Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1053480 | XP_024626123.1 | 89.189 | 407 | 27 | 2 | 1 | 391 | 1 | 406 | 0.0 | 725 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1053480 | sp|Q6X7J4|WOX9_ARATH | 64.800 | 125 | 32 | 2 | 1 | 115 | 1 | 123 | 1.08e-46 | 167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1053480 | U5LKY5 | 89.189 | 407 | 27 | 2 | 1 | 391 | 1 | 406 | 0.0 | 725 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1053480 | TF | HB-WOX |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1053480 | MtrunA17_Chr7g0223471 | 89.189 | 407 | 27 | 2 | 1 | 391 | 1 | 406 | 0.0 | 725 |
| Msa1053480 | MtrunA17_Chr4g0046231 | 56.322 | 348 | 107 | 6 | 66 | 390 | 1 | 326 | 1.96e-108 | 322 |
| Msa1053480 | MtrunA17_Chr2g0283141 | 41.492 | 429 | 189 | 11 | 1 | 390 | 1 | 406 | 4.24e-81 | 256 |
| Msa1053480 | MtrunA17_Chr4g0046241 | 62.658 | 158 | 50 | 1 | 163 | 320 | 1 | 149 | 1.07e-59 | 191 |
| Msa1053480 | MtrunA17_Chr4g0046251 | 67.164 | 67 | 22 | 0 | 324 | 390 | 19 | 85 | 1.79e-25 | 99.0 |
| Msa1053480 | MtrunA17_Chr6g0460691 | 65.000 | 60 | 21 | 0 | 39 | 98 | 24 | 83 | 7.38e-23 | 97.8 |
| Msa1053480 | MtrunA17_Chr7g0254251 | 68.333 | 60 | 19 | 0 | 37 | 96 | 18 | 77 | 8.91e-23 | 96.7 |
| Msa1053480 | MtrunA17_Chr4g0043891 | 45.714 | 70 | 38 | 0 | 42 | 111 | 3 | 72 | 2.77e-17 | 80.9 |
| Msa1053480 | MtrunA17_Chr5g0436661 | 41.250 | 80 | 47 | 0 | 29 | 108 | 15 | 94 | 4.56e-16 | 75.9 |
| Msa1053480 | MtrunA17_Chr8g0392991 | 50.000 | 62 | 31 | 0 | 47 | 108 | 96 | 157 | 5.53e-16 | 78.6 |
| Msa1053480 | MtrunA17_Chr5g0405351 | 48.438 | 64 | 32 | 1 | 47 | 109 | 30 | 93 | 4.76e-15 | 75.1 |
| Msa1053480 | MtrunA17_Chr1g0212511 | 42.857 | 77 | 40 | 1 | 30 | 106 | 72 | 144 | 2.43e-14 | 72.4 |
| Msa1053480 | MtrunA17_Chr4g0031341 | 45.161 | 62 | 34 | 0 | 47 | 108 | 25 | 86 | 1.99e-13 | 69.7 |
| Msa1053480 | MtrunA17_Chr1g0153171 | 46.774 | 62 | 33 | 0 | 47 | 108 | 90 | 151 | 3.02e-13 | 68.9 |
| Msa1053480 | MtrunA17_Chr3g0144021 | 44.444 | 63 | 35 | 0 | 45 | 107 | 80 | 142 | 4.10e-13 | 68.2 |
| Msa1053480 | MtrunA17_Chr7g0238431 | 41.096 | 73 | 43 | 0 | 41 | 113 | 2 | 74 | 1.00e-12 | 66.6 |
| Msa1053480 | MtrunA17_Chr7g0222981 | 40.625 | 64 | 38 | 0 | 45 | 108 | 66 | 129 | 7.00e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1053480 | AT2G33880.1 | 64.800 | 125 | 32 | 2 | 1 | 115 | 1 | 123 | 1.10e-47 | 167 |
| Msa1053480 | AT2G33880.2 | 64.800 | 125 | 32 | 2 | 1 | 115 | 1 | 123 | 1.45e-47 | 167 |
| Msa1053480 | AT5G45980.1 | 53.125 | 128 | 52 | 1 | 1 | 120 | 1 | 128 | 8.25e-41 | 147 |
| Msa1053480 | AT3G03660.1 | 70.370 | 54 | 16 | 0 | 45 | 98 | 31 | 84 | 3.73e-22 | 95.5 |
| Msa1053480 | AT3G03660.2 | 70.370 | 54 | 16 | 0 | 45 | 98 | 31 | 84 | 6.19e-22 | 95.5 |
| Msa1053480 | AT3G03660.4 | 67.797 | 59 | 18 | 1 | 41 | 98 | 26 | 84 | 8.23e-22 | 95.1 |
| Msa1053480 | AT3G03660.3 | 67.797 | 59 | 18 | 1 | 41 | 98 | 26 | 84 | 1.24e-21 | 95.1 |
| Msa1053480 | AT5G17810.3 | 68.519 | 54 | 17 | 0 | 45 | 98 | 19 | 72 | 2.95e-21 | 92.8 |
| Msa1053480 | AT5G17810.1 | 68.519 | 54 | 17 | 0 | 45 | 98 | 19 | 72 | 2.97e-21 | 92.8 |
| Msa1053480 | AT5G17810.2 | 68.519 | 54 | 17 | 0 | 45 | 98 | 19 | 72 | 2.97e-21 | 92.8 |
| Msa1053480 | AT5G05770.1 | 40.000 | 75 | 45 | 0 | 47 | 121 | 29 | 103 | 3.01e-15 | 72.0 |
| Msa1053480 | AT3G18010.1 | 38.384 | 99 | 52 | 2 | 47 | 145 | 76 | 165 | 3.69e-15 | 76.6 |
| Msa1053480 | AT3G11260.1 | 45.312 | 64 | 35 | 0 | 47 | 110 | 24 | 87 | 1.53e-14 | 72.0 |
| Msa1053480 | AT2G17950.1 | 48.438 | 64 | 32 | 1 | 47 | 109 | 38 | 101 | 2.42e-14 | 73.6 |
| Msa1053480 | AT4G35550.1 | 46.032 | 63 | 34 | 0 | 45 | 107 | 97 | 159 | 3.09e-14 | 72.8 |
| Msa1053480 | AT1G46480.2 | 46.774 | 62 | 33 | 0 | 47 | 108 | 90 | 151 | 7.99e-14 | 70.1 |
| Msa1053480 | AT1G20700.2 | 44.444 | 63 | 35 | 0 | 45 | 107 | 31 | 93 | 1.42e-13 | 68.2 |
| Msa1053480 | AT1G20700.1 | 44.444 | 63 | 35 | 0 | 45 | 107 | 93 | 155 | 2.71e-13 | 68.9 |
| Msa1053480 | AT1G20700.3 | 44.444 | 63 | 35 | 0 | 45 | 107 | 93 | 155 | 2.93e-13 | 68.6 |
| Msa1053480 | AT1G46480.1 | 46.774 | 62 | 33 | 0 | 47 | 108 | 90 | 151 | 3.78e-13 | 69.3 |
| Msa1053480 | AT2G28610.1 | 42.647 | 68 | 39 | 0 | 41 | 108 | 2 | 69 | 1.42e-12 | 67.4 |
| Msa1053480 | AT5G59340.1 | 41.935 | 62 | 36 | 0 | 47 | 108 | 14 | 75 | 1.74e-12 | 67.4 |
| Msa1053480 | AT2G01500.1 | 40.506 | 79 | 39 | 1 | 31 | 101 | 37 | 115 | 3.30e-12 | 67.0 |
| Msa1053480 | AT5G46010.1 | 46.154 | 65 | 34 | 1 | 43 | 106 | 50 | 114 | 1.25e-11 | 61.6 |
Find 101 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCATCTTGGCTTTGGTTC+TGG | 0.191744 | 7_2:+23106070 | None:intergenic |
