC+CGG - chr7_2:16979583-16979602 None:intergenic 10.0%
!! AAAAATCAAATCAAAATTCA+TGG - chr7_2:16974954-16974973 None:intergenic 15.0%
!! TAAGATTTAAGAAAAAAACA+AGG - chr7_2:16975199-16975218 None:intergenic 15.0%
!! TATCTATTGCAAATATTATA+AGG + chr7_2:16975642-16975661 Msa1050850:intron 15.0%
!!! GATAACTTTTAGTAAAAATA+AGG + chr7_2:16975837-16975856 Msa1050850:intron 15.0%
!!! ATGTTCTATTATTTTTCATT+TGG + chr7_2:16976575-16976594 Msa1050850:intron 15.0%
!! CCATAAAATAATTCAAATTT+AGG - chr7_2:16977352-16977371 None:intergenic 15.0%
!!! CCTAAATTTGAATTATTTTA+TGG + chr7_2:16977349-16977368 Msa1050850:intron 15.0%
!!! TTTTGTTCATTTTTTTGATA+AGG + chr7_2:16977552-16977571 Msa1050850:intron 15.0%
!!! TTTGTTCATTTTTTTGATAA+GGG + chr7_2:16977553-16977572 Msa1050850:intron 15.0%
!!! ATTTATGTATATGTATTTTG+TGG + chr7_2:16977870-16977889 Msa1050850:intron 15.0%
!!! ATTTAGCATTATTTTTGTTT+TGG + chr7_2:16977939-16977958 Msa1050850:intron 15.0%
!! TAATATATCATATATGAACA+AGG - chr7_2:16978128-16978147 None:intergenic 15.0%
!! AATACAATCTTATTATGAAT+GGG - chr7_2:16978206-16978225 None:intergenic 15.0%
!!! TGATTTTCTCAAATTATTAA+CGG - chr7_2:16978956-16978975 None:intergenic 15.0%
!!! AAATAAAAGAAACTTTTAGA+TGG + chr7_2:16979215-16979234 Msa1050850:intron 15.0%
!!! TTGGTTAATGTTTTAAAAAA+CGG + chr7_2:16979495-16979514 Msa1050850:intron 15.0%
!! AAAATAGATTGAAAAAAACA+CGG + chr7_2:16979649-16979668 Msa1050850:intron 15.0%
!! AAATCAAAACATATACATAA+AGG - chr7_2:16979944-16979963 None:intergenic 15.0%
!!! ACTGTCTTTGTTTTATTTTT+AGG + chr7_2:16975097-16975116 Msa1050850:intron 20.0%
!!! ATTAATTTCCATGTTTTCTT+TGG + chr7_2:16975244-16975263 Msa1050850:intron 20.0%
!!! AATTAAGTTGTTTATCTTTC+TGG + chr7_2:16975301-16975320 Msa1050850:intron 20.0%
!! TTAATAAATGCATTACTCTA+TGG - chr7_2:16975371-16975390 None:intergenic 20.0%
!!! AAAATTGTCTTTTGTTTATG+AGG + chr7_2:16975420-16975439 Msa1050850:intron 20.0%
!!! AAAAAAACATTTGTTTTCCA+TGG - chr7_2:16975704-16975723 None:intergenic 20.0%
!! AAAATAAGGAATATTGAAAC+TGG + chr7_2:16975851-16975870 Msa1050850:intron 20.0%
!! TTGAAGATATATTCATTTGA+TGG + chr7_2:16975981-16976000 Msa1050850:intron 20.0%
!!! ATATCAGTGTTGATTATAAA+TGG - chr7_2:16976313-16976332 None:intergenic 20.0%
!!! TAAAATGAGTGTATTTTGTA+CGG - chr7_2:16976368-16976387 None:intergenic 20.0%
!!! CTAAAAGATTTCTGAAATAT+TGG - chr7_2:16976778-16976797 None:intergenic 20.0%
!!! CAATATTTCAGAAATCTTTT+AGG + chr7_2:16976776-16976795 Msa1050850:intron 20.0%
!! TAGAACTTTCTTAATTAACA+TGG + chr7_2:16976908-16976927 Msa1050850:intron 20.0%
!!! GAATTTCATTTTCTAATCAA+AGG - chr7_2:16977168-16977187 None:intergenic 20.0%
!!! GTATAACTTCAATTTTTCTT+AGG + chr7_2:16977311-16977330 Msa1050850:intron 20.0%
!!! AGTGAAAGAATGAAATTTTT+TGG - chr7_2:16977650-16977669 None:intergenic 20.0%
