AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1053420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1053420 MtrunA17_Chr7g0223311 89.529 382 30 4 1 381 1 373 0.0 630
Msa1053420 MtrunA17_Chr4g0010151 37.158 366 186 11 1 354 1 334 6.99e-52 177
Msa1053420 MtrunA17_Chr4g0031411 38.978 313 133 12 1 298 1 270 5.89e-46 160
Msa1053420 MtrunA17_Chr2g0328021 40.071 282 97 11 1 281 1 211 1.07e-42 150
Msa1053420 MtrunA17_Chr7g0237921 33.862 378 194 12 1 369 1 331 1.12e-41 149
Msa1053420 MtrunA17_Chr8g0374251 74.603 63 16 0 78 140 69 131 2.09e-30 119
Msa1053420 MtrunA17_Chr8g0367161 51.429 105 37 2 51 151 16 110 4.39e-30 118
Msa1053420 MtrunA17_Chr8g0341671 66.667 75 24 1 59 132 1 75 7.31e-29 112
Msa1053420 MtrunA17_Chr8g0374111 75.410 61 15 0 79 139 31 91 7.70e-29 112
Msa1053420 MtrunA17_Chr3g0127201 62.353 85 27 1 47 131 2 81 8.17e-29 113
Msa1053420 MtrunA17_Chr2g0282441 73.134 67 17 1 62 128 11 76 1.03e-28 114
Msa1053420 MtrunA17_Chr5g0411951 88.000 50 6 0 78 127 44 93 1.95e-28 113
Msa1053420 MtrunA17_Chr4g0061761 86.538 52 7 0 76 127 39 90 2.27e-28 113
Msa1053420 MtrunA17_Chr3g0126201 47.934 121 47 3 76 196 50 154 2.27e-28 113
Msa1053420 MtrunA17_Chr3g0117601 55.319 94 26 3 34 127 34 111 2.34e-28 113
Msa1053420 MtrunA17_Chr4g0030051 83.333 54 9 0 76 129 40 93 6.11e-28 111
Msa1053420 MtrunA17_Chr1g0188851 60.274 73 29 0 61 133 27 99 3.12e-27 109
Msa1053420 MtrunA17_Chr8g0346551 83.019 53 9 0 79 131 26 78 5.59e-27 108
Msa1053420 MtrunA17_Chr2g0326001 78.571 56 12 0 76 131 39 94 5.77e-27 108
Msa1053420 MtrunA17_Chr2g0308011 88.000 50 6 0 76 125 36 85 8.99e-27 106
Msa1053420 MtrunA17_Chr1g0177251 77.586 58 10 1 79 136 14 68 2.01e-26 107
Msa1053420 MtrunA17_Chr2g0282511 86.000 50 7 0 76 125 44 93 2.02e-26 107
Msa1053420 MtrunA17_Chr2g0282051 69.697 66 18 1 69 134 38 101 6.35e-26 105
Msa1053420 MtrunA17_Chr4g0047761 73.770 61 14 1 74 134 69 127 4.66e-25 103
Msa1053420 MtrunA17_Chr6g0453321 76.471 51 12 0 79 129 138 188 1.61e-23 102
Msa1053420 MtrunA17_Chr2g0283811 76.000 50 12 0 79 128 49 98 1.93e-23 95.5
Msa1053420 MtrunA17_Chr4g0042481 46.429 112 45 3 79 186 124 224 4.90e-23 100
Msa1053420 MtrunA17_Chr8g0355261 69.811 53 16 0 79 131 120 172 1.23e-22 99.0
Msa1053420 MtrunA17_Chr7g0217581 74.510 51 13 0 79 129 234 284 1.33e-22 99.8
Msa1053420 MtrunA17_Chr3g0092111 53.659 82 27 2 79 160 138 208 1.38e-22 99.0
Msa1053420 MtrunA17_Chr5g0417571 41.176 119 62 1 79 197 140 250 4.49e-22 95.5
Msa1053420 MtrunA17_Chr6g0460721 71.154 52 15 0 78 129 90 141 5.31e-22 95.5
Msa1053420 MtrunA17_Chr7g0254161 70.370 54 15 1 78 131 102 154 1.16e-21 95.9
Msa1053420 MtrunA17_Chr5g0417601 68.966 58 17 1 79 136 142 198 1.47e-21 95.1
Msa1053420 MtrunA17_Chr5g0417561 39.669 121 61 3 79 197 121 231 1.68e-21 94.7
Msa1053420 MtrunA17_Chr5g0417551 42.500 120 59 3 79 197 129 239 3.02e-21 94.0
Msa1053420 MtrunA17_Chr6g0460731 67.308 52 17 0 78 129 97 148 3.19e-21 94.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1053420 AT3G55370.2 37.465 355 145 19 1 332 1 301 1.75e-39 144
Msa1053420 AT3G55370.1 40.070 287 115 14 1 281 1 236 1.50e-38 140
Msa1053420 AT2G37590.1 48.980 147 59 3 1 133 1 145 5.41e-36 134
Msa1053420 AT1G07640.2 70.732 82 22 1 53 134 55 134 6.39e-34 129
Msa1053420 AT3G55370.3 39.474 266 109 12 17 281 67 281 7.55e-34 129
Msa1053420 AT1G07640.3 70.732 82 22 1 53 134 63 142 7.73e-34 129
Msa1053420 AT1G07640.1 72.727 77 19 1 58 134 4 78 7.93e-34 127
Msa1053420 AT2G28810.1 46.711 152 50 6 1 128 1 145 1.77e-32 125
Msa1053420 AT5G02460.1 70.130 77 21 1 55 131 75 149 2.47e-32 125
Msa1053420 AT2G28810.2 75.000 68 16 1 61 128 62 128 3.53e-31 121
Msa1053420 AT1G51700.1 85.455 55 8 0 78 132 34 88 1.50e-30 116
Msa1053420 AT5G60850.1 64.835 91 24 4 67 150 38 127 7.31e-30 117
Msa1053420 AT5G60200.1 38.596 171 85 4 76 244 54 206 7.70e-30 115
Msa1053420 AT5G65590.1 81.667 60 11 0 78 137 42 101 7.79e-30 117
Msa1053420 AT1G21340.1 56.322 87 37 1 49 134 9 95 9.42e-30 115
Msa1053420 AT2G28510.1 83.929 56 9 0 76 131 47 102 2.16e-29 115
Msa1053420 AT3G21270.1 83.929 56 9 0 78 133 30 85 3.35e-29 112
Msa1053420 AT5G62940.1 88.235 51 6 0 77 127 73 123 5.24e-28 113
Msa1053420 AT5G66940.1 53.535 99 37 1 79 168 34 132 5.25e-28 110
Msa1053420 AT4G38000.1 71.212 66 19 0 78 143 42 107 5.93e-28 110