| CAAGAACCACAACTTAATTT+TGG | 0.218741 | 7_2:-23105317 | Msa1053480:CDS |
| ATGAACTATGGAAGTGTTAA+TGG | 0.219154 | 7_2:-23105509 | Msa1053480:CDS |
| GGGTGTGGGTGGTTGTAAAT+TGG | 0.233407 | 7_2:+23105628 | None:intergenic |
| CATAGGTTTAATCACTTATC+TGG | 0.257497 | 7_2:-23105536 | Msa1053480:CDS |
| CACCATCCCTGAGTTGAAAA+TGG | 0.259677 | 7_2:+23106015 | None:intergenic |
| AAAGGATGCACGAACGTTAA+AGG | 0.277456 | 7_2:+23104708 | None:intergenic |
| AATAAGCATCAACTTGGTTT+TGG | 0.278040 | 7_2:+23105669 | None:intergenic |
| TTATCTGGTTTCATGAACTA+TGG | 0.293987 | 7_2:-23105521 | Msa1053480:CDS |
| TTTGGGTTCCATCTTGGCTT+TGG | 0.323964 | 7_2:+23106064 | None:intergenic |
| TGCGAATTTGTTGTGGCTTT+GGG | 0.325891 | 7_2:+23106047 | None:intergenic |
| ATGCGAATTTGTTGTGGCTT+TGG | 0.336580 | 7_2:+23106046 | None:intergenic |
| AATTAAGTTGTGGTTCTTGC+TGG | 0.337280 | 7_2:+23105321 | None:intergenic |
| TGTGGCTTTGGGTTCCATCT+TGG | 0.346409 | 7_2:+23106058 | None:intergenic |
| TCATCATCGTCATCTTCTTC+TGG | 0.355757 | 7_2:-23105800 | Msa1053480:CDS |
| CTCAACTCGTCTCTCTTAAC+TGG | 0.358193 | 7_2:-23107024 | Msa1053480:intron |
| TTTAACGTTCGTGCATCCTT+TGG | 0.359074 | 7_2:-23104706 | Msa1053480:CDS |
| CGTGAACAATTACAAGAGTT+TGG | 0.359135 | 7_2:-23105962 | Msa1053480:CDS |
| ATTGTAATTTCTAACAATAT+CGG | 0.371493 | 7_2:-23105752 | Msa1053480:CDS |
| CATGAGCTCATCATGAACTA+TGG | 0.376168 | 7_2:-23105428 | Msa1053480:CDS |
| ATCTTCGTAATTTCCTCCCT+TGG | 0.380246 | 7_2:+23105986 | None:intergenic |
| TACTAAGGACGCCTCATTCA+TGG | 0.386072 | 7_2:-23104743 | Msa1053480:CDS |
| TCCAGTTCTAACCGATGAAT+GGG | 0.405372 | 7_2:-23104650 | Msa1053480:CDS |
| TGTGGTGTTGTCATGGCATT+AGG | 0.415749 | 7_2:+23105557 | None:intergenic |
| GGATTCTCCAATGCTAATGA+TGG | 0.428470 | 7_2:-23105731 | Msa1053480:CDS |
| TCAGGATTTGGCGTGGAAGA+TGG | 0.430982 | 7_2:-23104787 | Msa1053480:intron |
| CCCCATTCATCGGTTAGAAC+TGG | 0.434360 | 7_2:+23104649 | None:intergenic |
| GCCTTGAGAATTCCGTTGGT+TGG | 0.439358 | 7_2:+23107047 | None:intergenic |
| TTCGTAATTTCCTCCCTTGG+TGG | 0.441626 | 7_2:+23105989 | None:intergenic |
| GTTGTAAATTGGTTTCAGTC+GGG | 0.445592 | 7_2:+23105639 | None:intergenic |
| CCATGGTGCTACTTATTACC+TGG | 0.446959 | 7_2:-23104605 | Msa1053480:intron |
| AAGGATGCACGAACGTTAAA+GGG | 0.448612 | 7_2:+23104709 | None:intergenic |
| TTAGAAATTACAATTTCATC+GGG | 0.455420 | 7_2:+23105761 | None:intergenic |
| CTCCAGTTCTAACCGATGAA+TGG | 0.457716 | 7_2:-23104651 | Msa1053480:CDS |
| TTTGTTTGCTTCTAGACTTA+CGG | 0.457990 | 7_2:+23105900 | None:intergenic |
| CGCCTCATTCATGGTTGATG+TGG | 0.462527 | 7_2:-23104734 | Msa1053480:CDS |
| GCAGTTCTCTTTGACTCCTC+TGG | 0.463999 | 7_2:-23104676 | Msa1053480:CDS |
| GCCTCATTCATGGTTGATGT+GGG | 0.464076 | 7_2:-23104733 | Msa1053480:CDS |
| GGTTGTAAATTGGTTTCAGT+CGG | 0.475867 | 7_2:+23105638 | None:intergenic |
| TCGTAATTTCCTCCCTTGGT+GGG | 0.478421 | 7_2:+23105990 | None:intergenic |
| GTTAGAAATTACAATTTCAT+CGG | 0.486033 | 7_2:+23105760 | None:intergenic |
| TCATTAATATGATTCTCCAC+AGG | 0.487622 | 7_2:+23105590 | None:intergenic |
| CTCCAGAACCAAAGCCAAGA+TGG | 0.487752 | 7_2:-23106072 | Msa1053480:CDS |
| GGAATCTCCTCAATCGATGA+TGG | 0.491750 | 7_2:-23105395 | Msa1053480:CDS |
| GTGTTTCTCGTTTCTTGTTG+TGG | 0.496273 | 7_2:+23105864 | None:intergenic |
| AATTACAATTTCATCGGGAG+AGG | 0.500444 | 7_2:+23105766 | None:intergenic |
| CCGATGGTAGTGGGAGGAAG+AGG | 0.502096 | 7_2:+23105248 | None:intergenic |
| ATTCCGTTGGTTGGACGCAT+TGG | 0.507387 | 7_2:+23107056 | None:intergenic |
| AACAGGTGCACCGATGGTAG+TGG | 0.510741 | 7_2:+23105238 | None:intergenic |
| CAATATTGTTTAGGTGGAGA+TGG | 0.514881 | 7_2:-23106106 | Msa1053480:intron |
| CACCATCCCATCATTAGCAT+TGG | 0.520729 | 7_2:+23105724 | None:intergenic |
| TTGAAACCAGTAAAAGACAT+TGG | 0.529718 | 7_2:+23105925 | None:intergenic |
| TGAGGCCTTGAGAATTCCGT+TGG | 0.536803 | 7_2:+23107043 | None:intergenic |
| AGGTAAGGGTTGAACCATTG+AGG | 0.538283 | 7_2:+23105481 | None:intergenic |
| ATCATATCCATCATCGATTG+AGG | 0.539856 | 7_2:+23105388 | None:intergenic |
| TCGAGAATGCGAATTTGTTG+TGG | 0.542611 | 7_2:+23106040 | None:intergenic |
| CCTCTTCCTCCCACTACCAT+CGG | 0.542954 | 7_2:-23105248 | Msa1053480:intron |
| AGAAGATGACGATGATGAGT+TGG | 0.545042 | 7_2:+23105805 | None:intergenic |
| GAAGATGACGATGATGAGTT+GGG | 0.545800 | 7_2:+23105806 | None:intergenic |
| CATTAATATGATTCTCCACA+GGG | 0.547386 | 7_2:+23105591 | None:intergenic |
| GCTAGGCCAATGTTTGTTCG+AGG | 0.550853 | 7_2:+23107095 | None:intergenic |
| TGTTAATGGAAGCTCCTCAA+TGG | 0.556181 | 7_2:-23105495 | Msa1053480:CDS |