!! AGTAAGGCTATTAAAAAATT+TGG - chr7_2:16977737-16977756 None:intergenic 20.0%
!!! AAGTATTTTGTCATGTATTT+AGG + chr7_2:16977768-16977787 Msa1050850:intron 20.0%
!!! TGCTTTTAATTATTTTGTCT+AGG + chr7_2:16977794-16977813 Msa1050850:intron 20.0%
!! ATGAACAAGGTTATTAAAAT+CGG - chr7_2:16978115-16978134 None:intergenic 20.0%
!! GAATACAATCTTATTATGAA+TGG - chr7_2:16978207-16978226 None:intergenic 20.0%
!! TACATCACAATAATATTCAA+GGG - chr7_2:16978359-16978378 None:intergenic 20.0%
!! AATTAATAAAGCAACTTCTT+TGG + chr7_2:16978489-16978508 Msa1050850:intron 20.0%
!! ATTAATAAAGCAACTTCTTT+GGG + chr7_2:16978490-16978509 Msa1050850:intron 20.0%
!! TGTACAAGAAATATCTATTA+TGG + chr7_2:16978873-16978892 Msa1050850:intron 20.0%
!! TTTAGTGTAATTATATGTGT+TGG + chr7_2:16978981-16979000 Msa1050850:intron 20.0%
!! TAGTCAAATATATTATCACA+AGG - chr7_2:16979282-16979301 None:intergenic 20.0%
! AAATGTTTATGTCCTTTGTA+CGG + chr7_2:16975048-16975067 Msa1050850:intron 25.0%
!!! GTCTTTGTTTTATTTTTAGG+AGG + chr7_2:16975100-16975119 Msa1050850:intron 25.0%
! TTTATAAGTCTTTCAATCCA+TGG + chr7_2:16975684-16975703 Msa1050850:intron 25.0%
! GCACAAGAATGTTATTAAAA+TGG + chr7_2:16976095-16976114 Msa1050850:intron 25.0%
! GTTATTAAAATGGCACAATA+TGG + chr7_2:16976105-16976124 Msa1050850:intron 25.0%
!!! TTTGACATTTTTTTTCTTCC+TGG + chr7_2:16976182-16976201 Msa1050850:intron 25.0%
! TCGTTCAATTTAGCATTAAA+TGG - chr7_2:16976985-16977004 None:intergenic 25.0%
! TTAACTAAATTTCGTGTAGT+CGG + chr7_2:16977268-16977287 Msa1050850:intron 25.0%
!! TCAATTTTTCTTAGGTCATT+TGG + chr7_2:16977319-16977338 Msa1050850:intron 25.0%
!!! ATGAAATTTTTTGGCCTTTA+GGG - chr7_2:16977641-16977660 None:intergenic 25.0%
!!! AATGAAATTTTTTGGCCTTT+AGG - chr7_2:16977642-16977661 None:intergenic 25.0%
! TGAACAAGGTTATTAAAATC+GGG - chr7_2:16978114-16978133 None:intergenic 25.0%
! ACATCACAATAATATTCAAG+GGG - chr7_2:16978358-16978377 None:intergenic 25.0%
! CTACATCACAATAATATTCA+AGG - chr7_2:16978360-16978379 None:intergenic 25.0%
!!! CTCATATTTGTTTTGAATTG+TGG + chr7_2:16978624-16978643 Msa1050850:intron 25.0%
!! TGCATTTTCTTGCAATATAA+AGG - chr7_2:16978668-16978687 None:intergenic 25.0%
!!! GCTGCAACATAAATTTTTTT+AGG - chr7_2:16978733-16978752 None:intergenic 25.0%
!!! TGACTATAATTTGTTTCAGT+TGG + chr7_2:16979296-16979315 Msa1050850:intron 25.0%
!!! GAAAGCAATGTTTTAAAAAC+TGG - chr7_2:16979898-16979917 None:intergenic 25.0%
! TCAAAACATATACATAAAGG+TGG - chr7_2:16979941-16979960 None:intergenic 25.0%
! ATAATCAGAACTGAAAGATA+GGG - chr7_2:16979971-16979990 None:intergenic 25.0%
! TATAATCAGAACTGAAAGAT+AGG - chr7_2:16979972-16979991 None:intergenic 25.0%
!! TATCTTTCAGTTCTGATTAT+AGG + chr7_2:16979971-16979990 Msa1050850:intron 25.0%
ACATTTGCAAAGAGAAGAAA+TGG + chr7_2:16974583-16974602 Msa1050850:CDS 30.0%
