AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1054310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1054310 MtrunA17_Chr6g0481041 62.277 729 174 13 1 631 1 726 0.0 831
Msa1054310 MtrunA17_Chr7g0224451 82.599 454 39 5 15 438 1 444 0.0 753
Msa1054310 MtrunA17_Chr7g0224481 82.808 349 31 4 15 344 1 339 0.0 582
Msa1054310 MtrunA17_Chr7g0224491 88.552 297 23 1 347 632 1 297 0.0 528
Msa1054310 MtrunA17_Chr8g0350321 43.018 709 292 18 25 630 109 808 1.02e-174 517
Msa1054310 MtrunA17_Chr7g0246631 42.468 697 293 18 31 630 91 776 1.67e-170 505
Msa1054310 MtrunA17_Chr2g0322731 41.884 690 297 15 29 632 98 769 5.27e-163 485
Msa1054310 MtrunA17_Chr5g0410711 40.483 704 321 16 20 628 78 778 1.34e-160 480
Msa1054310 MtrunA17_Chr4g0024351 40.056 709 319 18 11 629 38 730 4.90e-158 471
Msa1054310 MtrunA17_Chr1g0203671 39.574 705 313 20 29 628 93 789 5.46e-155 466
Msa1054310 MtrunA17_Chr2g0331581 35.347 662 347 15 36 630 144 791 9.42e-137 418
Msa1054310 MtrunA17_Chr6g0472471 36.325 702 328 17 36 628 74 765 9.65e-127 392
Msa1054310 MtrunA17_Chr5g0394111 35.241 664 300 20 38 628 40 646 2.12e-112 351
Msa1054310 MtrunA17_Chr2g0292731 37.251 553 290 12 117 628 12 548 8.72e-103 323
Msa1054310 MtrunA17_Chr2g0292741 38.247 502 256 9 165 628 50 535 7.31e-101 317
Msa1054310 MtrunA17_Chr2g0292761 35.461 564 308 18 97 628 1 540 6.13e-86 279
Msa1054310 MtrunA17_Chr7g0224461 88.136 118 14 0 515 632 1 118 5.15e-65 209
Msa1054310 MtrunA17_Chr7g0224431 65.217 161 15 2 194 354 1 120 9.33e-61 198
Msa1054310 MtrunA17_Chr2g0319671 32.353 238 135 6 163 395 51 267 6.28e-29 117
Msa1054310 MtrunA17_Chr2g0304191 44.030 134 73 2 179 311 1 133 7.62e-27 106
Msa1054310 MtrunA17_Chr5g0419821 42.466 146 57 4 8 129 14 156 5.97e-24 99.0
Msa1054310 MtrunA17_Chr2g0319681 28.571 238 136 7 412 628 1 225 3.90e-21 93.2
Msa1054310 MtrunA17_Chr2g0319691 34.356 163 92 4 285 441 1 154 2.64e-20 88.2
Msa1054310 MtrunA17_Chr3g0140351 22.059 680 350 30 37 598 23 640 1.61e-17 87.0
Msa1054310 MtrunA17_Chr2g0319701 28.261 230 137 7 416 628 5 223 1.60e-16 79.7
Msa1054310 MtrunA17_Chr2g0292391 21.670 503 284 17 37 472 16 475 9.87e-16 81.3
Msa1054310 MtrunA17_Chr8g0340411 22.496 689 344 34 37 602 18 639 4.54e-15 79.0
Msa1054310 MtrunA17_Chr4g0028991 20.196 713 383 27 1 598 7 648 1.11e-13 74.7
Msa1054310 MtrunA17_Chr1g0205981 30.769 182 77 7 73 214 1 173 2.59e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1054310 AT1G73360.1 50.358 699 239 15 30 632 31 717 0.0 619
Msa1054310 AT1G17920.2 50.581 688 223 19 34 631 24 684 0.0 597
Msa1054310 AT1G17920.1 50.581 688 223 19 34 631 24 684 0.0 597
Msa1054310 AT4G04890.2 42.733 688 298 18 31 632 62 739 1.39e-172 509
Msa1054310 AT4G04890.1 42.733 688 298 18 31 632 62 739 1.39e-172 509
Msa1054310 AT4G21750.2 41.549 710 293 18 31 630 62 759 7.49e-164 488
Msa1054310 AT4G21750.1 41.549 710 293 18 31 630 62 759 7.49e-164 488
Msa1054310 AT4G21750.3 41.549 710 293 18 31 630 62 759 7.49e-164 488
Msa1054310 AT4G21750.4 41.549 710 293 18 31 630 62 759 7.49e-164 488
Msa1054310 AT1G05230.3 40.346 694 304 17 20 630 50 716 7.22e-159 473
Msa1054310 AT3G61150.1 39.747 712 315 19 24 630 103 805 1.34e-158 476
Msa1054310 AT4G00730.1 41.667 684 298 16 31 630 134 800 4.07e-157 472
Msa1054310 AT1G05230.8 40.230 696 304 18 20 630 50 718 6.81e-157 468
Msa1054310 AT1G05230.4 40.230 696 304 18 20 630 50 718 6.81e-157 468
Msa1054310 AT1G05230.9 40.230 696 304 18 20 630 50 718 6.81e-157 468
Msa1054310 AT1G05230.10 40.230 696 304 18 20 630 50 718 6.81e-157 468
Msa1054310 AT1G05230.7 40.230 696 304 18 20 630 50 718 6.81e-157 468
Msa1054310 AT1G05230.11 40.230 696 304 18 20 630 50 718 6.81e-157 468
Msa1054310 AT1G05230.2 40.230 696 304 18 20 630 50 718 6.81e-157 468
Msa1054310 AT1G05230.6 40.230 696 304 18 20 630 50 718 6.81e-157 468
Msa1054310 AT1G05230.5 40.230 696 304 18 20 630 50 718 6.81e-157 468
Msa1054310 AT1G05230.1 40.230 696 304 18 20 630 50 718 6.81e-157 468
Msa1054310 AT5G52170.3 39.181 684 320 19 13 632 31 682 2.19e-139 422
Msa1054310 AT5G52170.1 39.181 684 320 19 13 632 31 682 2.19e-139 422
Msa1054310 AT5G52170.2 38.897 689 320 19 13 632 31 687 1.75e-138 420
Msa1054310 AT3G03260.1 36.146 711 330 16 20 631 12 697 1.92e-128 394
Msa1054310 AT5G46880.3 37.535 714 312 21 31 628 111 806 1.38e-125 391
Msa1054310 AT5G46880.1 37.535 714 312 21 31 628 111 806 1.38e-125 391
Msa1054310 AT5G46880.2 37.535 714 312 21 31 628 111 806 1.38e-125 391
Msa1054310 AT1G05230.12 39.076 563 256 13 20 506 50 601 1.88e-123 379
Msa1054310 AT1G79840.3 35.401 661 353 19 27 628 39 684 2.40e-122 378
Msa1054310 AT1G79840.6 35.401 661 353 19 27 628 39 684 2.40e-122 378
Msa1054310 AT1G79840.1 35.401 661 353 19 27 628 97 742 8.90e-122 379
Msa1054310 AT1G79840.2 35.401 661 353 19 27 628 126 771 1.84e-121 379