| TTACAAGAGTTTGGTCAAGT+TGG | 0.556243 | 7_2:-23105953 | Msa1053480:CDS |
| CCCCACATCAACCATGAATG+AGG | 0.565657 | 7_2:+23104732 | None:intergenic |
| ACCATGGTGGAGCGAATCGA+GGG | 0.568055 | 7_2:+23104621 | None:intergenic |
| GTAGACTTCTTGAACATGCT+AGG | 0.571860 | 7_2:+23107078 | None:intergenic |
| TGGCTTCCTCGAACAAACAT+TGG | 0.573120 | 7_2:-23107101 | Msa1053480:CDS |
| CGAGAAACACAACAAAACTC+TGG | 0.574956 | 7_2:-23105851 | Msa1053480:CDS |
| AAACCTATGTGGTGTTGTCA+TGG | 0.586615 | 7_2:+23105550 | None:intergenic |
| TTGTAAATTGGTTTCAGTCG+GGG | 0.588784 | 7_2:+23105640 | None:intergenic |
| GATTCTCCAATGCTAATGAT+GGG | 0.589822 | 7_2:-23105730 | Msa1053480:CDS |
| CACCATGGTGGAGCGAATCG+AGG | 0.590019 | 7_2:+23104620 | None:intergenic |
| AAAATGTACTGTGATTACTA+AGG | 0.592453 | 7_2:-23104758 | Msa1053480:CDS |
| GAGGGTAACACCCCATTCAT+CGG | 0.593009 | 7_2:+23104639 | None:intergenic |
| CTCCAATGCTAATGATGGGA+TGG | 0.594670 | 7_2:-23105726 | Msa1053480:CDS |
| TCCAACCAACGGAATTCTCA+AGG | 0.602756 | 7_2:-23107048 | Msa1053480:CDS |
| GAGAACTGCTCGATCTCCAA+AGG | 0.604797 | 7_2:+23104690 | None:intergenic |
| CTACCAATGCGTCCAACCAA+CGG | 0.608541 | 7_2:-23107059 | Msa1053480:CDS |
| GATAAGTGATTAAACCTATG+TGG | 0.608582 | 7_2:+23105539 | None:intergenic |
| TGTGAAAATAAGCATCAACT+TGG | 0.611249 | 7_2:+23105663 | None:intergenic |
| TGATCAAGAGAAGAGTCAAG+AGG | 0.611568 | 7_2:-23105369 | Msa1053480:CDS |
| GCAACACCAAAATTAAGTTG+TGG | 0.616333 | 7_2:+23105311 | None:intergenic |
| CAGTTAAGAGAGACGAGTTG+AGG | 0.631435 | 7_2:+23107025 | None:intergenic |
| GATGGTGAACCCACCAAGGG+AGG | 0.632998 | 7_2:-23105999 | Msa1053480:CDS |
| ATGCCATGACAACACCACAT+AGG | 0.641572 | 7_2:-23105553 | Msa1053480:CDS |
| ATTTGGCGTGGAAGATGGAG+CGG | 0.645210 | 7_2:-23104782 | Msa1053480:CDS |
| CAGGGATGGTGAACCCACCA+AGG | 0.647061 | 7_2:-23106003 | Msa1053480:CDS |
| GGTAATAAGTAGCACCATGG+TGG | 0.650858 | 7_2:+23104608 | None:intergenic |
| TTTGGTTCACAGAGACTGTG+GGG | 0.651010 | 7_2:+23105687 | None:intergenic |
| CAATGCTAATGATGGGATGG+TGG | 0.652306 | 7_2:-23105723 | Msa1053480:CDS |
| CCTCATTCATGGTTGATGTG+GGG | 0.657797 | 7_2:-23104732 | Msa1053480:CDS |
| ACCCTCGATTCGCTCCACCA+TGG | 0.662822 | 7_2:-23104622 | Msa1053480:CDS |
| TTGGTTCACAGAGACTGTGG+GGG | 0.663811 | 7_2:+23105688 | None:intergenic |
| ATGAGCTCATGATTAACTAG+AGG | 0.665512 | 7_2:+23105440 | None:intergenic |
| AGGGATGGTGAACCCACCAA+GGG | 0.665906 | 7_2:-23106002 | Msa1053480:CDS |
| CCAGTTCTAACCGATGAATG+GGG | 0.682383 | 7_2:-23104649 | Msa1053480:CDS |
| GGTTAGAACTGGAGTACCAG+AGG | 0.692890 | 7_2:+23104660 | None:intergenic |
| GTGTTTGTCAGGATTTGGCG+TGG | 0.696978 | 7_2:-23104794 | Msa1053480:intron |
| CCAGGTAATAAGTAGCACCA+TGG | 0.700447 | 7_2:+23104605 | None:intergenic |
| GATGACGATGATGAGTTGGG+TGG | 0.712576 | 7_2:+23105809 | None:intergenic |
| GGTGCACCGATGGTAGTGGG+AGG | 0.725348 | 7_2:+23105242 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATAATAATAAGTAGA+GGG | + | chr7_2:23103484-23103503 | None:intergenic | 10.0% |
| !! | TAAATAATAATAATAAGTAG+AGG | + | chr7_2:23103485-23103504 | None:intergenic | 10.0% |
| !!! | CATAATATTTTATTTTTTTG+TGG | + | chr7_2:23103954-23103973 | None:intergenic | 10.0% |
| !!! | TAATATTTCTATAAAACAAT+TGG | + | chr7_2:23104086-23104105 | None:intergenic | 10.0% |
| !!! | ATTTGAAAGTTTAGATTTTT+AGG | - | chr7_2:23103713-23103732 | Msa1053480:intron | 15.0% |
| !!! | TTTGAAAGTTTAGATTTTTA+GGG | - | chr7_2:23103714-23103733 | Msa1053480:intron | 15.0% |
| !! | ATTGTAATTTCTAACAATAT+CGG | - | chr7_2:23104717-23104736 | Msa1053480:CDS | 15.0% |
| !!! | TATTTTGTTTTTTCTTTTTC+AGG | - | chr7_2:23107094-23107113 | Msa1053480:CDS | 15.0% |
| !!! | TTGTTTTAATGTATACACTA+CGG | - | chr7_2:23104024-23104043 | Msa1053480:intron | 20.0% |
| !! | GAAATATTATAATACTCCAT+AGG | - | chr7_2:23104097-23104116 | Msa1053480:intron | 20.0% |
| !!! | TATAGAAGTATCATAATACT+CGG | - | chr7_2:23104264-23104283 | Msa1053480:intron | 20.0% |
| !! | TTAGAAATTACAATTTCATC+GGG | + | chr7_2:23104711-23104730 | None:intergenic | 20.0% |
| !! | GTTAGAAATTACAATTTCAT+CGG | + | chr7_2:23104712-23104731 | None:intergenic | 20.0% |
| !!! | AACTTAGTTTGAATTTTAGT+TGG | - | chr7_2:23105373-23105392 | Msa1053480:CDS | 20.0% |
| !!! | TCACATGATAATAATTTTAC+CGG | + | chr7_2:23105974-23105993 | None:intergenic | 20.0% |
| !! | GTTCAATATTAATTGTATGT+TGG | + | chr7_2:23106144-23106163 | None:intergenic | 20.0% |
| !! | AAACACAAATGTATAGTATT+TGG | - | chr7_2:23106225-23106244 | Msa1053480:intron | 20.0% |
| !! | AACACAAATGTATAGTATTT+GGG | - | chr7_2:23106226-23106245 | Msa1053480:intron | 20.0% |
