Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1054060 | AES78253.1 | 84.157 | 587 | 54 | 5 | 1 | 548 | 16 | 602 | 0.0 | 931 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1054060 | sp|Q9ZWJ9|ARR2_ARATH | 36.797 | 231 | 111 | 5 | 2 | 203 | 54 | 278 | 2.39e-40 | 158 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1054060 | G7L033 | 84.157 | 587 | 54 | 5 | 1 | 548 | 16 | 602 | 0.0 | 931 |
Gene ID | Type | Classification |
---|---|---|
Msa1054060 | TR | Others |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1054060 | MtrunA17_Chr7g0223971 | 78.185 | 518 | 41 | 6 | 54 | 499 | 1 | 518 | 0.0 | 731 |
Msa1054060 | MtrunA17_Chr6g0473731 | 48.363 | 397 | 164 | 11 | 52 | 427 | 10 | 386 | 5.85e-95 | 296 |
Msa1054060 | MtrunA17_Chr7g0223991 | 66.162 | 198 | 47 | 5 | 202 | 382 | 24 | 218 | 4.51e-73 | 232 |
Msa1054060 | MtrunA17_Chr4g0067981 | 37.559 | 213 | 108 | 3 | 2 | 191 | 61 | 271 | 1.36e-39 | 153 |
Msa1054060 | MtrunA17_Chr2g0294911 | 38.756 | 209 | 109 | 3 | 2 | 191 | 59 | 267 | 2.97e-39 | 151 |
Msa1054060 | MtrunA17_Chr1g0149841 | 36.744 | 215 | 113 | 2 | 2 | 193 | 35 | 249 | 1.34e-38 | 148 |
Msa1054060 | MtrunA17_Chr1g0161431 | 33.871 | 248 | 124 | 6 | 2 | 214 | 41 | 283 | 1.45e-38 | 149 |
Msa1054060 | MtrunA17_Chr8g0376881 | 34.728 | 239 | 131 | 4 | 2 | 215 | 55 | 293 | 2.08e-37 | 145 |
Msa1054060 | MtrunA17_Chr3g0137101 | 31.818 | 308 | 139 | 7 | 2 | 250 | 38 | 333 | 2.48e-36 | 143 |
Msa1054060 | MtrunA17_Chr3g0123131 | 34.298 | 242 | 122 | 4 | 2 | 213 | 43 | 277 | 4.84e-36 | 141 |
Msa1054060 | MtrunA17_Chr4g0009981 | 37.017 | 181 | 106 | 3 | 17 | 195 | 2 | 176 | 1.19e-34 | 131 |
Msa1054060 | MtrunA17_Chr4g0009851 | 37.705 | 183 | 102 | 3 | 17 | 195 | 55 | 229 | 2.07e-34 | 132 |
Msa1054060 | MtrunA17_Chr4g0009901 | 37.234 | 188 | 110 | 2 | 4 | 191 | 45 | 224 | 2.19e-34 | 131 |
Msa1054060 | MtrunA17_Chr7g0275401 | 37.850 | 214 | 109 | 3 | 2 | 191 | 35 | 248 | 1.17e-33 | 129 |
Msa1054060 | MtrunA17_Chr6g0471041 | 37.379 | 206 | 104 | 3 | 2 | 197 | 44 | 234 | 2.12e-33 | 132 |
Msa1054060 | MtrunA17_Chr7g0275891 | 33.333 | 228 | 116 | 4 | 2 | 193 | 35 | 262 | 4.49e-33 | 129 |
Msa1054060 | MtrunA17_Chr2g0304841 | 33.475 | 236 | 121 | 4 | 2 | 202 | 48 | 282 | 1.72e-31 | 129 |
Msa1054060 | MtrunA17_Chr4g0074411 | 32.411 | 253 | 130 | 5 | 2 | 213 | 48 | 300 | 2.17e-31 | 128 |
Msa1054060 | MtrunA17_Chr3g0134481 | 34.595 | 185 | 82 | 2 | 2 | 186 | 38 | 183 | 2.68e-31 | 120 |
Msa1054060 | MtrunA17_Chr1g0149851 | 33.772 | 228 | 113 | 3 | 2 | 191 | 35 | 262 | 2.20e-30 | 125 |
Msa1054060 | MtrunA17_Chr3g0134461 | 36.413 | 184 | 87 | 3 | 2 | 184 | 38 | 192 | 7.70e-30 | 116 |
Msa1054060 | MtrunA17_Chr4g0074401 | 31.839 | 223 | 129 | 2 | 2 | 201 | 47 | 269 | 3.02e-28 | 119 |
Msa1054060 | MtrunA17_Chr4g0074421 | 35.294 | 187 | 103 | 3 | 21 | 189 | 1 | 187 | 2.38e-26 | 106 |
Msa1054060 | MtrunA17_Chr1g0149831 | 34.426 | 183 | 94 | 3 | 34 | 193 | 4 | 183 | 1.47e-25 | 105 |
Msa1054060 | MtrunA17_Chr4g0009991 | 38.333 | 120 | 69 | 2 | 65 | 184 | 2 | 116 | 2.05e-20 | 87.0 |
Msa1054060 | MtrunA17_Chr4g0031961 | 42.453 | 106 | 48 | 3 | 112 | 210 | 101 | 200 | 1.44e-18 | 86.7 |
Msa1054060 | MtrunA17_Chr4g0011071 | 30.556 | 144 | 88 | 3 | 22 | 161 | 39 | 174 | 2.64e-18 | 82.8 |
Msa1054060 | MtrunA17_Chr7g0255711 | 49.296 | 71 | 36 | 0 | 124 | 194 | 80 | 150 | 2.69e-18 | 85.9 |
Msa1054060 | MtrunA17_Chr8g0391911 | 29.268 | 205 | 113 | 6 | 22 | 199 | 58 | 257 | 6.54e-17 | 80.9 |
Msa1054060 | MtrunA17_Chr4g0040481 | 61.111 | 54 | 21 | 0 | 134 | 187 | 157 | 210 | 5.86e-15 | 77.0 |
Msa1054060 | MtrunA17_Chr2g0324891 | 61.111 | 54 | 21 | 0 | 134 | 187 | 160 | 213 | 1.48e-14 | 75.9 |
Msa1054060 | MtrunA17_Chr5g0400241 | 53.333 | 60 | 28 | 0 | 134 | 193 | 310 | 369 | 5.19e-14 | 74.7 |
Msa1054060 | MtrunA17_Chr4g0054981 | 50.794 | 63 | 31 | 0 | 134 | 196 | 309 | 371 | 5.71e-14 | 74.7 |
Msa1054060 | MtrunA17_Chr8g0383961 | 29.016 | 193 | 101 | 6 | 2 | 191 | 44 | 203 | 8.22e-14 | 71.6 |
Msa1054060 | MtrunA17_Chr6g0469321 | 62.791 | 43 | 16 | 0 | 151 | 193 | 70 | 112 | 6.13e-12 | 64.3 |
Msa1054060 | MtrunA17_Chr5g0417521 | 54.545 | 55 | 24 | 1 | 135 | 188 | 15 | 69 | 9.99e-12 | 66.6 |
Msa1054060 | MtrunA17_Chr6g0461641 | 54.545 | 55 | 24 | 1 | 135 | 188 | 42 | 96 | 1.40e-11 | 66.6 |
Msa1054060 | MtrunA17_Chr2g0321461 | 50.909 | 55 | 26 | 1 | 135 | 188 | 45 | 99 | 7.27e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1054060 | AT3G16857.3 | 35.470 | 234 | 104 | 3 | 11 | 203 | 2 | 229 | 7.59e-41 | 156 |
Msa1054060 | AT3G16857.1 | 34.979 | 243 | 111 | 3 | 2 | 203 | 63 | 299 | 7.79e-41 | 157 |
Msa1054060 | AT3G16857.2 | 34.836 | 244 | 112 | 3 | 2 | 204 | 63 | 300 | 9.59e-41 | 157 |
Msa1054060 | AT5G07210.2 | 35.338 | 266 | 121 | 7 | 2 | 218 | 42 | 305 | 6.97e-38 | 148 |
Msa1054060 | AT5G07210.1 | 35.338 | 266 | 121 | 7 | 2 | 218 | 50 | 313 | 1.03e-37 | 147 |
Msa1054060 | AT2G01760.1 | 33.632 | 223 | 112 | 4 | 2 | 191 | 37 | 256 | 3.11e-35 | 136 |
Msa1054060 | AT2G25180.1 | 37.441 | 211 | 113 | 3 | 2 | 193 | 43 | 253 | 4.06e-35 | 139 |
Msa1054060 | AT2G01760.2 | 33.482 | 224 | 113 | 4 | 1 | 191 | 64 | 284 | 7.83e-35 | 136 |
Msa1054060 | AT4G31920.1 | 37.681 | 207 | 116 | 3 | 2 | 198 | 43 | 246 | 5.29e-34 | 136 |
Msa1054060 | AT2G27070.1 | 33.835 | 266 | 125 | 7 | 2 | 218 | 45 | 308 | 2.48e-32 | 131 |
Msa1054060 | AT5G58080.1 | 29.641 | 334 | 178 | 10 | 2 | 284 | 44 | 371 | 7.35e-31 | 127 |
Msa1054060 | AT1G67710.1 | 34.061 | 229 | 123 | 4 | 2 | 202 | 37 | 265 | 1.01e-30 | 126 |
Msa1054060 | AT2G01760.3 | 32.990 | 194 | 94 | 4 | 31 | 191 | 1 | 191 | 5.18e-29 | 117 |
Msa1054060 | AT3G62670.1 | 32.353 | 204 | 120 | 5 | 2 | 187 | 65 | 268 | 2.19e-25 | 109 |
Msa1054060 | AT1G67710.2 | 34.010 | 197 | 102 | 4 | 34 | 202 | 4 | 200 | 4.83e-25 | 108 |
Msa1054060 | AT5G49240.1 | 30.244 | 205 | 121 | 3 | 2 | 184 | 68 | 272 | 1.28e-23 | 101 |
Msa1054060 | AT1G49190.1 | 30.909 | 220 | 120 | 5 | 2 | 192 | 60 | 276 | 8.34e-22 | 98.2 |
Msa1054060 | AT1G67710.3 | 33.889 | 180 | 91 | 4 | 51 | 202 | 12 | 191 | 2.22e-20 | 94.4 |
Msa1054060 | AT3G10760.1 | 47.887 | 71 | 37 | 0 | 124 | 194 | 94 | 164 | 2.14e-18 | 87.0 |
Msa1054060 | AT5G59570.2 | 38.261 | 115 | 58 | 3 | 91 | 194 | 88 | 200 | 4.25e-18 | 85.5 |
Msa1054060 | AT5G59570.1 | 38.261 | 115 | 58 | 3 | 91 | 194 | 88 | 200 | 4.25e-18 | 85.5 |
Msa1054060 | AT5G05090.1 | 49.275 | 69 | 35 | 0 | 123 | 191 | 69 | 137 | 4.40e-18 | 84.7 |
