Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055160 | XP_003631114.1 | 88.136 | 59 | 7 | 0 | 366 | 424 | 167 | 225 | 1.57e-22 | 112 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055160 | sp|Q9MUK5|TOC64_PEA | 62.791 | 86 | 18 | 1 | 351 | 422 | 136 | 221 | 7.04e-24 | 107 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055160 | G7LE58 | 88.136 | 59 | 7 | 0 | 366 | 424 | 167 | 225 | 7.48e-23 | 112 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055160 | MtrunA17_Chr8g0393041 | 88.136 | 59 | 7 | 0 | 366 | 424 | 167 | 225 | 1.44e-26 | 112 |
| Msa1055160 | MtrunA17_Chr5g0397931 | 72.881 | 59 | 14 | 1 | 295 | 351 | 483 | 541 | 3.75e-20 | 93.2 |
| Msa1055160 | MtrunA17_Chr6g0453261 | 66.667 | 87 | 29 | 0 | 111 | 197 | 94 | 180 | 1.56e-18 | 88.2 |
| Msa1055160 | MtrunA17_Chr1g0191741 | 53.448 | 58 | 27 | 0 | 367 | 424 | 132 | 189 | 3.35e-14 | 73.9 |
| Msa1055160 | MtrunA17_Chr4g0050371 | 57.407 | 54 | 23 | 0 | 367 | 420 | 178 | 231 | 3.36e-13 | 71.6 |
| Msa1055160 | MtrunA17_Chr1g0151541 | 51.351 | 74 | 28 | 2 | 295 | 360 | 723 | 796 | 2.29e-12 | 69.3 |
| Msa1055160 | MtrunA17_Chr4g0068411 | 52.542 | 59 | 26 | 1 | 295 | 351 | 520 | 578 | 8.00e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055160 | AT3G17970.2 | 62.712 | 59 | 22 | 0 | 366 | 424 | 162 | 220 | 3.49e-19 | 90.5 |
| Msa1055160 | AT3G17970.1 | 62.712 | 59 | 22 | 0 | 366 | 424 | 162 | 220 | 3.91e-19 | 90.1 |
| Msa1055160 | AT5G09420.1 | 60.714 | 56 | 22 | 0 | 366 | 421 | 175 | 230 | 7.03e-15 | 77.0 |
| Msa1055160 | AT1G08980.1 | 52.381 | 63 | 30 | 0 | 367 | 429 | 133 | 195 | 4.38e-13 | 71.2 |
| Msa1055160 | AT4G23050.2 | 52.542 | 59 | 26 | 1 | 295 | 351 | 528 | 586 | 7.09e-12 | 67.8 |
| Msa1055160 | AT4G23050.1 | 52.542 | 59 | 26 | 1 | 295 | 351 | 527 | 585 | 7.21e-12 | 67.8 |
| Msa1055160 | AT1G67890.1 | 50.847 | 59 | 27 | 1 | 295 | 351 | 547 | 605 | 1.36e-11 | 67.0 |
| Msa1055160 | AT1G67890.4 | 50.847 | 59 | 27 | 1 | 295 | 351 | 419 | 477 | 1.46e-11 | 67.0 |
| Msa1055160 | AT1G67890.3 | 50.847 | 59 | 27 | 1 | 295 | 351 | 547 | 605 | 1.53e-11 | 67.0 |
| Msa1055160 | AT1G67890.2 | 50.847 | 59 | 27 | 1 | 295 | 351 | 547 | 605 | 1.53e-11 | 67.0 |
Find 108 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTCGATCCGGTGGTTTATT+TGG | 0.138656 | 7_2:-28688977 | None:intergenic |
| TTTCTTTGATAAAGGAAAAT+TGG | 0.209588 | 7_2:+28688596 | Msa1055160:CDS |
| CTGCAAATCCACAGAAAGTT+TGG | 0.253643 | 7_2:+28688048 | Msa1055160:CDS |
| TCAAAGACTTTCTTTGATAA+AGG | 0.262285 | 7_2:+28688588 | Msa1055160:CDS |
| AGGAAAGAACTCTGTGATTA+TGG | 0.291331 | 7_2:-28688834 | None:intergenic |
| AGCAATCAAGTGAGTTAATT+AGG | 0.306294 | 7_2:+28687977 | Msa1055160:CDS |
| ATGAGGGTGATGGGTGTTCT+AGG | 0.323726 | 7_2:-28688515 | None:intergenic |
| TTGAAGATAATTTATTCCTT+TGG | 0.346376 | 7_2:-28688939 | None:intergenic |
| TCTATTGAACGTGGTTGTTA+TGG | 0.353509 | 7_2:+28688330 | Msa1055160:CDS |
| CCAACTCTACGCAGTATATC+AGG | 0.360852 | 7_2:-28689154 | None:intergenic |
| TATAGACACTAACAACATTC+CGG | 0.367420 | 7_2:+28688110 | Msa1055160:CDS |
| GCTGGATTCCGTGGGATACT+TGG | 0.368997 | 7_2:+28689043 | Msa1055160:CDS |
| TGAACCCTAATAACCGGAAT+TGG | 0.376599 | 7_2:-28687519 | None:intergenic |
| TCAACAAGTCTGGACACTAT+TGG | 0.384191 | 7_2:+28689115 | Msa1055160:CDS |
| GTTGCTTGTTCATCTATTGA+TGG | 0.394365 | 7_2:+28688546 | Msa1055160:CDS |
| AGTGATGATGCTGGTGAAAC+TGG | 0.394792 | 7_2:+28688006 | Msa1055160:CDS |
| AGTGTTGTTGAAAACGAAAA+TGG | 0.402970 | 7_2:+28688228 | Msa1055160:CDS |
| GGCAGAGAGGGAACGAAGTC+CGG | 0.403343 | 7_2:-28688453 | None:intergenic |
| CACTTTGTGATGGAGCAAAT+AGG | 0.403784 | 7_2:+28687935 | Msa1055160:CDS |
| ATAGACACTAACAACATTCC+GGG | 0.406387 | 7_2:+28688111 | Msa1055160:CDS |
| TTGTCCAATGGTAACCGATC+AGG | 0.413275 | 7_2:+28688395 | Msa1055160:CDS |
| AGATGAACAAGCAACATGTT+TGG | 0.413737 | 7_2:-28688538 | None:intergenic |
| ATTGGTTCTCCTCCTCTGTT+CGG | 0.420407 | 7_2:-28687501 | None:intergenic |
| TATTGATGGCCGAACACTGC+TGG | 0.428258 | 7_2:+28688560 | Msa1055160:CDS |
| CATGGTAGCCTGAGCGGTGG+GGG | 0.450450 | 7_2:-28688474 | None:intergenic |
| CATACCCGTTTCAACAAGTC+TGG | 0.453788 | 7_2:+28689105 | Msa1055160:CDS |
| ATCTAACGTTAGACATCAAA+AGG | 0.455033 | 7_2:+28688891 | Msa1055160:CDS |
| CGAATCTGTTGTTAGTATTG+AGG | 0.456603 | 7_2:+28687891 | Msa1055160:intron |
| CAGAGGAGGAGAACCAATTC+CGG | 0.457954 | 7_2:+28687506 | Msa1055160:CDS |
| GCCATGGTAGCCTGAGCGGT+GGG | 0.467429 | 7_2:-28688476 | None:intergenic |
| CATTCTTCCCAAACTTTCTG+TGG | 0.468295 | 7_2:-28688056 | None:intergenic |
| TGCAAATCCACAGAAAGTTT+GGG | 0.468905 | 7_2:+28688049 | Msa1055160:CDS |
| TCTTGTGAAGTGTTCTGAAA+AGG | 0.470377 | 7_2:-28688865 | None:intergenic |
| GTTATTGATATCAAGCGAAA+AGG | 0.471029 | 7_2:+28688372 | Msa1055160:CDS |
| TTGATGAATCCAGCAGTGTT+CGG | 0.478417 | 7_2:-28688569 | None:intergenic |