| !! | AAAACATATTTACACTTCTT+AGG | + | chr7_2:23106372-23106391 | None:intergenic | 20.0% |
| !! | TATTAGAAAACATATCTTGA+GGG | + | chr7_2:23106806-23106825 | None:intergenic | 20.0% |
| !! | AAACTAATTTAAGAAAATGC+AGG | + | chr7_2:23107032-23107051 | None:intergenic | 20.0% |
| ! | TTTGATTAGATCTAACACAT+AGG | + | chr7_2:23103520-23103539 | None:intergenic | 25.0% |
| !! | TGAGTTTATAGTCATTGATT+TGG | + | chr7_2:23103566-23103585 | None:intergenic | 25.0% |
| !!! | TTTAGGTTTTTTCTATGTTG+GGG | + | chr7_2:23103681-23103700 | None:intergenic | 25.0% |
| !!! | GTTTAGGTTTTTTCTATGTT+GGG | + | chr7_2:23103682-23103701 | None:intergenic | 25.0% |
| !!! | CAAATTAAATCGATTCGTTT+AGG | + | chr7_2:23103698-23103717 | None:intergenic | 25.0% |
| ! | GCTAAAATTTGATCTATACT+CGG | - | chr7_2:23103736-23103755 | Msa1053480:intron | 25.0% |
| ! | TGAAAATATAATTGCTCGAA+CGG | + | chr7_2:23103800-23103819 | None:intergenic | 25.0% |
| !!! | TTTTATTTTTTTGTGGTGAC+CGG | + | chr7_2:23103947-23103966 | None:intergenic | 25.0% |
| ! | GCTTATAACCAATATTGTTT+AGG | - | chr7_2:23104354-23104373 | Msa1053480:intron | 25.0% |
| ! | TATAACCAATATTGTTTAGG+TGG | - | chr7_2:23104357-23104376 | Msa1053480:intron | 25.0% |
| ! | ATGAACTATGGAAGTAAAAA+TGG | - | chr7_2:23105053-23105072 | Msa1053480:intron | 25.0% |
| ! | TAATAAAACGAAATCATACC+TGG | + | chr7_2:23105567-23105586 | None:intergenic | 25.0% |
| !!! | TTTCGTTTTATTATATCCCA+CGG | - | chr7_2:23105574-23105593 | Msa1053480:CDS | 25.0% |
| ! | AAAATGTACTGTGATTACTA+AGG | - | chr7_2:23105711-23105730 | Msa1053480:CDS | 25.0% |
| ! | TAAACAAAGCAGATGTTATA+AGG | + | chr7_2:23105901-23105920 | None:intergenic | 25.0% |
| ! | ACCAGTGTATATGATTATAA+GGG | - | chr7_2:23105933-23105952 | Msa1053480:CDS | 25.0% |
| !! | AAAGAAGTGTGTTAAAAAGT+AGG | - | chr7_2:23106309-23106328 | Msa1053480:intron | 25.0% |
| ! | ATTTATAACAATGCTTGCAA+TGG | + | chr7_2:23106419-23106438 | None:intergenic | 25.0% |
| ! | ATAGTCTCTTACCATAAAAA+TGG | + | chr7_2:23106634-23106653 | None:intergenic | 25.0% |
| ! | GTATTAGAAAACATATCTTG+AGG | + | chr7_2:23106807-23106826 | None:intergenic | 25.0% |
| ! | GATATTACTATACTATCAAG+AGG | - | chr7_2:23106971-23106990 | Msa1053480:intron | 25.0% |
| !!! | CTTCCAAACACAATTTTTTT+TGG | - | chr7_2:23106999-23107018 | Msa1053480:intron | 25.0% |
| CAAAACGACTTAAATTGATG+TGG | - | chr7_2:23103596-23103615 | Msa1053480:intron | 30.0% | |
| !!! | CGTTTAGGTTTTTTCTATGT+TGG | + | chr7_2:23103683-23103702 | None:intergenic | 30.0% |
| GACAATGCATAAAATATGCA+AGG | - | chr7_2:23103906-23103925 | Msa1053480:intron | 30.0% | |
| !!! | TTTATTTTTTTGTGGTGACC+GGG | + | chr7_2:23103946-23103965 | None:intergenic | 30.0% |
| TTATCTTCATCTGTTTGCTT+TGG | + | chr7_2:23104058-23104077 | None:intergenic | 30.0% | |
| GTAAACTACAATATGACCTA+TGG | + | chr7_2:23104116-23104135 | None:intergenic | 30.0% | |
| GTAAACTTAGCATGTTTGAT+TGG | - | chr7_2:23104332-23104351 | Msa1053480:intron | 30.0% | |
| TTGAAACCAGTAAAAGACAT+TGG | + | chr7_2:23104547-23104566 | None:intergenic | 30.0% | |
| TTTGTTTGCTTCTAGACTTA+CGG | + | chr7_2:23104572-23104591 | None:intergenic | 30.0% | |
| ! | AATAAGCATCAACTTGGTTT+TGG | + | chr7_2:23104803-23104822 | None:intergenic | 30.0% |
| TGTGAAAATAAGCATCAACT+TGG | + | chr7_2:23104809-23104828 | None:intergenic | 30.0% | |
| CATTAATATGATTCTCCACA+GGG | + | chr7_2:23104881-23104900 | None:intergenic | 30.0% | |
| TCATTAATATGATTCTCCAC+AGG | + | chr7_2:23104882-23104901 | None:intergenic | 30.0% | |
| GATAAGTGATTAAACCTATG+TGG | + | chr7_2:23104933-23104952 | None:intergenic | 30.0% | |
| CATAGGTTTAATCACTTATC+TGG | - | chr7_2:23104933-23104952 | Msa1053480:intron | 30.0% | |
| ! | TTATCTGGTTTCATGAACTA+TGG | - | chr7_2:23104948-23104967 | Msa1053480:intron | 30.0% |
| !! | ATGAACTATGGAAGTGTTAA+TGG | - | chr7_2:23104960-23104979 | Msa1053480:intron | 30.0% |
| ! | TCAACATTTTGTTGAGGTAA+GGG | + | chr7_2:23105005-23105024 | None:intergenic | 30.0% |
| ! | ATCAACATTTTGTTGAGGTA+AGG | + | chr7_2:23105006-23105025 | None:intergenic | 30.0% |
| ! | CAAGAACCACAACTTAATTT+TGG | - | chr7_2:23105152-23105171 | Msa1053480:intron | 30.0% |
| ! | TACCTGGAACTCTAAATTTT+GGG | + | chr7_2:23105551-23105570 | None:intergenic | 30.0% |
| ! | ATACCTGGAACTCTAAATTT+TGG | + | chr7_2:23105552-23105571 | None:intergenic | 30.0% |
| ! | TTTTCTTTTGTGTGTTTGTC+AGG | - | chr7_2:23105664-23105683 | Msa1053480:CDS | 30.0% |
| CACCAGTGTATATGATTATA+AGG | - | chr7_2:23105932-23105951 | Msa1053480:CDS | 30.0% | |
| TCCCTTATAATCATATACAC+TGG | + | chr7_2:23105937-23105956 | None:intergenic | 30.0% | |