Msa1054060 | AT2G40970.1 | 50.725 | 69 | 34 | 0 | 126 | 194 | 96 | 164 | 4.88e-18 | 84.3 |
Msa1054060 | AT3G46640.2 | 46.341 | 82 | 44 | 0 | 131 | 212 | 140 | 221 | 6.07e-18 | 85.5 |
Msa1054060 | AT3G46640.1 | 46.341 | 82 | 44 | 0 | 131 | 212 | 140 | 221 | 6.07e-18 | 85.5 |
Msa1054060 | AT3G46640.3 | 46.341 | 82 | 44 | 0 | 131 | 212 | 140 | 221 | 8.99e-18 | 85.1 |
Msa1054060 | AT5G44190.1 | 62.295 | 61 | 21 | 1 | 127 | 187 | 141 | 199 | 1.37e-16 | 82.4 |
Msa1054060 | AT5G44190.2 | 62.295 | 61 | 21 | 1 | 127 | 187 | 141 | 199 | 1.54e-16 | 81.6 |
Msa1054060 | AT2G20570.1 | 59.259 | 54 | 22 | 0 | 134 | 187 | 152 | 205 | 3.59e-14 | 75.1 |
Msa1054060 | AT2G20570.2 | 60.784 | 51 | 20 | 0 | 137 | 187 | 171 | 221 | 1.85e-13 | 73.2 |
Msa1054060 | AT4G18020.8 | 36.792 | 106 | 59 | 2 | 91 | 196 | 260 | 357 | 2.47e-13 | 72.8 |
Msa1054060 | AT4G18020.11 | 36.792 | 106 | 59 | 2 | 91 | 196 | 260 | 357 | 2.47e-13 | 72.8 |
Msa1054060 | AT4G18020.4 | 36.792 | 106 | 59 | 2 | 91 | 196 | 260 | 357 | 2.47e-13 | 72.8 |
Msa1054060 | AT4G18020.5 | 36.792 | 106 | 59 | 2 | 91 | 196 | 260 | 357 | 2.47e-13 | 72.8 |
Msa1054060 | AT4G18020.10 | 36.792 | 106 | 59 | 2 | 91 | 196 | 260 | 357 | 2.47e-13 | 72.8 |
Msa1054060 | AT4G18020.7 | 36.792 | 106 | 59 | 2 | 91 | 196 | 260 | 357 | 2.47e-13 | 72.8 |
Msa1054060 | AT4G18020.3 | 36.792 | 106 | 59 | 2 | 91 | 196 | 260 | 357 | 3.11e-13 | 72.8 |
Msa1054060 | AT4G18020.2 | 36.792 | 106 | 59 | 2 | 91 | 196 | 260 | 357 | 3.11e-13 | 72.8 |
Msa1054060 | AT4G18020.1 | 36.792 | 106 | 59 | 2 | 91 | 196 | 260 | 357 | 3.11e-13 | 72.8 |
Msa1054060 | AT4G18020.6 | 36.792 | 106 | 59 | 2 | 91 | 196 | 260 | 357 | 3.11e-13 | 72.8 |
Msa1054060 | AT4G18020.9 | 36.792 | 106 | 59 | 2 | 91 | 196 | 260 | 357 | 3.11e-13 | 72.8 |
Msa1054060 | AT3G04450.3 | 52.632 | 57 | 26 | 1 | 132 | 187 | 235 | 291 | 1.31e-11 | 66.2 |
Msa1054060 | AT3G04450.1 | 46.479 | 71 | 31 | 2 | 132 | 195 | 235 | 305 | 2.05e-11 | 66.6 |
Msa1054060 | AT3G04450.4 | 46.479 | 71 | 31 | 2 | 132 | 195 | 195 | 265 | 2.16e-11 | 66.2 |
Msa1054060 | AT3G04450.2 | 46.479 | 71 | 31 | 2 | 132 | 195 | 195 | 265 | 2.16e-11 | 66.2 |
Msa1054060 | AT1G49190.2 | 26.812 | 138 | 94 | 2 | 2 | 139 | 60 | 190 | 2.66e-11 | 66.6 |
Msa1054060 | AT5G29000.1 | 40.506 | 79 | 46 | 1 | 132 | 209 | 185 | 263 | 3.09e-11 | 65.9 |
Msa1054060 | AT5G29000.3 | 40.506 | 79 | 46 | 1 | 132 | 209 | 185 | 263 | 3.09e-11 | 65.9 |
Msa1054060 | AT5G29000.2 | 40.506 | 79 | 46 | 1 | 132 | 209 | 228 | 306 | 3.25e-11 | 65.9 |
Msa1054060 | AT5G29000.4 | 44.286 | 70 | 38 | 1 | 132 | 200 | 228 | 297 | 3.36e-11 | 65.1 |
Msa1054060 | AT3G04030.1 | 52.727 | 55 | 25 | 1 | 135 | 188 | 45 | 99 | 4.18e-11 | 65.5 |
Msa1054060 | AT3G04030.3 | 52.727 | 55 | 25 | 1 | 135 | 188 | 45 | 99 | 4.41e-11 | 65.5 |
Find 87 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGAAGATTTCAAAGATATT+TGG | 0.138269 | 7_2:-25111342 | Msa1054060:CDS |
CAACAATTCTGATTACTTAA+TGG | 0.142693 | 7_2:-25109024 | Msa1054060:CDS |
AAATTCTAACTTTGGATCTT+TGG | 0.211667 | 7_2:-25109474 | Msa1054060:CDS |
GAACTATGAATAATGGATTA+AGG | 0.228641 | 7_2:-25109352 | Msa1054060:CDS |
CAATTCCCTTATATACAAAA+AGG | 0.231143 | 7_2:-25109770 | Msa1054060:CDS |
CCAATGGGGAACCATCTAAT+AGG | 0.237832 | 7_2:-25108398 | Msa1054060:CDS |
ATTGATCTTTAATATGCTTT+TGG | 0.238095 | 7_2:+25112188 | None:intergenic |
ACTTACTTTCCAATCCAATT+TGG | 0.246719 | 7_2:+25111104 | None:intergenic |
CTGCTTGCTATTAACCAAAT+TGG | 0.262572 | 7_2:-25111118 | Msa1054060:CDS |
AACTTGTGAGGCATAATATT+AGG | 0.274422 | 7_2:+25109446 | None:intergenic |
AAATGTAGCAAGTCACTTAC+AGG | 0.277878 | 7_2:-25110207 | Msa1054060:intron |
AGGGTTGGCTCTTCAAGATT+TGG | 0.280377 | 7_2:-25109750 | Msa1054060:CDS |
GTGACACACTTACTTATTAT+AGG | 0.282733 | 7_2:+25112157 | None:intergenic |
CAAAGCATGACGAGCATCTT+TGG | 0.288698 | 7_2:+25112291 | None:intergenic |
CAACATGATGTGTTGGAAAT+TGG | 0.289454 | 7_2:+25109795 | None:intergenic |
ATCTCAAAGACGCTAGAAAA+TGG | 0.291584 | 7_2:-25111397 | Msa1054060:CDS |
ACTTACTTATTATAGGTATC+TGG | 0.300133 | 7_2:+25112164 | None:intergenic |
TTAAGAAACAAAAGCTTGTT+TGG | 0.309580 | 7_2:-25111165 | Msa1054060:CDS |
GGAACCATCTAATAGGGTTT+TGG | 0.309810 | 7_2:-25108391 | Msa1054060:CDS |
TTGAAATCTTCAGCACAAAA+AGG | 0.310653 | 7_2:+25111352 | None:intergenic |
ATTAACGCAGGAATTTGATA+TGG | 0.312906 | 7_2:-25108240 | Msa1054060:intron |
TTTGGAATTCAGCTGAATAA+TGG | 0.314909 | 7_2:-25109395 | Msa1054060:intron |
GGAATTGGAACTATGAATAA+TGG | 0.315352 | 7_2:-25109359 | Msa1054060:CDS |
TTTACTCAACATAACTTAGA+TGG | 0.318423 | 7_2:-25109122 | Msa1054060:CDS |
AAAGGGGTCAAAATGAAAAT+AGG | 0.325029 | 7_2:-25109292 | Msa1054060:CDS |
TTCAAGATTTGGAACAAGTT+AGG | 0.330501 | 7_2:-25109739 | Msa1054060:CDS |
AGATATTTGGAAATATGTTA+TGG | 0.355548 | 7_2:-25111329 | Msa1054060:CDS |
CAATGGGGAACCATCTAATA+GGG | 0.355670 | 7_2:-25108397 | Msa1054060:CDS |
GGCTGTTCCAAAGAAAATTC+TGG | 0.359742 | 7_2:-25110261 | Msa1054060:CDS |
AACTATGAATAATGGATTAA+GGG | 0.363152 | 7_2:-25109351 | Msa1054060:CDS |
TTTCATCTGGTGGGAATGAA+TGG | 0.366419 | 7_2:-25112220 | Msa1054060:CDS |
GATCTTGTTGAAGCCTTGTT+TGG | 0.371084 | 7_2:-25108218 | Msa1054060:CDS |
ACTTGTGAGGCATAATATTA+GGG | 0.374491 | 7_2:+25109447 | None:intergenic |
GGTTTGGTTCAAGGAGGGTT+TGG | 0.375726 | 7_2:-25109239 | Msa1054060:CDS |
TGCTATTAACCAAATTGGAT+TGG | 0.390260 | 7_2:-25111113 | Msa1054060:CDS |
CGTTATTGCAGAATTTCATC+TGG | 0.397811 | 7_2:-25112233 | Msa1054060:CDS |
CCTCCCAAAACCCTATTAGA+TGG | 0.398250 | 7_2:+25108387 | None:intergenic |
GGTGCAGAAATGGTTGGAAT+TGG | 0.421087 | 7_2:-25109374 | Msa1054060:CDS |
TAGAGGAGAACAAGGATTGA+TGG | 0.421210 | 7_2:-25109570 | Msa1054060:CDS |
GCCTTGTTTGGTACTATTGA+AGG | 0.422983 | 7_2:-25108206 | Msa1054060:CDS |
GTGTTGGAAATTGGTTGAAA+TGG | 0.423793 | 7_2:+25109804 | None:intergenic |
ATCACTCTTCAAGAAAATGA+AGG | 0.424779 | 7_2:-25112268 | Msa1054060:CDS |
CTGCGAGATGTTGAAGAGAA+AGG | 0.429447 | 7_2:-25109998 | Msa1054060:CDS |
CAGTGATGTCTGAAGACAAT+AGG | 0.437039 | 7_2:-25111429 | Msa1054060:CDS |
CTTCTTCAAGTTTGTTAACA+AGG | 0.448083 | 7_2:-25109541 | Msa1054060:CDS |
GGTTCAAGGAGGGTTTGGTC+TGG | 0.452214 | 7_2:-25109234 | Msa1054060:CDS |
AGCGTCTTTGAGATTAAACT+TGG | 0.469430 | 7_2:+25111406 | None:intergenic |
TGTTTGGTACTATTGAAGGC+TGG | 0.484902 | 7_2:-25108202 | Msa1054060:CDS |
GATTTGGAACAAGTTAGGCT+TGG | 0.484973 | 7_2:-25109734 | Msa1054060:CDS |
ATGTAGTTGCGAGGAAAAGA+AGG | 0.486560 | 7_2:-25108426 | Msa1054060:intron |