CAAGTACATGTAGATCTAAT+AGG - chr7_2:16974817-16974836 None:intergenic 30.0%
!!! TTAGGAGGTTTTTTGAGATT+AGG + chr7_2:16975115-16975134 Msa1050850:intron 30.0%
ACGCAATGTTTCAATGAAAA+AGG - chr7_2:16975146-16975165 None:intergenic 30.0%
GGGCTATTAGATAATAGATA+GGG + chr7_2:16975463-16975482 Msa1050850:intron 30.0%
TCAGTGAATTCAAGAATTCA+AGG - chr7_2:16975575-16975594 None:intergenic 30.0%
TTGAAATCTGTTGATATTGC+TGG + chr7_2:16975596-16975615 Msa1050850:intron 30.0%
TAAGGAATATTGAAACTGGT+TGG + chr7_2:16975855-16975874 Msa1050850:intron 30.0%
TATTCCGAACACATTCTATA+CGG - chr7_2:16976439-16976458 None:intergenic 30.0%
AAAATCTTCAAAGAACACAG+AGG + chr7_2:16976658-16976677 Msa1050850:CDS 30.0%
!! AAATCTTTTAGGTGAAGACT+TGG + chr7_2:16976787-16976806 Msa1050850:CDS 30.0%
!! AATCTTTTAGGTGAAGACTT+GGG + chr7_2:16976788-16976807 Msa1050850:CDS 30.0%
AGTTGTAACACTATTACCTT+AGG + chr7_2:16976940-16976959 Msa1050850:intron 30.0%
! TTTCTAATCAAAGGTGTGTT+TGG - chr7_2:16977159-16977178 None:intergenic 30.0%
TACAAAGATGACAGAATAAG+TGG - chr7_2:16977294-16977313 None:intergenic 30.0%
!! ATAGGATTTTGCCTGTTTTT+GGG - chr7_2:16977470-16977489 None:intergenic 30.0%
!! CGATTTTGTGCAATTTTGAT+AGG - chr7_2:16977488-16977507 None:intergenic 30.0%
!!! AGGATTTTGATGGATTTTGA+AGG + chr7_2:16977528-16977547 Msa1050850:intron 30.0%
! TTTAGGGTATTTATAGAACC+GGG - chr7_2:16977625-16977644 None:intergenic 30.0%
!! CTTTAGGGTATTTATAGAAC+CGG - chr7_2:16977626-16977645 None:intergenic 30.0%
CTTAATAATACACGTGAGTA+AGG - chr7_2:16977714-16977733 None:intergenic 30.0%
! GACTTTTGTAGAATCGATAT+AGG - chr7_2:16978013-16978032 None:intergenic 30.0%
ACGAGATTCAAATCATGAAT+CGG - chr7_2:16978251-16978270 None:intergenic 30.0%
TTCATGATTTGAATCTCGTT+TGG + chr7_2:16978252-16978271 Msa1050850:intron 30.0%
!! TATTTTGAAGATCAGCCAAT+TGG - chr7_2:16978442-16978461 None:intergenic 30.0%
ATTGGCTGATCTTCAAAATA+AGG + chr7_2:16978442-16978461 Msa1050850:CDS 30.0%
GATCTTCAAAATAAGGTACA+TGG + chr7_2:16978449-16978468 Msa1050850:intron 30.0%
!! TCAAGCTATTGTTTTGTTAC+AGG + chr7_2:16978526-16978545 Msa1050850:intron 30.0%
TTTGTTACAGGAACATATGT+TGG + chr7_2:16978538-16978557 Msa1050850:intron 30.0%
! CGGAATGCAATTTAAAACAA+TGG + chr7_2:16978787-16978806 Msa1050850:intron 30.0%
TCTCAAATTATTAACGGTGT+AGG - chr7_2:16978950-16978969 None:intergenic 30.0%
CTAAGACCAATTCTAAATTG+TGG - chr7_2:16979095-16979114 None:intergenic 30.0%
!! CTATAATTTGTTTCAGTTGG+AGG + chr7_2:16979299-16979318 Msa1050850:intron 30.0%
CCAATAAATTATTACGCAAG+AGG - chr7_2:16979479-16979498 None:intergenic 30.0%
CCTCTTGCGTAATAATTTAT+TGG + chr7_2:16979476-16979495 Msa1050850:intron 30.0%
! AAGTTGATTACAGGTTAAAC+CGG - chr7_2:16979680-16979699 None:intergenic 30.0%
GTTTAACCTGTAATCAACTT+TGG + chr7_2:16979680-16979699 Msa1050850:intron 30.0%