Msa1054310 AT4G17710.1 38.509 644 322 19 31 628 88 703 2.54e-119 371
Msa1054310 AT5G17320.1 35.027 728 332 21 20 630 14 717 2.79e-114 358
Msa1054310 AT2G32370.1 34.720 697 342 20 18 630 55 722 2.41e-112 353
Msa1054310 AT1G79840.4 35.539 529 285 14 27 504 97 620 3.27e-101 322
Msa1054310 AT1G34650.1 33.949 704 335 14 38 630 23 707 2.79e-98 316
Msa1054310 AT4G00730.2 41.981 424 183 10 31 398 134 550 2.01e-95 305
Msa1054310 AT3G03260.2 36.210 533 258 11 20 476 12 538 1.36e-94 301
Msa1054310 AT4G25530.1 32.738 672 361 17 26 629 35 683 1.34e-91 298
Msa1054310 AT1G79840.5 38.974 390 209 11 27 392 97 481 1.96e-78 258
Msa1054310 AT5G07260.2 26.719 509 304 18 84 557 10 484 1.89e-41 158
Msa1054310 AT5G07260.1 26.459 514 304 18 84 557 10 489 8.33e-41 156
Msa1054310 AT4G26920.1 25.223 448 245 18 179 608 72 447 1.03e-19 92.8
Msa1054310 AT4G32880.1 21.173 699 368 30 21 598 2 638 1.56e-16 84.0
Msa1054310 AT5G60690.1 22.543 519 284 22 17 472 8 471 2.41e-14 77.0
Msa1054310 AT1G52150.3 21.029 680 367 28 37 602 20 643 2.03e-13 73.9
Msa1054310 AT1G52150.1 21.268 710 385 31 37 629 20 672 2.60e-13 73.9
Msa1054310 AT1G52150.2 21.238 711 385 31 37 629 20 673 3.20e-13 73.6
Msa1054310 AT1G30490.1 20.682 469 280 16 14 433 1 426 1.57e-12 71.2
Msa1054310 AT2G34710.1 20.404 446 263 15 37 433 28 430 9.80e-11 65.5

Find 112 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTTTGGTTGAAATGTTTA+TGG 0.116059 7_2:+25803403 Msa1054310:CDS
CCAATTGTTAATGGACTTAT+TGG 0.149364 7_2:+25805820 Msa1054310:CDS
TGGAAACTAATGAGCCTTTA+TGG 0.155056 7_2:+25803237 Msa1054310:CDS
AACAGTTGCATTTCAAATTA+TGG 0.161793 7_2:+25805765 Msa1054310:CDS
TAACTGCATTTCCGTGTTTA+AGG 0.200891 7_2:+25805197 Msa1054310:CDS
ATCCTACCAAGATAAAATTT+TGG 0.230797 7_2:+25802137 Msa1054310:CDS
GAGTCTGTTCCAATTGTTAA+TGG 0.231563 7_2:+25805811 Msa1054310:CDS
AGAAGCTTCGATGCGAATAT+TGG 0.259862 7_2:-25803348 None:intergenic
CATTCTCTTCTATGAGTATA+CGG 0.271618 7_2:-25802326 None:intergenic
AACAATGATCCTCCAATGTT+TGG 0.280132 7_2:-25805742 None:intergenic
TGTTTCTTCTAAGAGACTTA+TGG 0.294415 7_2:+25801432 Msa1054310:CDS
ATTTGCCATTAGGCATGTTT+TGG 0.302182 7_2:-25803974 None:intergenic
CCTAGGGAACATTGTTTCAT+AGG 0.302491 7_2:-25803303 None:intergenic
ACCTGCTGGTCTCTCTAATA+AGG 0.317654 7_2:+25803157 Msa1054310:CDS
AGGAAGTAAAATTCTCTAAT+AGG 0.322633 7_2:-25803831 None:intergenic
CGAGGCCTTCGTCTTCCTTC+CGG 0.332723 7_2:+25803942 Msa1054310:CDS
ATCTATAGTGGAGTTGCATT+TGG 0.334624 7_2:+25804181 Msa1054310:CDS
ATTACCTTGGATTTGCCATT+AGG 0.342697 7_2:-25803984 None:intergenic
ACTCTTACGCTTCAAGCCTT+TGG 0.345673 7_2:-25801537 None:intergenic
TTTGCCATTGTCACAATAGT+TGG 0.352656 7_2:-25803552 None:intergenic
CAAGGAGGTAATAGTGATAA+TGG 0.367284 7_2:+25805694 Msa1054310:CDS
TCTTAGTGGTTCTTTGCAAT+TGG 0.371610 7_2:+25803611 Msa1054310:CDS
GAAGCAAAATGTTTGTTATG+AGG 0.381185 7_2:-25803912 None:intergenic
ACAATGATCCTCCAATGTTT+GGG 0.386821 7_2:-25805741 None:intergenic
TATAGAAATGTTATCTATAG+TGG 0.388325 7_2:+25804169 Msa1054310:CDS
AAGAAATTGAACACAGTTTG+TGG 0.389284 7_2:-25804691 None:intergenic
CCAATAAGTCCATTAACAAT+TGG 0.391204 7_2:-25805820 None:intergenic
ATCGAAGCTTCTAGAAATTC+TGG 0.400503 7_2:+25803359 Msa1054310:CDS
GAAGCTTCGATGCGAATATT+GGG 0.405652 7_2:-25803347 None:intergenic
GCAGGTTGGTAAGGAACATT+TGG 0.407059 7_2:-25803140 None:intergenic
CTCATTATTGATGAATCAAC+AGG 0.412591 7_2:-25805589 None:intergenic
CGAACGAAGGATGGTCTTAG+TGG 0.418990 7_2:+25803597 Msa1054310:CDS
TTTCTTCTGATACTCATAAG+AGG 0.424848 7_2:+25801476 Msa1054310:CDS
GGTTTCGCAATTACTTCTGA+TGG 0.425225 7_2:+25805649 Msa1054310:CDS
ATGCATTAGCTAGTCATAGA+TGG 0.431673 7_2:+25804572 Msa1054310:CDS
GCGCTTAGCACCTCACCATT+AGG 0.435182 7_2:-25804640 None:intergenic
TTTCTATAGAGCATATGAAC+TGG 0.444548 7_2:-25804154 None:intergenic
AACACGGAAATGCAGTTACC+TGG 0.445852 7_2:-25805192 None:intergenic
ATCATGGTCCTCTTTCCATC+AGG 0.446341 7_2:-25804505 None:intergenic
GGCAATGTTGATGAACTTCC+TGG 0.447876 7_2:-25803119 None:intergenic
TACATTCAATTACTACCATC+AGG 0.449951 7_2:+25805628 Msa1054310:CDS
GAAAGTTGTGTGGACTCATC+AGG 0.456149 7_2:+25805547 Msa1054310:CDS
GAGAGACCAGCAGGTTGGTA+AGG 0.458220 7_2:-25803149 None:intergenic
CCTTTGTGTTAGCTTCATCA+TGG 0.462487 7_2:-25804521 None:intergenic
GGAACAGACTCCATGTTAGA+TGG 0.463514 7_2:-25805799 None:intergenic
CAAAATGATAATAATATTCA+AGG 0.464579 7_2:+25805676 Msa1054310:CDS
ACATTGTTTCATAGGTTTCA+AGG 0.467987 7_2:-25803295 None:intergenic
TTCATCCAAAACATGCCTAA+TGG 0.470312 7_2:+25803969 Msa1054310:CDS
TACTGTAAACAATTTGAGAA+AGG 0.478598 7_2:+25803858 Msa1054310:CDS
TAAGCGCATCTACTACCATT+TGG 0.483607 7_2:+25804656 Msa1054310:CDS
CTCTTGAACATCATTACCAT+TGG 0.494619 7_2:-25805142 None:intergenic
AGCATTGCAGCTGGATACAC+TGG 0.498024 7_2:+25803074 Msa1054310:CDS