AACTTAGATGGAAATGTTGT+GGG | 0.487865 | 7_2:-25109110 | Msa1054060:CDS |
GCTGAATAATGGTGCAGAAA+TGG | 0.488210 | 7_2:-25109384 | Msa1054060:CDS |
TCTGATGTTAAGGGAGGGAG+TGG | 0.490167 | 7_2:-25109203 | Msa1054060:intron |
TTCATCTGGTGGGAATGAAT+GGG | 0.491841 | 7_2:-25112219 | Msa1054060:CDS |
GTTGAAGAGAAAGGAATGGT+TGG | 0.491902 | 7_2:-25109989 | Msa1054060:CDS |
CTTGAATATCTCTCTCTCCT+TGG | 0.495918 | 7_2:+25111191 | None:intergenic |
TAGTGCTACTTTCACTAATG+AGG | 0.497764 | 7_2:-25109069 | Msa1054060:CDS |
CCTATTAGATGGTTCCCCAT+TGG | 0.510141 | 7_2:+25108398 | None:intergenic |
GTGGGATCAGTTAATAATGA+AGG | 0.513684 | 7_2:-25109167 | Msa1054060:CDS |
TAACTTAGATGGAAATGTTG+TGG | 0.515281 | 7_2:-25109111 | Msa1054060:CDS |
GACATTAGAAACCAGAATCA+TGG | 0.525782 | 7_2:-25109503 | Msa1054060:CDS |
ATTGCAGAATTTCATCTGGT+GGG | 0.533922 | 7_2:-25112229 | Msa1054060:CDS |
TTCTTCAAGTTTGTTAACAA+GGG | 0.536372 | 7_2:-25109540 | Msa1054060:CDS |
ACTTCAATATTTGCAAACAC+TGG | 0.542849 | 7_2:-25109861 | Msa1054060:CDS |
AGCTAGTGGAAGCACCATCA+TGG | 0.545478 | 7_2:+25109603 | None:intergenic |
TATTGCAGAATTTCATCTGG+TGG | 0.554479 | 7_2:-25112230 | Msa1054060:CDS |
AATAATGGTGCAGAAATGGT+TGG | 0.561015 | 7_2:-25109380 | Msa1054060:CDS |
TCTATATGATGAAAAGCTAG+TGG | 0.562508 | 7_2:+25109589 | None:intergenic |
GAAGAGAAAGGAATGGTTGG+AGG | 0.566539 | 7_2:-25109986 | Msa1054060:CDS |
TGGTACTATTGAAGGCTGGA+GGG | 0.569657 | 7_2:-25108198 | Msa1054060:CDS |
GTTTGCAAATATTGAAGTGT+TGG | 0.578096 | 7_2:+25109866 | None:intergenic |
TTGGTACTATTGAAGGCTGG+AGG | 0.585411 | 7_2:-25108199 | Msa1054060:CDS |
AAAGTCTTCATACCTCGTTA+CGG | 0.588578 | 7_2:+25108985 | None:intergenic |
TCATCATATAGAGGAGAACA+AGG | 0.594028 | 7_2:-25109578 | Msa1054060:CDS |
AATTGGTCAACATGATGTGT+TGG | 0.598362 | 7_2:+25109788 | None:intergenic |
ACTTACTAGATTAGTAGCTG+AGG | 0.603964 | 7_2:+25108344 | None:intergenic |
AGAAAGAGTAAAGAATGCCA+AGG | 0.604346 | 7_2:-25111208 | Msa1054060:CDS |
ATTTCTCTGATCACAGAACT+CGG | 0.612627 | 7_2:+25109920 | None:intergenic |
CAAACAAGAGGTGCAAACAA+TGG | 0.617503 | 7_2:-25109833 | Msa1054060:CDS |
GAGTGGAAAAGAGTTTCTAG+TGG | 0.618626 | 7_2:-25109186 | Msa1054060:CDS |
GCCTTCAATAGTACCAAACA+AGG | 0.631580 | 7_2:+25108205 | None:intergenic |
TTATGTGATATGTAGTTGCG+AGG | 0.631887 | 7_2:-25108435 | Msa1054060:intron |
AGTGGAAAAGAGTTTCTAGT+GGG | 0.650658 | 7_2:-25109185 | Msa1054060:CDS |
ACACTGGCATATCAAACAAG+AGG | 0.654807 | 7_2:-25109845 | Msa1054060:CDS |
AGATGTTGAAGAGAAAGGAA+TGG | 0.660542 | 7_2:-25109993 | Msa1054060:CDS |
ACATCAGAAGTAAACTTGTG+AGG | 0.669577 | 7_2:+25109434 | None:intergenic |
TGACAAGAATCTCCGTAACG+AGG | 0.706301 | 7_2:-25108997 | Msa1054060:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAAATAAATTTCTTTTAC+AGG | + | chr7_2:25109021-25109040 | None:intergenic | 10.0% |
!! | GTAAAAGAAATTTATTTAAA+AGG | - | chr7_2:25109021-25109040 | Msa1054060:CDS | 10.0% |
!!! | TTTTGATAAATAATTTATAG+GGG | - | chr7_2:25110403-25110422 | Msa1054060:intron | 10.0% |
!! | TTTAATAAAGTTATATAAAG+TGG | - | chr7_2:25110454-25110473 | Msa1054060:intron | 10.0% |
!!! | TAAAAATATTTTCTTATGAA+AGG | - | chr7_2:25111090-25111109 | Msa1054060:intron | 10.0% |
!!! | ATATTATTTTAAAATGATAG+TGG | + | chr7_2:25111300-25111319 | None:intergenic | 10.0% |
!! | AATATTAAAATTTGGATAAT+AGG | + | chr7_2:25111769-25111788 | None:intergenic | 10.0% |
!! | TGTGTATTAATATTAAAATT+TGG | + | chr7_2:25111777-25111796 | None:intergenic | 10.0% |
!! | TGATGATATTAAAATATTAT+TGG | + | chr7_2:25112011-25112030 | None:intergenic | 10.0% |
!! | TTAGATATATTTATTTATCA+AGG | + | chr7_2:25113883-25113902 | None:intergenic | 10.0% |
!! | CATAAATGATAAGAAAAAAA+TGG | - | chr7_2:25108627-25108646 | Msa1054060:intron | 15.0% |
!!! | ATTTTTTTCACCTTATATAA+GGG | - | chr7_2:25108979-25108998 | Msa1054060:intron | 15.0% |
!!! | TTTATTTAAAAGGAGTATTA+AGG | - | chr7_2:25109031-25109050 | Msa1054060:CDS | 15.0% |
!! | GAAAAGTAAAAAAACTAAAA+TGG | + | chr7_2:25109462-25109481 | None:intergenic | 15.0% |
!! | TTATTCACAAAATGTATTTA+AGG | + | chr7_2:25109712-25109731 | None:intergenic | 15.0% |
!! | ATATTATATAGAAATTACTG+AGG | + | chr7_2:25110243-25110262 | None:intergenic | 15.0% |
!!! | TATAATATTTTTGTGTCATT+TGG | - | chr7_2:25110255-25110274 | Msa1054060:CDS | 15.0% |
!! | TATAAACAACTTTAATAAGT+TGG | - | chr7_2:25110493-25110512 | Msa1054060:intron | 15.0% |
!! | TATTACTAGTATATTTACTT+AGG | + | chr7_2:25111555-25111574 | None:intergenic | 15.0% |
!!! | CATTTTTTTCACCTTATATA+AGG | - | chr7_2:25108978-25108997 | Msa1054060:intron | 20.0% |
!! | AATTAAATCAAGAAACAAGT+AGG | + | chr7_2:25109343-25109362 | None:intergenic | 20.0% |
!!! | AATATATTTTTGCATGTTAC+TGG | + | chr7_2:25109768-25109787 | None:intergenic | 20.0% |
!! | ACATGCAAAAATATATTTCA+TGG | - | chr7_2:25109771-25109790 | Msa1054060:CDS | 20.0% |
!!! | ATTGATCTTTAATATGCTTT+TGG | + | chr7_2:25109979-25109998 | None:intergenic | 20.0% |
!! | AACAAGTAAGTATTAAAAAC+TGG | + | chr7_2:25110087-25110106 | None:intergenic | 20.0% |
!!! | ACTGGATTTCTAAAATAAAT+GGG | + | chr7_2:25110182-25110201 | None:intergenic | 20.0% |
!!! | AACTGGATTTCTAAAATAAA+TGG | + | chr7_2:25110183-25110202 | None:intergenic | 20.0% |
!! | AGATATTTGGAAATATGTTA+TGG | - | chr7_2:25110835-25110854 | Msa1054060:intron | 20.0% |
!! | TACACTTATTACTTACAATA+TGG | + | chr7_2:25111140-25111159 | None:intergenic | 20.0% |
!! | AATATAAATGGTCATTTACA+TGG | - | chr7_2:25111315-25111334 | Msa1054060:CDS | 20.0% |
!!! | GATAATAGGTAATTTGTATT+TGG | + | chr7_2:25111755-25111774 | None:intergenic | 20.0% |
!! | AATTCCCTTATATACAAAAA+GGG | - | chr7_2:25112395-25112414 | Msa1054060:intron | 20.0% |
!!! | TTAACAAGGGATTTTAAATT+TGG | - | chr7_2:25112637-25112656 | Msa1054060:intron | 20.0% |
!!! | AACTATGAATAATGGATTAA+GGG | - | chr7_2:25112813-25112832 | Msa1054060:intron | 20.0% |
!!! | TCTTTTGTGAATGAAAATTT+TGG | - | chr7_2:25112904-25112923 | Msa1054060:intron | 20.0% |
!! | TTTCACTAGATATATAAAAG+TGG | - | chr7_2:25113310-25113329 | Msa1054060:intron | 20.0% |
!! | ATATTAACATAGATAAGTGT+TGG | + | chr7_2:25113494-25113513 | None:intergenic | 20.0% |
!! | ACTTATCTATGTTAATATGA+TGG | - | chr7_2:25113496-25113515 | Msa1054060:intron | 20.0% |
!! | CTTAAAAGAAACTATTAGTT+AGG | + | chr7_2:25113544-25113563 | None:intergenic | 20.0% |
!!! | TAAGCATTTTTGAAGAATTA+GGG | + | chr7_2:25113589-25113608 | None:intergenic | 20.0% |
!!! | ATAAGCATTTTTGAAGAATT+AGG | + | chr7_2:25113590-25113609 | None:intergenic | 20.0% |
