AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1056650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1056650 MtrunA17_Chr7g0228231 98.558 208 3 0 1 208 1 208 3.42e-153 422
Msa1056650 MtrunA17_Chr6g0450101 74.312 218 37 6 1 208 1 209 5.65e-106 303
Msa1056650 MtrunA17_Chr1g0209661 75.630 119 28 1 3 120 15 133 2.02e-65 204
Msa1056650 MtrunA17_Chr1g0194291 64.662 133 47 0 1 133 8 140 1.47e-60 190
Msa1056650 MtrunA17_Chr2g0293911 76.000 125 30 0 8 132 18 142 9.95e-60 190
Msa1056650 MtrunA17_Chr4g0068921 73.810 126 33 0 7 132 17 142 1.48e-58 182
Msa1056650 MtrunA17_Chr1g0194301 68.067 119 38 0 14 132 33 151 2.18e-58 185
Msa1056650 MtrunA17_Chr1g0186061 67.619 105 34 0 15 119 21 125 7.41e-50 162
Msa1056650 MtrunA17_Chr1g0168661 54.422 147 44 2 15 138 22 168 3.31e-48 158
Msa1056650 MtrunA17_Chr7g0275911 60.656 122 46 1 1 122 1 120 1.23e-46 154
Msa1056650 MtrunA17_Chr5g0410961 66.667 105 35 0 14 118 12 116 3.73e-46 155
Msa1056650 MtrunA17_Chr4g0068061 66.667 105 35 0 14 118 12 116 4.15e-46 155
Msa1056650 MtrunA17_Chr4g0032401 45.455 187 87 4 14 193 17 195 4.80e-46 155
Msa1056650 MtrunA17_Chr2g0327821 55.462 119 47 1 13 131 5 117 8.17e-46 151
Msa1056650 MtrunA17_Chr2g0330041 59.483 116 45 1 1 116 1 114 1.25e-45 155
Msa1056650 MtrunA17_Chr8g0346561 58.400 125 46 1 14 138 12 130 1.52e-45 152
Msa1056650 MtrunA17_Chr4g0039971 63.551 107 39 0 14 120 13 119 2.02e-45 154
Msa1056650 MtrunA17_Chr8g0387421 43.216 199 98 4 1 190 1 193 2.35e-45 152
Msa1056650 MtrunA17_Chr2g0323411 62.963 108 40 0 14 121 12 119 3.94e-45 152
Msa1056650 MtrunA17_Chr1g0187761 53.030 132 62 0 14 145 12 143 5.33e-45 150
Msa1056650 MtrunA17_Chr3g0099131 42.857 182 95 1 13 185 40 221 8.68e-45 155
Msa1056650 MtrunA17_Chr8g0385321 61.017 118 44 1 1 118 1 116 9.03e-45 151
Msa1056650 MtrunA17_Chr1g0167661 50.704 142 64 1 14 149 12 153 1.22e-44 149
Msa1056650 MtrunA17_Chr1g0203411 56.198 121 51 1 1 121 1 119 1.47e-44 150
Msa1056650 MtrunA17_Chr4g0037141 48.734 158 70 1 16 162 14 171 2.17e-44 149
Msa1056650 MtrunA17_Chr3g0131121 49.383 162 76 2 1 162 1 156 2.45e-44 149
Msa1056650 MtrunA17_Chr4g0070641 48.447 161 69 2 1 161 1 147 2.90e-44 145
Msa1056650 MtrunA17_Chr5g0395281 58.407 113 47 0 8 120 6 118 3.95e-44 149
Msa1056650 MtrunA17_Chr1g0180391 60.748 107 42 0 13 119 18 124 4.27e-44 147
Msa1056650 MtrunA17_Chr4g0070611 58.824 119 47 1 1 119 1 117 4.55e-44 149
Msa1056650 MtrunA17_Chr8g0349261 63.208 106 38 1 14 118 13 118 9.26e-44 148
Msa1056650 MtrunA17_Chr1g0193371 57.025 121 50 1 1 121 1 119 9.31e-44 150
Msa1056650 MtrunA17_Chr2g0281071 62.857 105 39 0 14 118 13 117 1.35e-43 149
Msa1056650 MtrunA17_Chr4g0030881 57.522 113 41 1 15 120 8 120 1.52e-43 146
Msa1056650 MtrunA17_Chr1g0193801 42.708 192 89 3 1 173 1 190 1.72e-43 149