| AGTCCGGTGGATCTGATAGA+TGG | 0.480139 | 7_2:-28688437 | None:intergenic |
| CGTGGTAAGAGTCATGGTTA+TGG | 0.482766 | 7_2:-28687410 | None:intergenic |
| CACTATTGGTTGGTTTGCAA+AGG | 0.484627 | 7_2:+28689129 | Msa1055160:CDS |
| AGAGGGGTGAGAGTGCCTGC+TGG | 0.491825 | 7_2:+28689025 | Msa1055160:CDS |
| CTTTGATAAAGGAAAATTGG+AGG | 0.492719 | 7_2:+28688599 | Msa1055160:CDS |
| ACACCATATATTCTCAGAAA+AGG | 0.493278 | 7_2:+28688807 | Msa1055160:CDS |
| GTGTCCAGACTTGTTGAAAC+GGG | 0.494320 | 7_2:-28689109 | None:intergenic |
| CATGTAGTAACACGTCGATC+CGG | 0.498411 | 7_2:-28688989 | None:intergenic |
| TAATCACAGAGTTCTTTCCT+AGG | 0.502454 | 7_2:+28688837 | Msa1055160:CDS |
| TGTCCAATGGTAACCGATCA+GGG | 0.505452 | 7_2:+28688396 | Msa1055160:CDS |
| ATATTGCTTCCTTGCAATCC+CGG | 0.514677 | 7_2:-28688129 | None:intergenic |
| TCATCTGTAGGCATTAATCA+AGG | 0.515128 | 7_2:+28688306 | Msa1055160:CDS |
| CCCCACCGCTCAGGCTACCA+TGG | 0.524913 | 7_2:+28688475 | Msa1055160:CDS |
| AATCACAGAGTTCTTTCCTA+GGG | 0.528477 | 7_2:+28688838 | Msa1055160:CDS |
| CCATGGTAGCCTGAGCGGTG+GGG | 0.532858 | 7_2:-28688475 | None:intergenic |
| CACATGGTTTCACTTTGTGA+TGG | 0.533169 | 7_2:+28687925 | Msa1055160:CDS |
| CATGTTTGGATGAGGGTGAT+GGG | 0.533651 | 7_2:-28688524 | None:intergenic |
| AGTGTCCAGACTTGTTGAAA+CGG | 0.534842 | 7_2:-28689110 | None:intergenic |
| CAAAGATTTATCAGATCAGA+TGG | 0.540218 | 7_2:+28687437 | Msa1055160:CDS |
| TCTAGAGAAAGGTTCTTCCA+TGG | 0.543236 | 7_2:+28688194 | Msa1055160:CDS |
| AGTGAGTCAAATCTAGAGAA+AGG | 0.545017 | 7_2:+28688183 | Msa1055160:CDS |
| AACAACATTCCGGGATTGCA+AGG | 0.548510 | 7_2:+28688120 | Msa1055160:CDS |
| TGATGTCGTGGTAAGAGTCA+TGG | 0.552197 | 7_2:-28687416 | None:intergenic |
| AGTATCCCACGGAATCCAGC+AGG | 0.553674 | 7_2:-28689040 | None:intergenic |
| ACATGTGACGTTTCATCTGT+AGG | 0.554089 | 7_2:+28688294 | Msa1055160:CDS |
| AGCCATGGTAGCCTGAGCGG+TGG | 0.555339 | 7_2:-28688477 | None:intergenic |
| CTAGAGAAAGGTTCTTCCAT+GGG | 0.556010 | 7_2:+28688195 | Msa1055160:CDS |
| GGACTGTGTTGCATTACAAA+GGG | 0.557662 | 7_2:-28689198 | None:intergenic |
| CAAGTCTGGACACTATTGGT+TGG | 0.562352 | 7_2:+28689119 | Msa1055160:CDS |
| CGCTTGATATCAATAACAAG+CGG | 0.562508 | 7_2:-28688366 | None:intergenic |
| AGAGTGCCTGCTGGATTCCG+TGG | 0.563237 | 7_2:+28689034 | Msa1055160:CDS |
| CCTGATATACTGCGTAGAGT+TGG | 0.571803 | 7_2:+28689154 | Msa1055160:CDS |
| ACATGTTTGGATGAGGGTGA+TGG | 0.573088 | 7_2:-28688525 | None:intergenic |
| GGGACTGTGTTGCATTACAA+AGG | 0.573217 | 7_2:-28689199 | None:intergenic |
| AACACTGCCGCTGTTACCCA+TGG | 0.575123 | 7_2:-28688211 | None:intergenic |
| CTGATAAATCTTTGATGTCG+TGG | 0.583912 | 7_2:-28687428 | None:intergenic |
| GGTTTATTTGGCAACGACGG+TGG | 0.587615 | 7_2:-28688965 | None:intergenic |
| CATCAAAAGGCATCTTAGCA+TGG | 0.590160 | 7_2:+28688904 | Msa1055160:CDS |
| TTGCCATCTATCAGATCCAC+CGG | 0.596377 | 7_2:+28688434 | Msa1055160:CDS |
| TAAACTGCGTGTTGTAGCCA+TGG | 0.597395 | 7_2:-28688492 | None:intergenic |
| AAGGAAAATTGGAGGAACAA+AGG | 0.597613 | 7_2:+28688607 | Msa1055160:CDS |
| GATGGCGGTGTGGACAGCTA+AGG | 0.600297 | 7_2:+28687455 | Msa1055160:CDS |
| AGAAACAAACCGAACAGAGG+AGG | 0.605035 | 7_2:+28687492 | Msa1055160:CDS |
| CATGTGTTGATACTTCTAGA+GGG | 0.605370 | 7_2:+28689008 | Msa1055160:CDS |
| ATGGCTCTCGACGTTGCCAA+AGG | 0.607066 | 7_2:+28688923 | Msa1055160:CDS |
| ATCGAAATCCAAGTATCCCA+CGG | 0.609479 | 7_2:-28689051 | None:intergenic |
| ACAAGCAACATGTTTGGATG+AGG | 0.614139 | 7_2:-28688532 | None:intergenic |
| ACATGTGTTGATACTTCTAG+AGG | 0.616849 | 7_2:+28689007 | Msa1055160:CDS |
| TCCAATGGTAACCGATCAGG+GGG | 0.616945 | 7_2:+28688398 | Msa1055160:CDS |
| GTCGTTGCCAAATAAACCAC+CGG | 0.617074 | 7_2:+28688970 | Msa1055160:CDS |
| GTAGTAACACGTCGATCCGG+TGG | 0.629540 | 7_2:-28688986 | None:intergenic |
| CAAGCGAAAAGGTTGTCCAA+TGG | 0.631069 | 7_2:+28688383 | Msa1055160:CDS |
| GGATCTGATAGATGGCAAGA+AGG | 0.634442 | 7_2:-28688429 | None:intergenic |
| AGGAACAATAGTGATGATGC+TGG | 0.639339 | 7_2:+28687997 | Msa1055160:CDS |
| TGAGGAGACTGATGAGCACA+TGG | 0.640514 | 7_2:+28687909 | Msa1055160:CDS |
| GTCCAATGGTAACCGATCAG+GGG | 0.643288 | 7_2:+28688397 | Msa1055160:CDS |
| GTTCTGAAAAGGCTTCCCCT+AGG | 0.643879 | 7_2:-28688854 | None:intergenic |
| AATCAAGGTTCTATTGAACG+TGG | 0.648501 | 7_2:+28688321 | Msa1055160:CDS |
| GGTGGTTTATTTGGCAACGA+CGG | 0.659116 | 7_2:-28688968 | None:intergenic |
| GGTAAGAGTCATGGTTATGG+CGG | 0.661065 | 7_2:-28687407 | None:intergenic |
| ATCACAGAGTTCTTTCCTAG+GGG | 0.664636 | 7_2:+28688839 | Msa1055160:CDS |
| CAAGCAACATGTTTGGATGA+GGG | 0.665304 | 7_2:-28688531 | None:intergenic |
| GAGTGCCTGCTGGATTCCGT+GGG | 0.666541 | 7_2:+28689035 | Msa1055160:CDS |
| TGGGAGATCAACTCATGACG+AGG | 0.667625 | 7_2:+28687374 | Msa1055160:CDS |
| ACGTGGTTGTTATGGCACAA+AGG | 0.670924 | 7_2:+28688338 | Msa1055160:CDS |