AACACAGTTTGTGGAGGGAG+AGG 0.500511 7_2:-25804682 None:intergenic
TCCTTATTAGAGAGACCAGC+AGG 0.504163 7_2:-25803158 None:intergenic
GTAAACAATTTGAGAAAGGA+TGG 0.505133 7_2:+25803862 Msa1054310:CDS
CCTATGAAACAATGTTCCCT+AGG 0.505913 7_2:+25803303 Msa1054310:CDS
TTGATGAACTTCCTGGTAGA+AGG 0.508996 7_2:-25803112 None:intergenic
ATAGCAAATGTTTCGCGCCC+AGG 0.511234 7_2:+25805174 Msa1054310:CDS
TTTAACTGATTATTAACCCT+AGG 0.515861 7_2:-25803320 None:intergenic
TGGATAAAATCAAACACTGA+TGG 0.528970 7_2:+25803257 Msa1054310:CDS
TAGTCGAATGTACTTTCCAA+TGG 0.529852 7_2:+25805126 Msa1054310:intron
TGTCATGAATGCCTCGACTT+TGG 0.538376 7_2:+25803388 Msa1054310:CDS
GTGAGGAAGAGTCAGCCTAA+TGG 0.540825 7_2:+25804625 Msa1054310:CDS
TTAACTGATTATTAACCCTA+GGG 0.546265 7_2:-25803319 None:intergenic
TCAGTGATTTCATCACCTGA+TGG 0.552751 7_2:+25804490 Msa1054310:intron
AGTTATATCTTCTCGAACGA+AGG 0.555948 7_2:+25803584 Msa1054310:CDS
TTCTATAGAGCATATGAACT+GGG 0.555956 7_2:-25804153 None:intergenic
AATGTTCCTTACCAACCTGC+TGG 0.559665 7_2:+25803143 Msa1054310:CDS
AGAGTATCTAGCATTGCAGC+TGG 0.559790 7_2:+25803065 Msa1054310:CDS
ATATCTTCTCGAACGAAGGA+TGG 0.565148 7_2:+25803588 Msa1054310:CDS
ATTTCCAACTATTGTGACAA+TGG 0.566424 7_2:+25803548 Msa1054310:CDS
AGCTCAAACCCAAACATTGG+AGG 0.568422 7_2:+25805733 Msa1054310:CDS
GAAGTAATTGCGAAACCTGA+TGG 0.568742 7_2:-25805643 None:intergenic
GATGAAGCTAACACAAAGGA+TGG 0.568765 7_2:+25804525 Msa1054310:CDS
GAATAGAAGGACTCAGATGA+AGG 0.569088 7_2:+25802165 Msa1054310:CDS
CAATGGTAATGATGTTCAAG+AGG 0.572359 7_2:+25805143 Msa1054310:CDS
ACAAGCTCAAACCCAAACAT+TGG 0.579839 7_2:+25805730 Msa1054310:CDS
GATCTGAGAATATAGCTATG+AGG 0.582816 7_2:+25802358 Msa1054310:CDS
TCACTGTCACACCTTCTACC+AGG 0.583984 7_2:+25803101 Msa1054310:CDS
TTTCATCACCTGATGGAAAG+AGG 0.584897 7_2:+25804497 Msa1054310:CDS
ACAAAGGTTGCAGTTAGGCA+AGG 0.593066 7_2:+25802102 Msa1054310:intron
CTATGAAACAATGTTCCCTA+GGG 0.595217 7_2:+25803304 Msa1054310:CDS
TGGAGGGAGAGGTAGCCAAA+TGG 0.596344 7_2:-25804671 None:intergenic
CATGCCTAATGGCAAATCCA+AGG 0.600402 7_2:+25803980 Msa1054310:CDS
GGTAGTAATTGAATGTATGA+AGG 0.601567 7_2:-25805622 None:intergenic
TACTTGGATTGAACATGTTG+AGG 0.602638 7_2:+25804117 Msa1054310:CDS
CAAATTGTTTACAGTAACGT+AGG 0.603339 7_2:-25803851 None:intergenic
TAAACAATTTGAGAAAGGAT+GGG 0.603561 7_2:+25803863 Msa1054310:CDS
CTCATTCAAAGTTGATAACG+TGG 0.605238 7_2:-25804596 None:intergenic
AATTGAACACAGTTTGTGGA+GGG 0.607093 7_2:-25804687 None:intergenic
AAATGCTCGACTCAAAGAAG+AGG 0.608954 7_2:+25802437 Msa1054310:CDS
AATTCTCTAATAGGAACAAG+TGG 0.613864 7_2:-25803822 None:intergenic
GTTAGGCAAGGAATTAGCCA+TGG 0.615783 7_2:+25802114 Msa1054310:CDS
GGATCTGATCAGCAGTGTGA+CGG 0.618661 7_2:-25801516 None:intergenic
TATTAGAGAGACCAGCAGGT+TGG 0.619511 7_2:-25803154 None:intergenic
AAATTGAACACAGTTTGTGG+AGG 0.620718 7_2:-25804688 None:intergenic
CTTATGGAGCATCACAGTGA+AGG 0.621938 7_2:+25801406 None:intergenic
CTTATGGAGCATCACAGTGA+AGG 0.621938 7_2:+25801448 Msa1054310:CDS
GAGTAGTTTACCATCTAACA+TGG 0.623707 7_2:+25805789 Msa1054310:CDS
ACACTGCTGATCAGATCCAA+AGG 0.630792 7_2:+25801521 Msa1054310:CDS
GGACTCATCAGGTTCACTTG+TGG 0.637914 7_2:+25805558 Msa1054310:CDS
AAACATTTCAACCAAAGTCG+AGG 0.640163 7_2:-25803399 None:intergenic
ACACGGAAATGCAGTTACCT+GGG 0.640174 7_2:-25805191 None:intergenic
ATACCAATAAAGAACTACAC+AGG 0.652851 7_2:-25805880 None:intergenic
GAAGAGTCAGCCTAATGGTG+AGG 0.665543 7_2:+25804630 Msa1054310:CDS
GATACTACAAGAAAGTTGTG+TGG 0.680749 7_2:+25805537 Msa1054310:CDS
AATGATAATAATATTCAAGG+AGG 0.684472 7_2:+25805679 Msa1054310:CDS
TGATTCATCAATAATGAGCG+AGG 0.688237 7_2:+25805594 Msa1054310:CDS
AGAATGTCTTACCTTAAACA+CGG 0.688574 7_2:-25805208 None:intergenic
CTTTGAATGAGATTATTGTG+AGG 0.708508 7_2:+25804608 Msa1054310:CDS
AGCAACCGGAAGGAAGACGA+AGG 0.713060 7_2:-25803947 None:intergenic
CCATGATGAAGCTAACACAA+AGG 0.718830 7_2:+25804521 Msa1054310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CGTATAAATAAATAAATAAA+GGG - chr7_2:25801597-25801616 None:intergenic 10.0%
!! TCGTATAAATAAATAAATAA+AGG - chr7_2:25801598-25801617 None:intergenic 10.0%
!!! TGTGTTTTTTAAATTATATT+AGG + chr7_2:25802194-25802213 Msa1054310:intron 10.0%
!!! GTGTTTTTTAAATTATATTA+GGG + chr7_2:25802195-25802214 Msa1054310:intron 10.0%
!! AAAAAAAAAAAAAGTTTGTA+TGG + chr7_2:25802747-25802766 Msa1054310:intron 10.0%
!!! TTAAATATAGTTTAAAATTG+CGG + chr7_2:25802820-25802839 Msa1054310:intron 10.0%
!!! TAAAAGAATTTTAGAAATTA+AGG - chr7_2:25802933-25802952 None:intergenic 10.0%
!!! TCTTGTATATTTTAATTTAT+AGG + chr7_2:25804093-25804112 Msa1054310:intron 10.0%
!!! AGATTGTGAATTAATTTTAT+AGG + chr7_2:25802782-25802801 Msa1054310:intron 15.0%
!!! TATATTTTACCATAATAGAA+AGG - chr7_2:25802858-25802877 None:intergenic 15.0%