Msa1053420 AT3G45610.1 45.370 108 51 1 39 146 10 109 9.08e-28 110
Msa1053420 AT3G50410.1 76.786 56 13 0 79 134 32 87 3.93e-27 108
Msa1053420 AT1G28310.1 75.439 57 14 0 78 134 28 84 4.92e-27 109
Msa1053420 AT1G28310.2 75.439 57 14 0 78 134 52 108 6.67e-27 109
Msa1053420 AT3G52440.1 67.742 62 20 0 72 133 20 81 3.30e-26 105
Msa1053420 AT3G52440.2 68.852 61 19 0 73 133 40 100 5.13e-26 105
Msa1053420 AT4G00940.1 60.274 73 29 0 59 131 50 122 1.31e-25 105
Msa1053420 AT4G00940.3 60.274 73 29 0 59 131 50 122 1.31e-25 105
Msa1053420 AT4G00940.2 60.274 73 29 0 59 131 50 122 1.31e-25 105
Msa1053420 AT4G21050.1 61.644 73 27 1 76 148 23 94 4.21e-25 102
Msa1053420 AT3G61850.2 77.358 53 12 0 79 131 64 116 5.38e-25 103
Msa1053420 AT3G61850.3 77.358 53 12 0 79 131 64 116 5.38e-25 103
Msa1053420 AT4G24060.1 75.000 56 14 0 76 131 52 107 5.91e-25 104
Msa1053420 AT3G61850.1 77.358 53 12 0 79 131 76 128 6.06e-25 103
Msa1053420 AT3G61850.5 77.358 53 12 0 79 131 64 116 7.38e-25 103
Msa1053420 AT3G61850.4 77.358 53 12 0 79 131 76 128 8.13e-25 103
Msa1053420 AT5G62430.1 37.226 137 83 2 58 192 36 171 3.60e-23 98.6
Msa1053420 AT1G47655.1 75.000 52 13 0 74 125 26 77 3.61e-23 96.7
Msa1053420 AT2G46590.1 84.783 46 7 0 79 124 70 115 4.63e-23 99.4
Msa1053420 AT2G46590.2 84.783 46 7 0 79 124 82 127 5.26e-23 99.4
Msa1053420 AT3G47500.1 74.510 51 13 0 79 129 112 162 6.27e-23 100
Msa1053420 AT1G29160.1 75.472 53 12 1 79 131 64 115 7.16e-23 94.7
Msa1053420 AT2G34140.1 75.472 53 12 1 79 131 60 111 8.05e-23 94.4
Msa1053420 AT1G64620.1 76.471 51 12 0 76 126 48 98 1.14e-22 98.2
Msa1053420 AT1G69570.1 60.000 75 18 2 79 153 134 196 1.34e-22 98.6
Msa1053420 AT5G39660.3 73.077 52 14 0 79 130 140 191 5.86e-22 97.4
Msa1053420 AT5G39660.1 73.077 52 14 0 79 130 140 191 5.86e-22 97.4
Msa1053420 AT5G39660.2 73.077 52 14 0 79 130 140 191 5.86e-22 97.4
Msa1053420 AT4G21040.1 64.516 62 22 0 79 140 27 88 1.13e-21 93.2
Msa1053420 AT1G26790.1 70.588 51 15 0 79 129 113 163 1.53e-21 95.5
Msa1053420 AT4G21080.1 62.903 62 23 0 79 140 27 88 6.43e-21 91.3
Msa1053420 AT4G21030.1 57.692 52 22 0 79 130 23 74 2.76e-14 71.2

Find 104 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAACTTGTCGTCGTTAT+TGG 0.174969 7_2:+22950217 Msa1053420:CDS
GAAATAGTAATGATCTATTT+TGG 0.191335 7_2:+22950943 Msa1053420:CDS
CTAAACTTTGTATTTCTAAA+TGG 0.208729 7_2:+22951230 Msa1053420:three_prime_UTR
CAAATTGGATTATTTCAATT+TGG 0.211059 7_2:+22950759 Msa1053420:CDS
AGTAATTTGCAACCACAAAT+TGG 0.232158 7_2:+22950744 Msa1053420:CDS
ATCCTCAAATCTAGTGCTTT+TGG 0.236518 7_2:+22951039 Msa1053420:exon
GCAAATTCTTCTTCTAATAA+TGG 0.245095 7_2:+22950417 Msa1053420:CDS
GTGCTGCTGCAGCATCATTT+TGG 0.253706 7_2:-22950113 None:intergenic
ATATGCTGCTCCATTAATTA+AGG 0.286585 7_2:-22951064 None:intergenic
ATTAGTTCACTTGCTAACTA+TGG 0.312768 7_2:+22951139 Msa1053420:three_prime_UTR
CAAGGTGGTGAAGTGAAATT+AGG 0.320582 7_2:-22951014 None:intergenic
TGAGGGCATTGGTTCTTTGT+TGG 0.338435 7_2:+22950539 Msa1053420:CDS
CAATTTGGTGGAGAAAATAA+TGG 0.350809 7_2:+22950774 Msa1053420:CDS
GTCGGTGCTGGTGCTGGTGC+TGG 0.357439 7_2:+22950363 Msa1053420:CDS
CTCCAGGTCGGTGCTGGTGC+TGG 0.360077 7_2:+22950357 Msa1053420:CDS
TATAATCAGCAAGGAGGAAT+TGG 0.362226 7_2:+22949952 Msa1053420:intron
CAAGGTATAATTAGAGTGTT+AGG 0.368380 7_2:+22951113 Msa1053420:three_prime_UTR
TGATGAACTTGTAGCGAATT+CGG 0.372887 7_2:-22950693 None:intergenic
AAGAAATTTGTTTCGGTCGA+AGG 0.385929 7_2:+22950806 Msa1053420:CDS
GACCGAAACAAATTTCTTTG+CGG 0.388659 7_2:-22950801 None:intergenic
AATTGAAATAATCCAATTTG+TGG 0.391831 7_2:-22950756 None:intergenic
CTGTTGGAGGTGGTTGTAGA+AGG 0.393447 7_2:+22950268 Msa1053420:CDS
TCTTCAATTGGTAATGGTAA+TGG 0.395518 7_2:+22950624 Msa1053420:CDS
GGTAGTGGTTCTTCTTCAAT+TGG 0.396092 7_2:+22950612 Msa1053420:CDS
CATTGTTCACCAATGCCATT+TGG 0.402281 7_2:-22950663 None:intergenic
GCTGGTGCTGGTGTTGCTGC+TGG 0.404302 7_2:+22950375 Msa1053420:CDS
AGCCGCAAAGAAATTTGTTT+CGG 0.415046 7_2:+22950799 Msa1053420:CDS
AGGAACAATAAAAGAAGAAA+AGG 0.418330 7_2:+22950288 Msa1053420:CDS
GTGTTTGTTGATTCACATCT+TGG 0.421696 7_2:-22950144 None:intergenic
TAAAAGAAGAAAAGGAAATT+CGG 0.424897 7_2:+22950296 Msa1053420:CDS
GGTTCTTCTTCAATTGGTAA+TGG 0.429389 7_2:+22950618 Msa1053420:CDS
TTGGGTGGATCTAGATAGAT+TGG 0.437111 7_2:-22949622 None:intergenic