!!! | TACAAAGACATTTTTTTGTG+GGG | + | chr7_2:25108570-25108589 | None:intergenic | 25.0% |
!!! | CTACAAAGACATTTTTTTGT+GGG | + | chr7_2:25108571-25108590 | None:intergenic | 25.0% |
! | CTTATCATTTATGAAAATGC+CGG | + | chr7_2:25108620-25108639 | None:intergenic | 25.0% |
! | TGATAAGAAAAAAATGGTGA+TGG | - | chr7_2:25108633-25108652 | Msa1054060:intron | 25.0% |
!! | ACTCAATAAGGTTGATTAAT+GGG | - | chr7_2:25108731-25108750 | Msa1054060:intron | 25.0% |
!!! | AAAGTATTGAGACAATCAAA+AGG | + | chr7_2:25108954-25108973 | None:intergenic | 25.0% |
! | AAACATACATCCCTTATATA+AGG | + | chr7_2:25108992-25109011 | None:intergenic | 25.0% |
! | CAAATCAAAATAACTTGACA+AGG | - | chr7_2:25109059-25109078 | Msa1054060:CDS | 25.0% |
! | GATAGTTTATAACAAATCTC+AGG | + | chr7_2:25109418-25109437 | None:intergenic | 25.0% |
!!! | ATGCATTTGATTTTGTATTC+AGG | - | chr7_2:25109666-25109685 | Msa1054060:intron | 25.0% |
! | AAAGAATTTAATGAGGCATA+AGG | + | chr7_2:25109743-25109762 | None:intergenic | 25.0% |
! | ACTGGAAAAAGAATTTAATG+AGG | + | chr7_2:25109750-25109769 | None:intergenic | 25.0% |
! | TGCAAAAATATATTTCATGG+TGG | - | chr7_2:25109774-25109793 | Msa1054060:CDS | 25.0% |
! | ACTTACTTATTATAGGTATC+TGG | + | chr7_2:25110003-25110022 | None:intergenic | 25.0% |
! | TTATTATGCAAACATGCTTA+AGG | - | chr7_2:25110106-25110125 | Msa1054060:intron | 25.0% |
! | AGGTTAAGATAATAAAGAAC+TGG | + | chr7_2:25110200-25110219 | None:intergenic | 25.0% |
!! | TATTTTTCATGAGAATCGTA+AGG | + | chr7_2:25110220-25110239 | None:intergenic | 25.0% |
!! | TGTCATTTGGATAGATAATT+TGG | - | chr7_2:25110268-25110287 | Msa1054060:intron | 25.0% |
!!! | AGACATTATTTGTGTCATTT+TGG | - | chr7_2:25110368-25110387 | Msa1054060:intron | 25.0% |
! | ATAATGCATAAGAACTAAAG+TGG | + | chr7_2:25110684-25110703 | None:intergenic | 25.0% |
! | CTGAAGATTTCAAAGATATT+TGG | - | chr7_2:25110822-25110841 | Msa1054060:intron | 25.0% |
!! | TTAAGAAACAAAAGCTTGTT+TGG | - | chr7_2:25110999-25111018 | Msa1054060:intron | 25.0% |
!! | AGAAACATTTTGTGAAGATA+AGG | + | chr7_2:25111028-25111047 | None:intergenic | 25.0% |
! | CAGACAATACTATAGAAAAA+TGG | + | chr7_2:25111189-25111208 | None:intergenic | 25.0% |
!! | ATTTTACGACCATATCATAT+GGG | - | chr7_2:25111340-25111359 | Msa1054060:CDS | 25.0% |
! | NNNNNNNNNGTGCTAGCTAA+CGG | + | chr7_2:25111408-25111427 | None:intergenic | 25.0% |
!! | TTATATTTTCCCTAATTCAG+AGG | - | chr7_2:25111882-25111901 | Msa1054060:intron | 25.0% |
!! | CTTTTTGTATATAAGGGAAT+TGG | + | chr7_2:25112396-25112415 | None:intergenic | 25.0% |
! | CAATTCCCTTATATACAAAA+AGG | - | chr7_2:25112394-25112413 | Msa1054060:intron | 25.0% |
!! | TTTTTGCTTGAAAAAAAGGA+AGG | + | chr7_2:25112534-25112553 | None:intergenic | 25.0% |
!!! | GAGTTTTTTGCTTGAAAAAA+AGG | + | chr7_2:25112538-25112557 | None:intergenic | 25.0% |
!!! | TTCTTCAAGTTTGTTAACAA+GGG | - | chr7_2:25112624-25112643 | Msa1054060:intron | 25.0% |
!! | AATTTTTAACACCATGATTC+TGG | + | chr7_2:25112675-25112694 | None:intergenic | 25.0% |
! | GGTGTTAAAAATTCTAACTT+TGG | - | chr7_2:25112682-25112701 | Msa1054060:intron | 25.0% |
! | AAATTCTAACTTTGGATCTT+TGG | - | chr7_2:25112690-25112709 | Msa1054060:intron | 25.0% |
!! | GTAAGAAACAATAACCATTT+TGG | - | chr7_2:25112751-25112770 | Msa1054060:intron | 25.0% |
!!! | GAACTATGAATAATGGATTA+AGG | - | chr7_2:25112812-25112831 | Msa1054060:intron | 25.0% |
!!! | TGTGAATGAAAATTTTGGTT+TGG | - | chr7_2:25112909-25112928 | Msa1054060:intron | 25.0% |
!!! | GATTCTATTTCTGATGTTAA+GGG | - | chr7_2:25112952-25112971 | Msa1054060:intron | 25.0% |
! | TTTACTCAACATAACTTAGA+TGG | - | chr7_2:25113042-25113061 | Msa1054060:intron | 25.0% |
! | CAACAATTCTGATTACTTAA+TGG | - | chr7_2:25113140-25113159 | Msa1054060:intron | 25.0% |
!!! | GAGTTTTTGTTTGAACTTAT+TGG | + | chr7_2:25113388-25113407 | None:intergenic | 25.0% |
! | TGGTTTAACATAGATACATA+GGG | + | chr7_2:25113474-25113493 | None:intergenic | 25.0% |
! | TTGGTTTAACATAGATACAT+AGG | + | chr7_2:25113475-25113494 | None:intergenic | 25.0% |
! | TATGATGGTCATAATGTAAT+TGG | - | chr7_2:25113511-25113530 | Msa1054060:intron | 25.0% |
!! | ATTTTACCTAATATTAACGC+AGG | - | chr7_2:25113912-25113931 | Msa1054060:intron | 25.0% |
AAACCAATCTGAAGAGAAAT+CGG | - | chr7_2:25108272-25108291 | Msa1054060:intron | 30.0% | |
!!! | CCTACAAAGACATTTTTTTG+TGG | + | chr7_2:25108572-25108591 | None:intergenic | 30.0% |
CCACAAAAAAATGTCTTTGT+AGG | - | chr7_2:25108569-25108588 | Msa1054060:intron | 30.0% | |
! | GACTCAATAAGGTTGATTAA+TGG | - | chr7_2:25108730-25108749 | Msa1054060:intron | 30.0% |
GAGACAATCAAAAGGTTTAA+AGG | + | chr7_2:25108946-25108965 | None:intergenic | 30.0% | |
GGAATATAACTCCAATAGTA+AGG | - | chr7_2:25109084-25109103 | Msa1054060:CDS | 30.0% | |
ATTCAAGTATTCCTATTGAG+TGG | + | chr7_2:25109129-25109148 | None:intergenic | 30.0% | |
! | TTTTTATCGTTTCCAATGGA+AGG | + | chr7_2:25109152-25109171 | None:intergenic | 30.0% |
!!! | ACTGTTTTTATCGTTTCCAA+TGG | + | chr7_2:25109156-25109175 | None:intergenic | 30.0% |
AAATCAAGAAACAAGTAGGA+AGG | + | chr7_2:25109339-25109358 | None:intergenic | 30.0% | |
! | AGATTGAGTGTTATTAAGCA+AGG | + | chr7_2:25109534-25109553 | None:intergenic | 30.0% |
! | ATACTTTTGTCTCACAATCA+AGG | - | chr7_2:25109562-25109581 | Msa1054060:CDS | 30.0% |
!!! | GATTTTTTTTAGCCAAAGAG+TGG | + | chr7_2:25109595-25109614 | None:intergenic | 30.0% |
AAAACAAACTACTGGAGTAT+AGG | + | chr7_2:25109628-25109647 | None:intergenic | 30.0% | |
TATAGAGGAAAACAAACTAC+TGG | + | chr7_2:25109636-25109655 | None:intergenic | 30.0% | |
TACAAAATCAAATGCATGTC+TGG | + | chr7_2:25109663-25109682 | None:intergenic | 30.0% | |
ATCACTCTTCAAGAAAATGA+AGG | - | chr7_2:25109896-25109915 | Msa1054060:CDS | 30.0% | |
GTGACACACTTACTTATTAT+AGG | + | chr7_2:25110010-25110029 | None:intergenic | 30.0% | |
!! | TTGTTTTTCTTTGCATGCAT+AGG | - | chr7_2:25110056-25110075 | Msa1054060:intron | 30.0% |
! | TGTTTTTCTTTGCATGCATA+GGG | - | chr7_2:25110057-25110076 | Msa1054060:intron | 30.0% |
TTTAGTGCACCTATCAATTT+AGG | + | chr7_2:25110141-25110160 | None:intergenic | 30.0% | |
AAGAAGCTTAAAGAACTGTA+TGG | + | chr7_2:25110604-25110623 | None:intergenic | 30.0% | |
TTGAAATCTTCAGCACAAAA+AGG | + | chr7_2:25110815-25110834 | None:intergenic | 30.0% | |
TGCTATTAACCAAATTGGAT+TGG | - | chr7_2:25111051-25111070 | Msa1054060:intron | 30.0% | |
ACTTACTTTCCAATCCAATT+TGG | + | chr7_2:25111063-25111082 | None:intergenic | 30.0% | |