! ATTGAACCAAAGTTGATTAC+AGG - chr7_2:16979689-16979708 None:intergenic 30.0%
CAACCTGACTACATTATAAT+TGG + chr7_2:16979715-16979734 Msa1050850:intron 30.0%
GATCCAATTATAATGTAGTC+AGG - chr7_2:16979721-16979740 None:intergenic 30.0%
TGGAAATAAGTCGAATTCAA+AGG - chr7_2:16979846-16979865 None:intergenic 30.0%
AACGATTTAATTGGTTGAAC+TGG - chr7_2:16979866-16979885 None:intergenic 30.0%
ACTGAACTGAACGATTTAAT+TGG - chr7_2:16979875-16979894 None:intergenic 30.0%
!!! TCCTTTGTACGGTTACTTTT+TGG + chr7_2:16975059-16975078 Msa1050850:intron 35.0%
ACCAAAAAGTAACCGTACAA+AGG - chr7_2:16975063-16975082 None:intergenic 35.0%
!! TTTTCTTTGGAAGCTTGGTT+AGG + chr7_2:16975257-16975276 Msa1050850:intron 35.0%
! ATGAGGAACTTTTTGCAGAA+AGG + chr7_2:16975437-16975456 Msa1050850:intron 35.0%
! GAACTTTTTGCAGAAAGGAA+GGG + chr7_2:16975442-16975461 Msa1050850:intron 35.0%
! AACTTTTTGCAGAAAGGAAG+GGG + chr7_2:16975443-16975462 Msa1050850:intron 35.0%
GGGGCTATTAGATAATAGAT+AGG + chr7_2:16975462-16975481 Msa1050850:intron 35.0%
AATAGCTACCTCAAGTTCTT+TGG - chr7_2:16976286-16976305 None:intergenic 35.0%
! AGTGTATTTTGTACGGTGTT+GGG - chr7_2:16976361-16976380 None:intergenic 35.0%
!! TACACTCATTTTAGTGCGTT+TGG + chr7_2:16976375-16976394 Msa1050850:intron 35.0%
GAAACCGTATAGAATGTGTT+CGG + chr7_2:16976432-16976451 Msa1050850:intron 35.0%
GTTTCAGCTTCAAGTATTCA+CGG - chr7_2:16976629-16976648 None:intergenic 35.0%
!! ATCTTTTAGGTGAAGACTTG+GGG + chr7_2:16976789-16976808 Msa1050850:CDS 35.0%
TCAAGATCCTTAGAACTTAG+TGG - chr7_2:16976815-16976834 None:intergenic 35.0%
TACGACTCATATGTAACCTA+AGG - chr7_2:16976959-16976978 None:intergenic 35.0%
! TGTTTGGTTTCAACATGTGT+CGG - chr7_2:16977143-16977162 None:intergenic 35.0%
ATGAATCTCTAGTGTGTATC+TGG + chr7_2:16977190-16977209 Msa1050850:intron 35.0%
!!! AGGATTTTAGGACTTAAGTC+GGG - chr7_2:16977398-16977417 None:intergenic 35.0%
!!! CAGGATTTTAGGACTTAAGT+CGG - chr7_2:16977399-16977418 None:intergenic 35.0%
! GATAGGATTTTGCCTGTTTT+TGG - chr7_2:16977471-16977490 None:intergenic 35.0%
! CAAAATCCTGCGATTTTGAA+CGG - chr7_2:16977517-16977536 None:intergenic 35.0%
! TCAAAATCGCAGGATTTTGA+TGG + chr7_2:16977518-16977537 Msa1050850:intron 35.0%
CGGTTCTATAAATACCCTAA+AGG + chr7_2:16977624-16977643 Msa1050850:intron 35.0%
TACTTGATCACATGTGAGTA+AGG - chr7_2:16977753-16977772 None:intergenic 35.0%
!!! AGAATCCTCGATTTTGATTG+CGG + chr7_2:16977963-16977982 Msa1050850:intron 35.0%
TAAAACCGCAATCAAAATCG+AGG - chr7_2:16977971-16977990 None:intergenic 35.0%
TCGATATAGGATAGCAAAGT+CGG - chr7_2:16978000-16978019 None:intergenic 35.0%
! AAATCGAAGGATTTTACTCG+AGG - chr7_2:16978035-16978054 None:intergenic 35.0%
AAAATCGCAGTCAAAATCGA+AGG - chr7_2:16978048-16978067 None:intergenic 35.0%