| AAAAGTCACAGGTTAAAGTT+CGG | - | chr7_2:23105997-23106016 | Msa1053480:CDS | 30.0% | |
| CTTCTTAGGACTTAGATAAT+TGG | + | chr7_2:23106358-23106377 | None:intergenic | 30.0% | |
| TAATCATATCACAACTCAAG+TGG | - | chr7_2:23106709-23106728 | Msa1053480:intron | 30.0% | |
| AATCATATCACAACTCAAGT+GGG | - | chr7_2:23106710-23106729 | Msa1053480:intron | 30.0% | |
| ! | AAGTGGGTGTCTATATTTTT+AGG | - | chr7_2:23106726-23106745 | Msa1053480:intron | 30.0% |
| !!! | TTTTTAGGATTTCGCAGTTT+TGG | - | chr7_2:23106741-23106760 | Msa1053480:intron | 30.0% |
| ATTGATATCATGAGTGCTTT+AGG | - | chr7_2:23106777-23106796 | Msa1053480:intron | 30.0% | |
| TTGATATCATGAGTGCTTTA+GGG | - | chr7_2:23106778-23106797 | Msa1053480:intron | 30.0% | |
| GACAGGTTATAATTGTATAG+CGG | + | chr7_2:23106829-23106848 | None:intergenic | 30.0% | |
| TATAACCTGTCTTTGTTCAA+TGG | - | chr7_2:23106838-23106857 | Msa1053480:intron | 30.0% | |
| ATCTAAATGTGCAAATGTCA+TGG | + | chr7_2:23106951-23106970 | None:intergenic | 30.0% | |
| GTGCCAAAAAAAATTGTGTT+TGG | + | chr7_2:23107005-23107024 | None:intergenic | 30.0% | |
| !!! | TGATGTGGTTTTTTCCATGA+CGG | - | chr7_2:23103611-23103630 | Msa1053480:intron | 35.0% |
| !!! | TTATTTTTTTGTGGTGACCG+GGG | + | chr7_2:23103945-23103964 | None:intergenic | 35.0% |
| CATCTCCACCTAAACAATAT+TGG | + | chr7_2:23104365-23104384 | None:intergenic | 35.0% | |
| CAATATTGTTTAGGTGGAGA+TGG | - | chr7_2:23104363-23104382 | Msa1053480:intron | 35.0% | |
| CGTGAACAATTACAAGAGTT+TGG | - | chr7_2:23104507-23104526 | Msa1053480:intron | 35.0% | |
| TTACAAGAGTTTGGTCAAGT+TGG | - | chr7_2:23104516-23104535 | Msa1053480:intron | 35.0% | |
| AATTACAATTTCATCGGGAG+AGG | + | chr7_2:23104706-23104725 | None:intergenic | 35.0% | |
| GATTCTCCAATGCTAATGAT+GGG | - | chr7_2:23104739-23104758 | Msa1053480:CDS | 35.0% | |
| ! | TTGTAAATTGGTTTCAGTCG+GGG | + | chr7_2:23104832-23104851 | None:intergenic | 35.0% |
| ! | GTTGTAAATTGGTTTCAGTC+GGG | + | chr7_2:23104833-23104852 | None:intergenic | 35.0% |
| ! | GGTTGTAAATTGGTTTCAGT+CGG | + | chr7_2:23104834-23104853 | None:intergenic | 35.0% |
| ! | GGTACATCAACATTTTGTTG+AGG | + | chr7_2:23105011-23105030 | None:intergenic | 35.0% |
| ATGAGCTCATGATTAACTAG+AGG | + | chr7_2:23105032-23105051 | None:intergenic | 35.0% | |
| ! | ATCATATCCATCATCGATTG+AGG | + | chr7_2:23105084-23105103 | None:intergenic | 35.0% |
| ! | AATTAAGTTGTGGTTCTTGC+TGG | + | chr7_2:23105151-23105170 | None:intergenic | 35.0% |
| ! | GCAACACCAAAATTAAGTTG+TGG | + | chr7_2:23105161-23105180 | None:intergenic | 35.0% |
| TGATGATCAACAATGGAGAA+TGG | + | chr7_2:23105263-23105282 | None:intergenic | 35.0% | |
| !! | TTGACGTTGATGATCAACAA+TGG | + | chr7_2:23105270-23105289 | None:intergenic | 35.0% |
| ATTGTTGATCATCAACGTCA+AGG | - | chr7_2:23105269-23105288 | Msa1053480:CDS | 35.0% | |
| !!! | TTTTTGTTGTTTCATCCGTC+TGG | + | chr7_2:23105474-23105493 | None:intergenic | 35.0% |
| TTTGTGTGTTTGTCAGGATT+TGG | - | chr7_2:23105670-23105689 | Msa1053480:CDS | 35.0% | |
| TATAAGGAAAAATACGCACC+AGG | + | chr7_2:23105885-23105904 | None:intergenic | 35.0% | |
| TCATGTGACTAAAAAGTCAC+AGG | - | chr7_2:23105986-23106005 | Msa1053480:CDS | 35.0% | |
| AAAGTCACAGGTTAAAGTTC+GGG | - | chr7_2:23105998-23106017 | Msa1053480:CDS | 35.0% | |
| ! | ATATAACCTTTTTACCCCAG+AGG | + | chr7_2:23106031-23106050 | None:intergenic | 35.0% |
| TATCTCTCTTGTTAGTGTAG+TGG | + | chr7_2:23106177-23106196 | None:intergenic | 35.0% | |
| ATGCTTGCAATGGAATAAGA+GGG | + | chr7_2:23106409-23106428 | None:intergenic | 35.0% | |
| AATGCTTGCAATGGAATAAG+AGG | + | chr7_2:23106410-23106429 | None:intergenic | 35.0% | |
| CATTGTTCACACATAACACA+TGG | - | chr7_2:23106567-23106586 | Msa1053480:intron | 35.0% | |
| TTCACACATAACACATGGAT+TGG | - | chr7_2:23106572-23106591 | Msa1053480:intron | 35.0% | |
| TCACACATAACACATGGATT+GGG | - | chr7_2:23106573-23106592 | Msa1053480:intron | 35.0% | |
| !! | TGCACATGCATCCATTTTTA+TGG | - | chr7_2:23106620-23106639 | Msa1053480:intron | 35.0% |
| CATTGCGATGTCTAAAAACA+CGG | + | chr7_2:23106689-23106708 | None:intergenic | 35.0% | |
| TGTATCCATTGAACAAAGAC+AGG | + | chr7_2:23106846-23106865 | None:intergenic | 35.0% | |
| GTAGACTTCTTGAACATGCT+AGG | + | chr7_2:23103394-23103413 | None:intergenic | 40.0% | |
| !!! | GATGTGGTTTTTTCCATGAC+GGG | - | chr7_2:23103612-23103631 | Msa1053480:intron | 40.0% |
| !!! | ATGTGGTTTTTTCCATGACG+GGG | - | chr7_2:23103613-23103632 | Msa1053480:intron | 40.0% |
| TTGTTTATATGACCCCGTCA+TGG | + | chr7_2:23103628-23103647 | None:intergenic | 40.0% | |
| ! | TGAGCTTAACTCAGTTGGTA+TGG | - | chr7_2:23103884-23103903 | Msa1053480:intron | 40.0% |