TACTTCTTCCAACCATAAAT+CGG | - | chr7_2:25111158-25111177 | Msa1054060:CDS | 30.0% | |
! | TAAGTATGTTGCATTGATAG+CGG | + | chr7_2:25111238-25111257 | None:intergenic | 30.0% |
CTATCAATGCAACATACTTA+AGG | - | chr7_2:25111238-25111257 | Msa1054060:CDS | 30.0% | |
! | CATTTTACGACCATATCATA+TGG | - | chr7_2:25111339-25111358 | Msa1054060:CDS | 30.0% |
AGTTCAAATCCCATATGATA+TGG | + | chr7_2:25111352-25111371 | None:intergenic | 30.0% | |
! | GTTTAACTTTGTAACCTTGA+CGG | + | chr7_2:25111379-25111398 | None:intergenic | 30.0% |
ACACCACTATCATTGTTTAT+AGG | - | chr7_2:25111529-25111548 | Msa1054060:intron | 30.0% | |
! | TACCCCTAAAATTAAGTTGT+TGG | - | chr7_2:25111813-25111832 | Msa1054060:intron | 30.0% |
! | AGCCAACAACTTAATTTTAG+GGG | + | chr7_2:25111818-25111837 | None:intergenic | 30.0% |
! | GAGCCAACAACTTAATTTTA+GGG | + | chr7_2:25111819-25111838 | None:intergenic | 30.0% |
! | AGAGCCAACAACTTAATTTT+AGG | + | chr7_2:25111820-25111839 | None:intergenic | 30.0% |
! | ATGATCTCCAGAATTTTCTT+TGG | + | chr7_2:25111913-25111932 | None:intergenic | 30.0% |
AAGACAACGACAAAAATTAG+AGG | + | chr7_2:25112070-25112089 | None:intergenic | 30.0% | |
TCAGAGAAATCGAAGAAAAA+AGG | - | chr7_2:25112257-25112276 | Msa1054060:CDS | 30.0% | |
GTTTGCAAATATTGAAGTGT+TGG | + | chr7_2:25112301-25112320 | None:intergenic | 30.0% | |
ACTTCAATATTTGCAAACAC+TGG | - | chr7_2:25112303-25112322 | Msa1054060:CDS | 30.0% | |
! | CCAACCCTTTTTGTATATAA+GGG | + | chr7_2:25112402-25112421 | None:intergenic | 30.0% |
! | TTCAAGATTTGGAACAAGTT+AGG | - | chr7_2:25112425-25112444 | Msa1054060:intron | 30.0% |
TCTATATGATGAAAAGCTAG+TGG | + | chr7_2:25112578-25112597 | None:intergenic | 30.0% | |
!!! | ACTAGCTTTTCATCATATAG+AGG | - | chr7_2:25112577-25112596 | Msa1054060:intron | 30.0% |
!! | CTTCTTCAAGTTTGTTAACA+AGG | - | chr7_2:25112623-25112642 | Msa1054060:intron | 30.0% |
ACTTGTGAGGCATAATATTA+GGG | + | chr7_2:25112720-25112739 | None:intergenic | 30.0% | |
AACTTGTGAGGCATAATATT+AGG | + | chr7_2:25112721-25112740 | None:intergenic | 30.0% | |
TATTCAGCTGAATTCCAAAA+TGG | + | chr7_2:25112768-25112787 | None:intergenic | 30.0% | |
! | TTTGGAATTCAGCTGAATAA+TGG | - | chr7_2:25112769-25112788 | Msa1054060:intron | 30.0% |
GGAATTGGAACTATGAATAA+TGG | - | chr7_2:25112805-25112824 | Msa1054060:intron | 30.0% | |
! | ATAGTTTTTGCTTCAACGAA+AGG | - | chr7_2:25112854-25112873 | Msa1054060:intron | 30.0% |
! | TAGTTTTTGCTTCAACGAAA+GGG | - | chr7_2:25112855-25112874 | Msa1054060:intron | 30.0% |
AAAGGGGTCAAAATGAAAAT+AGG | - | chr7_2:25112872-25112891 | Msa1054060:intron | 30.0% | |
!!! | GAAAATTTTGGTTTGGTTCA+AGG | - | chr7_2:25112916-25112935 | Msa1054060:intron | 30.0% |
!! | GGATTCTATTTCTGATGTTA+AGG | - | chr7_2:25112951-25112970 | Msa1054060:intron | 30.0% |
TAACTTAGATGGAAATGTTG+TGG | - | chr7_2:25113053-25113072 | Msa1054060:intron | 30.0% | |
AACTTAGATGGAAATGTTGT+GGG | - | chr7_2:25113054-25113073 | Msa1054060:intron | 30.0% | |
AAGTTCAAACAAAAACTCAC+AGG | - | chr7_2:25113390-25113409 | Msa1054060:intron | 30.0% | |
TAACATAGATACATAGGGAA+AGG | + | chr7_2:25113469-25113488 | None:intergenic | 30.0% | |
AAACCTCAGAAACATTCTAT+TGG | + | chr7_2:25113706-25113725 | None:intergenic | 30.0% | |
! | GAAAAGAAGGATTTTCCAAT+GGG | - | chr7_2:25113751-25113770 | Msa1054060:intron | 30.0% |
! | AAAAGAAGGATTTTCCAATG+GGG | - | chr7_2:25113752-25113771 | Msa1054060:intron | 30.0% |
CAAATTCCTGCGTTAATATT+AGG | + | chr7_2:25113921-25113940 | None:intergenic | 30.0% | |
ATTAACGCAGGAATTTGATA+TGG | - | chr7_2:25113924-25113943 | Msa1054060:intron | 30.0% | |
! | TGGCAAGATGATGTTCTTTT+GGG | + | chr7_2:25108223-25108242 | None:intergenic | 35.0% |
! | ATGGCAAGATGATGTTCTTT+TGG | + | chr7_2:25108224-25108243 | None:intergenic | 35.0% |
AAAGAAACCTCTTTCCACTA+AGG | - | chr7_2:25108309-25108328 | Msa1054060:intron | 35.0% | |
! | CAACGACGTCTTGTAATTTT+GGG | + | chr7_2:25108365-25108384 | None:intergenic | 35.0% |
! | ACAACGACGTCTTGTAATTT+TGG | + | chr7_2:25108366-25108385 | None:intergenic | 35.0% |
!!! | AAAGACATTTTTTTGTGGGG+AGG | + | chr7_2:25108567-25108586 | None:intergenic | 35.0% |
ATTTATGAAAATGCCGGTGA+AGG | + | chr7_2:25108614-25108633 | None:intergenic | 35.0% | |
AATAGATTTGTGAGTCTTGG+GGG | + | chr7_2:25108691-25108710 | None:intergenic | 35.0% | |
CAATAGATTTGTGAGTCTTG+GGG | + | chr7_2:25108692-25108711 | None:intergenic | 35.0% | |
CCAATAGATTTGTGAGTCTT+GGG | + | chr7_2:25108693-25108712 | None:intergenic | 35.0% | |
ACCAATAGATTTGTGAGTCT+TGG | + | chr7_2:25108694-25108713 | None:intergenic | 35.0% | |
!! | GTCTCAAGTTCTAGAAGAAT+GGG | - | chr7_2:25108753-25108772 | Msa1054060:intron | 35.0% |
! | TCTTCTCCTTTCAAGTATCT+AGG | + | chr7_2:25108798-25108817 | None:intergenic | 35.0% |
! | ATGTAGACGACTCTTTTCTT+AGG | + | chr7_2:25108854-25108873 | None:intergenic | 35.0% |
TTTGCTAAGAGTTTCCTTGT+GGG | + | chr7_2:25108882-25108901 | None:intergenic | 35.0% | |
! | TTTTGCTAAGAGTTTCCTTG+TGG | + | chr7_2:25108883-25108902 | None:intergenic | 35.0% |
AAAATTAACCCACAGACTAG+AGG | - | chr7_2:25108899-25108918 | Msa1054060:intron | 35.0% | |
TCAAAATAACTTGACAAGGC+AGG | - | chr7_2:25109063-25109082 | Msa1054060:CDS | 35.0% | |
GTTGTTCAACACCTTACTAT+TGG | + | chr7_2:25109098-25109117 | None:intergenic | 35.0% | |
GAATACTTGAATCCTTCCAT+TGG | - | chr7_2:25109137-25109156 | Msa1054060:CDS | 35.0% | |
AGTTCAAAAGAGCAAATGCA+TGG | - | chr7_2:25109173-25109192 | Msa1054060:CDS | 35.0% | |
GTTCAAAAGAGCAAATGCAT+GGG | - | chr7_2:25109174-25109193 | Msa1054060:CDS | 35.0% | |
CAAGGAAATATTCCACTCTT+TGG | - | chr7_2:25109580-25109599 | Msa1054060:CDS | 35.0% | |
! | CTGGAGTATAGGCTTTTTAA+TGG | + | chr7_2:25109617-25109636 | None:intergenic | 35.0% |
AAATCAAATGCATGTCTGGT+AGG | + | chr7_2:25109659-25109678 | None:intergenic | 35.0% | |
CGTTATTGCAGAATTTCATC+TGG | - | chr7_2:25109931-25109950 | Msa1054060:intron | 35.0% | |
TATTGCAGAATTTCATCTGG+TGG | - | chr7_2:25109934-25109953 | Msa1054060:intron | 35.0% | |
ATTGCAGAATTTCATCTGGT+GGG | - | chr7_2:25109935-25109954 | Msa1054060:intron | 35.0% | |
TGCAAACATGCTTAAGGATT+CGG | - | chr7_2:25110112-25110131 | Msa1054060:intron | 35.0% | |
TGCATAAGAACTAAAGTGGT+GGG | + | chr7_2:25110680-25110699 | None:intergenic | 35.0% | |
ATGCATAAGAACTAAAGTGG+TGG | + | chr7_2:25110681-25110700 | None:intergenic | 35.0% | |
!! | AGCGTCTTTGAGATTAAACT+TGG | + | chr7_2:25110761-25110780 | None:intergenic | 35.0% |
ATCTCAAAGACGCTAGAAAA+TGG | - | chr7_2:25110767-25110786 | Msa1054060:intron | 35.0% | |