Msa1056650 MtrunA17_Chr1g0167691 60.952 105 41 0 14 118 12 116 2.31e-43 145
Msa1056650 MtrunA17_Chr8g0354661 62.136 103 39 0 14 116 37 139 2.34e-43 152
Msa1056650 MtrunA17_Chr7g0228891 61.321 106 41 0 14 119 12 117 3.16e-43 145
Msa1056650 MtrunA17_Chr7g0274581 56.881 109 47 0 14 122 12 120 3.70e-43 144
Msa1056650 MtrunA17_Chr3g0110351 60.748 107 42 0 14 120 12 118 4.70e-43 146
Msa1056650 MtrunA17_Chr5g0397231 59.821 112 43 1 1 112 1 110 5.61e-43 147
Msa1056650 MtrunA17_Chr7g0261281 61.682 107 41 0 14 120 12 118 5.98e-43 145
Msa1056650 MtrunA17_Chr5g0434571 60.748 107 42 0 14 120 48 154 6.51e-43 147
Msa1056650 MtrunA17_Chr4g0057031 61.905 105 40 0 14 118 12 116 1.11e-42 144
Msa1056650 MtrunA17_Chr8g0342541 55.932 118 50 1 1 118 1 116 1.43e-42 146
Msa1056650 MtrunA17_Chr4g0022901 48.684 152 76 1 7 158 6 155 1.50e-42 144
Msa1056650 MtrunA17_Chr3g0080861 55.556 108 48 0 14 121 37 144 1.76e-42 149
Msa1056650 MtrunA17_Chr4g0048511 61.905 105 40 0 14 118 13 117 1.91e-42 146
Msa1056650 MtrunA17_Chr7g0270891 39.906 213 93 5 1 193 1 198 2.33e-42 146
Msa1056650 MtrunA17_Chr2g0328771 55.752 113 50 0 14 126 20 132 2.35e-42 145
Msa1056650 MtrunA17_Chr4g0022931 53.906 128 58 1 14 140 13 140 2.69e-42 143
Msa1056650 MtrunA17_Chr3g0121241 60.952 105 41 0 14 118 42 146 3.11e-42 144
Msa1056650 MtrunA17_Chr3g0115821 58.879 107 44 0 14 120 12 118 3.20e-42 145
Msa1056650 MtrunA17_Chr5g0435101 56.034 116 49 1 3 118 2 115 3.35e-42 141
Msa1056650 MtrunA17_Chr1g0203441 54.237 118 54 0 12 129 11 128 4.22e-42 143
Msa1056650 MtrunA17_Chr7g0217741 59.813 107 43 0 14 120 12 118 4.98e-42 144
Msa1056650 MtrunA17_Chr8g0342521 55.932 118 50 1 1 118 1 116 7.19e-42 144
Msa1056650 MtrunA17_Chr4g0044421 56.780 118 49 1 1 118 1 116 1.22e-41 139
Msa1056650 MtrunA17_Chr2g0309911 56.637 113 47 1 6 118 5 115 1.23e-41 143
Msa1056650 MtrunA17_Chr4g0022911 48.026 152 72 1 14 158 13 164 1.54e-41 142
Msa1056650 MtrunA17_Chr1g0151941 44.516 155 75 2 14 167 12 156 2.41e-41 140
Msa1056650 MtrunA17_Chr8g0343831 59.259 108 44 0 13 120 7 114 2.43e-41 140
Msa1056650 MtrunA17_Chr1g0154031 52.381 126 60 0 14 139 76 201 3.76e-41 144
Msa1056650 MtrunA17_Chr1g0194951 47.059 153 54 1 14 166 12 137 3.81e-41 143
Msa1056650 MtrunA17_Chr7g0217221 53.043 115 54 0 14 128 12 126 5.83e-41 140
Msa1056650 MtrunA17_Chr6g0453471 58.879 107 44 0 14 120 12 118 5.95e-41 142
Msa1056650 MtrunA17_Chr4g0058631 42.604 169 94 2 1 168 1 167 6.95e-41 142
Msa1056650 MtrunA17_Chr3g0088461 56.604 106 46 0 14 119 22 127 7.69e-41 141
Msa1056650 MtrunA17_Chr2g0323351 47.552 143 73 1 14 156 12 152 8.78e-41 139
Msa1056650 MtrunA17_Chr1g0211161 55.172 116 50 1 3 118 4 117 1.52e-40 137
Msa1056650 MtrunA17_Chr6g0452271 57.547 106 45 0 13 118 11 116 1.53e-40 140
Msa1056650 MtrunA17_Chr3g0092401 57.009 107 46 0 14 120 13 119 1.73e-40 140