| TGCATAAAATATGCAAGGCC+CGG | - | chr7_2:23103911-23103930 | Msa1053480:intron | 40.0% | |
| !! | TGCGAATTTGTTGTGGCTTT+GGG | + | chr7_2:23104425-23104444 | None:intergenic | 40.0% |
| !! | ATGCGAATTTGTTGTGGCTT+TGG | + | chr7_2:23104426-23104445 | None:intergenic | 40.0% |
| !! | TCGAGAATGCGAATTTGTTG+TGG | + | chr7_2:23104432-23104451 | None:intergenic | 40.0% |
| !! | TCGAAGCCATTTTCAACTCA+GGG | - | chr7_2:23104448-23104467 | Msa1053480:intron | 40.0% |
| ATCTTCGTAATTTCCTCCCT+TGG | + | chr7_2:23104486-23104505 | None:intergenic | 40.0% | |
| ! | GTGATGCCAATGTCTTTTAC+TGG | - | chr7_2:23104538-23104557 | Msa1053480:intron | 40.0% |
| GTGTTTCTCGTTTCTTGTTG+TGG | + | chr7_2:23104608-23104627 | None:intergenic | 40.0% | |
| CGAGAAACACAACAAAACTC+TGG | - | chr7_2:23104618-23104637 | Msa1053480:CDS | 40.0% | |
| GAAGATGACGATGATGAGTT+GGG | + | chr7_2:23104666-23104685 | None:intergenic | 40.0% | |
| AGAAGATGACGATGATGAGT+TGG | + | chr7_2:23104667-23104686 | None:intergenic | 40.0% | |
| TCATCATCGTCATCTTCTTC+TGG | - | chr7_2:23104669-23104688 | Msa1053480:CDS | 40.0% | |
| GGATTCTCCAATGCTAATGA+TGG | - | chr7_2:23104738-23104757 | Msa1053480:CDS | 40.0% | |
| !!! | TTTTGGTTCACAGAGACTGT+GGG | + | chr7_2:23104786-23104805 | None:intergenic | 40.0% |
| ! | AAAGAGAAAAATGGGGGTGT+GGG | + | chr7_2:23104858-23104877 | None:intergenic | 40.0% |
| ACAGGGAAAGAGAAAAATGG+GGG | + | chr7_2:23104864-23104883 | None:intergenic | 40.0% | |
| CACAGGGAAAGAGAAAAATG+GGG | + | chr7_2:23104865-23104884 | None:intergenic | 40.0% | |
| CCACAGGGAAAGAGAAAAAT+GGG | + | chr7_2:23104866-23104885 | None:intergenic | 40.0% | |
| TCCACAGGGAAAGAGAAAAA+TGG | + | chr7_2:23104867-23104886 | None:intergenic | 40.0% | |
| !! | AAACCTATGTGGTGTTGTCA+TGG | + | chr7_2:23104922-23104941 | None:intergenic | 40.0% |
| TGTTAATGGAAGCTCCTCAA+TGG | - | chr7_2:23104974-23104993 | Msa1053480:intron | 40.0% | |
| CATGAGCTCATCATGAACTA+TGG | - | chr7_2:23105041-23105060 | Msa1053480:intron | 40.0% | |
| TGATCAAGAGAAGAGTCAAG+AGG | - | chr7_2:23105100-23105119 | Msa1053480:intron | 40.0% | |
| ! | TTGCGTTTGGCTTAATCAGA+AGG | + | chr7_2:23105427-23105446 | None:intergenic | 40.0% |
| ! | CACCCAAAATTTAGAGTTCC+AGG | - | chr7_2:23105546-23105565 | Msa1053480:CDS | 40.0% |
| TTCATCTCTCACATGCAACT+TGG | + | chr7_2:23105644-23105663 | None:intergenic | 40.0% | |
| AAGGATGCACGAACGTTAAA+GGG | + | chr7_2:23105763-23105782 | None:intergenic | 40.0% | |
| AAAGGATGCACGAACGTTAA+AGG | + | chr7_2:23105764-23105783 | None:intergenic | 40.0% | |
| TTTAACGTTCGTGCATCCTT+TGG | - | chr7_2:23105763-23105782 | Msa1053480:CDS | 40.0% | |
| ! | TCCAGTTCTAACCGATGAAT+GGG | - | chr7_2:23105819-23105838 | Msa1053480:CDS | 40.0% |
| ! | ATAATTTTACCGGTGCGTCA+AGG | + | chr7_2:23105964-23105983 | None:intergenic | 40.0% |
| !! | AAACAACCTCTGGGGTAAAA+AGG | - | chr7_2:23106022-23106041 | Msa1053480:CDS | 40.0% |
| TAAAACAAGACGTGCAAAGC+AGG | - | chr7_2:23106111-23106130 | Msa1053480:intron | 40.0% | |
| AGATAATTGGAGCAGTGATG+TGG | + | chr7_2:23106345-23106364 | None:intergenic | 40.0% | |
| GTAGCTAGGTATGTATAAGG+AGG | + | chr7_2:23106529-23106548 | None:intergenic | 40.0% | |
| TGGGTAGCTAGGTATGTATA+AGG | + | chr7_2:23106532-23106551 | None:intergenic | 40.0% | |
| ! | AATGACTTGTGTCCCATAGT+GGG | + | chr7_2:23106551-23106570 | None:intergenic | 40.0% |
| ! | CACACATAACACATGGATTG+GGG | - | chr7_2:23106574-23106593 | Msa1053480:intron | 40.0% |
| !! | ACACATAACACATGGATTGG+GGG | - | chr7_2:23106575-23106594 | Msa1053480:intron | 40.0% |
| TAGGATCAGTCAAGTCAAAC+TGG | + | chr7_2:23106922-23106941 | None:intergenic | 40.0% | |
| AAATGTGCAAATGTCATGGC+AGG | + | chr7_2:23106947-23106966 | None:intergenic | 40.0% | |
| TGGCTTCCTCGAACAAACAT+TGG | - | chr7_2:23103368-23103387 | Msa1053480:intron | 45.0% | |
| TCCAACCAACGGAATTCTCA+AGG | - | chr7_2:23103421-23103440 | Msa1053480:intron | 45.0% | |
| CAGTTAAGAGAGACGAGTTG+AGG | + | chr7_2:23103447-23103466 | None:intergenic | 45.0% | |
| CTCAACTCGTCTCTCTTAAC+TGG | - | chr7_2:23103445-23103464 | Msa1053480:intron | 45.0% | |
| TCTATGTTGGGGACATACAC+TGG | + | chr7_2:23103670-23103689 | None:intergenic | 45.0% | |
| CATCGTGAGCTTAACTCAGT+TGG | - | chr7_2:23103879-23103898 | Msa1053480:intron | 45.0% | |
| GCATAAAATATGCAAGGCCC+GGG | - | chr7_2:23103912-23103931 | Msa1053480:intron | 45.0% | |
| CATAAAATATGCAAGGCCCG+GGG | - | chr7_2:23103913-23103932 | Msa1053480:intron | 45.0% | |
| !! | TTCCATCTTGGCTTTGGTTC+TGG | + | chr7_2:23104402-23104421 | None:intergenic | 45.0% |
| ! | TTTGGGTTCCATCTTGGCTT+TGG | + | chr7_2:23104408-23104427 | None:intergenic | 45.0% |