! | CAATGCTTCTTTTCGTTCTT+AGG | + | chr7_2:25110932-25110951 | None:intergenic | 35.0% |
AGAAAGAGTAAAGAATGCCA+AGG | - | chr7_2:25110956-25110975 | Msa1054060:intron | 35.0% | |
!! | CTGCTTGCTATTAACCAAAT+TGG | - | chr7_2:25111046-25111065 | Msa1054060:intron | 35.0% |
AGGCCTATAAACAATGATAG+TGG | + | chr7_2:25111535-25111554 | None:intergenic | 35.0% | |
AAATGTAGCAAGTCACTTAC+AGG | - | chr7_2:25111957-25111976 | Msa1054060:intron | 35.0% | |
AGATGTTGAAGAGAAAGGAA+TGG | - | chr7_2:25112171-25112190 | Msa1054060:CDS | 35.0% | |
! | CTAAGATCAAGTTTTGCATC+AGG | - | chr7_2:25112217-25112236 | Msa1054060:CDS | 35.0% |
ATTTCTCTGATCACAGAACT+CGG | + | chr7_2:25112247-25112266 | None:intergenic | 35.0% | |
GTGTTGGAAATTGGTTGAAA+TGG | + | chr7_2:25112363-25112382 | None:intergenic | 35.0% | |
CAACATGATGTGTTGGAAAT+TGG | + | chr7_2:25112372-25112391 | None:intergenic | 35.0% | |
AATTGGTCAACATGATGTGT+TGG | + | chr7_2:25112379-25112398 | None:intergenic | 35.0% | |
CCCTTATATACAAAAAGGGT+TGG | - | chr7_2:25112399-25112418 | Msa1054060:intron | 35.0% | |
! | GCCAACCCTTTTTGTATATA+AGG | + | chr7_2:25112403-25112422 | None:intergenic | 35.0% |
TAGGCTTGGAAAATCAAAGT+TGG | - | chr7_2:25112444-25112463 | Msa1054060:intron | 35.0% | |
ATTATTCTCCGCAACAACAT+CGG | + | chr7_2:25112473-25112492 | None:intergenic | 35.0% | |
GCAAAAAACTCATTCCATGA+TGG | - | chr7_2:25112547-25112566 | Msa1054060:intron | 35.0% | |
TCATCATATAGAGGAGAACA+AGG | - | chr7_2:25112586-25112605 | Msa1054060:intron | 35.0% | |
GACATTAGAAACCAGAATCA+TGG | - | chr7_2:25112661-25112680 | Msa1054060:intron | 35.0% | |
ACATCAGAAGTAAACTTGTG+AGG | + | chr7_2:25112733-25112752 | None:intergenic | 35.0% | |
AATAATGGTGCAGAAATGGT+TGG | - | chr7_2:25112784-25112803 | Msa1054060:intron | 35.0% | |
! | AGTTTTTGCTTCAACGAAAG+GGG | - | chr7_2:25112856-25112875 | Msa1054060:intron | 35.0% |
!!! | AATTTTGGTTTGGTTCAAGG+AGG | - | chr7_2:25112919-25112938 | Msa1054060:intron | 35.0% |
!!! | ATTTTGGTTTGGTTCAAGGA+GGG | - | chr7_2:25112920-25112939 | Msa1054060:intron | 35.0% |
!! | TCTATTTCTGATGTTAAGGG+AGG | - | chr7_2:25112955-25112974 | Msa1054060:intron | 35.0% |
!! | CTATTTCTGATGTTAAGGGA+GGG | - | chr7_2:25112956-25112975 | Msa1054060:intron | 35.0% |
!! | AGTGGAAAAGAGTTTCTAGT+GGG | - | chr7_2:25112979-25112998 | Msa1054060:intron | 35.0% |
GTGGGATCAGTTAATAATGA+AGG | - | chr7_2:25112997-25113016 | Msa1054060:intron | 35.0% | |
!! | TAGTGCTACTTTCACTAATG+AGG | - | chr7_2:25113095-25113114 | Msa1054060:intron | 35.0% |
TGGTCATAATGTAATTGGAG+AGG | - | chr7_2:25113516-25113535 | Msa1054060:intron | 35.0% | |
! | GAACCAATAGAATGTTTCTG+AGG | - | chr7_2:25113700-25113719 | Msa1054060:intron | 35.0% |
TTATGTGATATGTAGTTGCG+AGG | - | chr7_2:25113729-25113748 | Msa1054060:intron | 35.0% | |
! | GGAAAAGAAGGATTTTCCAA+TGG | - | chr7_2:25113750-25113769 | Msa1054060:intron | 35.0% |
! | GAACCATCTAATAGGGTTTT+GGG | - | chr7_2:25113774-25113793 | Msa1054060:intron | 35.0% |
ACTTACTAGATTAGTAGCTG+AGG | + | chr7_2:25113823-25113842 | None:intergenic | 35.0% | |
!! | AAGATGATGTTCTTTTGGGG+GGG | + | chr7_2:25108219-25108238 | None:intergenic | 40.0% |
! | CAAGATGATGTTCTTTTGGG+GGG | + | chr7_2:25108220-25108239 | None:intergenic | 40.0% |
! | GCAAGATGATGTTCTTTTGG+GGG | + | chr7_2:25108221-25108240 | None:intergenic | 40.0% |
! | GGCAAGATGATGTTCTTTTG+GGG | + | chr7_2:25108222-25108241 | None:intergenic | 40.0% |
TTGTCTCAAGTGGTTCAAGA+TGG | + | chr7_2:25108243-25108262 | None:intergenic | 40.0% | |
!! | TCTTCAGATTGGTTTGCAGA+GGG | + | chr7_2:25108267-25108286 | None:intergenic | 40.0% |
AGTCCGATTTCTCTTCAGAT+TGG | + | chr7_2:25108278-25108297 | None:intergenic | 40.0% | |
ATCTGAAGAGAAATCGGACT+TGG | - | chr7_2:25108278-25108297 | Msa1054060:intron | 40.0% | |
TAAAATCTCCTTCGCCTTAG+TGG | + | chr7_2:25108326-25108345 | None:intergenic | 40.0% | |
! | ACTAAGGCGAAGGAGATTTT+AGG | - | chr7_2:25108325-25108344 | Msa1054060:intron | 40.0% |
! | CTAAGGCGAAGGAGATTTTA+GGG | - | chr7_2:25108326-25108345 | Msa1054060:intron | 40.0% |
!!! | GTAATTTTGGGATGAGAGCT+AGG | + | chr7_2:25108353-25108372 | None:intergenic | 40.0% |
! | CTCGTTAACTTGACCTTGTT+TGG | + | chr7_2:25108462-25108481 | None:intergenic | 40.0% |
ATCTGTAAGCCGAAAAGAGA+GGG | + | chr7_2:25108510-25108529 | None:intergenic | 40.0% | |
! | TTTTTGTGGGGAGGATCTAA+GGG | + | chr7_2:25108558-25108577 | None:intergenic | 40.0% |
!!! | TTTTTTGTGGGGAGGATCTA+AGG | + | chr7_2:25108559-25108578 | None:intergenic | 40.0% |
ATCTGTTTCCAAACCTTCAC+CGG | - | chr7_2:25108598-25108617 | Msa1054060:intron | 40.0% | |
CCCAAGACTCACAAATCTAT+TGG | - | chr7_2:25108690-25108709 | Msa1054060:intron | 40.0% | |
ATCTATTGGTCCAAGAGTTG+AGG | - | chr7_2:25108704-25108723 | Msa1054060:intron | 40.0% | |
AGTTGAGGCTAGACTCAATA+AGG | - | chr7_2:25108719-25108738 | Msa1054060:intron | 40.0% | |
!! | GGTCTCAAGTTCTAGAAGAA+TGG | - | chr7_2:25108752-25108771 | Msa1054060:intron | 40.0% |
! | CTTTCAAGTATCTAGGTTCC+CGG | + | chr7_2:25108791-25108810 | None:intergenic | 40.0% |
GCTTTCTTCATTGTAGGTTG+GGG | + | chr7_2:25108821-25108840 | None:intergenic | 40.0% | |
GGCTTTCTTCATTGTAGGTT+GGG | + | chr7_2:25108822-25108841 | None:intergenic | 40.0% | |
! | TCTTTTCTTAGGATGGCAGA+GGG | + | chr7_2:25108843-25108862 | None:intergenic | 40.0% |
! | AGACGACTCTTTTCTTAGGA+TGG | + | chr7_2:25108850-25108869 | None:intergenic | 40.0% |
TTGCTAAGAGTTTCCTTGTG+GGG | + | chr7_2:25108881-25108900 | None:intergenic | 40.0% | |
AAGTATTCCTATTGAGTGGC+GGG | + | chr7_2:25109125-25109144 | None:intergenic | 40.0% | |
CAAGTATTCCTATTGAGTGG+CGG | + | chr7_2:25109126-25109145 | None:intergenic | 40.0% | |
CATGGGATACACACAATTCA+TGG | - | chr7_2:25109191-25109210 | Msa1054060:CDS | 40.0% | |
TGCGTCAATTGTTAGTGAAG+TGG | - | chr7_2:25109294-25109313 | Msa1054060:CDS | 40.0% | |
GCGTCAATTGTTAGTGAAGT+GGG | - | chr7_2:25109295-25109314 | Msa1054060:CDS | 40.0% | |
TCAATTGTTAGTGAAGTGGG+TGG | - | chr7_2:25109298-25109317 | Msa1054060:CDS | 40.0% | |
CAATTGTTAGTGAAGTGGGT+GGG | - | chr7_2:25109299-25109318 | Msa1054060:CDS | 40.0% | |
AATTGTTAGTGAAGTGGGTG+GGG | - | chr7_2:25109300-25109319 | Msa1054060:CDS | 40.0% | |
CAAATCTCAGGCAATAGCAA+AGG | + | chr7_2:25109406-25109425 | None:intergenic | 40.0% | |
TTTCATCTGGTGGGAATGAA+TGG | - | chr7_2:25109944-25109963 | Msa1054060:intron | 40.0% | |
TTCATCTGGTGGGAATGAAT+GGG | - | chr7_2:25109945-25109964 | Msa1054060:intron | 40.0% | |
GCAAACATGCTTAAGGATTC+GGG | - | chr7_2:25110113-25110132 | Msa1054060:intron | 40.0% | |