Msa1056650 MtrunA17_Chr3g0117091 54.167 120 53 1 1 120 1 118 1.84e-40 140
Msa1056650 MtrunA17_Chr7g0271241 60.000 110 42 1 1 110 1 108 2.22e-40 141
Msa1056650 MtrunA17_Chr8g0342481 52.846 123 57 1 14 135 12 134 5.50e-40 140
Msa1056650 MtrunA17_Chr7g0254411 55.140 107 48 0 14 120 12 118 6.50e-40 139
Msa1056650 MtrunA17_Chr6g0453211 56.522 115 50 0 14 128 12 126 6.64e-40 138
Msa1056650 MtrunA17_Chr4g0042671 58.879 107 44 0 14 120 12 118 7.60e-40 140
Msa1056650 MtrunA17_Chr4g0060721 52.101 119 55 1 14 132 13 129 1.15e-39 138
Msa1056650 MtrunA17_Chr4g0022881 54.783 115 52 0 14 128 12 126 1.45e-39 135
Msa1056650 MtrunA17_Chr2g0311221 58.879 107 41 1 6 112 9 112 3.06e-39 137
Msa1056650 MtrunA17_Chr4g0055981 48.718 156 70 4 14 159 55 210 8.15e-39 133
Msa1056650 MtrunA17_Chr2g0322521 57.018 114 45 1 7 116 18 131 6.34e-38 135
Msa1056650 MtrunA17_Chr7g0269831 61.905 105 40 0 14 118 12 116 9.14e-38 134
Msa1056650 MtrunA17_Chr7g0240821 36.771 223 108 4 18 207 5 227 1.20e-37 130
Msa1056650 MtrunA17_Chr6g0470971 50.833 120 59 0 10 129 10 129 1.30e-37 132
Msa1056650 MtrunA17_Chr1g0152011 46.207 145 73 2 13 152 11 155 2.49e-37 132
Msa1056650 MtrunA17_Chr3g0135311 40.984 183 104 3 13 193 11 191 3.22e-37 132
Msa1056650 MtrunA17_Chr4g0022891 56.863 102 44 0 14 115 12 113 4.40e-37 129
Msa1056650 MtrunA17_Chr3g0103281 53.774 106 49 0 13 118 11 116 1.02e-36 130
Msa1056650 MtrunA17_Chr4g0028311 56.604 106 45 1 14 118 12 117 2.26e-36 129
Msa1056650 MtrunA17_Chr1g0192411 53.774 106 49 0 14 119 12 117 5.65e-36 130
Msa1056650 MtrunA17_Chr2g0327351 59.406 101 40 1 13 112 11 111 6.39e-36 128
Msa1056650 MtrunA17_Chr5g0417821 54.545 110 50 0 9 118 2 111 7.99e-36 127
Msa1056650 MtrunA17_Chr5g0400821 50.847 118 57 1 13 129 11 128 9.58e-36 127
Msa1056650 MtrunA17_Chr7g0264641 52.212 113 53 1 13 124 11 123 7.46e-35 124
Msa1056650 MtrunA17_Chr5g0441131 49.123 114 57 1 7 119 2 115 8.00e-35 122
Msa1056650 MtrunA17_Chr5g0440781 51.429 105 50 1 13 116 11 115 1.47e-34 121
Msa1056650 MtrunA17_Chr4g0054391 43.784 185 86 7 13 193 11 181 4.75e-34 122
Msa1056650 MtrunA17_Chr5g0440761 51.429 105 50 1 13 116 11 115 6.50e-34 121
Msa1056650 MtrunA17_Chr5g0441141 51.429 105 50 1 13 116 11 115 7.64e-34 122
Msa1056650 MtrunA17_Chr8g0334881 51.485 101 48 1 14 113 10 110 8.39e-34 122
Msa1056650 MtrunA17_Chr4g0072751 57.426 101 42 1 13 112 11 111 1.78e-33 122
Msa1056650 MtrunA17_Chr4g0013361 34.706 170 94 4 14 175 10 170 7.39e-33 119
Msa1056650 MtrunA17_Chr5g0434931 51.429 105 51 0 14 118 35 139 2.64e-32 118
Msa1056650 MtrunA17_Chr8g0360111 54.455 101 46 0 14 114 25 125 2.69e-32 117
Msa1056650 MtrunA17_Chr6g0487491 49.180 122 53 2 14 126 12 133 2.69e-32 117
Msa1056650 MtrunA17_Chr7g0247131 66.216 74 25 0 46 119 10 83 4.65e-32 117