!! TTTCTATTATGGTAAAATAT+AGG + chr7_2:25802857-25802876 Msa1054310:intron 15.0%
!! ATTTATGTGGTAAATTAAAA+TGG + chr7_2:25803016-25803035 Msa1054310:intron 15.0%
!!! ATTTTAATTTATAGGTTACT+TGG + chr7_2:25804101-25804120 Msa1054310:intron 15.0%
!! ATAATAATAATAATTGAGTC+TGG - chr7_2:25804771-25804790 None:intergenic 15.0%
!! ATAAAAAAACAAATAAATGG+AGG - chr7_2:25805235-25805254 None:intergenic 15.0%
!! CAAAATGATAATAATATTCA+AGG + chr7_2:25805676-25805695 Msa1054310:CDS 15.0%
!! TATTTATTTATACGACACTT+AGG + chr7_2:25801603-25801622 Msa1054310:intron 20.0%
!!! TAATACATGCACAATTTTAA+TGG + chr7_2:25802521-25802540 Msa1054310:intron 20.0%
!! AAATCTAAACTAACATTCTA+AGG - chr7_2:25802610-25802629 None:intergenic 20.0%
!!! AGATTTTGTAGTTTTCTTTT+TGG + chr7_2:25802624-25802643 Msa1054310:intron 20.0%
!!! GATTTTGTAGTTTTCTTTTT+GGG + chr7_2:25802625-25802644 Msa1054310:intron 20.0%
!!! TTTTTTTTTTGGTACAAAAG+AGG - chr7_2:25802658-25802677 None:intergenic 20.0%
!!! ATTTTGCTTTTATTGAAACT+TGG - chr7_2:25802711-25802730 None:intergenic 20.0%
!!! TGTTGTATTTTGTATTTATG+TGG + chr7_2:25803003-25803022 Msa1054310:intron 20.0%
!! CAATTAAAAGTTAATTACCT+TGG - chr7_2:25804000-25804019 None:intergenic 20.0%
!!! ACTATAAAATCTCATTTTGT+TGG + chr7_2:25804023-25804042 Msa1054310:intron 20.0%
!! TATAGAAATGTTATCTATAG+TGG + chr7_2:25804169-25804188 Msa1054310:CDS 20.0%
!!! ATAGTTTTAAATTGTAGTTG+CGG + chr7_2:25804311-25804330 Msa1054310:intron 20.0%
!! TAGATATAATACAATAAGCA+GGG - chr7_2:25804992-25805011 None:intergenic 20.0%
!! ATAGATATAATACAATAAGC+AGG - chr7_2:25804993-25805012 None:intergenic 20.0%
!!! ACGAAAATTTTCTGTTTTTA+TGG - chr7_2:25805440-25805459 None:intergenic 20.0%
!!! TAAAAACAGAAAATTTTCGT+CGG + chr7_2:25805440-25805459 Msa1054310:intron 20.0%
!!! TTTTGTTAATCTGCAAATAT+AGG + chr7_2:25805486-25805505 Msa1054310:intron 20.0%
!! TTTGTTAATCTGCAAATATA+GGG + chr7_2:25805487-25805506 Msa1054310:intron 20.0%
!! AATGATAATAATATTCAAGG+AGG + chr7_2:25805679-25805698 Msa1054310:CDS 20.0%
!!! CTATTTGTTTTTGACACTTT+TGG + chr7_2:25801808-25801827 Msa1054310:intron 25.0%
! TATAGAAGGTCAACAATATT+TGG - chr7_2:25801844-25801863 None:intergenic 25.0%
!! ATCCTACCAAGATAAAATTT+TGG + chr7_2:25802137-25802156 Msa1054310:CDS 25.0%
!! AACCAAAATTTTATCTTGGT+AGG - chr7_2:25802142-25802161 None:intergenic 25.0%
!! CTGAAACCAAAATTTTATCT+TGG - chr7_2:25802146-25802165 None:intergenic 25.0%
!!! AATTTTGGTTTCAGAATAGA+AGG + chr7_2:25802152-25802171 Msa1054310:CDS 25.0%
!! GCTGCAAATAACATTTTTAA+GGG - chr7_2:25802388-25802407 None:intergenic 25.0%
!! TGCTGCAAATAACATTTTTA+AGG - chr7_2:25802389-25802408 None:intergenic 25.0%
!! ACATAATTCTTTTGCATTAG+TGG - chr7_2:25802486-25802505 None:intergenic 25.0%
!!! TTTTATTGAAACTTGGTAGT+TGG - chr7_2:25802704-25802723 None:intergenic 25.0%
! CAATGTAAACCTTTCTATTA+TGG + chr7_2:25802846-25802865 Msa1054310:intron 25.0%
! TTGTAGTTAAAATGTTGTTG+CGG + chr7_2:25802904-25802923 Msa1054310:intron 25.0%
!!! GTAAACATGGTTTTAAATTG+CGG - chr7_2:25802980-25802999 None:intergenic 25.0%
! AAATACAACACAAGTAAACA+TGG - chr7_2:25802993-25803012 None:intergenic 25.0%
!!! GTGTTTGATTTTATCCATAA+AGG - chr7_2:25803254-25803273 None:intergenic 25.0%
! TTAACTGATTATTAACCCTA+GGG - chr7_2:25803322-25803341 None:intergenic 25.0%
! TTTAACTGATTATTAACCCT+AGG - chr7_2:25803323-25803342 None:intergenic 25.0%
!! AGAACTTCTTACTCTTTTAT+AGG + chr7_2:25803434-25803453 Msa1054310:intron 25.0%
! AGGAAGTAAAATTCTCTAAT+AGG - chr7_2:25803834-25803853 None:intergenic 25.0%
! TACTGTAAACAATTTGAGAA+AGG + chr7_2:25803858-25803877 Msa1054310:CDS 25.0%
! TAAACAATTTGAGAAAGGAT+GGG + chr7_2:25803863-25803882 Msa1054310:CDS 25.0%
!!! CCTCTAAAACATTTATATTG+TGG - chr7_2:25804337-25804356 None:intergenic 25.0%
!!! CCACAATATAAATGTTTTAG+AGG + chr7_2:25804334-25804353 Msa1054310:intron 25.0%
! ATCAAGTATTTAACAAACCT+GGG - chr7_2:25804737-25804756 None:intergenic 25.0%
! TAATAATAATTGAGTCTGGA+GGG - chr7_2:25804767-25804786 None:intergenic 25.0%
! ATAATAATAATTGAGTCTGG+AGG - chr7_2:25804768-25804787 None:intergenic 25.0%
!! TATCTTTGAAAAATGTGAAG+CGG + chr7_2:25804892-25804911 Msa1054310:intron 25.0%
! TGAAATACCTTAGAGTTAAA+AGG + chr7_2:25805068-25805087 Msa1054310:intron 25.0%
!!! AAGAAAACCTTTTAACTCTA+AGG - chr7_2:25805078-25805097 None:intergenic 25.0%
!!! TAGATAGAGAGACTTATTTT+AGG - chr7_2:25805332-25805351 None:intergenic 25.0%
!! GAGTTCACAAATTTTAAATG+TGG - chr7_2:25805397-25805416 None:intergenic 25.0%
! AACAGTTGCATTTCAAATTA+TGG + chr7_2:25805765-25805784 Msa1054310:CDS 25.0%
! TGTTTCTTCTAAGAGACTTA+TGG + chr7_2:25801432-25801451 Msa1054310:CDS 30.0%
TTTCTTCTGATACTCATAAG+AGG + chr7_2:25801476-25801495 Msa1054310:CDS 30.0%
GCATGCAATGTTATGATATA+CGG + chr7_2:25801625-25801644 Msa1054310:intron 30.0%
CAATGTTATGATATACGGAT+GGG + chr7_2:25801630-25801649 Msa1054310:intron 30.0%