TCTATCTAGATCCACCCAAC+TGG 0.440222 7_2:+22949626 Msa1053420:CDS
ATTGGATTATTTCAATTTGG+TGG 0.443223 7_2:+22950762 Msa1053420:CDS
TATTCTTCAAGTGTTAGTAT+TGG 0.447776 7_2:+22950834 Msa1053420:CDS
TAACACACACATATAGCTAA+TGG 0.455892 7_2:-22951179 None:intergenic
TCAAGTTAATACAGTTAAAG+TGG 0.456282 7_2:+22950866 Msa1053420:CDS
GGTTGCAAATTACTCAAGAA+AGG 0.462145 7_2:-22950735 None:intergenic
CACCAGCACCAGCACCGACC+TGG 0.469378 7_2:-22950359 None:intergenic
CTTCTACAACCACCTCCAAC+AGG 0.475660 7_2:-22950267 None:intergenic
CGAAACGTTCCTGTTGGAGG+TGG 0.475928 7_2:+22950258 Msa1053420:CDS
TCCACCCAACTGGACACAAC+AGG 0.479085 7_2:+22949636 Msa1053420:CDS
CAGCAAGGAGGAATTGGTAT+TGG 0.479151 7_2:+22949958 Msa1053420:intron
GATCATCTCCAGGTCGGTGC+TGG 0.479318 7_2:+22950351 Msa1053420:CDS
AACCAAAAGCACTAGATTTG+AGG 0.489555 7_2:-22951041 None:intergenic
CGATGTAAAGAGGTTATGAA+TGG 0.495818 7_2:-22950492 None:intergenic
CTTCGAAACGTTCCTGTTGG+AGG 0.496892 7_2:+22950255 Msa1053420:CDS
AATGGAAATGGAAGTGGAAA+TGG 0.500010 7_2:+22950966 Msa1053420:CDS
TTGATATTGCAGTAAAATGC+AGG 0.500120 7_2:+22951327 Msa1053420:three_prime_UTR
GGAAATTGTGTTGGAAAATG+AGG 0.501929 7_2:-22950471 None:intergenic
AGCTATATGTGTGTGTTATG+AGG 0.506294 7_2:+22951184 Msa1053420:three_prime_UTR
CTAGATAGATTGGAAGGGAG+GGG 0.506776 7_2:-22949612 None:intergenic
GTTGAGTTTCAACTTGGTAG+TGG 0.507591 7_2:+22950597 Msa1053420:CDS
ATATTCATCATTCTAAGTTG+TGG 0.509679 7_2:+22951265 Msa1053420:three_prime_UTR
GTCGTTATGACGATGTAAAG+AGG 0.514424 7_2:-22950502 None:intergenic
GTTGCAAATTACTCAAGAAA+GGG 0.514735 7_2:-22950734 None:intergenic
GGCTCTTTGTTGATACCAAA+TGG 0.520108 7_2:+22950648 Msa1053420:CDS
ATACCGGTCTTCTAGACCCT+TGG 0.520730 7_2:-22950056 None:intergenic
GTTATGAATGGAAATTGTGT+TGG 0.523635 7_2:-22950480 None:intergenic
GGTGCTGGTGTTGCTGCTGG+TGG 0.526532 7_2:+22950378 Msa1053420:CDS
TACTCATAATGATCATCTCC+AGG 0.528088 7_2:+22950341 Msa1053420:CDS
TCTAGATAGATTGGAAGGGA+GGG 0.529881 7_2:-22949613 None:intergenic
GAAGCTGATGGCAGCTACCA+AGG 0.530104 7_2:+22950039 Msa1053420:CDS
CTAACACTCTAATTATACCT+TGG 0.540245 7_2:-22951112 None:intergenic
AATACCTGTTGTGTCCAGTT+GGG 0.542054 7_2:-22949640 None:intergenic
ATCTAGATAGATTGGAAGGG+AGG 0.542287 7_2:-22949614 None:intergenic
GCACTTCGAAACGTTCCTGT+TGG 0.543248 7_2:+22950252 Msa1053420:CDS
ACTTTAACTGTATTAACTTG+AGG 0.543542 7_2:-22950864 None:intergenic
ACCTGTTGTGTCCAGTTGGG+TGG 0.544400 7_2:-22949637 None:intergenic
CGACAATAGTTACGTTTCTG+AGG 0.546631 7_2:+22950521 Msa1053420:CDS
ACTAATTCTAATGTGAATGT+TGG 0.552195 7_2:+22950444 Msa1053420:CDS
AGTTACGTTTCTGAGGGCAT+TGG 0.553637 7_2:+22950528 Msa1053420:CDS
CACTAGATTTGAGGATCACA+AGG 0.554201 7_2:-22951032 None:intergenic
GCTATATGTGTGTGTTATGA+GGG 0.556952 7_2:+22951185 Msa1053420:three_prime_UTR
CTACCAAGGGTCTAGAAGAC+CGG 0.558504 7_2:+22950053 Msa1053420:CDS
GACAATAGTTACGTTTCTGA+GGG 0.559200 7_2:+22950522 Msa1053420:CDS
GTGGAAGAAAACAATCATCA+AGG 0.560168 7_2:+22950885 Msa1053420:CDS
TCATTATGAGTAGGTTTCAA+AGG 0.560847 7_2:-22950330 None:intergenic
TGGATATGTGAGTGTGTGGG+TGG 0.561609 7_2:-22949541 None:intergenic
CTTTGACATCTTAGCTCGAT+CGG 0.562486 7_2:-22950085 None:intergenic
GTGGATCTAGATAGATTGGA+AGG 0.563359 7_2:-22949618 None:intergenic
GCTCGATCGGTCATTGATAC+CGG 0.568457 7_2:-22950072 None:intergenic
TAAAAGAGAAAGCTTAGCCA+TGG 0.573718 7_2:+22949585 Msa1053420:exon
GTAGCTGCCATCAGCTTCAA+CGG 0.578179 7_2:-22950034 None:intergenic
TCAATTGGTAATGGTAATGG+TGG 0.579040 7_2:+22950627 Msa1053420:CDS
TAATACCTGTTGTGTCCAGT+TGG 0.582298 7_2:-22949641 None:intergenic
CGTCGTTATTGGACTAGAGG+TGG 0.585783 7_2:+22950228 Msa1053420:CDS
ACTAATGTTGAGTTTCAACT+TGG 0.586983 7_2:+22950591 Msa1053420:CDS
TCTGTCACCGTTGAAGCTGA+TGG 0.588932 7_2:+22950027 Msa1053420:CDS
TGGAGATGATCATTATGAGT+AGG 0.590535 7_2:-22950339 None:intergenic
AAGCTGATGGCAGCTACCAA+GGG 0.593247 7_2:+22950040 Msa1053420:CDS
CAAATGGCATTGGTGAACAA+TGG 0.594140 7_2:+22950664 Msa1053420:CDS
GATAGCGGCTGCAAAGCTGA+TGG 0.600223 7_2:-22949991 None:intergenic
TGTCGTCGTTATTGGACTAG+AGG 0.602398 7_2:+22950225 Msa1053420:CDS
ATGGCATTGGTGAACAATGG+AGG 0.607659 7_2:+22950667 Msa1053420:CDS
GAAATGGTAATGAAAATGCA+TGG 0.613061 7_2:+22950982 Msa1053420:CDS
TTGTTGATACCAAATGGCAT+TGG 0.626903 7_2:+22950654 Msa1053420:CDS
TGGAAGGGAGGGGAAGACCA+TGG 0.634957 7_2:-22949602 None:intergenic