| GGTTCTTCCATGGGTAACAG+CGG | 0.676887 | 7_2:+28688204 | Msa1055160:CDS |
| AACAGAAACAAACCGAACAG+AGG | 0.677475 | 7_2:+28687489 | Msa1055160:CDS |
| AGAGAGGGAACGAAGTCCGG+TGG | 0.680909 | 7_2:-28688450 | None:intergenic |
| GGGAGATCAACTCATGACGA+GGG | 0.681462 | 7_2:+28687375 | Msa1055160:CDS |
| ATGTGTTGATACTTCTAGAG+GGG | 0.688463 | 7_2:+28689009 | Msa1055160:CDS |
| TGTAGCCATGGTAGCCTGAG+CGG | 0.708657 | 7_2:-28688480 | None:intergenic |
| TATCAGATCAGATGGCGGTG+TGG | 0.714560 | 7_2:+28687445 | Msa1055160:CDS |
| AGATTTATCAGATCAGATGG+CGG | 0.730699 | 7_2:+28687440 | Msa1055160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATCTTTGTTGTAACAAAA+CGG | - | chr7_2:28687687-28687706 | None:intergenic | 20.0% |
| !! | TTTCTTTGATAAAGGAAAAT+TGG | + | chr7_2:28688596-28688615 | Msa1055160:CDS | 20.0% |
| !! | CTATGAAAAACAATACATTT+AGG | - | chr7_2:28688787-28688806 | None:intergenic | 20.0% |
| !! | TTGAAGATAATTTATTCCTT+TGG | - | chr7_2:28688942-28688961 | None:intergenic | 20.0% |
| !!! | TAATCTTTGTTGTAACAAAA+CGG | - | chr7_2:28687687-28687706 | None:intergenic | 20.0% |
| !! | TTTCTTTGATAAAGGAAAAT+TGG | + | chr7_2:28688596-28688615 | Msa1055160:CDS | 20.0% |
| !! | CTATGAAAAACAATACATTT+AGG | - | chr7_2:28688787-28688806 | None:intergenic | 20.0% |
| !! | TTGAAGATAATTTATTCCTT+TGG | - | chr7_2:28688942-28688961 | None:intergenic | 20.0% |
| ! | TTATTATGAACCCTAATAAC+CGG | - | chr7_2:28687528-28687547 | None:intergenic | 25.0% |
| !!! | CACAGCTTTATTTTGATTTT+TGG | - | chr7_2:28687572-28687591 | None:intergenic | 25.0% |
| ! | TCAACTTTGTGTAATATCTA+CGG | - | chr7_2:28687617-28687636 | None:intergenic | 25.0% |
| ! | TAGATATTACACAAAGTTGA+AGG | + | chr7_2:28687617-28687636 | Msa1055160:intron | 25.0% |
| ! | TTGAATTGGAGATTTCAAAT+TGG | - | chr7_2:28687653-28687672 | None:intergenic | 25.0% |
| ! | TCAAAGACTTTCTTTGATAA+AGG | + | chr7_2:28688588-28688607 | Msa1055160:CDS | 25.0% |
| ! | GGTGCTTGTAAAAATATATA+TGG | - | chr7_2:28689180-28689199 | None:intergenic | 25.0% |
| ! | TTATTATGAACCCTAATAAC+CGG | - | chr7_2:28687528-28687547 | None:intergenic | 25.0% |
| !!! | CACAGCTTTATTTTGATTTT+TGG | - | chr7_2:28687572-28687591 | None:intergenic | 25.0% |
| ! | TCAACTTTGTGTAATATCTA+CGG | - | chr7_2:28687617-28687636 | None:intergenic | 25.0% |
| ! | TAGATATTACACAAAGTTGA+AGG | + | chr7_2:28687617-28687636 | Msa1055160:intron | 25.0% |
| ! | TTGAATTGGAGATTTCAAAT+TGG | - | chr7_2:28687653-28687672 | None:intergenic | 25.0% |
| ! | TCAAAGACTTTCTTTGATAA+AGG | + | chr7_2:28688588-28688607 | Msa1055160:CDS | 25.0% |
| ! | GGTGCTTGTAAAAATATATA+TGG | - | chr7_2:28689180-28689199 | None:intergenic | 25.0% |
| CAAAGATTTATCAGATCAGA+TGG | + | chr7_2:28687437-28687456 | Msa1055160:CDS | 30.0% | |
| ATAAAGCTGTGAATCTGATT+TGG | + | chr7_2:28687581-28687600 | Msa1055160:intron | 30.0% | |
| CGGACAACAATATATTGAAT+TGG | - | chr7_2:28687667-28687686 | None:intergenic | 30.0% | |
| CTCAATACTAACAACAGATT+CGG | - | chr7_2:28687893-28687912 | None:intergenic | 30.0% | |
| AGCAATCAAGTGAGTTAATT+AGG | + | chr7_2:28687977-28687996 | Msa1055160:CDS | 30.0% | |
| TATAGACACTAACAACATTC+CGG | + | chr7_2:28688110-28688129 | Msa1055160:CDS | 30.0% | |
| ! | AGTGTTGTTGAAAACGAAAA+TGG | + | chr7_2:28688228-28688247 | Msa1055160:CDS | 30.0% |
| GTTATTGATATCAAGCGAAA+AGG | + | chr7_2:28688372-28688391 | Msa1055160:CDS | 30.0% | |
| CTTTGATAAAGGAAAATTGG+AGG | + | chr7_2:28688599-28688618 | Msa1055160:CDS | 30.0% | |
| !!! | TAGTGTTTTTTGCTGATACA+TGG | - | chr7_2:28688741-28688760 | None:intergenic | 30.0% |
| ACACCATATATTCTCAGAAA+AGG | + | chr7_2:28688807-28688826 | Msa1055160:CDS | 30.0% | |
| ATCTAACGTTAGACATCAAA+AGG | + | chr7_2:28688891-28688910 | Msa1055160:CDS | 30.0% | |
| CAAAGATTTATCAGATCAGA+TGG | + | chr7_2:28687437-28687456 | Msa1055160:CDS | 30.0% | |
| ATAAAGCTGTGAATCTGATT+TGG | + | chr7_2:28687581-28687600 | Msa1055160:intron | 30.0% | |
| CGGACAACAATATATTGAAT+TGG | - | chr7_2:28687667-28687686 | None:intergenic | 30.0% | |
| CTCAATACTAACAACAGATT+CGG | - | chr7_2:28687893-28687912 | None:intergenic | 30.0% | |
| AGCAATCAAGTGAGTTAATT+AGG | + | chr7_2:28687977-28687996 | Msa1055160:CDS | 30.0% | |
| TATAGACACTAACAACATTC+CGG | + | chr7_2:28688110-28688129 | Msa1055160:CDS | 30.0% | |
| ! | AGTGTTGTTGAAAACGAAAA+TGG | + | chr7_2:28688228-28688247 | Msa1055160:CDS | 30.0% |
| GTTATTGATATCAAGCGAAA+AGG | + | chr7_2:28688372-28688391 | Msa1055160:CDS | 30.0% | |
| CTTTGATAAAGGAAAATTGG+AGG | + | chr7_2:28688599-28688618 | Msa1055160:CDS | 30.0% | |
| !!! | TAGTGTTTTTTGCTGATACA+TGG | - | chr7_2:28688741-28688760 | None:intergenic | 30.0% |
| ACACCATATATTCTCAGAAA+AGG | + | chr7_2:28688807-28688826 | Msa1055160:CDS | 30.0% | |
| ATCTAACGTTAGACATCAAA+AGG | + | chr7_2:28688891-28688910 | Msa1055160:CDS | 30.0% | |
| CTGATAAATCTTTGATGTCG+TGG | - | chr7_2:28687431-28687450 | None:intergenic | 35.0% | |