Msa1056650 MtrunA17_Chr3g0099141 52.941 85 40 0 11 95 37 121 8.34e-32 112
Msa1056650 MtrunA17_Chr5g0434911 51.429 105 51 0 14 118 21 125 8.74e-32 116
Msa1056650 MtrunA17_Chr5g0434831 51.429 105 51 0 14 118 7 111 9.01e-32 114
Msa1056650 MtrunA17_Chr7g0228991 51.429 105 51 0 14 118 29 133 3.43e-31 115
Msa1056650 MtrunA17_Chr7g0220341 46.154 117 61 1 14 128 25 141 8.44e-31 114
Msa1056650 MtrunA17_Chr5g0434841 50.476 105 52 0 14 118 20 124 2.61e-30 113
Msa1056650 MtrunA17_Chr2g0294811 57.831 83 35 0 8 90 6 88 6.98e-29 104
Msa1056650 MtrunA17_Chr6g0454921 50.495 101 49 1 10 110 9 108 1.44e-27 103
Msa1056650 MtrunA17_Chr8g0342531 51.648 91 42 1 1 91 1 89 4.22e-27 101
Msa1056650 MtrunA17_Chr2g0323321 58.025 81 34 0 14 94 11 91 4.96e-27 99.8
Msa1056650 MtrunA17_Chr8g0342511 51.685 89 41 1 1 89 1 87 9.12e-27 98.6
Msa1056650 MtrunA17_Chr7g0238631 33.333 171 95 2 11 163 108 277 1.03e-26 106
Msa1056650 MtrunA17_Chr7g0238631 37.736 106 64 2 16 120 61 165 9.93e-13 66.2
Msa1056650 MtrunA17_Chr4g0042611 58.442 77 32 0 14 90 12 88 1.23e-26 97.8
Msa1056650 MtrunA17_Chr5g0425591 50.000 90 44 1 7 95 2 91 1.52e-26 97.8
Msa1056650 MtrunA17_Chr4g0053431 34.197 193 111 4 16 204 5 185 2.16e-26 102
Msa1056650 MtrunA17_Chr4g0008551 47.525 101 52 1 16 116 38 137 3.14e-26 103
Msa1056650 MtrunA17_Chr5g0401731 48.515 101 51 1 16 116 15 114 3.31e-26 102
Msa1056650 MtrunA17_Chr8g0342461 51.087 92 42 2 1 91 1 90 1.48e-25 96.7
Msa1056650 MtrunA17_Chr5g0395221 54.545 77 35 0 14 90 12 88 1.56e-25 95.1
Msa1056650 MtrunA17_Chr3g0139671 37.410 139 84 2 11 149 80 215 3.48e-25 102
Msa1056650 MtrunA17_Chr3g0139671 33.333 114 74 2 16 128 33 145 1.78e-11 62.8
Msa1056650 MtrunA17_Chr3g0133601 45.545 101 54 1 16 116 37 136 3.75e-25 97.8
Msa1056650 MtrunA17_Chr8g0342471 51.087 92 42 2 1 91 1 90 3.97e-25 95.5
Msa1056650 MtrunA17_Chr5g0429661 41.964 112 64 1 16 127 122 232 6.79e-25 99.8
Msa1056650 MtrunA17_Chr1g0157731 40.741 108 63 1 11 118 86 192 7.19e-25 101
Msa1056650 MtrunA17_Chr1g0157731 33.333 114 74 2 16 128 39 151 2.03e-11 62.8
Msa1056650 MtrunA17_Chr6g0460661 45.263 95 51 1 16 110 16 109 4.98e-24 93.2
Msa1056650 MtrunA17_Chr3g0117511 37.815 119 73 1 16 134 183 300 9.33e-24 97.8
Msa1056650 MtrunA17_Chr4g0058991 46.939 98 49 2 14 110 207 302 3.94e-23 95.9
Msa1056650 MtrunA17_Chr6g0480581 33.533 167 102 3 16 179 4 164 1.82e-22 91.3
Msa1056650 MtrunA17_Chr7g0228531 39.344 122 72 2 10 131 214 333 4.80e-22 92.8
Msa1056650 MtrunA17_Chr6g0453751 48.352 91 38 2 14 95 20 110 6.32e-22 87.0
Msa1056650 MtrunA17_Chr5g0437321 42.857 105 59 1 10 114 13 116 7.15e-22 90.5
Msa1056650 MtrunA17_Chr5g0417621 37.190 121 75 1 4 124 122 241 2.39e-21 90.9
Msa1056650 MtrunA17_Chr7g0238651 38.889 108 64 1 19 124 10 117 8.12e-21 88.6
Msa1056650 MtrunA17_Chr7g0229101 55.714 70 31 0 46 115 4 73 8.68e-21 86.3