ATTCGGGCTCCTAAATTGAT+AGG | - | chr7_2:25110129-25110148 | Msa1054060:intron | 40.0% | |
CAGTGATGTCTGAAGACAAT+AGG | - | chr7_2:25110735-25110754 | Msa1054060:intron | 40.0% | |
CTTGAATATCTCTCTCTCCT+TGG | + | chr7_2:25110976-25110995 | None:intergenic | 40.0% | |
! | AAAATGGTGCAGCCGATTTA+TGG | + | chr7_2:25111173-25111192 | None:intergenic | 40.0% |
GATTTGAACTTCTTCCGTCA+AGG | - | chr7_2:25111362-25111381 | Msa1054060:CDS | 40.0% | |
TAACCCCTTCAAACTCAAGT+GGG | - | chr7_2:25111662-25111681 | Msa1054060:intron | 40.0% | |
TTGGAACAGCCTCTGAATTA+GGG | + | chr7_2:25111894-25111913 | None:intergenic | 40.0% | |
! | TTTGGAACAGCCTCTGAATT+AGG | + | chr7_2:25111895-25111914 | None:intergenic | 40.0% |
GGCTGTTCCAAAGAAAATTC+TGG | - | chr7_2:25111903-25111922 | Msa1054060:intron | 40.0% | |
! | ACATTTTCTCTGGTCAGGTT+TGG | + | chr7_2:25111943-25111962 | None:intergenic | 40.0% |
! | TTGCTACATTTTCTCTGGTC+AGG | + | chr7_2:25111948-25111967 | None:intergenic | 40.0% |
!!! | GTGACTTGCTACATTTTCTC+TGG | + | chr7_2:25111953-25111972 | None:intergenic | 40.0% |
GTTGAAGAGAAAGGAATGGT+TGG | - | chr7_2:25112175-25112194 | Msa1054060:CDS | 40.0% | |
ACACTGGCATATCAAACAAG+AGG | - | chr7_2:25112319-25112338 | Msa1054060:intron | 40.0% | |
! | CAAACAAGAGGTGCAAACAA+TGG | - | chr7_2:25112331-25112350 | Msa1054060:intron | 40.0% |
! | GATTTGGAACAAGTTAGGCT+TGG | - | chr7_2:25112430-25112449 | Msa1054060:intron | 40.0% |
GATGTTGTTGCGGAGAATAA+TGG | - | chr7_2:25112472-25112491 | Msa1054060:intron | 40.0% | |
ATAATGGCCATGGTCAAAAC+AGG | - | chr7_2:25112488-25112507 | Msa1054060:intron | 40.0% | |
!!! | TTCCAAACCTGTTTTGACCA+TGG | + | chr7_2:25112498-25112517 | None:intergenic | 40.0% |
TAGAGGAGAACAAGGATTGA+TGG | - | chr7_2:25112594-25112613 | Msa1054060:intron | 40.0% | |
GCTGAATAATGGTGCAGAAA+TGG | - | chr7_2:25112780-25112799 | Msa1054060:intron | 40.0% | |
! | GAGTGGAAAAGAGTTTCTAG+TGG | - | chr7_2:25112978-25112997 | Msa1054060:intron | 40.0% |
!!! | CACGATGCGATTTTAACTTG+AGG | + | chr7_2:25113349-25113368 | None:intergenic | 40.0% |
! | CTCATCCAAGTTTGCTCTTA+AGG | - | chr7_2:25113678-25113697 | Msa1054060:intron | 40.0% |
TGGTTCCTTAAGAGCAAACT+TGG | + | chr7_2:25113686-25113705 | None:intergenic | 40.0% | |
ATGTAGTTGCGAGGAAAAGA+AGG | - | chr7_2:25113738-25113757 | Msa1054060:intron | 40.0% | |
CAATGGGGAACCATCTAATA+GGG | - | chr7_2:25113767-25113786 | Msa1054060:intron | 40.0% | |
! | GGAACCATCTAATAGGGTTT+TGG | - | chr7_2:25113773-25113792 | Msa1054060:intron | 40.0% |
!! | GATCTTGTTGAAGCCTTGTT+TGG | - | chr7_2:25113946-25113965 | Msa1054060:intron | 40.0% |
!! | GCCTTGTTTGGTACTATTGA+AGG | - | chr7_2:25113958-25113977 | Msa1054060:intron | 40.0% |
GCCTTCAATAGTACCAAACA+AGG | + | chr7_2:25113962-25113981 | None:intergenic | 40.0% | |
TGTTTGGTACTATTGAAGGC+TGG | - | chr7_2:25113962-25113981 | Msa1054060:intron | 40.0% | |
!! | CTCTTCAGATTGGTTTGCAG+AGG | + | chr7_2:25108268-25108287 | None:intergenic | 45.0% |
GTATCTTGTCAGTCGGGTAT+GGG | + | chr7_2:25108392-25108411 | None:intergenic | 45.0% | |
AGTATCTTGTCAGTCGGGTA+TGG | + | chr7_2:25108393-25108412 | None:intergenic | 45.0% | |
TGGCGTAGTATCTTGTCAGT+CGG | + | chr7_2:25108399-25108418 | None:intergenic | 45.0% | |
! | ACTTGACCTTGTTTGGCAAG+TGG | + | chr7_2:25108455-25108474 | None:intergenic | 45.0% |
CATCTGTAAGCCGAAAAGAG+AGG | + | chr7_2:25108511-25108530 | None:intergenic | 45.0% | |
AGGATCTAAGGGAGGGAATA+GGG | + | chr7_2:25108547-25108566 | None:intergenic | 45.0% | |
TGAAAATGCCGGTGAAGGTT+TGG | + | chr7_2:25108609-25108628 | None:intergenic | 45.0% | |
TTGAGTCTAGCCTCAACTCT+TGG | + | chr7_2:25108717-25108736 | None:intergenic | 45.0% | |
CGGGAACCTAGATACTTGAA+AGG | - | chr7_2:25108789-25108808 | Msa1054060:intron | 45.0% | |
GGGCTTTCTTCATTGTAGGT+TGG | + | chr7_2:25108823-25108842 | None:intergenic | 45.0% | |
CAGAGGGCTTTCTTCATTGT+AGG | + | chr7_2:25108827-25108846 | None:intergenic | 45.0% | |
! | CTCTTTTCTTAGGATGGCAG+AGG | + | chr7_2:25108844-25108863 | None:intergenic | 45.0% |
TGCTAAGAGTTTCCTTGTGG+GGG | + | chr7_2:25108880-25108899 | None:intergenic | 45.0% | |
AACATTACCCGCCACTCAAT+AGG | - | chr7_2:25109115-25109134 | Msa1054060:CDS | 45.0% | |
AGATAACCGTGCTACAACAC+AGG | + | chr7_2:25109254-25109273 | None:intergenic | 45.0% | |
TGCATGTCTGGTAGGTATAG+AGG | + | chr7_2:25109651-25109670 | None:intergenic | 45.0% | |
CAAAGCATGACGAGCATCTT+TGG | + | chr7_2:25109876-25109895 | None:intergenic | 45.0% | |
GTAACCCCTTCAAACTCAAG+TGG | - | chr7_2:25111661-25111680 | Msa1054060:intron | 45.0% | |
ACACCCACTTGAGTTTGAAG+GGG | + | chr7_2:25111668-25111687 | None:intergenic | 45.0% | |
CACACCCACTTGAGTTTGAA+GGG | + | chr7_2:25111669-25111688 | None:intergenic | 45.0% | |
TCACACCCACTTGAGTTTGA+AGG | + | chr7_2:25111670-25111689 | None:intergenic | 45.0% | |
CTGCGAGATGTTGAAGAGAA+AGG | - | chr7_2:25112166-25112185 | Msa1054060:intron | 45.0% | |
GAAGAGAAAGGAATGGTTGG+AGG | - | chr7_2:25112178-25112197 | Msa1054060:CDS | 45.0% | |
!! | AGGGTTGGCTCTTCAAGATT+TGG | - | chr7_2:25112414-25112433 | Msa1054060:intron | 45.0% |
GGTGCAGAAATGGTTGGAAT+TGG | - | chr7_2:25112790-25112809 | Msa1054060:intron | 45.0% | |
TGACAAGAATCTCCGTAACG+AGG | - | chr7_2:25113167-25113186 | Msa1054060:intron | 45.0% | |
AACTCACAGGCAAGTCTCAT+TGG | - | chr7_2:25113403-25113422 | Msa1054060:intron | 45.0% | |
CCTATTAGATGGTTCCCCAT+TGG | + | chr7_2:25113769-25113788 | None:intergenic | 45.0% | |
CCAATGGGGAACCATCTAAT+AGG | - | chr7_2:25113766-25113785 | Msa1054060:intron | 45.0% | |
CCTCCCAAAACCCTATTAGA+TGG | + | chr7_2:25113780-25113799 | None:intergenic | 45.0% | |
!!! | CCATCTAATAGGGTTTTGGG+AGG | - | chr7_2:25113777-25113796 | Msa1054060:intron | 45.0% |
TTGGTACTATTGAAGGCTGG+AGG | - | chr7_2:25113965-25113984 | Msa1054060:intron | 45.0% | |
TGGTACTATTGAAGGCTGGA+GGG | - | chr7_2:25113966-25113985 | Msa1054060:intron | 45.0% | |
!!! | TATTTTGATAAATAATTTAT+AGG | - | chr7_2:25110401-25110420 | Msa1054060:intron | 5.0% |
!!! | ATTTTGATAAATAATTTATA+GGG | - | chr7_2:25110402-25110421 | Msa1054060:intron | 5.0% |
!!! | TCATTTTAAAATAATATAAA+TGG | - | chr7_2:25111303-25111322 | Msa1054060:CDS | 5.0% |
TTTGGGGGGGATATCTGGTT+AGG | + | chr7_2:25108206-25108225 | None:intergenic | 50.0% | |
!! | GTTCTTTTGGGGGGGATATC+TGG | + | chr7_2:25108211-25108230 | None:intergenic | 50.0% |
TGCAGAGGGTTTGTCTCAAG+TGG | + | chr7_2:25108253-25108272 | None:intergenic | 50.0% | |