| AGATTTATCAGATCAGATGG+CGG | + | chr7_2:28687440-28687459 | Msa1055160:CDS | 35.0% | |
| AGAACCAATTCCGGTTATTA+GGG | + | chr7_2:28687515-28687534 | Msa1055160:intron | 35.0% | |
| TTCTGCAAGCATGTCTTAAA+AGG | - | chr7_2:28687722-28687741 | None:intergenic | 35.0% | |
| AATTCTTACGTTGTTGAACG+AGG | + | chr7_2:28687812-28687831 | Msa1055160:intron | 35.0% | |
| !! | GATTCGGTGATTGAATGTTA+CGG | - | chr7_2:28687877-28687896 | None:intergenic | 35.0% |
| CGAATCTGTTGTTAGTATTG+AGG | + | chr7_2:28687891-28687910 | Msa1055160:intron | 35.0% | |
| TGCAAATCCACAGAAAGTTT+GGG | + | chr7_2:28688049-28688068 | Msa1055160:CDS | 35.0% | |
| ATAGACACTAACAACATTCC+GGG | + | chr7_2:28688111-28688130 | Msa1055160:CDS | 35.0% | |
| AGTGAGTCAAATCTAGAGAA+AGG | + | chr7_2:28688183-28688202 | Msa1055160:CDS | 35.0% | |
| ! | TCTGCCCATTCTAGAAAAAA+GGG | + | chr7_2:28688270-28688289 | Msa1055160:CDS | 35.0% |
| !!! | TGTCCCCTTTTTTCTAGAAT+GGG | - | chr7_2:28688277-28688296 | None:intergenic | 35.0% |
| !!! | ATGTCCCCTTTTTTCTAGAA+TGG | - | chr7_2:28688278-28688297 | None:intergenic | 35.0% |
| TCATCTGTAGGCATTAATCA+AGG | + | chr7_2:28688306-28688325 | Msa1055160:CDS | 35.0% | |
| AATCAAGGTTCTATTGAACG+TGG | + | chr7_2:28688321-28688340 | Msa1055160:CDS | 35.0% | |
| TCTATTGAACGTGGTTGTTA+TGG | + | chr7_2:28688330-28688349 | Msa1055160:CDS | 35.0% | |
| CGCTTGATATCAATAACAAG+CGG | - | chr7_2:28688369-28688388 | None:intergenic | 35.0% | |
| AGATGAACAAGCAACATGTT+TGG | - | chr7_2:28688541-28688560 | None:intergenic | 35.0% | |
| GTTGCTTGTTCATCTATTGA+TGG | + | chr7_2:28688546-28688565 | Msa1055160:CDS | 35.0% | |
| AAGGAAAATTGGAGGAACAA+AGG | + | chr7_2:28688607-28688626 | Msa1055160:CDS | 35.0% | |
| GGCACTTTCAAAGTTAGTAT+TGG | + | chr7_2:28688628-28688647 | Msa1055160:intron | 35.0% | |
| !! | TCAAAGTTAGTATTGGTGTG+TGG | + | chr7_2:28688635-28688654 | Msa1055160:intron | 35.0% |
| !! | CAAAGTTAGTATTGGTGTGT+GGG | + | chr7_2:28688636-28688655 | Msa1055160:intron | 35.0% |
| AACTGGAGCTTATTGTCTAT+TGG | + | chr7_2:28688676-28688695 | Msa1055160:intron | 35.0% | |
| CCTGATTGAAATCACTAGTA+TGG | - | chr7_2:28688715-28688734 | None:intergenic | 35.0% | |
| CCATACTAGTGATTTCAATC+AGG | + | chr7_2:28688712-28688731 | Msa1055160:intron | 35.0% | |
| !! | TCGCCTTTTCTGAGAATATA+TGG | - | chr7_2:28688813-28688832 | None:intergenic | 35.0% |
| AGGAAAGAACTCTGTGATTA+TGG | - | chr7_2:28688837-28688856 | None:intergenic | 35.0% | |
| TAATCACAGAGTTCTTTCCT+AGG | + | chr7_2:28688837-28688856 | Msa1055160:CDS | 35.0% | |
| AATCACAGAGTTCTTTCCTA+GGG | + | chr7_2:28688838-28688857 | Msa1055160:CDS | 35.0% | |
| !! | TCTTGTGAAGTGTTCTGAAA+AGG | - | chr7_2:28688868-28688887 | None:intergenic | 35.0% |
| ! | ACATGTGTTGATACTTCTAG+AGG | + | chr7_2:28689007-28689026 | Msa1055160:CDS | 35.0% |
| ! | CATGTGTTGATACTTCTAGA+GGG | + | chr7_2:28689008-28689027 | Msa1055160:CDS | 35.0% |
| ! | ATGTGTTGATACTTCTAGAG+GGG | + | chr7_2:28689009-28689028 | Msa1055160:CDS | 35.0% |
| ! | CTTGGATTTCGATTTTCACA+CGG | + | chr7_2:28689061-28689080 | Msa1055160:CDS | 35.0% |
| CTGATAAATCTTTGATGTCG+TGG | - | chr7_2:28687431-28687450 | None:intergenic | 35.0% | |
| AGATTTATCAGATCAGATGG+CGG | + | chr7_2:28687440-28687459 | Msa1055160:CDS | 35.0% | |
| AGAACCAATTCCGGTTATTA+GGG | + | chr7_2:28687515-28687534 | Msa1055160:intron | 35.0% | |
| TTCTGCAAGCATGTCTTAAA+AGG | - | chr7_2:28687722-28687741 | None:intergenic | 35.0% | |
| AATTCTTACGTTGTTGAACG+AGG | + | chr7_2:28687812-28687831 | Msa1055160:intron | 35.0% | |
| !! | GATTCGGTGATTGAATGTTA+CGG | - | chr7_2:28687877-28687896 | None:intergenic | 35.0% |
| CGAATCTGTTGTTAGTATTG+AGG | + | chr7_2:28687891-28687910 | Msa1055160:intron | 35.0% | |
| TGCAAATCCACAGAAAGTTT+GGG | + | chr7_2:28688049-28688068 | Msa1055160:CDS | 35.0% | |
| ATAGACACTAACAACATTCC+GGG | + | chr7_2:28688111-28688130 | Msa1055160:CDS | 35.0% | |
| AGTGAGTCAAATCTAGAGAA+AGG | + | chr7_2:28688183-28688202 | Msa1055160:CDS | 35.0% | |
| ! | TCTGCCCATTCTAGAAAAAA+GGG | + | chr7_2:28688270-28688289 | Msa1055160:CDS | 35.0% |
| !!! | TGTCCCCTTTTTTCTAGAAT+GGG | - | chr7_2:28688277-28688296 | None:intergenic | 35.0% |
| !!! | ATGTCCCCTTTTTTCTAGAA+TGG | - | chr7_2:28688278-28688297 | None:intergenic | 35.0% |
| TCATCTGTAGGCATTAATCA+AGG | + | chr7_2:28688306-28688325 | Msa1055160:CDS | 35.0% | |
| AATCAAGGTTCTATTGAACG+TGG | + | chr7_2:28688321-28688340 | Msa1055160:CDS | 35.0% | |
| TCTATTGAACGTGGTTGTTA+TGG | + | chr7_2:28688330-28688349 | Msa1055160:CDS | 35.0% | |
| CGCTTGATATCAATAACAAG+CGG | - | chr7_2:28688369-28688388 | None:intergenic | 35.0% | |
| AGATGAACAAGCAACATGTT+TGG | - | chr7_2:28688541-28688560 | None:intergenic | 35.0% | |
| GTTGCTTGTTCATCTATTGA+TGG | + | chr7_2:28688546-28688565 | Msa1055160:CDS | 35.0% | |
| AAGGAAAATTGGAGGAACAA+AGG | + | chr7_2:28688607-28688626 | Msa1055160:CDS | 35.0% | |