Msa1056650 MtrunA17_Chr3g0093811 35.036 137 76 1 46 169 14 150 2.33e-20 86.3
Msa1056650 MtrunA17_Chr5g0416341 43.564 101 56 1 19 119 29 128 3.59e-20 87.8
Msa1056650 MtrunA17_Chr8g0362231 42.202 109 62 1 19 127 25 132 3.72e-20 87.4
Msa1056650 MtrunA17_Chr7g0229131 42.553 94 52 1 46 137 4 97 4.61e-20 83.2
Msa1056650 MtrunA17_Chr5g0397841 43.878 98 54 1 13 110 107 203 6.30e-20 87.0
Msa1056650 MtrunA17_Chr5g0397841 33.333 117 75 2 15 128 54 170 4.37e-12 64.3
Msa1056650 MtrunA17_Chr6g0460671 30.357 168 109 2 16 183 99 258 6.41e-20 86.3
Msa1056650 MtrunA17_Chr4g0042501 35.897 117 74 1 4 120 93 208 7.17e-20 86.7
Msa1056650 MtrunA17_Chr7g0254261 30.601 183 112 5 16 188 89 266 8.03e-20 85.9
Msa1056650 MtrunA17_Chr5g0434901 55.882 68 30 0 48 115 7 74 1.24e-19 80.5
Msa1056650 MtrunA17_Chr7g0228401 44.318 88 48 1 25 112 288 374 1.19e-18 83.6
Msa1056650 MtrunA17_Chr3g0125801 37.600 125 75 2 1 125 1 122 1.22e-18 82.0
Msa1056650 MtrunA17_Chr1g0177901 45.349 86 46 1 25 110 3 87 1.31e-18 80.5
Msa1056650 MtrunA17_Chr7g0233061 39.516 124 64 4 16 134 180 297 3.16e-18 81.6
Msa1056650 MtrunA17_Chr7g0228481 40.594 101 58 2 10 110 214 312 1.72e-17 80.1
Msa1056650 MtrunA17_Chr1g0193901 45.055 91 48 2 7 95 4 94 2.03e-15 69.3
Msa1056650 MtrunA17_Chr1g0193891 45.055 91 48 2 7 95 4 94 2.03e-15 69.3
Msa1056650 MtrunA17_Chr1g0193871 45.055 91 48 2 7 95 4 94 2.03e-15 69.3
Msa1056650 MtrunA17_Chr1g0193881 45.055 91 48 2 7 95 4 94 2.03e-15 69.3
Msa1056650 MtrunA17_Chr6g0483051 31.579 114 76 2 9 122 62 173 7.28e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1056650 AT3G27810.1 59.242 211 72 3 11 208 17 226 3.06e-82 244
Msa1056650 AT5G40350.1 59.908 217 75 6 1 208 1 214 6.53e-80 238
Msa1056650 AT3G01530.1 58.291 199 66 4 10 208 21 202 3.96e-75 225
Msa1056650 AT1G68320.1 75.455 110 27 0 11 120 16 125 2.46e-61 193
Msa1056650 AT1G25340.1 70.588 119 34 1 3 120 6 124 4.27e-61 192
Msa1056650 AT1G48000.1 68.333 120 38 0 13 132 31 150 4.81e-60 188
Msa1056650 AT2G47190.1 73.874 111 29 0 10 120 16 126 1.79e-59 188
Msa1056650 AT5G49620.1 76.423 123 29 0 10 132 22 144 3.85e-58 186
Msa1056650 AT3G27810.2 53.143 175 68 3 47 208 4 177 6.44e-56 176
Msa1056650 AT1G25340.2 67.227 119 33 2 3 120 6 119 1.30e-55 178
Msa1056650 AT1G25340.3 67.227 119 33 2 3 120 6 119 2.73e-55 178
Msa1056650 AT3G06490.1 73.333 120 32 0 13 132 18 137 2.80e-55 179
Msa1056650 AT5G49620.2 68.613 137 29 1 10 132 22 158 1.79e-54 176
Msa1056650 AT3G24310.1 67.826 115 37 0 15 129 19 133 6.10e-54 174
Msa1056650 AT4G13480.1 68.142 113 36 0 15 127 7 119 1.04e-52 170
Msa1056650 AT5G40350.2 54.762 168 67 5 47 208 5 169 4.88e-52 165
Msa1056650 AT3G30210.1 64.486 107 38 0 15 121 28 134 7.20e-50 163
Msa1056650 AT5G59780.3 58.772 114 47 0 13 126 7 120 4.96e-48 157