| !! | CTCGAAGCCATTTTCAACTC+AGG | - | chr7_2:23104447-23104466 | Msa1053480:intron | 45.0% |
| !! | AGCCATTTTCAACTCAGGGA+TGG | - | chr7_2:23104452-23104471 | Msa1053480:intron | 45.0% |
| ! | CACCATCCCTGAGTTGAAAA+TGG | + | chr7_2:23104457-23104476 | None:intergenic | 45.0% |
| TCGTAATTTCCTCCCTTGGT+GGG | + | chr7_2:23104482-23104501 | None:intergenic | 45.0% | |
| TTCGTAATTTCCTCCCTTGG+TGG | + | chr7_2:23104483-23104502 | None:intergenic | 45.0% | |
| ! | CTCCAATGCTAATGATGGGA+TGG | - | chr7_2:23104743-23104762 | Msa1053480:CDS | 45.0% |
| CACCATCCCATCATTAGCAT+TGG | + | chr7_2:23104748-23104767 | None:intergenic | 45.0% | |
| ! | CAATGCTAATGATGGGATGG+TGG | - | chr7_2:23104746-23104765 | Msa1053480:CDS | 45.0% |
| ! | TTTGGTTCACAGAGACTGTG+GGG | + | chr7_2:23104785-23104804 | None:intergenic | 45.0% |
| !!! | GTTTTGGTTCACAGAGACTG+TGG | + | chr7_2:23104787-23104806 | None:intergenic | 45.0% |
| GAAAGAGAAAAATGGGGGTG+TGG | + | chr7_2:23104859-23104878 | None:intergenic | 45.0% | |
| !! | CCCATTTTTCTCTTTCCCTG+TGG | - | chr7_2:23104863-23104882 | Msa1053480:intron | 45.0% |
| !! | TGTGGTGTTGTCATGGCATT+AGG | + | chr7_2:23104915-23104934 | None:intergenic | 45.0% |
| ATGCCATGACAACACCACAT+AGG | - | chr7_2:23104916-23104935 | Msa1053480:intron | 45.0% | |
| AGGTAAGGGTTGAACCATTG+AGG | + | chr7_2:23104991-23105010 | None:intergenic | 45.0% | |
| GGAATCTCCTCAATCGATGA+TGG | - | chr7_2:23105074-23105093 | Msa1053480:intron | 45.0% | |
| ATGGAGAATGGAACAGCAAC+AGG | + | chr7_2:23105251-23105270 | None:intergenic | 45.0% | |
| !!! | CGGCTTGGTAATTTTGCGTT+TGG | + | chr7_2:23105440-23105459 | None:intergenic | 45.0% |
| !! | TCCGTCTGGTTCTCAAAAAG+CGG | + | chr7_2:23105460-23105479 | None:intergenic | 45.0% |
| TACTAAGGACGCCTCATTCA+TGG | - | chr7_2:23105726-23105745 | Msa1053480:CDS | 45.0% | |
| ! | GCCTCATTCATGGTTGATGT+GGG | - | chr7_2:23105736-23105755 | Msa1053480:CDS | 45.0% |
| ! | CCTCATTCATGGTTGATGTG+GGG | - | chr7_2:23105737-23105756 | Msa1053480:CDS | 45.0% |
| ! | CTCCAGTTCTAACCGATGAA+TGG | - | chr7_2:23105818-23105837 | Msa1053480:CDS | 45.0% |
| ! | CCAGTTCTAACCGATGAATG+GGG | - | chr7_2:23105820-23105839 | Msa1053480:CDS | 45.0% |
| GGTAATAAGTAGCACCATGG+TGG | + | chr7_2:23105864-23105883 | None:intergenic | 45.0% | |
| CCAGGTAATAAGTAGCACCA+TGG | + | chr7_2:23105867-23105886 | None:intergenic | 45.0% | |
| !! | CCATGGTGCTACTTATTACC+TGG | - | chr7_2:23105864-23105883 | Msa1053480:CDS | 45.0% |
| AAGTTCGGGAAAACAACCTC+TGG | - | chr7_2:23106012-23106031 | Msa1053480:CDS | 45.0% | |
| AGTTCGGGAAAACAACCTCT+GGG | - | chr7_2:23106013-23106032 | Msa1053480:CDS | 45.0% | |
| ACATACCTAGCTACCCACTA+TGG | - | chr7_2:23106535-23106554 | Msa1053480:intron | 45.0% | |
| CATACCTAGCTACCCACTAT+GGG | - | chr7_2:23106536-23106555 | Msa1053480:intron | 45.0% | |
| ! | CAATGACTTGTGTCCCATAG+TGG | + | chr7_2:23106552-23106571 | None:intergenic | 45.0% |
| !! | CACATAACACATGGATTGGG+GGG | - | chr7_2:23106576-23106595 | Msa1053480:intron | 45.0% |
| AGATCGTTGTATCGAGCAGT+TGG | + | chr7_2:23106660-23106679 | None:intergenic | 45.0% | |
| AATAACCACGCTTTAGCACC+TGG | - | chr7_2:23106867-23106886 | Msa1053480:intron | 45.0% | |
| !!! | TATATTTGTAATTTTTTTAA+GGG | + | chr7_2:23105522-23105541 | None:intergenic | 5.0% |
| !!! | ATATATTTGTAATTTTTTTA+AGG | + | chr7_2:23105523-23105542 | None:intergenic | 5.0% |
| !! | TATATAACTATTTATTTAAT+TGG | - | chr7_2:23106046-23106065 | Msa1053480:CDS | 5.0% |
| GCTAGGCCAATGTTTGTTCG+AGG | + | chr7_2:23103377-23103396 | None:intergenic | 50.0% | |
| CTACCAATGCGTCCAACCAA+CGG | - | chr7_2:23103410-23103429 | Msa1053480:intron | 50.0% | |
| ! | ATTCCGTTGGTTGGACGCAT+TGG | + | chr7_2:23103416-23103435 | None:intergenic | 50.0% |
| GCCTTGAGAATTCCGTTGGT+TGG | + | chr7_2:23103425-23103444 | None:intergenic | 50.0% | |
| TGAGGCCTTGAGAATTCCGT+TGG | + | chr7_2:23103429-23103448 | None:intergenic | 50.0% | |
| CTCCAGAACCAAAGCCAAGA+TGG | - | chr7_2:23104397-23104416 | Msa1053480:intron | 50.0% | |
| !! | TGTGGCTTTGGGTTCCATCT+TGG | + | chr7_2:23104414-23104433 | None:intergenic | 50.0% |
| ! | GATGACGATGATGAGTTGGG+TGG | + | chr7_2:23104663-23104682 | None:intergenic | 50.0% |
| TTGGTTCACAGAGACTGTGG+GGG | + | chr7_2:23104784-23104803 | None:intergenic | 50.0% | |
| GGGTGTGGGTGGTTGTAAAT+TGG | + | chr7_2:23104844-23104863 | None:intergenic | 50.0% | |
| ! | CTGGTTCTCAAAAAGCGGCT+TGG | + | chr7_2:23105455-23105474 | None:intergenic | 50.0% |
| !!! | GCCGCTTTTTGAGAACCAGA+CGG | - | chr7_2:23105456-23105475 | Msa1053480:CDS | 50.0% |
| GTGTTTGTCAGGATTTGGCG+TGG | - | chr7_2:23105675-23105694 | Msa1053480:CDS | 50.0% | |