| GGCACTTTCAAAGTTAGTAT+TGG | + | chr7_2:28688628-28688647 | Msa1055160:intron | 35.0% | |
| !! | TCAAAGTTAGTATTGGTGTG+TGG | + | chr7_2:28688635-28688654 | Msa1055160:intron | 35.0% |
| !! | CAAAGTTAGTATTGGTGTGT+GGG | + | chr7_2:28688636-28688655 | Msa1055160:intron | 35.0% |
| AACTGGAGCTTATTGTCTAT+TGG | + | chr7_2:28688676-28688695 | Msa1055160:intron | 35.0% | |
| CCTGATTGAAATCACTAGTA+TGG | - | chr7_2:28688715-28688734 | None:intergenic | 35.0% | |
| CCATACTAGTGATTTCAATC+AGG | + | chr7_2:28688712-28688731 | Msa1055160:intron | 35.0% | |
| !! | TCGCCTTTTCTGAGAATATA+TGG | - | chr7_2:28688813-28688832 | None:intergenic | 35.0% |
| AGGAAAGAACTCTGTGATTA+TGG | - | chr7_2:28688837-28688856 | None:intergenic | 35.0% | |
| TAATCACAGAGTTCTTTCCT+AGG | + | chr7_2:28688837-28688856 | Msa1055160:CDS | 35.0% | |
| AATCACAGAGTTCTTTCCTA+GGG | + | chr7_2:28688838-28688857 | Msa1055160:CDS | 35.0% | |
| !! | TCTTGTGAAGTGTTCTGAAA+AGG | - | chr7_2:28688868-28688887 | None:intergenic | 35.0% |
| ! | ACATGTGTTGATACTTCTAG+AGG | + | chr7_2:28689007-28689026 | Msa1055160:CDS | 35.0% |
| ! | CATGTGTTGATACTTCTAGA+GGG | + | chr7_2:28689008-28689027 | Msa1055160:CDS | 35.0% |
| ! | ATGTGTTGATACTTCTAGAG+GGG | + | chr7_2:28689009-28689028 | Msa1055160:CDS | 35.0% |
| ! | CTTGGATTTCGATTTTCACA+CGG | + | chr7_2:28689061-28689080 | Msa1055160:CDS | 35.0% |
| AACAGAAACAAACCGAACAG+AGG | + | chr7_2:28687489-28687508 | Msa1055160:CDS | 40.0% | |
| GAGAACCAATTCCGGTTATT+AGG | + | chr7_2:28687514-28687533 | Msa1055160:intron | 40.0% | |
| TGAACCCTAATAACCGGAAT+TGG | - | chr7_2:28687522-28687541 | None:intergenic | 40.0% | |
| ATGTCTTAAAAGGTCGGTCA+AGG | - | chr7_2:28687712-28687731 | None:intergenic | 40.0% | |
| GCAAGCATGTCTTAAAAGGT+CGG | - | chr7_2:28687718-28687737 | None:intergenic | 40.0% | |
| TGATTGAATGTTACGGACGT+CGG | - | chr7_2:28687870-28687889 | None:intergenic | 40.0% | |
| CACATGGTTTCACTTTGTGA+TGG | + | chr7_2:28687925-28687944 | Msa1055160:CDS | 40.0% | |
| ! | CACTTTGTGATGGAGCAAAT+AGG | + | chr7_2:28687935-28687954 | Msa1055160:CDS | 40.0% |
| ! | AGGAACAATAGTGATGATGC+TGG | + | chr7_2:28687997-28688016 | Msa1055160:CDS | 40.0% |
| CTGCAAATCCACAGAAAGTT+TGG | + | chr7_2:28688048-28688067 | Msa1055160:CDS | 40.0% | |
| CATTCTTCCCAAACTTTCTG+TGG | - | chr7_2:28688059-28688078 | None:intergenic | 40.0% | |
| ATATTGCTTCCTTGCAATCC+CGG | - | chr7_2:28688132-28688151 | None:intergenic | 40.0% | |
| TCTAGAGAAAGGTTCTTCCA+TGG | + | chr7_2:28688194-28688213 | Msa1055160:CDS | 40.0% | |
| CTAGAGAAAGGTTCTTCCAT+GGG | + | chr7_2:28688195-28688214 | Msa1055160:CDS | 40.0% | |
| ! | CTCTGCCCATTCTAGAAAAA+AGG | + | chr7_2:28688269-28688288 | Msa1055160:CDS | 40.0% |
| ! | CTGCCCATTCTAGAAAAAAG+GGG | + | chr7_2:28688271-28688290 | Msa1055160:CDS | 40.0% |
| ACATGTGACGTTTCATCTGT+AGG | + | chr7_2:28688294-28688313 | Msa1055160:CDS | 40.0% | |
| CAAGCAACATGTTTGGATGA+GGG | - | chr7_2:28688534-28688553 | None:intergenic | 40.0% | |
| ACAAGCAACATGTTTGGATG+AGG | - | chr7_2:28688535-28688554 | None:intergenic | 40.0% | |
| TTGATGAATCCAGCAGTGTT+CGG | - | chr7_2:28688572-28688591 | None:intergenic | 40.0% | |
| CCAGTTGTCATCTTATGGTA+GGG | - | chr7_2:28688662-28688681 | None:intergenic | 40.0% | |
| TCCAGTTGTCATCTTATGGT+AGG | - | chr7_2:28688663-28688682 | None:intergenic | 40.0% | |
| AAGCTCCAGTTGTCATCTTA+TGG | - | chr7_2:28688667-28688686 | None:intergenic | 40.0% | |
| ATCACAGAGTTCTTTCCTAG+GGG | + | chr7_2:28688839-28688858 | Msa1055160:CDS | 40.0% | |
| !! | CATCAAAAGGCATCTTAGCA+TGG | + | chr7_2:28688904-28688923 | Msa1055160:CDS | 40.0% |
| ATCGAAATCCAAGTATCCCA+CGG | - | chr7_2:28689054-28689073 | None:intergenic | 40.0% | |
| !! | AGTGTCCAGACTTGTTGAAA+CGG | - | chr7_2:28689113-28689132 | None:intergenic | 40.0% |
| TCAACAAGTCTGGACACTAT+TGG | + | chr7_2:28689115-28689134 | Msa1055160:CDS | 40.0% | |
| !! | CACTATTGGTTGGTTTGCAA+AGG | + | chr7_2:28689129-28689148 | Msa1055160:CDS | 40.0% |
| AACAGAAACAAACCGAACAG+AGG | + | chr7_2:28687489-28687508 | Msa1055160:CDS | 40.0% | |
| GAGAACCAATTCCGGTTATT+AGG | + | chr7_2:28687514-28687533 | Msa1055160:intron | 40.0% | |
| TGAACCCTAATAACCGGAAT+TGG | - | chr7_2:28687522-28687541 | None:intergenic | 40.0% | |
| ATGTCTTAAAAGGTCGGTCA+AGG | - | chr7_2:28687712-28687731 | None:intergenic | 40.0% | |
| GCAAGCATGTCTTAAAAGGT+CGG | - | chr7_2:28687718-28687737 | None:intergenic | 40.0% | |
| TGATTGAATGTTACGGACGT+CGG | - | chr7_2:28687870-28687889 | None:intergenic | 40.0% | |
| CACATGGTTTCACTTTGTGA+TGG | + | chr7_2:28687925-28687944 | Msa1055160:CDS | 40.0% | |
| ! | CACTTTGTGATGGAGCAAAT+AGG | + | chr7_2:28687935-28687954 | Msa1055160:CDS | 40.0% |
| ! | AGGAACAATAGTGATGATGC+TGG | + | chr7_2:28687997-28688016 | Msa1055160:CDS | 40.0% |
| CTGCAAATCCACAGAAAGTT+TGG | + | chr7_2:28688048-28688067 | Msa1055160:CDS | 40.0% | |