GACATCATTGAAGCTGATAG+CGG 0.648020 7_2:-22950006 None:intergenic
CATAATGATCATCTCCAGGT+CGG 0.654251 7_2:+22950345 Msa1053420:CDS
TGGATCTAGATAGATTGGAA+GGG 0.667798 7_2:-22949617 None:intergenic
TCATATATAGAAATGATCCA+AGG 0.682468 7_2:+22951095 Msa1053420:three_prime_UTR
AAATAATATAATCAGCAAGG+AGG 0.703349 7_2:+22949946 Msa1053420:intron
TAGATTTGAGGATCACAAGG+TGG 0.736101 7_2:-22951029 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAGTTTTGATGAATTTTT+TGG - chr7_2:22949564-22949583 None:intergenic 15.0%
!!! AAAAGTTTTGATGAATTTTT+TGG - chr7_2:22949564-22949583 None:intergenic 15.0%
!!! TATTTTGTAACAAAAGTGTA+AGG - chr7_2:22949931-22949950 None:intergenic 20.0%
!! ACAAAATAATATAATCAGCA+AGG + chr7_2:22949943-22949962 Msa1053420:intron 20.0%
!! TAAAAGAAGAAAAGGAAATT+CGG + chr7_2:22950296-22950315 Msa1053420:CDS 20.0%
!! AATTGAAATAATCCAATTTG+TGG - chr7_2:22950759-22950778 None:intergenic 20.0%
!! CAAATTGGATTATTTCAATT+TGG + chr7_2:22950759-22950778 Msa1053420:CDS 20.0%
!!! GAAATAGTAATGATCTATTT+TGG + chr7_2:22950943-22950962 Msa1053420:CDS 20.0%
!!! CTAAACTTTGTATTTCTAAA+TGG + chr7_2:22951230-22951249 Msa1053420:three_prime_UTR 20.0%
!!! TATTTTGTAACAAAAGTGTA+AGG - chr7_2:22949931-22949950 None:intergenic 20.0%
!! ACAAAATAATATAATCAGCA+AGG + chr7_2:22949943-22949962 Msa1053420:intron 20.0%
!! TAAAAGAAGAAAAGGAAATT+CGG + chr7_2:22950296-22950315 Msa1053420:CDS 20.0%
!! AATTGAAATAATCCAATTTG+TGG - chr7_2:22950759-22950778 None:intergenic 20.0%
!! CAAATTGGATTATTTCAATT+TGG + chr7_2:22950759-22950778 Msa1053420:CDS 20.0%
!!! GAAATAGTAATGATCTATTT+TGG + chr7_2:22950943-22950962 Msa1053420:CDS 20.0%
!!! CTAAACTTTGTATTTCTAAA+TGG + chr7_2:22951230-22951249 Msa1053420:three_prime_UTR 20.0%
! CAAAGATGGAAAAAAGATAA+AGG - chr7_2:22949477-22949496 None:intergenic 25.0%
! AGAAAAAGTGATTACAAAGA+TGG - chr7_2:22949491-22949510 None:intergenic 25.0%
! AAATAATATAATCAGCAAGG+AGG + chr7_2:22949946-22949965 Msa1053420:intron 25.0%
! AGGAACAATAAAAGAAGAAA+AGG + chr7_2:22950288-22950307 Msa1053420:CDS 25.0%
! GCAAATTCTTCTTCTAATAA+TGG + chr7_2:22950417-22950436 Msa1053420:CDS 25.0%
! ACTAATTCTAATGTGAATGT+TGG + chr7_2:22950444-22950463 Msa1053420:CDS 25.0%
! ATTGGATTATTTCAATTTGG+TGG + chr7_2:22950762-22950781 Msa1053420:CDS 25.0%
! TATTCTTCAAGTGTTAGTAT+TGG + chr7_2:22950834-22950853 Msa1053420:CDS 25.0%
!! ACTTTAACTGTATTAACTTG+AGG - chr7_2:22950867-22950886 None:intergenic 25.0%
! TCAAGTTAATACAGTTAAAG+TGG + chr7_2:22950866-22950885 Msa1053420:CDS 25.0%
!!! AGTAATGATCTATTTTGGAA+TGG + chr7_2:22950948-22950967 Msa1053420:CDS 25.0%
! TCATATATAGAAATGATCCA+AGG + chr7_2:22951095-22951114 Msa1053420:three_prime_UTR 25.0%
! ATATTCATCATTCTAAGTTG+TGG + chr7_2:22951265-22951284 Msa1053420:three_prime_UTR 25.0%
! CAAAGATGGAAAAAAGATAA+AGG - chr7_2:22949477-22949496 None:intergenic 25.0%
! AGAAAAAGTGATTACAAAGA+TGG - chr7_2:22949491-22949510 None:intergenic 25.0%
! AAATAATATAATCAGCAAGG+AGG + chr7_2:22949946-22949965 Msa1053420:intron 25.0%
! AGGAACAATAAAAGAAGAAA+AGG + chr7_2:22950288-22950307 Msa1053420:CDS 25.0%
! GCAAATTCTTCTTCTAATAA+TGG + chr7_2:22950417-22950436 Msa1053420:CDS 25.0%
! ACTAATTCTAATGTGAATGT+TGG + chr7_2:22950444-22950463 Msa1053420:CDS 25.0%
! ATTGGATTATTTCAATTTGG+TGG + chr7_2:22950762-22950781 Msa1053420:CDS 25.0%
! TATTCTTCAAGTGTTAGTAT+TGG + chr7_2:22950834-22950853 Msa1053420:CDS 25.0%
!! ACTTTAACTGTATTAACTTG+AGG - chr7_2:22950867-22950886 None:intergenic 25.0%
! TCAAGTTAATACAGTTAAAG+TGG + chr7_2:22950866-22950885 Msa1053420:CDS 25.0%
!!! AGTAATGATCTATTTTGGAA+TGG + chr7_2:22950948-22950967 Msa1053420:CDS 25.0%
! TCATATATAGAAATGATCCA+AGG + chr7_2:22951095-22951114 Msa1053420:three_prime_UTR 25.0%
! ATATTCATCATTCTAAGTTG+TGG + chr7_2:22951265-22951284 Msa1053420:three_prime_UTR 25.0%
TCATTATGAGTAGGTTTCAA+AGG - chr7_2:22950333-22950352 None:intergenic 30.0%
GTTATGAATGGAAATTGTGT+TGG - chr7_2:22950483-22950502 None:intergenic 30.0%
ACTAATGTTGAGTTTCAACT+TGG + chr7_2:22950591-22950610 Msa1053420:CDS 30.0%
!! TCTTCAATTGGTAATGGTAA+TGG + chr7_2:22950624-22950643 Msa1053420:CDS 30.0%
GTTGCAAATTACTCAAGAAA+GGG - chr7_2:22950737-22950756 None:intergenic 30.0%
! AGTAATTTGCAACCACAAAT+TGG + chr7_2:22950744-22950763 Msa1053420:CDS 30.0%
! CAATTTGGTGGAGAAAATAA+TGG + chr7_2:22950774-22950793 Msa1053420:CDS 30.0%