Msa1056650 AT3G46130.1 59.292 113 46 0 10 122 5 117 1.38e-47 157
Msa1056650 AT5G14750.1 49.091 165 75 3 3 163 2 161 4.63e-46 151
Msa1056650 AT1G16490.1 46.784 171 83 2 14 181 14 179 8.47e-46 153
Msa1056650 AT3G02940.2 65.421 107 37 0 14 120 12 118 1.04e-45 154
Msa1056650 AT3G02940.1 65.421 107 37 0 14 120 12 118 1.53e-45 153
Msa1056650 AT3G02940.3 65.421 107 37 0 14 120 12 118 1.53e-45 153
Msa1056650 AT3G13890.2 57.627 118 48 1 1 118 1 116 2.44e-45 154
Msa1056650 AT1G22640.1 43.939 198 90 5 16 207 14 196 2.71e-45 151
Msa1056650 AT1G09540.1 59.167 120 47 1 1 120 1 118 4.22e-45 154
Msa1056650 AT2G47460.1 64.762 105 37 0 14 118 12 116 4.23e-45 154
Msa1056650 AT1G63910.1 54.962 131 57 1 1 131 1 129 6.91e-45 153
Msa1056650 AT5G35550.1 49.007 151 73 1 1 151 1 147 1.07e-44 149
Msa1056650 AT1G06180.1 59.130 115 47 0 14 128 12 126 1.18e-44 149
Msa1056650 AT5G40330.1 52.000 125 60 0 10 134 8 132 1.25e-44 148
Msa1056650 AT4G09460.1 66.019 103 35 0 16 118 14 116 1.37e-44 149
Msa1056650 AT1G57560.1 49.677 155 71 2 1 150 1 153 1.91e-44 150
Msa1056650 AT4G38620.1 44.865 185 86 3 16 184 14 198 2.66e-44 149
Msa1056650 AT1G35515.1 65.049 103 36 0 16 118 14 116 3.81e-44 147
Msa1056650 AT1G57560.2 59.322 118 46 1 1 118 1 116 5.03e-44 148
Msa1056650 AT2G31180.1 47.500 160 83 1 14 172 12 171 5.27e-44 147
Msa1056650 AT5G16770.4 62.617 107 40 0 14 120 12 118 5.78e-44 149
Msa1056650 AT5G16770.3 62.617 107 40 0 14 120 12 118 5.78e-44 149
Msa1056650 AT4G34990.1 66.019 103 35 0 16 118 14 116 8.77e-44 147
Msa1056650 AT5G16770.1 62.617 107 40 0 14 120 12 118 9.52e-44 149
Msa1056650 AT5G16770.2 62.617 107 40 0 14 120 12 118 9.52e-44 149
Msa1056650 AT5G54230.1 63.810 105 38 0 14 118 12 116 1.11e-43 149
Msa1056650 AT5G26660.1 56.667 120 50 1 1 120 1 118 1.58e-43 149
Msa1056650 AT4G12350.1 56.349 126 55 0 14 139 12 137 1.75e-43 147
Msa1056650 AT5G65230.1 59.292 113 46 0 8 120 6 118 1.81e-43 148
Msa1056650 AT4G28110.1 61.111 108 42 0 14 121 12 119 2.10e-43 147
Msa1056650 AT3G27920.1 52.846 123 58 0 10 132 10 132 2.19e-43 145
Msa1056650 AT3G11440.2 60.194 103 41 0 14 116 41 143 3.00e-43 151
Msa1056650 AT2G16720.1 64.078 103 37 0 16 118 14 116 3.19e-43 146
Msa1056650 AT5G61420.2 55.000 120 52 1 1 120 1 118 4.01e-43 148
Msa1056650 AT5G07690.1 57.759 116 47 1 1 116 1 114 4.11e-43 147
Msa1056650 AT2G32460.2 53.659 123 54 1 14 133 6 128 4.46e-43 150
Msa1056650 AT2G32460.1 53.659 123 54 1 14 133 18 140 4.64e-43 150
Msa1056650 AT3G13540.1 53.488 129 59 1 1 128 10 138 4.81e-43 145
Msa1056650 AT3G62610.1 61.905 105 40 0 14 118 12 116 4.86e-43 147
Msa1056650 AT3G23250.1 60.377 106 42 0 14 119 12 117 5.51e-43 146
Msa1056650 AT5G06100.1 61.165 103 40 0 14 116 32 134 6.24e-43 150
Msa1056650 AT5G60890.1 59.459 111 45 0 10 120 8 118 6.55e-43 146
Msa1056650 AT4G17785.2 59.167 120 48 1 1 120 1 119 7.01e-43 147