| CATTCTTCCCAAACTTTCTG+TGG | - | chr7_2:28688059-28688078 | None:intergenic | 40.0% | |
| ATATTGCTTCCTTGCAATCC+CGG | - | chr7_2:28688132-28688151 | None:intergenic | 40.0% | |
| TCTAGAGAAAGGTTCTTCCA+TGG | + | chr7_2:28688194-28688213 | Msa1055160:CDS | 40.0% | |
| CTAGAGAAAGGTTCTTCCAT+GGG | + | chr7_2:28688195-28688214 | Msa1055160:CDS | 40.0% | |
| ! | CTCTGCCCATTCTAGAAAAA+AGG | + | chr7_2:28688269-28688288 | Msa1055160:CDS | 40.0% |
| ! | CTGCCCATTCTAGAAAAAAG+GGG | + | chr7_2:28688271-28688290 | Msa1055160:CDS | 40.0% |
| ACATGTGACGTTTCATCTGT+AGG | + | chr7_2:28688294-28688313 | Msa1055160:CDS | 40.0% | |
| CAAGCAACATGTTTGGATGA+GGG | - | chr7_2:28688534-28688553 | None:intergenic | 40.0% | |
| ACAAGCAACATGTTTGGATG+AGG | - | chr7_2:28688535-28688554 | None:intergenic | 40.0% | |
| TTGATGAATCCAGCAGTGTT+CGG | - | chr7_2:28688572-28688591 | None:intergenic | 40.0% | |
| CCAGTTGTCATCTTATGGTA+GGG | - | chr7_2:28688662-28688681 | None:intergenic | 40.0% | |
| TCCAGTTGTCATCTTATGGT+AGG | - | chr7_2:28688663-28688682 | None:intergenic | 40.0% | |
| AAGCTCCAGTTGTCATCTTA+TGG | - | chr7_2:28688667-28688686 | None:intergenic | 40.0% | |
| ATCACAGAGTTCTTTCCTAG+GGG | + | chr7_2:28688839-28688858 | Msa1055160:CDS | 40.0% | |
| !! | CATCAAAAGGCATCTTAGCA+TGG | + | chr7_2:28688904-28688923 | Msa1055160:CDS | 40.0% |
| ATCGAAATCCAAGTATCCCA+CGG | - | chr7_2:28689054-28689073 | None:intergenic | 40.0% | |
| !! | AGTGTCCAGACTTGTTGAAA+CGG | - | chr7_2:28689113-28689132 | None:intergenic | 40.0% |
| TCAACAAGTCTGGACACTAT+TGG | + | chr7_2:28689115-28689134 | Msa1055160:CDS | 40.0% | |
| !! | CACTATTGGTTGGTTTGCAA+AGG | + | chr7_2:28689129-28689148 | Msa1055160:CDS | 40.0% |
| GGTAAGAGTCATGGTTATGG+CGG | - | chr7_2:28687410-28687429 | None:intergenic | 45.0% | |
| CGTGGTAAGAGTCATGGTTA+TGG | - | chr7_2:28687413-28687432 | None:intergenic | 45.0% | |
| TGATGTCGTGGTAAGAGTCA+TGG | - | chr7_2:28687419-28687438 | None:intergenic | 45.0% | |
| AGAAACAAACCGAACAGAGG+AGG | + | chr7_2:28687492-28687511 | Msa1055160:CDS | 45.0% | |
| ! | ATTGGTTCTCCTCCTCTGTT+CGG | - | chr7_2:28687504-28687523 | None:intergenic | 45.0% |
| AGACATGCTTGCAGAATAGC+AGG | + | chr7_2:28687726-28687745 | Msa1055160:intron | 45.0% | |
| AGCAGGTAACTCACGTAAGA+CGG | + | chr7_2:28687743-28687762 | Msa1055160:intron | 45.0% | |
| ! | AGTGATGATGCTGGTGAAAC+TGG | + | chr7_2:28688006-28688025 | Msa1055160:CDS | 45.0% |
| AACAACATTCCGGGATTGCA+AGG | + | chr7_2:28688120-28688139 | Msa1055160:CDS | 45.0% | |
| ACGTGGTTGTTATGGCACAA+AGG | + | chr7_2:28688338-28688357 | Msa1055160:CDS | 45.0% | |
| CAAGCGAAAAGGTTGTCCAA+TGG | + | chr7_2:28688383-28688402 | Msa1055160:CDS | 45.0% | |
| TTGTCCAATGGTAACCGATC+AGG | + | chr7_2:28688395-28688414 | Msa1055160:CDS | 45.0% | |
| TGTCCAATGGTAACCGATCA+GGG | + | chr7_2:28688396-28688415 | Msa1055160:CDS | 45.0% | |
| AGGTTTGAAAACCCCCTGAT+CGG | - | chr7_2:28688412-28688431 | None:intergenic | 45.0% | |
| GGATCTGATAGATGGCAAGA+AGG | - | chr7_2:28688432-28688451 | None:intergenic | 45.0% | |
| TTGCCATCTATCAGATCCAC+CGG | + | chr7_2:28688434-28688453 | Msa1055160:CDS | 45.0% | |
| TAAACTGCGTGTTGTAGCCA+TGG | - | chr7_2:28688495-28688514 | None:intergenic | 45.0% | |
| CATGTTTGGATGAGGGTGAT+GGG | - | chr7_2:28688527-28688546 | None:intergenic | 45.0% | |
| ACATGTTTGGATGAGGGTGA+TGG | - | chr7_2:28688528-28688547 | None:intergenic | 45.0% | |
| CCCTACCATAAGATGACAAC+TGG | + | chr7_2:28688659-28688678 | Msa1055160:intron | 45.0% | |
| GGTGGTTTATTTGGCAACGA+CGG | - | chr7_2:28688971-28688990 | None:intergenic | 45.0% | |
| GTCGTTGCCAAATAAACCAC+CGG | + | chr7_2:28688970-28688989 | Msa1055160:CDS | 45.0% | |
| CATGTAGTAACACGTCGATC+CGG | - | chr7_2:28688992-28689011 | None:intergenic | 45.0% | |
| !!! | TCACACGGTGCTGTTTTTCA+TGG | + | chr7_2:28689076-28689095 | Msa1055160:CDS | 45.0% |
| !!! | CACACGGTGCTGTTTTTCAT+GGG | + | chr7_2:28689077-28689096 | Msa1055160:CDS | 45.0% |
| !!! | ACACGGTGCTGTTTTTCATG+GGG | + | chr7_2:28689078-28689097 | Msa1055160:CDS | 45.0% |
| CATACCCGTTTCAACAAGTC+TGG | + | chr7_2:28689105-28689124 | Msa1055160:CDS | 45.0% | |
| !! | GTGTCCAGACTTGTTGAAAC+GGG | - | chr7_2:28689112-28689131 | None:intergenic | 45.0% |
| CAAGTCTGGACACTATTGGT+TGG | + | chr7_2:28689119-28689138 | Msa1055160:CDS | 45.0% | |
| CCAACTCTACGCAGTATATC+AGG | - | chr7_2:28689157-28689176 | None:intergenic | 45.0% | |
| CCTGATATACTGCGTAGAGT+TGG | + | chr7_2:28689154-28689173 | Msa1055160:CDS | 45.0% | |
| GGTAAGAGTCATGGTTATGG+CGG | - | chr7_2:28687410-28687429 | None:intergenic | 45.0% | |
| CGTGGTAAGAGTCATGGTTA+TGG | - | chr7_2:28687413-28687432 | None:intergenic | 45.0% | |
| TGATGTCGTGGTAAGAGTCA+TGG | - | chr7_2:28687419-28687438 | None:intergenic | 45.0% | |
| AGAAACAAACCGAACAGAGG+AGG | + | chr7_2:28687492-28687511 | Msa1055160:CDS | 45.0% | |
| ! | ATTGGTTCTCCTCCTCTGTT+CGG | - | chr7_2:28687504-28687523 | None:intergenic | 45.0% |