TTGCCAAAAAATCTCTTGAA+TGG + chr7_2:22950915-22950934 Msa1053420:CDS 30.0%
!!! GAACCATTCAAGAGATTTTT+TGG - chr7_2:22950921-22950940 None:intergenic 30.0%
AAAAATCTCTTGAATGGTTC+AGG + chr7_2:22950921-22950940 Msa1053420:CDS 30.0%
!!! GATCTATTTTGGAATGGAAA+TGG + chr7_2:22950954-22950973 Msa1053420:CDS 30.0%
! GAAATGGTAATGAAAATGCA+TGG + chr7_2:22950982-22951001 Msa1053420:CDS 30.0%
!!! GCTTTTGGTTCCTTAATTAA+TGG + chr7_2:22951054-22951073 Msa1053420:three_prime_UTR 30.0%
ATATGCTGCTCCATTAATTA+AGG - chr7_2:22951067-22951086 None:intergenic 30.0%
CTAACACTCTAATTATACCT+TGG - chr7_2:22951115-22951134 None:intergenic 30.0%
! CAAGGTATAATTAGAGTGTT+AGG + chr7_2:22951113-22951132 Msa1053420:three_prime_UTR 30.0%
! ATTAGTTCACTTGCTAACTA+TGG + chr7_2:22951139-22951158 Msa1053420:three_prime_UTR 30.0%
TAACACACACATATAGCTAA+TGG - chr7_2:22951182-22951201 None:intergenic 30.0%
! TGCATTTTACTGCAATATCA+AGG - chr7_2:22951328-22951347 None:intergenic 30.0%
TTGATATTGCAGTAAAATGC+AGG + chr7_2:22951327-22951346 Msa1053420:three_prime_UTR 30.0%
TCATTATGAGTAGGTTTCAA+AGG - chr7_2:22950333-22950352 None:intergenic 30.0%
GTTATGAATGGAAATTGTGT+TGG - chr7_2:22950483-22950502 None:intergenic 30.0%
ACTAATGTTGAGTTTCAACT+TGG + chr7_2:22950591-22950610 Msa1053420:CDS 30.0%
!! TCTTCAATTGGTAATGGTAA+TGG + chr7_2:22950624-22950643 Msa1053420:CDS 30.0%
GTTGCAAATTACTCAAGAAA+GGG - chr7_2:22950737-22950756 None:intergenic 30.0%
! AGTAATTTGCAACCACAAAT+TGG + chr7_2:22950744-22950763 Msa1053420:CDS 30.0%
! CAATTTGGTGGAGAAAATAA+TGG + chr7_2:22950774-22950793 Msa1053420:CDS 30.0%
TTGCCAAAAAATCTCTTGAA+TGG + chr7_2:22950915-22950934 Msa1053420:CDS 30.0%
!!! GAACCATTCAAGAGATTTTT+TGG - chr7_2:22950921-22950940 None:intergenic 30.0%
AAAAATCTCTTGAATGGTTC+AGG + chr7_2:22950921-22950940 Msa1053420:CDS 30.0%
!!! GATCTATTTTGGAATGGAAA+TGG + chr7_2:22950954-22950973 Msa1053420:CDS 30.0%
! GAAATGGTAATGAAAATGCA+TGG + chr7_2:22950982-22951001 Msa1053420:CDS 30.0%
!!! GCTTTTGGTTCCTTAATTAA+TGG + chr7_2:22951054-22951073 Msa1053420:three_prime_UTR 30.0%
ATATGCTGCTCCATTAATTA+AGG - chr7_2:22951067-22951086 None:intergenic 30.0%
CTAACACTCTAATTATACCT+TGG - chr7_2:22951115-22951134 None:intergenic 30.0%
! CAAGGTATAATTAGAGTGTT+AGG + chr7_2:22951113-22951132 Msa1053420:three_prime_UTR 30.0%
! ATTAGTTCACTTGCTAACTA+TGG + chr7_2:22951139-22951158 Msa1053420:three_prime_UTR 30.0%
TAACACACACATATAGCTAA+TGG - chr7_2:22951182-22951201 None:intergenic 30.0%
! TGCATTTTACTGCAATATCA+AGG - chr7_2:22951328-22951347 None:intergenic 30.0%
TTGATATTGCAGTAAAATGC+AGG + chr7_2:22951327-22951346 Msa1053420:three_prime_UTR 30.0%
! TTTTGGATATGTGAGTGTGT+GGG - chr7_2:22949547-22949566 None:intergenic 35.0%
! TTTTTGGATATGTGAGTGTG+TGG - chr7_2:22949548-22949567 None:intergenic 35.0%
TAAAAGAGAAAGCTTAGCCA+TGG + chr7_2:22949585-22949604 Msa1053420:exon 35.0%
TGGATCTAGATAGATTGGAA+GGG - chr7_2:22949620-22949639 None:intergenic 35.0%
TATAATCAGCAAGGAGGAAT+TGG + chr7_2:22949952-22949971 Msa1053420:intron 35.0%
!! GTGTTTGTTGATTCACATCT+TGG - chr7_2:22950147-22950166 None:intergenic 35.0%
! GACGACAAGTTTTGCAAAAA+TGG - chr7_2:22950212-22950231 None:intergenic 35.0%
TGGAGATGATCATTATGAGT+AGG - chr7_2:22950342-22950361 None:intergenic 35.0%
TACTCATAATGATCATCTCC+AGG + chr7_2:22950341-22950360 Msa1053420:CDS 35.0%
GGAAATTGTGTTGGAAAATG+AGG - chr7_2:22950474-22950493 None:intergenic 35.0%
CGATGTAAAGAGGTTATGAA+TGG - chr7_2:22950495-22950514 None:intergenic 35.0%
GACAATAGTTACGTTTCTGA+GGG + chr7_2:22950522-22950541 Msa1053420:CDS 35.0%
GGTTCTTCTTCAATTGGTAA+TGG + chr7_2:22950618-22950637 Msa1053420:CDS 35.0%
!! TCAATTGGTAATGGTAATGG+TGG + chr7_2:22950627-22950646 Msa1053420:CDS 35.0%
TTGTTGATACCAAATGGCAT+TGG + chr7_2:22950654-22950673 Msa1053420:CDS 35.0%
TGATGAACTTGTAGCGAATT+CGG - chr7_2:22950696-22950715 None:intergenic 35.0%
GGTTGCAAATTACTCAAGAA+AGG - chr7_2:22950738-22950757 None:intergenic 35.0%
! AGCCGCAAAGAAATTTGTTT+CGG + chr7_2:22950799-22950818 Msa1053420:CDS 35.0%
GACCGAAACAAATTTCTTTG+CGG - chr7_2:22950804-22950823 None:intergenic 35.0%
! AAGAAATTTGTTTCGGTCGA+AGG + chr7_2:22950806-22950825 Msa1053420:CDS 35.0%
GTGGAAGAAAACAATCATCA+AGG + chr7_2:22950885-22950904 Msa1053420:CDS 35.0%
!!! TTTTGGAATGGAAATGGAAG+TGG + chr7_2:22950960-22950979 Msa1053420:CDS 35.0%
AATGGAAATGGAAGTGGAAA+TGG + chr7_2:22950966-22950985 Msa1053420:CDS 35.0%