ACCTTCTATATAGAGTTCAA+AGG + chr7_2:25801854-25801873 Msa1054310:intron 30.0%
CCTTCTATATAGAGTTCAAA+GGG + chr7_2:25801855-25801874 Msa1054310:intron 30.0%
CATATCCTGATGAAAAACAA+AGG + chr7_2:25802086-25802105 Msa1054310:intron 30.0%
GATTTCACAATGATTCTTTG+TGG + chr7_2:25802260-25802279 Msa1054310:intron 30.0%
! ACAATGATTCTTTGTGGTTT+TGG + chr7_2:25802266-25802285 Msa1054310:intron 30.0%
CATTCTCTTCTATGAGTATA+CGG - chr7_2:25802329-25802348 None:intergenic 30.0%
AAGAGAATATTGTGCATGTA+TGG - chr7_2:25802562-25802581 None:intergenic 30.0%
AAGGAAAAATCACTCATGTT+AGG + chr7_2:25803176-25803195 Msa1054310:CDS 30.0%
TGGATAAAATCAAACACTGA+TGG + chr7_2:25803257-25803276 Msa1054310:CDS 30.0%
ACATTGTTTCATAGGTTTCA+AGG - chr7_2:25803298-25803317 None:intergenic 30.0%
GACTTTGGTTGAAATGTTTA+TGG + chr7_2:25803403-25803422 Msa1054310:CDS 30.0%
AAAGAGTAAGAAGTTCTTAC+AGG - chr7_2:25803431-25803450 None:intergenic 30.0%
!! GATTGATTTTGTAGAACAAG+TGG + chr7_2:25803517-25803536 Msa1054310:intron 30.0%
ATTTCCAACTATTGTGACAA+TGG + chr7_2:25803548-25803567 Msa1054310:CDS 30.0%
ATTCAATGTGCAAGAGAAAT+TGG - chr7_2:25803748-25803767 None:intergenic 30.0%
AATTCTCTAATAGGAACAAG+TGG - chr7_2:25803825-25803844 None:intergenic 30.0%
CAAATTGTTTACAGTAACGT+AGG - chr7_2:25803854-25803873 None:intergenic 30.0%
GTAAACAATTTGAGAAAGGA+TGG + chr7_2:25803862-25803881 Msa1054310:CDS 30.0%
!! GAAGCAAAATGTTTGTTATG+AGG - chr7_2:25803915-25803934 None:intergenic 30.0%
TTCTATAGAGCATATGAACT+GGG - chr7_2:25804156-25804175 None:intergenic 30.0%
TTTCTATAGAGCATATGAAC+TGG - chr7_2:25804157-25804176 None:intergenic 30.0%
! GGTATTTTATCGCAAGATAA+AGG + chr7_2:25804389-25804408 Msa1054310:intron 30.0%
CTTTGAATGAGATTATTGTG+AGG + chr7_2:25804608-25804627 Msa1054310:CDS 30.0%
AAGAAATTGAACACAGTTTG+TGG - chr7_2:25804694-25804713 None:intergenic 30.0%
GATCAAGTATTTAACAAACC+TGG - chr7_2:25804738-25804757 None:intergenic 30.0%
CATATTAAGAGGTGAAATTC+TGG - chr7_2:25804936-25804955 None:intergenic 30.0%
CCTCACTTATTCATATTAAG+AGG - chr7_2:25804947-25804966 None:intergenic 30.0%
CCTCTTAATATGAATAAGTG+AGG + chr7_2:25804944-25804963 Msa1054310:intron 30.0%
GGATTTATGAGTTCAAACTT+TGG + chr7_2:25804965-25804984 Msa1054310:intron 30.0%
AGAATGTCTTACCTTAAACA+CGG - chr7_2:25805211-25805230 None:intergenic 30.0%
TTATGGTTTAAGTAGTCTAG+TGG - chr7_2:25805423-25805442 None:intergenic 30.0%
! AGAAAATTTTCGTCGGATTT+TGG + chr7_2:25805447-25805466 Msa1054310:intron 30.0%
CTCATTATTGATGAATCAAC+AGG - chr7_2:25805592-25805611 None:intergenic 30.0%
GGTAGTAATTGAATGTATGA+AGG - chr7_2:25805625-25805644 None:intergenic 30.0%
TACATTCAATTACTACCATC+AGG + chr7_2:25805628-25805647 Msa1054310:CDS 30.0%
CCAATAAGTCCATTAACAAT+TGG - chr7_2:25805823-25805842 None:intergenic 30.0%
!! CCAATTGTTAATGGACTTAT+TGG + chr7_2:25805820-25805839 Msa1054310:CDS 30.0%
!! TCAAAGCATCTTTTATGTGT+TGG - chr7_2:25805855-25805874 None:intergenic 30.0%
GCAATGTTATGATATACGGA+TGG + chr7_2:25801629-25801648 Msa1054310:intron 35.0%
! TTTGCTTGACGCAACTTTTA+GGG - chr7_2:25801740-25801759 None:intergenic 35.0%
AGAACACGCTTTCTCATATT+TGG - chr7_2:25801767-25801786 None:intergenic 35.0%
!! GGTCAACAATATTTGGTGTT+GGG - chr7_2:25801837-25801856 None:intergenic 35.0%
!! AGGTCAACAATATTTGGTGT+TGG - chr7_2:25801838-25801857 None:intergenic 35.0%
CCCTTTGAACTCTATATAGA+AGG - chr7_2:25801858-25801877 None:intergenic 35.0%
!!! TGCAACCTTTGTTTTTCATC+AGG - chr7_2:25802094-25802113 None:intergenic 35.0%
GAAAAACAAAGGTTGCAGTT+AGG + chr7_2:25802097-25802116 Msa1054310:intron 35.0%
! TTTTATCTTGGTAGGATCCA+TGG - chr7_2:25802134-25802153 None:intergenic 35.0%
!! TTTGTGTGTGTTTTGGACAT+GGG + chr7_2:25802219-25802238 Msa1054310:intron 35.0%
GATCTGAGAATATAGCTATG+AGG + chr7_2:25802358-25802377 Msa1054310:CDS 35.0%
TACAATATCAACCGCATCAA+GGG - chr7_2:25802889-25802908 None:intergenic 35.0%
TGGAAACTAATGAGCCTTTA+TGG + chr7_2:25803237-25803256 Msa1054310:CDS 35.0%
CTATGAAACAATGTTCCCTA+GGG + chr7_2:25803304-25803323 Msa1054310:CDS 35.0%
! ATCGAAGCTTCTAGAAATTC+TGG + chr7_2:25803359-25803378 Msa1054310:CDS 35.0%
AAACATTTCAACCAAAGTCG+AGG - chr7_2:25803402-25803421 None:intergenic 35.0%
! GATTTTGTAGAACAAGTGGA+TGG + chr7_2:25803521-25803540 Msa1054310:intron 35.0%
TTTGCCATTGTCACAATAGT+TGG - chr7_2:25803555-25803574 None:intergenic 35.0%
AGTTATATCTTCTCGAACGA+AGG + chr7_2:25803584-25803603 Msa1054310:CDS 35.0%
TCTTAGTGGTTCTTTGCAAT+TGG + chr7_2:25803611-25803630 Msa1054310:CDS 35.0%
! CATTTTGCTTCGAAATTTCG+AGG + chr7_2:25803924-25803943 Msa1054310:CDS 35.0%
TTCATCCAAAACATGCCTAA+TGG + chr7_2:25803969-25803988 Msa1054310:CDS 35.0%
! ATTTGCCATTAGGCATGTTT+TGG - chr7_2:25803977-25803996 None:intergenic 35.0%
ATTACCTTGGATTTGCCATT+AGG - chr7_2:25803987-25804006 None:intergenic 35.0%
TACTTGGATTGAACATGTTG+AGG + chr7_2:25804117-25804136 Msa1054310:CDS 35.0%