| AGACATGCTTGCAGAATAGC+AGG | + | chr7_2:28687726-28687745 | Msa1055160:intron | 45.0% | |
| AGCAGGTAACTCACGTAAGA+CGG | + | chr7_2:28687743-28687762 | Msa1055160:intron | 45.0% | |
| ! | AGTGATGATGCTGGTGAAAC+TGG | + | chr7_2:28688006-28688025 | Msa1055160:CDS | 45.0% |
| AACAACATTCCGGGATTGCA+AGG | + | chr7_2:28688120-28688139 | Msa1055160:CDS | 45.0% | |
| ACGTGGTTGTTATGGCACAA+AGG | + | chr7_2:28688338-28688357 | Msa1055160:CDS | 45.0% | |
| CAAGCGAAAAGGTTGTCCAA+TGG | + | chr7_2:28688383-28688402 | Msa1055160:CDS | 45.0% | |
| TTGTCCAATGGTAACCGATC+AGG | + | chr7_2:28688395-28688414 | Msa1055160:CDS | 45.0% | |
| TGTCCAATGGTAACCGATCA+GGG | + | chr7_2:28688396-28688415 | Msa1055160:CDS | 45.0% | |
| AGGTTTGAAAACCCCCTGAT+CGG | - | chr7_2:28688412-28688431 | None:intergenic | 45.0% | |
| GGATCTGATAGATGGCAAGA+AGG | - | chr7_2:28688432-28688451 | None:intergenic | 45.0% | |
| TTGCCATCTATCAGATCCAC+CGG | + | chr7_2:28688434-28688453 | Msa1055160:CDS | 45.0% | |
| TAAACTGCGTGTTGTAGCCA+TGG | - | chr7_2:28688495-28688514 | None:intergenic | 45.0% | |
| CATGTTTGGATGAGGGTGAT+GGG | - | chr7_2:28688527-28688546 | None:intergenic | 45.0% | |
| ACATGTTTGGATGAGGGTGA+TGG | - | chr7_2:28688528-28688547 | None:intergenic | 45.0% | |
| CCCTACCATAAGATGACAAC+TGG | + | chr7_2:28688659-28688678 | Msa1055160:intron | 45.0% | |
| GGTGGTTTATTTGGCAACGA+CGG | - | chr7_2:28688971-28688990 | None:intergenic | 45.0% | |
| GTCGTTGCCAAATAAACCAC+CGG | + | chr7_2:28688970-28688989 | Msa1055160:CDS | 45.0% | |
| CATGTAGTAACACGTCGATC+CGG | - | chr7_2:28688992-28689011 | None:intergenic | 45.0% | |
| !!! | TCACACGGTGCTGTTTTTCA+TGG | + | chr7_2:28689076-28689095 | Msa1055160:CDS | 45.0% |
| !!! | CACACGGTGCTGTTTTTCAT+GGG | + | chr7_2:28689077-28689096 | Msa1055160:CDS | 45.0% |
| !!! | ACACGGTGCTGTTTTTCATG+GGG | + | chr7_2:28689078-28689097 | Msa1055160:CDS | 45.0% |
| CATACCCGTTTCAACAAGTC+TGG | + | chr7_2:28689105-28689124 | Msa1055160:CDS | 45.0% | |
| !! | GTGTCCAGACTTGTTGAAAC+GGG | - | chr7_2:28689112-28689131 | None:intergenic | 45.0% |
| CAAGTCTGGACACTATTGGT+TGG | + | chr7_2:28689119-28689138 | Msa1055160:CDS | 45.0% | |
| CCAACTCTACGCAGTATATC+AGG | - | chr7_2:28689157-28689176 | None:intergenic | 45.0% | |
| CCTGATATACTGCGTAGAGT+TGG | + | chr7_2:28689154-28689173 | Msa1055160:CDS | 45.0% | |
| TGGGAGATCAACTCATGACG+AGG | + | chr7_2:28687374-28687393 | Msa1055160:CDS | 50.0% | |
| GGGAGATCAACTCATGACGA+GGG | + | chr7_2:28687375-28687394 | Msa1055160:CDS | 50.0% | |
| ! | TATCAGATCAGATGGCGGTG+TGG | + | chr7_2:28687445-28687464 | Msa1055160:CDS | 50.0% |
| CAGAGGAGGAGAACCAATTC+CGG | + | chr7_2:28687506-28687525 | Msa1055160:CDS | 50.0% | |
| TGAGGAGACTGATGAGCACA+TGG | + | chr7_2:28687909-28687928 | Msa1055160:CDS | 50.0% | |
| GGTTCTTCCATGGGTAACAG+CGG | + | chr7_2:28688204-28688223 | Msa1055160:CDS | 50.0% | |
| GTCCAATGGTAACCGATCAG+GGG | + | chr7_2:28688397-28688416 | Msa1055160:CDS | 50.0% | |
| TCCAATGGTAACCGATCAGG+GGG | + | chr7_2:28688398-28688417 | Msa1055160:CDS | 50.0% | |
| AGTCCGGTGGATCTGATAGA+TGG | - | chr7_2:28688440-28688459 | None:intergenic | 50.0% | |
| !! | ATGAGGGTGATGGGTGTTCT+AGG | - | chr7_2:28688518-28688537 | None:intergenic | 50.0% |
| ! | TATTGATGGCCGAACACTGC+TGG | + | chr7_2:28688560-28688579 | Msa1055160:CDS | 50.0% |
| !! | GTTCTGAAAAGGCTTCCCCT+AGG | - | chr7_2:28688857-28688876 | None:intergenic | 50.0% |
| GGTTTATTTGGCAACGACGG+TGG | - | chr7_2:28688968-28688987 | None:intergenic | 50.0% | |
| CGTCGATCCGGTGGTTTATT+TGG | - | chr7_2:28688980-28688999 | None:intergenic | 50.0% | |
| !!! | CACGGTGCTGTTTTTCATGG+GGG | + | chr7_2:28689079-28689098 | Msa1055160:CDS | 50.0% |
| TGGGAGATCAACTCATGACG+AGG | + | chr7_2:28687374-28687393 | Msa1055160:CDS | 50.0% | |
| GGGAGATCAACTCATGACGA+GGG | + | chr7_2:28687375-28687394 | Msa1055160:CDS | 50.0% | |
| ! | TATCAGATCAGATGGCGGTG+TGG | + | chr7_2:28687445-28687464 | Msa1055160:CDS | 50.0% |
| CAGAGGAGGAGAACCAATTC+CGG | + | chr7_2:28687506-28687525 | Msa1055160:CDS | 50.0% | |
| TGAGGAGACTGATGAGCACA+TGG | + | chr7_2:28687909-28687928 | Msa1055160:CDS | 50.0% | |
| GGTTCTTCCATGGGTAACAG+CGG | + | chr7_2:28688204-28688223 | Msa1055160:CDS | 50.0% | |
| GTCCAATGGTAACCGATCAG+GGG | + | chr7_2:28688397-28688416 | Msa1055160:CDS | 50.0% | |
| TCCAATGGTAACCGATCAGG+GGG | + | chr7_2:28688398-28688417 | Msa1055160:CDS | 50.0% | |
| AGTCCGGTGGATCTGATAGA+TGG | - | chr7_2:28688440-28688459 | None:intergenic | 50.0% | |
| !! | ATGAGGGTGATGGGTGTTCT+AGG | - | chr7_2:28688518-28688537 | None:intergenic | 50.0% |
| ! | TATTGATGGCCGAACACTGC+TGG | + | chr7_2:28688560-28688579 | Msa1055160:CDS | 50.0% |
| !! | GTTCTGAAAAGGCTTCCCCT+AGG | - | chr7_2:28688857-28688876 | None:intergenic | 50.0% |
| GGTTTATTTGGCAACGACGG+TGG | - | chr7_2:28688968-28688987 | None:intergenic | 50.0% | |