! ATCCTCAAATCTAGTGCTTT+TGG + chr7_2:22951039-22951058 Msa1053420:exon 35.0%
!! AACCAAAAGCACTAGATTTG+AGG - chr7_2:22951044-22951063 None:intergenic 35.0%
AGCTATATGTGTGTGTTATG+AGG + chr7_2:22951184-22951203 Msa1053420:three_prime_UTR 35.0%
GCTATATGTGTGTGTTATGA+GGG + chr7_2:22951185-22951204 Msa1053420:three_prime_UTR 35.0%
! TTTTGGATATGTGAGTGTGT+GGG - chr7_2:22949547-22949566 None:intergenic 35.0%
! TTTTTGGATATGTGAGTGTG+TGG - chr7_2:22949548-22949567 None:intergenic 35.0%
TAAAAGAGAAAGCTTAGCCA+TGG + chr7_2:22949585-22949604 Msa1053420:exon 35.0%
TGGATCTAGATAGATTGGAA+GGG - chr7_2:22949620-22949639 None:intergenic 35.0%
TATAATCAGCAAGGAGGAAT+TGG + chr7_2:22949952-22949971 Msa1053420:intron 35.0%
!! GTGTTTGTTGATTCACATCT+TGG - chr7_2:22950147-22950166 None:intergenic 35.0%
! GACGACAAGTTTTGCAAAAA+TGG - chr7_2:22950212-22950231 None:intergenic 35.0%
TGGAGATGATCATTATGAGT+AGG - chr7_2:22950342-22950361 None:intergenic 35.0%
TACTCATAATGATCATCTCC+AGG + chr7_2:22950341-22950360 Msa1053420:CDS 35.0%
GGAAATTGTGTTGGAAAATG+AGG - chr7_2:22950474-22950493 None:intergenic 35.0%
CGATGTAAAGAGGTTATGAA+TGG - chr7_2:22950495-22950514 None:intergenic 35.0%
GACAATAGTTACGTTTCTGA+GGG + chr7_2:22950522-22950541 Msa1053420:CDS 35.0%
GGTTCTTCTTCAATTGGTAA+TGG + chr7_2:22950618-22950637 Msa1053420:CDS 35.0%
!! TCAATTGGTAATGGTAATGG+TGG + chr7_2:22950627-22950646 Msa1053420:CDS 35.0%
TTGTTGATACCAAATGGCAT+TGG + chr7_2:22950654-22950673 Msa1053420:CDS 35.0%
TGATGAACTTGTAGCGAATT+CGG - chr7_2:22950696-22950715 None:intergenic 35.0%
GGTTGCAAATTACTCAAGAA+AGG - chr7_2:22950738-22950757 None:intergenic 35.0%
! AGCCGCAAAGAAATTTGTTT+CGG + chr7_2:22950799-22950818 Msa1053420:CDS 35.0%
GACCGAAACAAATTTCTTTG+CGG - chr7_2:22950804-22950823 None:intergenic 35.0%
! AAGAAATTTGTTTCGGTCGA+AGG + chr7_2:22950806-22950825 Msa1053420:CDS 35.0%
GTGGAAGAAAACAATCATCA+AGG + chr7_2:22950885-22950904 Msa1053420:CDS 35.0%
!!! TTTTGGAATGGAAATGGAAG+TGG + chr7_2:22950960-22950979 Msa1053420:CDS 35.0%
AATGGAAATGGAAGTGGAAA+TGG + chr7_2:22950966-22950985 Msa1053420:CDS 35.0%
! ATCCTCAAATCTAGTGCTTT+TGG + chr7_2:22951039-22951058 Msa1053420:exon 35.0%
!! AACCAAAAGCACTAGATTTG+AGG - chr7_2:22951044-22951063 None:intergenic 35.0%
AGCTATATGTGTGTGTTATG+AGG + chr7_2:22951184-22951203 Msa1053420:three_prime_UTR 35.0%
GCTATATGTGTGTGTTATGA+GGG + chr7_2:22951185-22951204 Msa1053420:three_prime_UTR 35.0%
TCTAGATAGATTGGAAGGGA+GGG - chr7_2:22949616-22949635 None:intergenic 40.0%
ATCTAGATAGATTGGAAGGG+AGG - chr7_2:22949617-22949636 None:intergenic 40.0%
GTGGATCTAGATAGATTGGA+AGG - chr7_2:22949621-22949640 None:intergenic 40.0%
TTGGGTGGATCTAGATAGAT+TGG - chr7_2:22949625-22949644 None:intergenic 40.0%
AATACCTGTTGTGTCCAGTT+GGG - chr7_2:22949643-22949662 None:intergenic 40.0%
TAATACCTGTTGTGTCCAGT+TGG - chr7_2:22949644-22949663 None:intergenic 40.0%
GACATCATTGAAGCTGATAG+CGG - chr7_2:22950009-22950028 None:intergenic 40.0%
CTTTGACATCTTAGCTCGAT+CGG - chr7_2:22950088-22950107 None:intergenic 40.0%
! CAAGTTTTGCAAAAATGGCG+TGG - chr7_2:22950207-22950226 None:intergenic 40.0%
GCAAAACTTGTCGTCGTTAT+TGG + chr7_2:22950217-22950236 Msa1053420:CDS 40.0%
CATAATGATCATCTCCAGGT+CGG + chr7_2:22950345-22950364 Msa1053420:CDS 40.0%
GTCGTTATGACGATGTAAAG+AGG - chr7_2:22950505-22950524 None:intergenic 40.0%
CGACAATAGTTACGTTTCTG+AGG + chr7_2:22950521-22950540 Msa1053420:CDS 40.0%
GTTGAGTTTCAACTTGGTAG+TGG + chr7_2:22950597-22950616 Msa1053420:CDS 40.0%
! GGTAGTGGTTCTTCTTCAAT+TGG + chr7_2:22950612-22950631 Msa1053420:CDS 40.0%
GGCTCTTTGTTGATACCAAA+TGG + chr7_2:22950648-22950667 Msa1053420:CDS 40.0%
CATTGTTCACCAATGCCATT+TGG - chr7_2:22950666-22950685 None:intergenic 40.0%
!! CAAATGGCATTGGTGAACAA+TGG + chr7_2:22950664-22950683 Msa1053420:CDS 40.0%
CAAGGTGGTGAAGTGAAATT+AGG - chr7_2:22951017-22951036 None:intergenic 40.0%
TAGATTTGAGGATCACAAGG+TGG - chr7_2:22951032-22951051 None:intergenic 40.0%
CACTAGATTTGAGGATCACA+AGG - chr7_2:22951035-22951054 None:intergenic 40.0%
TCTAGATAGATTGGAAGGGA+GGG - chr7_2:22949616-22949635 None:intergenic 40.0%
ATCTAGATAGATTGGAAGGG+AGG - chr7_2:22949617-22949636 None:intergenic 40.0%
GTGGATCTAGATAGATTGGA+AGG - chr7_2:22949621-22949640 None:intergenic 40.0%
TTGGGTGGATCTAGATAGAT+TGG - chr7_2:22949625-22949644 None:intergenic 40.0%