| TCAGGATTTGGCGTGGAAGA+TGG | - | chr7_2:23105682-23105701 | Msa1053480:CDS | 50.0% | |
| ATTTGGCGTGGAAGATGGAG+CGG | - | chr7_2:23105687-23105706 | Msa1053480:CDS | 50.0% | |
| ! | CGCCTCATTCATGGTTGATG+TGG | - | chr7_2:23105735-23105754 | Msa1053480:CDS | 50.0% |
| CCCCACATCAACCATGAATG+AGG | + | chr7_2:23105740-23105759 | None:intergenic | 50.0% | |
| GAGAACTGCTCGATCTCCAA+AGG | + | chr7_2:23105782-23105801 | None:intergenic | 50.0% | |
| GCAGTTCTCTTTGACTCCTC+TGG | - | chr7_2:23105793-23105812 | Msa1053480:CDS | 50.0% | |
| ! | GGTTAGAACTGGAGTACCAG+AGG | + | chr7_2:23105812-23105831 | None:intergenic | 50.0% |
| ! | CCCCATTCATCGGTTAGAAC+TGG | + | chr7_2:23105823-23105842 | None:intergenic | 50.0% |
| GAGGGTAACACCCCATTCAT+CGG | + | chr7_2:23105833-23105852 | None:intergenic | 50.0% | |
| GTTCGGGAAAACAACCTCTG+GGG | - | chr7_2:23106014-23106033 | Msa1053480:CDS | 50.0% | |
| TTGGGGGGATTCCTCATAGT+TGG | - | chr7_2:23106591-23106610 | Msa1053480:intron | 50.0% | |
| TTGTACCAGGTGCTAAAGCG+TGG | + | chr7_2:23106875-23106894 | None:intergenic | 50.0% | |
| !! | TGGTGCTTGCTGTTGCACTA+GGG | + | chr7_2:23106902-23106921 | None:intergenic | 50.0% |
| GCAAATGTCATGGCAGGAGT+AGG | + | chr7_2:23106941-23106960 | None:intergenic | 50.0% | |
| AGGGATGGTGAACCCACCAA+GGG | - | chr7_2:23104467-23104486 | Msa1053480:intron | 55.0% | |
| ! | GAGAAAAATGGGGGTGTGGG+TGG | + | chr7_2:23104855-23104874 | None:intergenic | 55.0% |
| CCTCTTCCTCCCACTACCAT+CGG | - | chr7_2:23105221-23105240 | Msa1053480:intron | 55.0% | |
| ! | ACAGGTGCACCGATGGTAGT+GGG | + | chr7_2:23105233-23105252 | None:intergenic | 55.0% |
| ! | AACAGGTGCACCGATGGTAG+TGG | + | chr7_2:23105234-23105253 | None:intergenic | 55.0% |
| AACAGCAACAGGTGCACCGA+TGG | + | chr7_2:23105240-23105259 | None:intergenic | 55.0% | |
| ! | ACCATGGTGGAGCGAATCGA+GGG | + | chr7_2:23105851-23105870 | None:intergenic | 55.0% |
| AGGGAAAAGCCTTGACGCAC+CGG | - | chr7_2:23105952-23105971 | Msa1053480:CDS | 55.0% | |
| !! | GTGTCCCATAGTGGGTAGCT+AGG | + | chr7_2:23106543-23106562 | None:intergenic | 55.0% |
| GTGCAGCAGCACCAACTATG+AGG | + | chr7_2:23106605-23106624 | None:intergenic | 55.0% | |
| !! | GGTGCTTGCTGTTGCACTAG+GGG | + | chr7_2:23106901-23106920 | None:intergenic | 55.0% |
| !! | CTGGTGCTTGCTGTTGCACT+AGG | + | chr7_2:23106903-23106922 | None:intergenic | 55.0% |
| CAGGGATGGTGAACCCACCA+AGG | - | chr7_2:23104466-23104485 | Msa1053480:intron | 60.0% | |
| GATGGTGAACCCACCAAGGG+AGG | - | chr7_2:23104470-23104489 | Msa1053480:intron | 60.0% | |
| !! | CCGATGGTAGTGGGAGGAAG+AGG | + | chr7_2:23105224-23105243 | None:intergenic | 60.0% |
| ! | ACCCTCGATTCGCTCCACCA+TGG | - | chr7_2:23105847-23105866 | Msa1053480:CDS | 60.0% |
| ! | CACCATGGTGGAGCGAATCG+AGG | + | chr7_2:23105852-23105871 | None:intergenic | 60.0% |
| GCACTAGGGGTCGTTGTACC+AGG | + | chr7_2:23106888-23106907 | None:intergenic | 60.0% | |
| AAGGCCCGGGGTTCAAACCC+CGG | - | chr7_2:23103925-23103944 | Msa1053480:intron | 65.0% | |
| GTGACCGGGGTTTGAACCCC+GGG | + | chr7_2:23103932-23103951 | None:intergenic | 65.0% | |
| GGTGACCGGGGTTTGAACCC+CGG | + | chr7_2:23103933-23103952 | None:intergenic | 65.0% | |
| !! | GGTGCACCGATGGTAGTGGG+AGG | + | chr7_2:23105230-23105249 | None:intergenic | 65.0% |
| TGCGCATTGCACGCGTCCGT+GGG | + | chr7_2:23105593-23105612 | None:intergenic | 65.0% | |
| TTGCGCATTGCACGCGTCCG+TGG | + | chr7_2:23105594-23105613 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 23103367 | 23107124 | 23103367 | ID=Msa1053480;Name=Msa1053480 |
| chr7_2 | mRNA | 23103367 | 23107124 | 23103367 | ID=Msa1053480-mRNA-1;Parent=Msa1053480;Name=Msa1053480-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|0.75|1|1|4|0|391 |
| chr7_2 | exon | 23107025 | 23107124 | 23107025 | ID=Msa1053480-mRNA-1:exon:5211;Parent=Msa1053480-mRNA-1 |
| chr7_2 | exon | 23105249 | 23106115 | 23105249 | ID=Msa1053480-mRNA-1:exon:5210;Parent=Msa1053480-mRNA-1 |
| chr7_2 | exon | 23104606 | 23104805 | 23104606 | ID=Msa1053480-mRNA-1:exon:5209;Parent=Msa1053480-mRNA-1 |
| chr7_2 | exon | 23103367 | 23103375 | 23103367 | ID=Msa1053480-mRNA-1:exon:5208;Parent=Msa1053480-mRNA-1 |
| chr7_2 | CDS | 23107025 | 23107124 | 23107025 | ID=Msa1053480-mRNA-1:cds;Parent=Msa1053480-mRNA-1 |
| chr7_2 | CDS | 23105249 | 23106115 | 23105249 | ID=Msa1053480-mRNA-1:cds;Parent=Msa1053480-mRNA-1 |
| chr7_2 | CDS | 23104606 | 23104805 | 23104606 | ID=Msa1053480-mRNA-1:cds;Parent=Msa1053480-mRNA-1 |
| chr7_2 | CDS | 23103367 | 23103375 | 23103367 | ID=Msa1053480-mRNA-1:cds;Parent=Msa1053480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