| CGTCGATCCGGTGGTTTATT+TGG | - | chr7_2:28688980-28688999 | None:intergenic | 50.0% | |
| !!! | CACGGTGCTGTTTTTCATGG+GGG | + | chr7_2:28689079-28689098 | Msa1055160:CDS | 50.0% |
| AACACTGCCGCTGTTACCCA+TGG | - | chr7_2:28688214-28688233 | None:intergenic | 55.0% | |
| ACCCCCTGATCGGTTACCAT+TGG | - | chr7_2:28688402-28688421 | None:intergenic | 55.0% | |
| TGTAGCCATGGTAGCCTGAG+CGG | - | chr7_2:28688483-28688502 | None:intergenic | 55.0% | |
| ATGGCTCTCGACGTTGCCAA+AGG | + | chr7_2:28688923-28688942 | Msa1055160:CDS | 55.0% | |
| GTAGTAACACGTCGATCCGG+TGG | - | chr7_2:28688989-28689008 | None:intergenic | 55.0% | |
| AGTATCCCACGGAATCCAGC+AGG | - | chr7_2:28689043-28689062 | None:intergenic | 55.0% | |
| GCTGGATTCCGTGGGATACT+TGG | + | chr7_2:28689043-28689062 | Msa1055160:CDS | 55.0% | |
| AACACTGCCGCTGTTACCCA+TGG | - | chr7_2:28688214-28688233 | None:intergenic | 55.0% | |
| ACCCCCTGATCGGTTACCAT+TGG | - | chr7_2:28688402-28688421 | None:intergenic | 55.0% | |
| TGTAGCCATGGTAGCCTGAG+CGG | - | chr7_2:28688483-28688502 | None:intergenic | 55.0% | |
| ATGGCTCTCGACGTTGCCAA+AGG | + | chr7_2:28688923-28688942 | Msa1055160:CDS | 55.0% | |
| GTAGTAACACGTCGATCCGG+TGG | - | chr7_2:28688989-28689008 | None:intergenic | 55.0% | |
| AGTATCCCACGGAATCCAGC+AGG | - | chr7_2:28689043-28689062 | None:intergenic | 55.0% | |
| GCTGGATTCCGTGGGATACT+TGG | + | chr7_2:28689043-28689062 | Msa1055160:CDS | 55.0% | |
| ! | GATGGCGGTGTGGACAGCTA+AGG | + | chr7_2:28687455-28687474 | Msa1055160:CDS | 60.0% |
| AGAGAGGGAACGAAGTCCGG+TGG | - | chr7_2:28688453-28688472 | None:intergenic | 60.0% | |
| GGCAGAGAGGGAACGAAGTC+CGG | - | chr7_2:28688456-28688475 | None:intergenic | 60.0% | |
| ! | AGAGTGCCTGCTGGATTCCG+TGG | + | chr7_2:28689034-28689053 | Msa1055160:CDS | 60.0% |
| GAGTGCCTGCTGGATTCCGT+GGG | + | chr7_2:28689035-28689054 | Msa1055160:CDS | 60.0% | |
| ! | GATGGCGGTGTGGACAGCTA+AGG | + | chr7_2:28687455-28687474 | Msa1055160:CDS | 60.0% |
| AGAGAGGGAACGAAGTCCGG+TGG | - | chr7_2:28688453-28688472 | None:intergenic | 60.0% | |
| GGCAGAGAGGGAACGAAGTC+CGG | - | chr7_2:28688456-28688475 | None:intergenic | 60.0% | |
| ! | AGAGTGCCTGCTGGATTCCG+TGG | + | chr7_2:28689034-28689053 | Msa1055160:CDS | 60.0% |
| GAGTGCCTGCTGGATTCCGT+GGG | + | chr7_2:28689035-28689054 | Msa1055160:CDS | 60.0% | |
| CATGGTAGCCTGAGCGGTGG+GGG | - | chr7_2:28688477-28688496 | None:intergenic | 65.0% | |
| CCATGGTAGCCTGAGCGGTG+GGG | - | chr7_2:28688478-28688497 | None:intergenic | 65.0% | |
| GCCATGGTAGCCTGAGCGGT+GGG | - | chr7_2:28688479-28688498 | None:intergenic | 65.0% | |
| AGCCATGGTAGCCTGAGCGG+TGG | - | chr7_2:28688480-28688499 | None:intergenic | 65.0% | |
| !! | AGAGGGGTGAGAGTGCCTGC+TGG | + | chr7_2:28689025-28689044 | Msa1055160:CDS | 65.0% |
| CATGGTAGCCTGAGCGGTGG+GGG | - | chr7_2:28688477-28688496 | None:intergenic | 65.0% | |
| CCATGGTAGCCTGAGCGGTG+GGG | - | chr7_2:28688478-28688497 | None:intergenic | 65.0% | |
| GCCATGGTAGCCTGAGCGGT+GGG | - | chr7_2:28688479-28688498 | None:intergenic | 65.0% | |
| AGCCATGGTAGCCTGAGCGG+TGG | - | chr7_2:28688480-28688499 | None:intergenic | 65.0% | |
| !! | AGAGGGGTGAGAGTGCCTGC+TGG | + | chr7_2:28689025-28689044 | Msa1055160:CDS | 65.0% |
| CTGAGCGGTGGGGGCAGAGA+GGG | - | chr7_2:28688468-28688487 | None:intergenic | 70.0% | |
| CCCCACCGCTCAGGCTACCA+TGG | + | chr7_2:28688475-28688494 | Msa1055160:CDS | 70.0% | |
| CTGAGCGGTGGGGGCAGAGA+GGG | - | chr7_2:28688468-28688487 | None:intergenic | 70.0% | |
| CCCCACCGCTCAGGCTACCA+TGG | + | chr7_2:28688475-28688494 | Msa1055160:CDS | 70.0% | |
| CCTGAGCGGTGGGGGCAGAG+AGG | - | chr7_2:28688469-28688488 | None:intergenic | 75.0% | |
| CCTCTCTGCCCCCACCGCTC+AGG | + | chr7_2:28688466-28688485 | Msa1055160:CDS | 75.0% | |
| CCTGAGCGGTGGGGGCAGAG+AGG | - | chr7_2:28688469-28688488 | None:intergenic | 75.0% | |
| CCTCTCTGCCCCCACCGCTC+AGG | + | chr7_2:28688466-28688485 | Msa1055160:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 28687373 | 28689207 | 28687373 | ID=Msa1055160;Name=Msa1055160 |
| chr7_2 | mRNA | 28687373 | 28689207 | 28687373 | ID=Msa1055160-mRNA-1;Parent=Msa1055160;Name=Msa1055160-mRNA-1;_AED=0.73;_eAED=0.73;_QI=0|0|0|0.66|1|1|3|0|429 |
| chr7_2 | exon | 28687373 | 28687527 | 28687373 | ID=Msa1055160-mRNA-1:exon:5953;Parent=Msa1055160-mRNA-1 |
| chr7_2 | exon | 28687906 | 28688639 | 28687906 | ID=Msa1055160-mRNA-1:exon:5954;Parent=Msa1055160-mRNA-1 |
| chr7_2 | exon | 28688807 | 28689207 | 28688807 | ID=Msa1055160-mRNA-1:exon:5955;Parent=Msa1055160-mRNA-1 |
| chr7_2 | CDS | 28687373 | 28687527 | 28687373 | ID=Msa1055160-mRNA-1:cds;Parent=Msa1055160-mRNA-1 |
| chr7_2 | CDS | 28687906 | 28688639 | 28687906 | ID=Msa1055160-mRNA-1:cds;Parent=Msa1055160-mRNA-1 |
| chr7_2 | CDS | 28688807 | 28689207 | 28688807 | ID=Msa1055160-mRNA-1:cds;Parent=Msa1055160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