Msa1056650 AT4G17785.1 59.167 120 48 1 1 120 1 119 8.62e-43 147
Msa1056650 AT5G10280.1 56.250 112 49 0 9 120 7 118 9.03e-43 147
Msa1056650 AT4G21440.1 60.952 105 41 0 14 118 12 116 9.46e-43 147
Msa1056650 AT3G01140.2 62.857 105 39 0 14 118 12 116 9.73e-43 147
Msa1056650 AT4G05100.1 57.627 118 49 1 1 118 1 117 9.79e-43 146
Msa1056650 AT4G22680.1 61.905 105 40 0 14 118 12 116 1.06e-42 144
Msa1056650 AT5G07700.1 60.000 105 42 0 14 118 12 116 1.20e-42 146
Msa1056650 AT5G07700.2 60.000 105 42 0 14 118 12 116 1.20e-42 146
Msa1056650 AT3G11440.3 60.194 103 41 0 14 116 41 143 2.13e-42 150
Msa1056650 AT3G11440.4 60.194 103 41 0 14 116 41 143 2.13e-42 150
Msa1056650 AT3G11440.1 60.194 103 41 0 14 116 41 143 2.13e-42 150
Msa1056650 AT3G01140.1 62.857 105 39 0 14 118 55 159 2.22e-42 147
Msa1056650 AT1G79180.1 59.259 108 44 0 14 121 14 121 2.24e-42 144
Msa1056650 AT3G13890.1 53.543 127 48 2 1 118 1 125 2.65e-42 146
Msa1056650 AT5G06100.5 61.165 103 40 0 14 116 32 134 3.15e-42 149
Msa1056650 AT5G06100.2 61.165 103 40 0 14 116 32 134 3.15e-42 149
Msa1056650 AT5G06100.3 61.165 103 40 0 14 116 32 134 3.15e-42 149
Msa1056650 AT5G06100.4 61.165 103 40 0 14 116 32 134 3.15e-42 149
Msa1056650 AT5G15310.4 61.905 105 40 0 14 118 12 116 3.37e-42 143
Msa1056650 AT5G12870.1 52.941 119 56 0 6 124 10 128 3.62e-42 144
Msa1056650 AT5G15310.1 61.905 105 40 0 14 118 12 116 4.29e-42 145
Msa1056650 AT4G26930.1 56.481 108 47 0 14 121 19 126 5.11e-42 146
Msa1056650 AT5G16600.1 59.813 107 43 0 14 120 12 118 5.49e-42 144
Msa1056650 AT5G49330.1 61.905 105 40 0 14 118 12 116 5.63e-42 145
Msa1056650 AT5G15310.2 61.905 105 40 0 14 118 12 116 5.99e-42 144
Msa1056650 AT1G66230.1 57.407 108 46 0 14 121 12 119 8.33e-42 143
Msa1056650 AT1G18570.1 61.905 105 40 0 14 118 13 117 9.72e-42 144
Msa1056650 AT1G56160.1 51.449 138 66 1 14 151 14 150 1.19e-41 143
Msa1056650 AT4G01680.3 55.462 119 51 1 1 119 1 117 2.77e-41 140
Msa1056650 AT5G52600.1 56.140 114 46 1 14 127 12 121 2.80e-41 139
Msa1056650 AT3G53200.1 57.018 114 48 1 10 123 5 117 3.53e-41 140
Msa1056650 AT3G61250.1 59.048 105 43 0 14 118 12 116 4.01e-41 141
Msa1056650 AT3G47600.1 55.856 111 49 0 14 124 12 122 4.10e-41 142
Msa1056650 AT5G14340.1 58.879 107 44 0 14 120 24 130 4.53e-41 140
Msa1056650 AT1G08810.1 46.622 148 74 2 14 156 12 159 5.83e-41 140
Msa1056650 AT5G55020.1 55.556 108 48 0 14 121 26 133 6.38e-41 145
Msa1056650 AT4G01680.1 55.462 119 51 1 1 119 1 117 8.20e-41 142
Msa1056650 AT1G34670.1 58.879 107 44 0 14 120 12 118 8.79e-41 142
Msa1056650 AT3G08500.1 56.481 108 47 0 12 119 28 135 8.86e-41 142
Msa1056650 AT5G62470.2 55.856 111 49 0 14 124 12 122 1.73e-40 141
Msa1056650 AT3G12720.1 57.143 105 45 0 14 118 22 126 2.91e-40 139
Msa1056650 AT1G74650.1 57.547 106 45 0 13 118 11 116 9.55e-40 139