! ATCTATAGTGGAGTTGCATT+TGG + chr7_2:25804181-25804200 Msa1054310:CDS 35.0%
! TTGCATTTGGAGCTGAAAAA+TGG + chr7_2:25804194-25804213 Msa1054310:CDS 35.0%
CACTTCAAAGAATGTGTGAA+AGG + chr7_2:25804224-25804243 Msa1054310:intron 35.0%
! TGAAAGGCTTGCTTATCTTA+TGG + chr7_2:25804240-25804259 Msa1054310:intron 35.0%
ATGGATTCAAGTCATTCTAC+CGG + chr7_2:25804259-25804278 Msa1054310:intron 35.0%
ACAATTGAGGCTACATTTGT+CGG + chr7_2:25804368-25804387 Msa1054310:intron 35.0%
TTCTTGTCTTGATCTAAGTG+TGG + chr7_2:25804453-25804472 Msa1054310:intron 35.0%
CTTGATCTAAGTGTGGTTAT+TGG + chr7_2:25804460-25804479 Msa1054310:intron 35.0%
ATGCATTAGCTAGTCATAGA+TGG + chr7_2:25804572-25804591 Msa1054310:CDS 35.0%
!! CTCATTCAAAGTTGATAACG+TGG - chr7_2:25804599-25804618 None:intergenic 35.0%
AATTGAACACAGTTTGTGGA+GGG - chr7_2:25804690-25804709 None:intergenic 35.0%
AAATTGAACACAGTTTGTGG+AGG - chr7_2:25804691-25804710 None:intergenic 35.0%
TAGTCGAATGTACTTTCCAA+TGG + chr7_2:25805126-25805145 Msa1054310:intron 35.0%
CTCTTGAACATCATTACCAT+TGG - chr7_2:25805145-25805164 None:intergenic 35.0%
! CAATGGTAATGATGTTCAAG+AGG + chr7_2:25805143-25805162 Msa1054310:CDS 35.0%
TAACTGCATTTCCGTGTTTA+AGG + chr7_2:25805197-25805216 Msa1054310:CDS 35.0%
AGTCTCTCTATCTAATATGC+AGG + chr7_2:25805338-25805357 Msa1054310:intron 35.0%
GTCTCTCTATCTAATATGCA+GGG + chr7_2:25805339-25805358 Msa1054310:intron 35.0%
GATACTACAAGAAAGTTGTG+TGG + chr7_2:25805537-25805556 Msa1054310:CDS 35.0%
TGATTCATCAATAATGAGCG+AGG + chr7_2:25805594-25805613 Msa1054310:CDS 35.0%
CAAGGAGGTAATAGTGATAA+TGG + chr7_2:25805694-25805713 Msa1054310:CDS 35.0%
ACAATGATCCTCCAATGTTT+GGG - chr7_2:25805744-25805763 None:intergenic 35.0%
AACAATGATCCTCCAATGTT+TGG - chr7_2:25805745-25805764 None:intergenic 35.0%
GAGTAGTTTACCATCTAACA+TGG + chr7_2:25805789-25805808 Msa1054310:CDS 35.0%
GAGTCTGTTCCAATTGTTAA+TGG + chr7_2:25805811-25805830 Msa1054310:CDS 35.0%
TACGAGGAAACATGTATGTG+TGG + chr7_2:25801653-25801672 Msa1054310:intron 40.0%
! TTTTACCACTCGTGGGATTA+GGG + chr7_2:25801687-25801706 Msa1054310:intron 40.0%
! GTTTGCTTGACGCAACTTTT+AGG - chr7_2:25801741-25801760 None:intergenic 40.0%
ACAACAAGGTCATCACTCAT+AGG + chr7_2:25801884-25801903 Msa1054310:intron 40.0%
CCTCGTAAACACAACATTCA+TGG - chr7_2:25801911-25801930 None:intergenic 40.0%
CCATGAATGTTGTGTTTACG+AGG + chr7_2:25801908-25801927 Msa1054310:intron 40.0%
TGCAATCCAAAAAGACCTGA+TGG + chr7_2:25801939-25801958 Msa1054310:intron 40.0%
GAATAGAAGGACTCAGATGA+AGG + chr7_2:25802165-25802184 Msa1054310:CDS 40.0%
!! TTAGGGCTTTGTGTGTGTTT+TGG + chr7_2:25802212-25802231 Msa1054310:intron 40.0%
!! CTTTGTGTGTGTTTTGGACA+TGG + chr7_2:25802218-25802237 Msa1054310:intron 40.0%
AAATGCTCGACTCAAAGAAG+AGG + chr7_2:25802437-25802456 Msa1054310:CDS 40.0%
!! ATTCTAAGGCATGCAAGTGT+CGG - chr7_2:25802596-25802615 None:intergenic 40.0%
ATAGGAAAATGCCCTTGATG+CGG + chr7_2:25802875-25802894 Msa1054310:intron 40.0%
CTACAATATCAACCGCATCA+AGG - chr7_2:25802890-25802909 None:intergenic 40.0%
TTGATGAACTTCCTGGTAGA+AGG - chr7_2:25803115-25803134 None:intergenic 40.0%
!! GCAAGAGCTGATTTTGCTTA+TGG + chr7_2:25803217-25803236 Msa1054310:CDS 40.0%
CCTAGGGAACATTGTTTCAT+AGG - chr7_2:25803306-25803325 None:intergenic 40.0%
CCTATGAAACAATGTTCCCT+AGG + chr7_2:25803303-25803322 Msa1054310:CDS 40.0%
GAAGCTTCGATGCGAATATT+GGG - chr7_2:25803350-25803369 None:intergenic 40.0%
AGAAGCTTCGATGCGAATAT+TGG - chr7_2:25803351-25803370 None:intergenic 40.0%
ATATCTTCTCGAACGAAGGA+TGG + chr7_2:25803588-25803607 Msa1054310:CDS 40.0%
!! CATGTTTTGGATGAAGCAAC+CGG - chr7_2:25803964-25803983 None:intergenic 40.0%
GGTCTTTGTAACCACAATTG+AGG + chr7_2:25804355-25804374 Msa1054310:intron 40.0%
GACAAATGTAGCCTCAATTG+TGG - chr7_2:25804369-25804388 None:intergenic 40.0%
TCAGTGATTTCATCACCTGA+TGG + chr7_2:25804490-25804509 Msa1054310:intron 40.0%
TTTCATCACCTGATGGAAAG+AGG + chr7_2:25804497-25804516 Msa1054310:CDS 40.0%
! CCTTTGTGTTAGCTTCATCA+TGG - chr7_2:25804524-25804543 None:intergenic 40.0%
CCATGATGAAGCTAACACAA+AGG + chr7_2:25804521-25804540 Msa1054310:CDS 40.0%
GATGAAGCTAACACAAAGGA+TGG + chr7_2:25804525-25804544 Msa1054310:CDS 40.0%
TAAGCGCATCTACTACCATT+TGG + chr7_2:25804656-25804675 Msa1054310:CDS 40.0%
CGATGAAAGAAAAAGATCCC+AGG + chr7_2:25804717-25804736 Msa1054310:CDS 40.0%
CAGAAATGGGGGAAACAAAA+TGG - chr7_2:25805262-25805281 None:intergenic 40.0%
!! TTTTGTTTCCCCCATTTCTG+AGG + chr7_2:25805262-25805281 Msa1054310:intron 40.0%
TTTGTTTCCCCCATTTCTGA+GGG + chr7_2:25805263-25805282 Msa1054310:intron 40.0%
GGTTTAAGTAGTCTAGTGGT+TGG - chr7_2:25805419-25805438 None:intergenic 40.0%
GAAGTAATTGCGAAACCTGA+TGG - chr7_2:25805646-25805665 None:intergenic 40.0%
GGTTTCGCAATTACTTCTGA+TGG + chr7_2:25805649-25805668 Msa1054310:CDS 40.0%