ACCTCTTTCCACTAAGGCGA+AGG | - | chr7_2:25108315-25108334 | Msa1054060:intron | 50.0% | |
TCCTTCGCCTTAGTGGAAAG+AGG | + | chr7_2:25108319-25108338 | None:intergenic | 50.0% | |
GGCGTAGTATCTTGTCAGTC+GGG | + | chr7_2:25108398-25108417 | None:intergenic | 50.0% | |
! | TGACCTTGTTTGGCAAGTGG+AGG | + | chr7_2:25108452-25108471 | None:intergenic | 50.0% |
! | GAAAAGAGAGGGTGCATTGG+GGG | + | chr7_2:25108499-25108518 | None:intergenic | 50.0% |
! | CGAAAAGAGAGGGTGCATTG+GGG | + | chr7_2:25108500-25108519 | None:intergenic | 50.0% |
! | CCGAAAAGAGAGGGTGCATT+GGG | + | chr7_2:25108501-25108520 | None:intergenic | 50.0% |
! | CCCAATGCACCCTCTCTTTT+CGG | - | chr7_2:25108498-25108517 | Msa1054060:intron | 50.0% |
GAGGATCTAAGGGAGGGAAT+AGG | + | chr7_2:25108548-25108567 | None:intergenic | 50.0% | |
GAATGGGAATTCGCTCCTAC+CGG | - | chr7_2:25108769-25108788 | Msa1054060:intron | 50.0% | |
AATGGGAATTCGCTCCTACC+GGG | - | chr7_2:25108770-25108789 | Msa1054060:intron | 50.0% | |
CAAGTATCTAGGTTCCCGGT+AGG | + | chr7_2:25108787-25108806 | None:intergenic | 50.0% | |
GTGCTACAACACAGGTAACG+CGG | + | chr7_2:25109246-25109265 | None:intergenic | 50.0% | |
GCGTTACCTGTGTTGTAGCA+CGG | - | chr7_2:25109245-25109264 | Msa1054060:CDS | 50.0% | |
! | TGGTGCAGCCGATTTATGGT+TGG | + | chr7_2:25111169-25111188 | None:intergenic | 50.0% |
GTTGGAAGCCGATGTTGTTG+CGG | - | chr7_2:25112462-25112481 | Msa1054060:intron | 50.0% | |
GTTGCGGAGAATAATGGCCA+TGG | - | chr7_2:25112478-25112497 | Msa1054060:intron | 50.0% | |
GGCCATGGTCAAAACAGGTT+TGG | - | chr7_2:25112493-25112512 | Msa1054060:intron | 50.0% | |
!! | AGCTAGTGGAAGCACCATCA+TGG | + | chr7_2:25112564-25112583 | None:intergenic | 50.0% |
! | GGTTTGGTTCAAGGAGGGTT+TGG | - | chr7_2:25112925-25112944 | Msa1054060:intron | 50.0% |
TCTGATGTTAAGGGAGGGAG+TGG | - | chr7_2:25112961-25112980 | Msa1054060:intron | 50.0% | |
AGGATTCTAGCGGAGGGTGA+TGG | + | chr7_2:25108426-25108445 | None:intergenic | 55.0% | |
AGGTGGAGGATTCTAGCGGA+GGG | + | chr7_2:25108432-25108451 | None:intergenic | 55.0% | |
GTGGAGGTGGAGGATTCTAG+CGG | + | chr7_2:25108436-25108455 | None:intergenic | 55.0% | |
TGTTTGGCAAGTGGAGGTGG+AGG | + | chr7_2:25108446-25108465 | None:intergenic | 55.0% | |
! | CCTTGTTTGGCAAGTGGAGG+TGG | + | chr7_2:25108449-25108468 | None:intergenic | 55.0% |
CCACCTCCACTTGCCAAACA+AGG | - | chr7_2:25108446-25108465 | Msa1054060:intron | 55.0% | |
! | GCCGAAAAGAGAGGGTGCAT+TGG | + | chr7_2:25108502-25108521 | None:intergenic | 55.0% |
TGTGGGGAGGATCTAAGGGA+GGG | + | chr7_2:25108554-25108573 | None:intergenic | 55.0% | |
TTGTGGGGAGGATCTAAGGG+AGG | + | chr7_2:25108555-25108574 | None:intergenic | 55.0% | |
TGTGAGTCTTGGGGGTAGAG+TGG | + | chr7_2:25108683-25108702 | None:intergenic | 55.0% | |
CGTCTACATGAACCCCCACA+AGG | - | chr7_2:25108865-25108884 | Msa1054060:intron | 55.0% | |
! | GGTTCAAGGAGGGTTTGGTC+TGG | - | chr7_2:25112930-25112949 | Msa1054060:intron | 55.0% |
! | TAGCGGAGGGTGATGGCTTG+TGG | + | chr7_2:25108419-25108438 | None:intergenic | 60.0% |
GAGGTGGAGGATTCTAGCGG+AGG | + | chr7_2:25108433-25108452 | None:intergenic | 60.0% | |
! | AGGGAGGGAATAGGGCTAGC+TGG | + | chr7_2:25108539-25108558 | None:intergenic | 60.0% |
CGAGCTCGCCTCTAGTCTGT+GGG | + | chr7_2:25108910-25108929 | None:intergenic | 60.0% | |
TCGAGCTCGCCTCTAGTCTG+TGG | + | chr7_2:25108911-25108930 | None:intergenic | 60.0% | |
! | TGCATCCGTGCCGATACGCG+CGG | - | chr7_2:25109215-25109234 | Msa1054060:intron | 65.0% |
! | CTTCACCGCGCGTATCGGCA+CGG | + | chr7_2:25109223-25109242 | None:intergenic | 65.0% |
CGCGGCTTCACCGCGCGTAT+CGG | + | chr7_2:25109228-25109247 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 25108193 | 25113993 | 25108193 | ID=Msa1054060;Name=Msa1054060 |
chr7_2 | mRNA | 25108193 | 25113993 | 25108193 | ID=Msa1054060-mRNA-1;Parent=Msa1054060;Name=Msa1054060-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|0.91|0.45|0.33|12|0|548 |
chr7_2 | exon | 25113990 | 25113993 | 25113990 | ID=Msa1054060-mRNA-1:exon:5444;Parent=Msa1054060-mRNA-1 |
chr7_2 | exon | 25112170 | 25112322 | 25112170 | ID=Msa1054060-mRNA-1:exon:5443;Parent=Msa1054060-mRNA-1 |
chr7_2 | exon | 25111299 | 25111448 | 25111299 | ID=Msa1054060-mRNA-1:exon:5442;Parent=Msa1054060-mRNA-1 |
chr7_2 | exon | 25111110 | 25111277 | 25111110 | ID=Msa1054060-mRNA-1:exon:5441;Parent=Msa1054060-mRNA-1 |
chr7_2 | exon | 25110208 | 25110284 | 25110208 | ID=Msa1054060-mRNA-1:exon:5440;Parent=Msa1054060-mRNA-1 |
chr7_2 | exon | 25109960 | 25110035 | 25109960 | ID=Msa1054060-mRNA-1:exon:5439;Parent=Msa1054060-mRNA-1 |
chr7_2 | exon | 25109725 | 25109947 | 25109725 | ID=Msa1054060-mRNA-1:exon:5438;Parent=Msa1054060-mRNA-1 |
chr7_2 | exon | 25109436 | 25109676 | 25109436 | ID=Msa1054060-mRNA-1:exon:5437;Parent=Msa1054060-mRNA-1 |
chr7_2 | exon | 25109220 | 25109405 | 25109220 | ID=Msa1054060-mRNA-1:exon:5436;Parent=Msa1054060-mRNA-1 |
chr7_2 | exon | 25108998 | 25109213 | 25108998 | ID=Msa1054060-mRNA-1:exon:5435;Parent=Msa1054060-mRNA-1 |
chr7_2 | exon | 25108350 | 25108442 | 25108350 | ID=Msa1054060-mRNA-1:exon:5434;Parent=Msa1054060-mRNA-1 |
chr7_2 | exon | 25108193 | 25108252 | 25108193 | ID=Msa1054060-mRNA-1:exon:5433;Parent=Msa1054060-mRNA-1 |
chr7_2 | CDS | 25113990 | 25113993 | 25113990 | ID=Msa1054060-mRNA-1:cds;Parent=Msa1054060-mRNA-1 |
chr7_2 | CDS | 25112170 | 25112322 | 25112170 | ID=Msa1054060-mRNA-1:cds;Parent=Msa1054060-mRNA-1 |
chr7_2 | CDS | 25111299 | 25111448 | 25111299 | ID=Msa1054060-mRNA-1:cds;Parent=Msa1054060-mRNA-1 |
chr7_2 | CDS | 25111110 | 25111277 | 25111110 | ID=Msa1054060-mRNA-1:cds;Parent=Msa1054060-mRNA-1 |
chr7_2 | CDS | 25110208 | 25110284 | 25110208 | ID=Msa1054060-mRNA-1:cds;Parent=Msa1054060-mRNA-1 |
chr7_2 | CDS | 25109960 | 25110035 | 25109960 | ID=Msa1054060-mRNA-1:cds;Parent=Msa1054060-mRNA-1 |
chr7_2 | CDS | 25109725 | 25109947 | 25109725 | ID=Msa1054060-mRNA-1:cds;Parent=Msa1054060-mRNA-1 |
chr7_2 | CDS | 25109436 | 25109676 | 25109436 | ID=Msa1054060-mRNA-1:cds;Parent=Msa1054060-mRNA-1 |
chr7_2 | CDS | 25109220 | 25109405 | 25109220 | ID=Msa1054060-mRNA-1:cds;Parent=Msa1054060-mRNA-1 |
chr7_2 | CDS | 25108998 | 25109213 | 25108998 | ID=Msa1054060-mRNA-1:cds;Parent=Msa1054060-mRNA-1 |
chr7_2 | CDS | 25108350 | 25108442 | 25108350 | ID=Msa1054060-mRNA-1:cds;Parent=Msa1054060-mRNA-1 |
chr7_2 | CDS | 25108193 | 25108252 | 25108193 | ID=Msa1054060-mRNA-1:cds;Parent=Msa1054060-mRNA-1 |
Gene Sequence |
Protein sequence |