GACTTTACTTCAAGTCGAAA+GGG - chr7_2:16978092-16978111 None:intergenic 35.0%
TAAGAAACTACATTGAGCAG+TGG - chr7_2:16978288-16978307 None:intergenic 35.0%
ACAATAATATTCAAGGGGAG+AGG - chr7_2:16978353-16978372 None:intergenic 35.0%
AAACAGATCCTTGTCAATCA+AGG + chr7_2:16978568-16978587 Msa1050850:CDS 35.0%
GAGATGACTATCATGTATAC+TGG - chr7_2:16978607-16978626 None:intergenic 35.0%
! CCTAATCTTCTTCTAGCTAT+GGG - chr7_2:16978818-16978837 None:intergenic 35.0%
! ACCTAATCTTCTTCTAGCTA+TGG - chr7_2:16978819-16978838 None:intergenic 35.0%
GTATGATGGTTTATGAAGCA+CGG - chr7_2:16979048-16979067 None:intergenic 35.0%
! TACGGACCACAATTTAGAAT+TGG + chr7_2:16979086-16979105 Msa1050850:intron 35.0%
TCAATTCCAGAAATCACTAC+AGG + chr7_2:16979325-16979344 Msa1050850:CDS 35.0%
AAATCACTACAGGCAATCAT+GGG + chr7_2:16979335-16979354 Msa1050850:CDS 35.0%
ATATTGCATGCTTTGATCAC+CGG - chr7_2:16979364-16979383 None:intergenic 35.0%
TATTACCCAATCTGCAATGT+AGG - chr7_2:16979441-16979460 None:intergenic 35.0%
GCATTAAACCAATAACCTAG+AGG - chr7_2:16979543-16979562 None:intergenic 35.0%
GCATTTAACCAAAGTTGAAC+CGG + chr7_2:16979561-16979580 Msa1050850:intron 35.0%
! TTTGTTATCCGGTTCAACTT+TGG - chr7_2:16979572-16979591 None:intergenic 35.0%
TGAAAAAAACACGGTTGAAC+CGG + chr7_2:16979658-16979677 Msa1050850:intron 35.0%
! AGAGTCTTATCTATCTGATG+TGG + chr7_2:16979746-16979765 Msa1050850:intron 35.0%
! GAGTCTTATCTATCTGATGT+GGG + chr7_2:16979747-16979766 Msa1050850:intron 35.0%
TTCTGTTCTTTGTGATGCTG+AGG + chr7_2:16974630-16974649 Msa1050850:CDS 40.0%
CTTATCATCTTCTCTACTCG+TGG + chr7_2:16974658-16974677 Msa1050850:CDS 40.0%
CCAAGCTTCCAAAGAAAACA+TGG - chr7_2:16975255-16975274 None:intergenic 40.0%
!! CCATGTTTTCTTTGGAAGCT+TGG + chr7_2:16975252-16975271 Msa1050850:intron 40.0%
TGCATTACTCTATGGTTCAG+AGG - chr7_2:16975363-16975382 None:intergenic 40.0%
! GGAACTTTTTGCAGAAAGGA+AGG + chr7_2:16975441-16975460 Msa1050850:intron 40.0%
GATATTGCTGGAAATTGTGC+TGG + chr7_2:16975608-16975627 Msa1050850:intron 40.0%
GCATGCTCAAAACTCTTGAT+AGG + chr7_2:16976217-16976236 Msa1050850:intron 40.0%
!! GTGTATTTTGTACGGTGTTG+GGG - chr7_2:16976360-16976379 None:intergenic 40.0%
! GAGTGTATTTTGTACGGTGT+TGG - chr7_2:16976362-16976381 None:intergenic 40.0%
!! ATTCATCTCTGAAGCATGTG+AGG + chr7_2:16976855-16976874 Msa1050850:CDS 40.0%
CACATGTGTCTGTATCATGT+TGG + chr7_2:16977108-16977127 Msa1050850:intron 40.0%
CGACTTAAGTCCTAAAATCC+TGG + chr7_2:16977397-16977416 Msa1050850:intron 40.0%
! GTCGCAAAAACCAGGATTTT+AGG - chr7_2:16977410-16977429 None:intergenic 40.0%
!!! CTGTTTTTGGGACTTTGCTA+TGG - chr7_2:16977458-16977477 None:intergenic 40.0%
CATAGCAAAGTCCCAAAAAC+AGG + chr7_2:16977456-16977475 Msa1050850:intron 40.0%
TGAAATCCGTTCAAAATCGC+AGG + chr7_2:16977508-16977527 Msa1050850:intron 40.0%