ACAAGCTCAAACCCAAACAT+TGG + chr7_2:25805730-25805749 Msa1054310:CDS 40.0%
! CTTATGGAGCATCACAGTGA+AGG + chr7_2:25801448-25801467 Msa1054310:CDS 45.0%
ACACTGCTGATCAGATCCAA+AGG + chr7_2:25801521-25801540 Msa1054310:CDS 45.0%
ACTCTTACGCTTCAAGCCTT+TGG - chr7_2:25801540-25801559 None:intergenic 45.0%
ATGATATACGGATGGGTACG+AGG + chr7_2:25801637-25801656 Msa1054310:intron 45.0%
ATCCCACGAGTGGTAAAACA+CGG - chr7_2:25801685-25801704 None:intergenic 45.0%
! GTTTTACCACTCGTGGGATT+AGG + chr7_2:25801686-25801705 Msa1054310:intron 45.0%
! GATTAGGGACGTGGCTTTTA+CGG + chr7_2:25801702-25801721 Msa1054310:intron 45.0%
TCAAAGGGTCATGCACAACA+AGG + chr7_2:25801870-25801889 Msa1054310:intron 45.0%
TGATAACAAGCTGCACCATC+AGG - chr7_2:25801957-25801976 None:intergenic 45.0%
ACAAAGGTTGCAGTTAGGCA+AGG + chr7_2:25802102-25802121 Msa1054310:intron 45.0%
GTTAGGCAAGGAATTAGCCA+TGG + chr7_2:25802114-25802133 Msa1054310:CDS 45.0%
! AGAGTATCTAGCATTGCAGC+TGG + chr7_2:25803065-25803084 Msa1054310:CDS 45.0%
! GGCAATGTTGATGAACTTCC+TGG - chr7_2:25803122-25803141 None:intergenic 45.0%
!! GCAGGTTGGTAAGGAACATT+TGG - chr7_2:25803143-25803162 None:intergenic 45.0%
AATGTTCCTTACCAACCTGC+TGG + chr7_2:25803143-25803162 Msa1054310:CDS 45.0%
TATTAGAGAGACCAGCAGGT+TGG - chr7_2:25803157-25803176 None:intergenic 45.0%
! ACCTGCTGGTCTCTCTAATA+AGG + chr7_2:25803157-25803176 Msa1054310:CDS 45.0%
TCCTTATTAGAGAGACCAGC+AGG - chr7_2:25803161-25803180 None:intergenic 45.0%
TGTCATGAATGCCTCGACTT+TGG + chr7_2:25803388-25803407 Msa1054310:CDS 45.0%
! TTTTGGATGAAGCAACCGGA+AGG - chr7_2:25803960-25803979 None:intergenic 45.0%
CATGCCTAATGGCAAATCCA+AGG + chr7_2:25803980-25803999 Msa1054310:CDS 45.0%
! CATTCTACCGGTTATCTCGA+AGG + chr7_2:25804271-25804290 Msa1054310:intron 45.0%
ATCATGGTCCTCTTTCCATC+AGG - chr7_2:25804508-25804527 None:intergenic 45.0%
ACACGGAAATGCAGTTACCT+GGG - chr7_2:25805194-25805213 None:intergenic 45.0%
AACACGGAAATGCAGTTACC+TGG - chr7_2:25805195-25805214 None:intergenic 45.0%
TGAAGGACACCCTCAGAAAT+GGG - chr7_2:25805275-25805294 None:intergenic 45.0%
ATGTGGAGAAGTGAGATGTC+CGG - chr7_2:25805380-25805399 None:intergenic 45.0%
GAAAGTTGTGTGGACTCATC+AGG + chr7_2:25805547-25805566 Msa1054310:CDS 45.0%
AGCTCAAACCCAAACATTGG+AGG + chr7_2:25805733-25805752 Msa1054310:CDS 45.0%
GGAACAGACTCCATGTTAGA+TGG - chr7_2:25805802-25805821 None:intergenic 45.0%
!!! ACTTTTTTATTTTATTTTTT+AGG + chr7_2:25802047-25802066 Msa1054310:intron 5.0%
!!! CTTTTTTATTTTATTTTTTA+GGG + chr7_2:25802048-25802067 Msa1054310:intron 5.0%
!!! ATTTAAAAACATTTTTTTTT+TGG - chr7_2:25802669-25802688 None:intergenic 5.0%
!! TAAATAAAAAAACAAATAAA+TGG - chr7_2:25805238-25805257 None:intergenic 5.0%
GGATCTGATCAGCAGTGTGA+CGG - chr7_2:25801519-25801538 None:intergenic 50.0%
! TGACCGTGTTTTACCACTCG+TGG + chr7_2:25801679-25801698 Msa1054310:intron 50.0%
! GACCGTGTTTTACCACTCGT+GGG + chr7_2:25801680-25801699 Msa1054310:intron 50.0%
! GCTGCACCATCAGGTCTTTT+TGG - chr7_2:25801948-25801967 None:intergenic 50.0%
AGCATTGCAGCTGGATACAC+TGG + chr7_2:25803074-25803093 Msa1054310:CDS 50.0%
TCACTGTCACACCTTCTACC+AGG + chr7_2:25803101-25803120 Msa1054310:CDS 50.0%
! CGAACGAAGGATGGTCTTAG+TGG + chr7_2:25803597-25803616 Msa1054310:CDS 50.0%
! TCTACCGGTTATCTCGAAGG+AGG + chr7_2:25804274-25804293 Msa1054310:intron 50.0%
GCTACCTCCTTCGAGATAAC+CGG - chr7_2:25804281-25804300 None:intergenic 50.0%
GTGAGGAAGAGTCAGCCTAA+TGG + chr7_2:25804625-25804644 Msa1054310:CDS 50.0%
GAAGAGTCAGCCTAATGGTG+AGG + chr7_2:25804630-25804649 Msa1054310:CDS 50.0%
AACACAGTTTGTGGAGGGAG+AGG - chr7_2:25804685-25804704 None:intergenic 50.0%
ATAGCAAATGTTTCGCGCCC+AGG + chr7_2:25805174-25805193 Msa1054310:CDS 50.0%
AAGGACACCCTCAGAAATGG+GGG - chr7_2:25805273-25805292 None:intergenic 50.0%
GAAGGACACCCTCAGAAATG+GGG - chr7_2:25805274-25805293 None:intergenic 50.0%
CTGAAGGACACCCTCAGAAA+TGG - chr7_2:25805276-25805295 None:intergenic 50.0%
CTACGTCACAGTTGAGCTGA+AGG - chr7_2:25805292-25805311 None:intergenic 50.0%
TCAGCTCAACTGTGACGTAG+AGG + chr7_2:25805292-25805311 Msa1054310:intron 50.0%
AGGGATCAGAGTTCGAATCC+CGG + chr7_2:25805358-25805377 Msa1054310:intron 50.0%
TGTGGAGAAGTGAGATGTCC+GGG - chr7_2:25805379-25805398 None:intergenic 50.0%
GGACTCATCAGGTTCACTTG+TGG + chr7_2:25805558-25805577 Msa1054310:CDS 50.0%
!! GAGAGACCAGCAGGTTGGTA+AGG - chr7_2:25803152-25803171 None:intergenic 55.0%
AGCAACCGGAAGGAAGACGA+AGG - chr7_2:25803950-25803969 None:intergenic 55.0%
GCGCTTAGCACCTCACCATT+AGG - chr7_2:25804643-25804662 None:intergenic 55.0%
TGGAGGGAGAGGTAGCCAAA+TGG - chr7_2:25804674-25804693 None:intergenic 55.0%
CACGTCCCTAATCCCACGAG+TGG - chr7_2:25801695-25801714 None:intergenic 60.0%
CACTCGTGGGATTAGGGACG+TGG + chr7_2:25801693-25801712 Msa1054310:intron 60.0%