AATACCTGTTGTGTCCAGTT+GGG - chr7_2:22949643-22949662 None:intergenic 40.0%
TAATACCTGTTGTGTCCAGT+TGG - chr7_2:22949644-22949663 None:intergenic 40.0%
GACATCATTGAAGCTGATAG+CGG - chr7_2:22950009-22950028 None:intergenic 40.0%
CTTTGACATCTTAGCTCGAT+CGG - chr7_2:22950088-22950107 None:intergenic 40.0%
! CAAGTTTTGCAAAAATGGCG+TGG - chr7_2:22950207-22950226 None:intergenic 40.0%
GCAAAACTTGTCGTCGTTAT+TGG + chr7_2:22950217-22950236 Msa1053420:CDS 40.0%
CATAATGATCATCTCCAGGT+CGG + chr7_2:22950345-22950364 Msa1053420:CDS 40.0%
GTCGTTATGACGATGTAAAG+AGG - chr7_2:22950505-22950524 None:intergenic 40.0%
CGACAATAGTTACGTTTCTG+AGG + chr7_2:22950521-22950540 Msa1053420:CDS 40.0%
GTTGAGTTTCAACTTGGTAG+TGG + chr7_2:22950597-22950616 Msa1053420:CDS 40.0%
! GGTAGTGGTTCTTCTTCAAT+TGG + chr7_2:22950612-22950631 Msa1053420:CDS 40.0%
GGCTCTTTGTTGATACCAAA+TGG + chr7_2:22950648-22950667 Msa1053420:CDS 40.0%
CATTGTTCACCAATGCCATT+TGG - chr7_2:22950666-22950685 None:intergenic 40.0%
!! CAAATGGCATTGGTGAACAA+TGG + chr7_2:22950664-22950683 Msa1053420:CDS 40.0%
CAAGGTGGTGAAGTGAAATT+AGG - chr7_2:22951017-22951036 None:intergenic 40.0%
TAGATTTGAGGATCACAAGG+TGG - chr7_2:22951032-22951051 None:intergenic 40.0%
CACTAGATTTGAGGATCACA+AGG - chr7_2:22951035-22951054 None:intergenic 40.0%
CTAGATAGATTGGAAGGGAG+GGG - chr7_2:22949615-22949634 None:intergenic 45.0%
TCTATCTAGATCCACCCAAC+TGG + chr7_2:22949626-22949645 Msa1053420:CDS 45.0%
CAGCAAGGAGGAATTGGTAT+TGG + chr7_2:22949958-22949977 Msa1053420:intron 45.0%
! TGTCGTCGTTATTGGACTAG+AGG + chr7_2:22950225-22950244 Msa1053420:CDS 45.0%
! AGTTACGTTTCTGAGGGCAT+TGG + chr7_2:22950528-22950547 Msa1053420:CDS 45.0%
!! TGAGGGCATTGGTTCTTTGT+TGG + chr7_2:22950539-22950558 Msa1053420:CDS 45.0%
!! ATGGCATTGGTGAACAATGG+AGG + chr7_2:22950667-22950686 Msa1053420:CDS 45.0%
CTAGATAGATTGGAAGGGAG+GGG - chr7_2:22949615-22949634 None:intergenic 45.0%
TCTATCTAGATCCACCCAAC+TGG + chr7_2:22949626-22949645 Msa1053420:CDS 45.0%
CAGCAAGGAGGAATTGGTAT+TGG + chr7_2:22949958-22949977 Msa1053420:intron 45.0%
! TGTCGTCGTTATTGGACTAG+AGG + chr7_2:22950225-22950244 Msa1053420:CDS 45.0%
! AGTTACGTTTCTGAGGGCAT+TGG + chr7_2:22950528-22950547 Msa1053420:CDS 45.0%
!! TGAGGGCATTGGTTCTTTGT+TGG + chr7_2:22950539-22950558 Msa1053420:CDS 45.0%
!! ATGGCATTGGTGAACAATGG+AGG + chr7_2:22950667-22950686 Msa1053420:CDS 45.0%
TGGATATGTGAGTGTGTGGG+TGG - chr7_2:22949544-22949563 None:intergenic 50.0%
TCTGTCACCGTTGAAGCTGA+TGG + chr7_2:22950027-22950046 Msa1053420:CDS 50.0%
GTAGCTGCCATCAGCTTCAA+CGG - chr7_2:22950037-22950056 None:intergenic 50.0%
AAGCTGATGGCAGCTACCAA+GGG + chr7_2:22950040-22950059 Msa1053420:CDS 50.0%
CTACCAAGGGTCTAGAAGAC+CGG + chr7_2:22950053-22950072 Msa1053420:CDS 50.0%
ATACCGGTCTTCTAGACCCT+TGG - chr7_2:22950059-22950078 None:intergenic 50.0%
GCTCGATCGGTCATTGATAC+CGG - chr7_2:22950075-22950094 None:intergenic 50.0%
!! GTGCTGCTGCAGCATCATTT+TGG - chr7_2:22950116-22950135 None:intergenic 50.0%
! CGTCGTTATTGGACTAGAGG+TGG + chr7_2:22950228-22950247 Msa1053420:CDS 50.0%
GCACTTCGAAACGTTCCTGT+TGG + chr7_2:22950252-22950271 Msa1053420:CDS 50.0%
CTTCGAAACGTTCCTGTTGG+AGG + chr7_2:22950255-22950274 Msa1053420:CDS 50.0%
CTTCTACAACCACCTCCAAC+AGG - chr7_2:22950270-22950289 None:intergenic 50.0%
CTGTTGGAGGTGGTTGTAGA+AGG + chr7_2:22950268-22950287 Msa1053420:CDS 50.0%
TGGATATGTGAGTGTGTGGG+TGG - chr7_2:22949544-22949563 None:intergenic 50.0%
TCTGTCACCGTTGAAGCTGA+TGG + chr7_2:22950027-22950046 Msa1053420:CDS 50.0%
GTAGCTGCCATCAGCTTCAA+CGG - chr7_2:22950037-22950056 None:intergenic 50.0%
AAGCTGATGGCAGCTACCAA+GGG + chr7_2:22950040-22950059 Msa1053420:CDS 50.0%
CTACCAAGGGTCTAGAAGAC+CGG + chr7_2:22950053-22950072 Msa1053420:CDS 50.0%
ATACCGGTCTTCTAGACCCT+TGG - chr7_2:22950059-22950078 None:intergenic 50.0%
GCTCGATCGGTCATTGATAC+CGG - chr7_2:22950075-22950094 None:intergenic 50.0%
!! GTGCTGCTGCAGCATCATTT+TGG - chr7_2:22950116-22950135 None:intergenic 50.0%
! CGTCGTTATTGGACTAGAGG+TGG + chr7_2:22950228-22950247 Msa1053420:CDS 50.0%
GCACTTCGAAACGTTCCTGT+TGG + chr7_2:22950252-22950271 Msa1053420:CDS 50.0%
CTTCGAAACGTTCCTGTTGG+AGG + chr7_2:22950255-22950274 Msa1053420:CDS 50.0%
CTTCTACAACCACCTCCAAC+AGG - chr7_2:22950270-22950289 None:intergenic 50.0%
CTGTTGGAGGTGGTTGTAGA+AGG + chr7_2:22950268-22950287 Msa1053420:CDS 50.0%