ACCGGGTCATAGATTCAAAT+CGG - chr7_2:16977608-16977627 None:intergenic 40.0%
ACATACTTGATCACAAGCGT+GGG - chr7_2:16977676-16977695 None:intergenic 40.0%
TACATACTTGATCACAAGCG+TGG - chr7_2:16977677-16977696 None:intergenic 40.0%
CGATATAGGATAGCAAAGTC+GGG - chr7_2:16977999-16978018 None:intergenic 40.0%
! TCGAAAGGGTGTAGCAAAAT+CGG - chr7_2:16978078-16978097 None:intergenic 40.0%
GGACTTTACTTCAAGTCGAA+AGG - chr7_2:16978093-16978112 None:intergenic 40.0%
TTATTGTGATGTAGTCCTGC+TGG + chr7_2:16978366-16978385 Msa1050850:intron 40.0%
AACAGTTCAATGTAACCAGC+AGG - chr7_2:16978384-16978403 None:intergenic 40.0%
TTTGCAGACACAATTCATGC+TGG + chr7_2:16978415-16978434 Msa1050850:intron 40.0%
ACAATTCATGCTGGACCAAT+TGG + chr7_2:16978424-16978443 Msa1050850:CDS 40.0%
TGTGCTTACCTTGATTGACA+AGG - chr7_2:16978579-16978598 None:intergenic 40.0%
TTGTGGCTGTTGTTATGCTA+CGG + chr7_2:16978641-16978660 Msa1050850:intron 40.0%
CCCATAGCTAGAAGAAGATT+AGG + chr7_2:16978815-16978834 Msa1050850:intron 40.0%
CAATTACGGTTGCTGTATGA+TGG - chr7_2:16979062-16979081 None:intergenic 40.0%
AGCAACCGTAATTGCAGTTA+CGG + chr7_2:16979068-16979087 Msa1050850:intron 40.0%
TGATTGCCTGTAGTGATTTC+TGG - chr7_2:16979334-16979353 None:intergenic 40.0%
GAAATCACTACAGGCAATCA+TGG + chr7_2:16979334-16979353 Msa1050850:CDS 40.0%
GGTGATCAAAGCATGCAATA+TGG + chr7_2:16979363-16979382 Msa1050850:CDS 40.0%
TGCAATCCTACATTGCAGAT+TGG + chr7_2:16979432-16979451 Msa1050850:CDS 40.0%
GCAATCCTACATTGCAGATT+GGG + chr7_2:16979433-16979452 Msa1050850:CDS 40.0%
GAGTGATACCTCTAGGTTAT+TGG + chr7_2:16979532-16979551 Msa1050850:intron 40.0%
TATCTATCTGATGTGGGACA+TGG + chr7_2:16979753-16979772 Msa1050850:intron 40.0%
ATCTATCTGATGTGGGACAT+GGG + chr7_2:16979754-16979773 Msa1050850:intron 40.0%
CAAGCTCAACAACAAGTGAA+TGG + chr7_2:16980033-16980052 Msa1050850:CDS 40.0%
! CAAGTGAATGGATTTGTTCC+TGG + chr7_2:16980045-16980064 Msa1050850:CDS 40.0%
! TGAATGGATTTGTTCCTGGA+TGG + chr7_2:16980049-16980068 Msa1050850:CDS 40.0%
!! GAGGAAGAGTTGAGTTGAAG+AGG + chr7_2:16974533-16974552 Msa1050850:CDS 45.0%
CTTGGTTAGGTGACTCTTGA+TGG + chr7_2:16975270-16975289 Msa1050850:intron 45.0%
!! GCATGCTGTTTCAACAAACC+AGG - chr7_2:16976203-16976222 None:intergenic 45.0%
! AGGTACCAGAAGTGCAGTTA+TGG + chr7_2:16976237-16976256 Msa1050850:CDS 45.0%
CAAACCTGCCAAAGAACTTG+AGG + chr7_2:16976275-16976294 Msa1050850:CDS 45.0%
AGGATCTTGAGCAGCTTGAA+CGG + chr7_2:16976825-16976844 Msa1050850:CDS 45.0%
GAAGCATGTGAGGTCAACAA+AGG + chr7_2:16976865-16976884 Msa1050850:CDS 45.0%
TACGCAAAGTCGCAAAAACC+AGG - chr7_2:16977418-16977437 None:intergenic 45.0%
CCGGGTCATAGATTCAAATC+GGG - chr7_2:16977607-16977626 None:intergenic 45.0%
! CCCGATTTGAATCTATGACC+CGG + chr7_2:16977604-16977623 Msa1050850:intron 45.0%
ATACTTGATCACAAGCGTGG+GGG - chr7_2:16977674-16977693 None:intergenic 45.0%