CGAGGCCTTCGTCTTCCTTC+CGG + chr7_2:25803942-25803961 Msa1054310:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 25801409 25805888 25801409 ID=Msa1054310;Name=Msa1054310
chr7_2 mRNA 25801409 25805888 25801409 ID=Msa1054310-mRNA-1;Parent=Msa1054310;Name=Msa1054310-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|1|1|10|0|632
chr7_2 exon 25801409 25801551 25801409 ID=Msa1054310-mRNA-1:exon:5585;Parent=Msa1054310-mRNA-1
chr7_2 exon 25802108 25802186 25802108 ID=Msa1054310-mRNA-1:exon:5586;Parent=Msa1054310-mRNA-1
chr7_2 exon 25802303 25802458 25802303 ID=Msa1054310-mRNA-1:exon:5587;Parent=Msa1054310-mRNA-1
chr7_2 exon 25803059 25803430 25803059 ID=Msa1054310-mRNA-1:exon:5588;Parent=Msa1054310-mRNA-1
chr7_2 exon 25803531 25803632 25803531 ID=Msa1054310-mRNA-1:exon:5589;Parent=Msa1054310-mRNA-1
chr7_2 exon 25803795 25804001 25803795 ID=Msa1054310-mRNA-1:exon:5590;Parent=Msa1054310-mRNA-1
chr7_2 exon 25804115 25804238 25804115 ID=Msa1054310-mRNA-1:exon:5591;Parent=Msa1054310-mRNA-1
chr7_2 exon 25804494 25804738 25804494 ID=Msa1054310-mRNA-1:exon:5592;Parent=Msa1054310-mRNA-1
chr7_2 exon 25805129 25805218 25805129 ID=Msa1054310-mRNA-1:exon:5593;Parent=Msa1054310-mRNA-1
chr7_2 exon 25805508 25805888 25805508 ID=Msa1054310-mRNA-1:exon:5594;Parent=Msa1054310-mRNA-1
chr7_2 CDS 25801409 25801551 25801409 ID=Msa1054310-mRNA-1:cds;Parent=Msa1054310-mRNA-1
chr7_2 CDS 25802108 25802186 25802108 ID=Msa1054310-mRNA-1:cds;Parent=Msa1054310-mRNA-1
chr7_2 CDS 25802303 25802458 25802303 ID=Msa1054310-mRNA-1:cds;Parent=Msa1054310-mRNA-1
chr7_2 CDS 25803059 25803430 25803059 ID=Msa1054310-mRNA-1:cds;Parent=Msa1054310-mRNA-1
chr7_2 CDS 25803531 25803632 25803531 ID=Msa1054310-mRNA-1:cds;Parent=Msa1054310-mRNA-1
chr7_2 CDS 25803795 25804001 25803795 ID=Msa1054310-mRNA-1:cds;Parent=Msa1054310-mRNA-1
chr7_2 CDS 25804115 25804238 25804115 ID=Msa1054310-mRNA-1:cds;Parent=Msa1054310-mRNA-1
chr7_2 CDS 25804494 25804738 25804494 ID=Msa1054310-mRNA-1:cds;Parent=Msa1054310-mRNA-1
chr7_2 CDS 25805129 25805218 25805129 ID=Msa1054310-mRNA-1:cds;Parent=Msa1054310-mRNA-1
chr7_2 CDS 25805508 25805888 25805508 ID=Msa1054310-mRNA-1:cds;Parent=Msa1054310-mRNA-1
Gene Sequence

>Msa1054310

ATGGAGCATCACAGTGAAGGAAGTGTTTCTTCTAAGAGACTTATGGAGCATCACAGTGAAGGAAGTGTTTCTTCTGATACTCATAAGAGGAAGAAACGTCGTTGCAACCGTCACACTGCTGATCAGATCCAAAGGCTTGAAGCGTTGCAGTTAGGCAAGGAATTAGCCATGGATCCTACCAAGATAAAATTTTGGTTTCAGAATAGAAGGACTCAGATGAAGACACAACAAGAAAGAGATGATAACCGTATACTCATAGAAGAGAATGATAAAATAAGATCTGAGAATATAGCTATGAGGCAAGCCCTTAAAAATGTTATTTGCAGCACTTGTGATGAACAAAAGTTGAGAATTGAAAATGCTCGACTCAAAGAAGAGCTTGTTAGAGTATCTAGCATTGCAGCTGGATACACTGGAAAATCACTGTCACACCTTCTACCAGGAAGTTCATCAACATTGCCAAATGTTCCTTACCAACCTGCTGGTCTCTCTAATAAGGAAAAATCACTCATGTTAGGCATTGCTGAAAATGCAATGCAAGAGCTGATTTTGCTTATGGAAACTAATGAGCCTTTATGGATAAAATCAAACACTGATGGAAGAGATACTCTTAACCTTGAAACCTATGAAACAATGTTCCCTAGGGTTAATAATCAGTTAAAGAATCCCAATATTCGCATCGAAGCTTCTAGAAATTCTGGTGATGTTGTCATGAATGCCTCGACTTTGGTTGAAATGTTTATGGATCCTAACAAGTGGATGGAGCTATTTCCAACTATTGTGACAATGGCAAAGACTATTGAAGTTATATCTTCTCGAACGAAGGATGGTCTTAGTGGTTCTTTGCAATTGATGTATGAAGAGTTGCAAGTGCTTTCACCACTTGTTCCTATTAGAGAATTTTACTTCCTACGTTACTGTAAACAATTTGAGAAAGGATGGGCAATAGTTGATGTTTCGTATGAATTTCCTCATAACAAACATTTTGCTTCGAAATTTCGAGGCCTTCGTCTTCCTTCCGGTTGCTTCATCCAAAACATGCCTAATGGCAAATCCAAGGTTACTTGGATTGAACATGTTGAGGTTGAAGACATAAACCCAGTTCATATGCTCTATAGAAATGTTATCTATAGTGGAGTTGCATTTGGAGCTGAAAAATGGCTCACTGCACTTCAAAGAATGTTGATTTCATCACCTGATGGAAAGAGGACCATGATGAAGCTAACACAAAGGATGGTAACTAATTTCTGTGAAAGTATAAATGCATTAGCTAGTCATAGATGGACCACGTTATCAACTTTGAATGAGATTATTGTGAGGAAGAGTCAGCCTAATGGTGAGGTGCTAAGCGCATCTACTACCATTTGGCTACCTCTCCCTCCACAAACTGTGTTCAATTTCTTGAACGATGAAAGAAAAAGATCCCAGTCGAATGTACTTTCCAATGGTAATGATGTTCAAGAGGTTGTTCATATAGCAAATGTTTCGCGCCCAGGTAACTGCATTTCCGTGTTTAAGGGTTTCAACACAAGTAACAACAACATGTTGATACTACAAGAAAGTTGTGTGGACTCATCAGGTTCACTTGTGGTGTCTTGTCCTGTTGATTCATCAATAATGAGCGAGGTAGATCCTTCATACATTCAATTACTACCATCAGGTTTCGCAATTACTTCTGATGGAAAGCAAAATGATAATAATATTCAAGGAGGTAATAGTGATAATGGTGATGTTGCATCAACAAGCTCAAACCCAAACATTGGAGGATCATTGTTAACAGTTGCATTTCAAATTATGGTGAGTAGTTTACCATCTAACATGGAGTCTGTTCCAATTGTTAATGGACTTATTGGTAAGACTGTCCAACACATAAAAGATGCTTTGAATTGTCCTGTGTAG
Protein sequence

>Msa1054310

MEHHSEGSVSSKRLMEHHSEGSVSSDTHKRKKRRCNRHTADQIQRLEALQLGKELAMDPTKIKFWFQNRRTQMKTQQERDDNRILIEENDKIRSENIAMRQALKNVICSTCDEQKLRIENARLKEELVRVSSIAAGYTGKSLSHLLPGSSSTLPNVPYQPAGLSNKEKSLMLGIAENAMQELILLMETNEPLWIKSNTDGRDTLNLETYETMFPRVNNQLKNPNIRIEASRNSGDVVMNASTLVEMFMDPNKWMELFPTIVTMAKTIEVISSRTKDGLSGSLQLMYEELQVLSPLVPIREFYFLRYCKQFEKGWAIVDVSYEFPHNKHFASKFRGLRLPSGCFIQNMPNGKSKVTWIEHVEVEDINPVHMLYRNVIYSGVAFGAEKWLTALQRMLISSPDGKRTMMKLTQRMVTNFCESINALASHRWTTLSTLNEIIVRKSQPNGEVLSASTTIWLPLPPQTVFNFLNDERKRSQSNVLSNGNDVQEVVHIANVSRPGNCISVFKGFNTSNNNMLILQESCVDSSGSLVVSCPVDSSIMSEVDPSYIQLLPSGFAITSDGKQNDNNIQGGNSDNGDVASTSSNPNIGGSLLTVAFQIMVSSLPSNMESVPIVNGLIGKTVQHIKDALNCPV*