TCCACCCAACTGGACACAAC+AGG + chr7_2:22949636-22949655 Msa1053420:CDS 55.0%
ACCTGTTGTGTCCAGTTGGG+TGG - chr7_2:22949640-22949659 None:intergenic 55.0%
! GATAGCGGCTGCAAAGCTGA+TGG - chr7_2:22949994-22950013 None:intergenic 55.0%
GAAGCTGATGGCAGCTACCA+AGG + chr7_2:22950039-22950058 Msa1053420:CDS 55.0%
CGAAACGTTCCTGTTGGAGG+TGG + chr7_2:22950258-22950277 Msa1053420:CDS 55.0%
TCCACCCAACTGGACACAAC+AGG + chr7_2:22949636-22949655 Msa1053420:CDS 55.0%
ACCTGTTGTGTCCAGTTGGG+TGG - chr7_2:22949640-22949659 None:intergenic 55.0%
! GATAGCGGCTGCAAAGCTGA+TGG - chr7_2:22949994-22950013 None:intergenic 55.0%
GAAGCTGATGGCAGCTACCA+AGG + chr7_2:22950039-22950058 Msa1053420:CDS 55.0%
CGAAACGTTCCTGTTGGAGG+TGG + chr7_2:22950258-22950277 Msa1053420:CDS 55.0%
TGGAAGGGAGGGGAAGACCA+TGG - chr7_2:22949605-22949624 None:intergenic 60.0%
GATCATCTCCAGGTCGGTGC+TGG + chr7_2:22950351-22950370 Msa1053420:CDS 60.0%
TGGAAGGGAGGGGAAGACCA+TGG - chr7_2:22949605-22949624 None:intergenic 60.0%
GATCATCTCCAGGTCGGTGC+TGG + chr7_2:22950351-22950370 Msa1053420:CDS 60.0%
!! GCTGGTGCTGGTGTTGCTGC+TGG + chr7_2:22950375-22950394 Msa1053420:CDS 65.0%
!! GGTGCTGGTGTTGCTGCTGG+TGG + chr7_2:22950378-22950397 Msa1053420:CDS 65.0%
!! GCTGGTGCTGGTGTTGCTGC+TGG + chr7_2:22950375-22950394 Msa1053420:CDS 65.0%
!! GGTGCTGGTGTTGCTGCTGG+TGG + chr7_2:22950378-22950397 Msa1053420:CDS 65.0%
!! CTCCAGGTCGGTGCTGGTGC+TGG + chr7_2:22950357-22950376 Msa1053420:CDS 70.0%
!! CACCAGCACCAGCACCGACC+TGG - chr7_2:22950362-22950381 None:intergenic 70.0%
!! GTCGGTGCTGGTGCTGGTGC+TGG + chr7_2:22950363-22950382 Msa1053420:CDS 70.0%
!! CTCCAGGTCGGTGCTGGTGC+TGG + chr7_2:22950357-22950376 Msa1053420:CDS 70.0%
!! CACCAGCACCAGCACCGACC+TGG - chr7_2:22950362-22950381 None:intergenic 70.0%
!! GTCGGTGCTGGTGCTGGTGC+TGG + chr7_2:22950363-22950382 Msa1053420:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 22949474 22951355 22949474 ID=Msa1053420;Name=Msa1053420
chr7_2 mRNA 22949474 22951355 22949474 ID=Msa1053420-mRNA-1;Parent=Msa1053420;Name=Msa1053420-mRNA-1;_AED=0.00;_eAED=0.00;_QI=130|1|1|1|0|0.5|2|303|381
chr7_2 exon 22949474 22949657 22949474 ID=Msa1053420-mRNA-1:exon:5179;Parent=Msa1053420-mRNA-1
chr7_2 exon 22949961 22951355 22949961 ID=Msa1053420-mRNA-1:exon:5180;Parent=Msa1053420-mRNA-1
chr7_2 five_prime_UTR 22949474 22949603 22949474 ID=Msa1053420-mRNA-1:five_prime_utr;Parent=Msa1053420-mRNA-1
chr7_2 CDS 22949604 22949657 22949604 ID=Msa1053420-mRNA-1:cds;Parent=Msa1053420-mRNA-1
chr7_2 CDS 22949961 22951052 22949961 ID=Msa1053420-mRNA-1:cds;Parent=Msa1053420-mRNA-1
chr7_2 three_prime_UTR 22951053 22951355 22951053 ID=Msa1053420-mRNA-1:three_prime_utr;Parent=Msa1053420-mRNA-1
Gene Sequence

>Msa1053420

ATGGTCTTCCCCTCCCTTCCAATCTATCTAGATCCACCCAACTGGACACAACAGCAAGGAGGAATTGGTATTGGCGATCAAAATCCATCAGCTTTGCAGCCGCTATCAGCTTCAATGATGTCTGTCACCGTTGAAGCTGATGGCAGCTACCAAGGGTCTAGAAGACCGGTATCAATGACCGATCGAGCTAAGATGTCAAAGATACACCAAAATGATGCTGCAGCAGCACAGAAATGTCCAAGATGTGAATCAACAAACACAAAGTTCTGCTACTACAACAACTACAATCTTTCACAACCACGCCATTTTTGCAAAACTTGTCGTCGTTATTGGACTAGAGGTGGTGCACTTCGAAACGTTCCTGTTGGAGGTGGTTGTAGAAGGAACAATAAAAGAAGAAAAGGAAATTCGGTATCAAAATCACCTTTGAAACCTACTCATAATGATCATCTCCAGGTCGGTGCTGGTGCTGGTGCTGGTGTTGCTGCTGGTGGTTCTAGCTCAGCAAGTGCAAATTCTTCTTCTAATAATGGTTGCACTAATTCTAATGTGAATGTTGGAATGCCTCATTTTCCAACACAATTTCCATTCATAACCTCTTTACATCGTCATAACGACAATAGTTACGTTTCTGAGGGCATTGGTTCTTTGTTGGAAAAAAATATGAGCAATAGTACTACTACTACTAATGTTGAGTTTCAACTTGGTAGTGGTTCTTCTTCAATTGGTAATGGTAATGGTGGCTCTTTGTTGATACCAAATGGCATTGGTGAACAATGGAGGTTTCCGAATTCGCTACAAGTTCATCAACAACAATATCAACAATTCCCTTTCTTGAGTAATTTGCAACCACAAATTGGATTATTTCAATTTGGTGGAGAAAATAATGGAGAGCCGCAAAGAAATTTGTTTCGGTCGAAGGAAACATATTCTTCAAGTGTTAGTATTGGAATGATGCCTCAAGTTAATACAGTTAAAGTGGAAGAAAACAATCATCAAGGTTTGAGTTTGCCAAAAAATCTCTTGAATGGTTCAGGAAATAGTAATGATCTATTTTGGAATGGAAATGGAAGTGGAAATGGTAATGAAAATGCATGGAATGAAGTTCCTAATTTCACTTCACCACCTTGTGATCCTCAAATCTAG
Protein sequence

>Msa1053420

MVFPSLPIYLDPPNWTQQQGGIGIGDQNPSALQPLSASMMSVTVEADGSYQGSRRPVSMTDRAKMSKIHQNDAAAAQKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNNKRRKGNSVSKSPLKPTHNDHLQVGAGAGAGVAAGGSSSASANSSSNNGCTNSNVNVGMPHFPTQFPFITSLHRHNDNSYVSEGIGSLLEKNMSNSTTTTNVEFQLGSGSSSIGNGNGGSLLIPNGIGEQWRFPNSLQVHQQQYQQFPFLSNLQPQIGLFQFGGENNGEPQRNLFRSKETYSSSVSIGMMPQVNTVKVEENNHQGLSLPKNLLNGSGNSNDLFWNGNGSGNGNENAWNEVPNFTSPPCDPQI*