CATACTTGATCACAAGCGTG+GGG - chr7_2:16977675-16977694 None:intergenic 45.0%
! CGAAAGGGTGTAGCAAAATC+GGG - chr7_2:16978077-16978096 None:intergenic 45.0%
AGTCGATGCAGATGAAATCG+CGG + chr7_2:16978687-16978706 Msa1050850:intron 45.0%
TGGTTGTGGTAGCAATCACA+CGG + chr7_2:16978761-16978780 Msa1050850:intron 45.0%
!! ATATGTGTTGGTGTCGTGTC+CGG + chr7_2:16978993-16979012 Msa1050850:intron 45.0%
TATGAAGCACGGACACTACT+CGG - chr7_2:16979037-16979056 None:intergenic 45.0%
GTGGTCCGTAACTGCAATTA+CGG - chr7_2:16979076-16979095 None:intergenic 45.0%
CAGCACCATAACTGCACTTC+TGG - chr7_2:16976245-16976264 None:intergenic 50.0%
GCTACCTCAAGTTCTTTGGC+AGG - chr7_2:16976282-16976301 None:intergenic 50.0%
CTTGGGGCCACTAAGTTCTA+AGG + chr7_2:16976805-16976824 Msa1050850:CDS 50.0%
TGAGCAGCTTGAACGGCAAT+TGG + chr7_2:16976832-16976851 Msa1050850:CDS 50.0%
AGGGGAGAGGCTATTGCATA+AGG - chr7_2:16978340-16978359 None:intergenic 50.0%
TTATGTTGCAGCCGCAGTTG+TGG + chr7_2:16978741-16978760 Msa1050850:intron 50.0%
TGCTACCACAACCACAACTG+CGG - chr7_2:16978755-16978774 None:intergenic 50.0%
TGGTAGCAATCACACGGTTG+CGG + chr7_2:16978767-16978786 Msa1050850:intron 50.0%
TACAGGCAATCATGGGAAGC+CGG + chr7_2:16979342-16979361 Msa1050850:CDS 50.0%
TAGGATTGCAATCCAGCTGC+TGG - chr7_2:16979422-16979441 None:intergenic 50.0%
TACTCGGACAAGGTGTGTCC+CGG - chr7_2:16979021-16979040 None:intergenic 55.0%
TCAGAGCTTCTTCCAGCAGC+TGG + chr7_2:16979407-16979426 Msa1050850:CDS 55.0%
! GACGTGAGGGGAGGTGTATT+GGG - chr7_2:16979785-16979804 None:intergenic 55.0%
!! CAAAGAGTGCTGGACGTGAG+GGG - chr7_2:16979797-16979816 None:intergenic 55.0%
!! CCAAAGAGTGCTGGACGTGA+GGG - chr7_2:16979798-16979817 None:intergenic 55.0%
CCTCACGTCCAGCACTCTTT+GGG + chr7_2:16979796-16979815 Msa1050850:intron 55.0%
!! GGCTTGGTGCGTGAATCAGT+AGG + chr7_2:16979817-16979836 Msa1050850:intron 55.0%
TGCAGCCGCAGTTGTGGTTG+TGG + chr7_2:16978747-16978766 Msa1050850:intron 60.0%
GCACGGACACTACTCGGACA+AGG - chr7_2:16979031-16979050 None:intergenic 60.0%
! GGACGTGAGGGGAGGTGTAT+TGG - chr7_2:16979786-16979805 None:intergenic 60.0%
CCCTCACGTCCAGCACTCTT+TGG + chr7_2:16979795-16979814 Msa1050850:intron 60.0%
!! CCCAAAGAGTGCTGGACGTG+AGG - chr7_2:16979799-16979818 None:intergenic 60.0%
CGTCCAGCACTCTTTGGGCT+TGG + chr7_2:16979801-16979820 Msa1050850:intron 60.0%
! GCACCAAGCCCAAAGAGTGC+TGG - chr7_2:16979807-16979826 None:intergenic 60.0%
!! GTTGGTGTCGTGTCCGGCAC+CGG + chr7_2:16978999-16979018 Msa1050850:intron 65.0%
!! TTGGTGTCGTGTCCGGCACC+GGG + chr7_2:16979000-16979019 Msa1050850:intron 65.0%
GACAAGGTGTGTCCCGGTGC+CGG - chr7_2:16979015-16979034 None:intergenic 65.0%
!! AGAGTGCTGGACGTGAGGGG+AGG - chr7_2:16979794-16979813 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 16974526 16980080 16974526 ID=Msa1050850;Name=Msa1050850
chr7_2 mRNA 16974526 16980080 16974526 ID=Msa1050850-mRNA-1;Parent=Msa1050850;Name=Msa1050850-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|8|0|249
chr7_2 exon 16974526 16974710 16974526 ID=Msa1050850-mRNA-1:exon:3783;Parent=Msa1050850-mRNA-1
chr7_2 exon 16976218 16976296 16976218 ID=Msa1050850-mRNA-1:exon:3784;Parent=Msa1050850-mRNA-1
chr7_2 exon 16976618 16976679 16976618 ID=Msa1050850-mRNA-1:exon:3785;Parent=Msa1050850-mRNA-1
chr7_2 exon 16976787 16976886 16976787 ID=Msa1050850-mRNA-1:exon:3786;Parent=Msa1050850-mRNA-1
chr7_2 exon 16978422 16978463 16978422 ID=Msa1050850-mRNA-1:exon:3787;Parent=Msa1050850-mRNA-1
chr7_2 exon 16978548 16978589 16978548 ID=Msa1050850-mRNA-1:exon:3788;Parent=Msa1050850-mRNA-1
chr7_2 exon 16979315 16979454 16979315 ID=Msa1050850-mRNA-1:exon:3789;Parent=Msa1050850-mRNA-1
chr7_2 exon 16979981 16980080 16979981 ID=Msa1050850-mRNA-1:exon:3790;Parent=Msa1050850-mRNA-1
chr7_2 CDS 16974526 16974710 16974526 ID=Msa1050850-mRNA-1:cds;Parent=Msa1050850-mRNA-1
chr7_2 CDS 16976218 16976296 16976218 ID=Msa1050850-mRNA-1:cds;Parent=Msa1050850-mRNA-1
chr7_2 CDS 16976618 16976679 16976618 ID=Msa1050850-mRNA-1:cds;Parent=Msa1050850-mRNA-1
chr7_2 CDS 16976787 16976886 16976787 ID=Msa1050850-mRNA-1:cds;Parent=Msa1050850-mRNA-1
chr7_2 CDS 16978422 16978463 16978422 ID=Msa1050850-mRNA-1:cds;Parent=Msa1050850-mRNA-1
chr7_2 CDS 16978548 16978589 16978548 ID=Msa1050850-mRNA-1:cds;Parent=Msa1050850-mRNA-1
chr7_2 CDS 16979315 16979454 16979315 ID=Msa1050850-mRNA-1:cds;Parent=Msa1050850-mRNA-1
chr7_2 CDS 16979981 16980080 16979981 ID=Msa1050850-mRNA-1:cds;Parent=Msa1050850-mRNA-1
Gene Sequence

>Msa1050850

ATGGGAAGAGGAAGAGTTGAGTTGAAGAGGATAGAGAACAAGATAAACAGACAAGTTACATTTGCAAAGAGAAGAAATGGTCTTCTTAAGAAAGCTTATGAACTTTCTGTTCTTTGTGATGCTGAGGTTGCTCTTATCATCTTCTCTACTCGTGGAAAGCTTTATGAATTTTGTAGCACATCTAACATGCTCAAAACTCTTGATAGGTACCAGAAGTGCAGTTATGGTGCTGTAGAAGTTAGCAAACCTGCCAAAGAACTTGAGAGCAGCTACCGTGAATACTTGAAGCTGAAACAAAGATTTGAAAATCTTCAAAGAACACAGAGAAATCTTTTAGGTGAAGACTTGGGGCCACTAAGTTCTAAGGATCTTGAGCAGCTTGAACGGCAATTGGATTCATCTCTGAAGCATGTGAGGTCAACAAAGACACAATTCATGCTGGACCAATTGGCTGATCTTCAAAATAAGGAACATATGTTGGTTGAAGCAAACAGATCCTTGTCAATCAAGTTGGAGGAAATCAATTCCAGAAATCACTACAGGCAATCATGGGAAGCCGGTGATCAAAGCATGCAATATGGTGATCAGCAGAATGCTCACTCTCAGAGCTTCTTCCAGCAGCTGGATTGCAATCCTACATTGCAGATTGGTTCTGATTATAGGTACAACAATGTAGCTTCAGATCAGATAGCTTCAACAAGTCAAGCTCAACAACAAGTGAATGGATTTGTTCCTGGATGGATGTTATAA
Protein sequence

>Msa1050850

MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCSTSNMLKTLDRYQKCSYGAVEVSKPAKELESSYREYLKLKQRFENLQRTQRNLLGEDLGPLSSKDLEQLERQLDSSLKHVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEEINSRNHYRQSWEAGDQSMQYGDQQNAHSQSFFQQLDCNPTLQIGSDYRYNNVASDQIASTSQAQQQVNGFVPGWML*