Msa1056650 AT3G28910.1 53.043 115 54 0 14 128 12 126 1.15e-39 138
Msa1056650 AT1G74430.1 57.944 107 45 0 14 120 12 118 1.27e-39 137
Msa1056650 AT1G74080.1 60.194 103 41 0 14 116 12 114 3.32e-39 137
Msa1056650 AT2G26960.1 56.436 101 44 0 16 116 22 122 6.10e-39 139
Msa1056650 AT5G62470.1 55.856 111 48 1 14 124 12 121 1.74e-38 136
Msa1056650 AT5G62320.1 56.250 112 42 1 14 118 13 124 2.25e-38 133
Msa1056650 AT4G37780.1 52.991 117 54 1 14 129 12 128 4.37e-38 134
Msa1056650 AT3G12820.1 55.752 113 47 1 6 118 9 118 1.88e-37 130
Msa1056650 AT4G01680.2 50.382 131 51 2 1 119 1 129 1.90e-37 133
Msa1056650 AT3G49690.1 52.991 117 54 1 13 128 11 127 1.03e-36 130
Msa1056650 AT5G65790.1 52.137 117 55 1 13 128 11 127 4.07e-36 130
Msa1056650 AT5G23000.1 55.660 106 46 1 14 118 12 117 4.54e-36 129
Msa1056650 AT5G56110.1 53.774 106 49 0 13 118 11 116 7.36e-36 128
Msa1056650 AT1G18710.1 55.140 107 48 0 14 120 12 118 8.49e-36 127
Msa1056650 AT1G79180.2 45.390 141 44 1 14 121 14 154 9.96e-36 128
Msa1056650 AT3G28470.1 56.000 100 44 0 13 112 11 110 1.55e-35 127
Msa1056650 AT5G57620.1 54.206 107 48 1 13 118 11 117 1.66e-35 127
Msa1056650 AT2G36890.1 56.075 107 46 1 13 118 11 117 2.04e-35 127
Msa1056650 AT3G48920.1 47.414 116 59 1 15 128 19 134 2.74e-35 125
Msa1056650 AT4G25560.1 53.922 102 47 0 15 116 11 112 2.79e-35 126
Msa1056650 AT2G36890.2 56.075 107 46 1 13 118 52 158 3.60e-35 127
Msa1056650 AT3G46130.3 66.667 78 26 0 45 122 8 85 5.39e-35 124
Msa1056650 AT5G59780.2 66.250 80 27 0 47 126 20 99 6.14e-35 123
Msa1056650 AT5G52260.1 50.420 119 58 1 15 133 13 130 8.90e-35 124
Msa1056650 AT3G46130.4 68.421 76 24 0 47 122 20 95 1.98e-34 122
Msa1056650 AT1G66370.1 52.427 103 49 0 14 116 8 110 6.20e-33 119
Msa1056650 AT3G60460.1 46.667 105 55 1 13 116 10 114 7.49e-33 120
Msa1056650 AT5G35550.2 51.818 110 49 1 42 151 45 150 2.82e-31 115
Msa1056650 AT3G53200.2 64.935 77 26 1 47 123 9 84 6.07e-31 112
Msa1056650 AT1G66380.1 53.398 103 48 0 14 116 8 110 5.91e-30 108
Msa1056650 AT5G26660.2 63.514 74 27 0 47 120 14 87 1.57e-29 112
Msa1056650 AT1G56650.1 53.398 103 48 0 14 116 8 110 2.92e-29 109
Msa1056650 AT2G26950.1 45.918 98 53 0 16 113 18 115 1.13e-28 110
Msa1056650 AT1G66390.1 53.398 103 48 0 14 116 8 110 1.48e-28 107
Msa1056650 AT5G14750.3 47.107 121 56 3 42 156 5 123 2.67e-28 105
Msa1056650 AT3G12820.2 63.768 69 25 0 50 118 2 70 1.35e-26 101
Msa1056650 AT3G47600.2 56.410 78 34 0 47 124 39 116 2.05e-26 103
Msa1056650 AT3G27785.1 40.496 121 70 2 3 122 176 295 3.67e-26 104
Msa1056650 AT2G23290.1 39.706 136 81 1 7 142 4 138 6.18e-26 102
Msa1056650 AT5G11510.2 42.593 108 61 1 11 118 76 182 7.77e-26 104
Msa1056650 AT5G11510.2 32.456 114 75 2 16 128 29 141 1.60e-11 63.2
Msa1056650 AT5G11510.3 42.593 108 61 1 11 118 76 182 8.29e-26 104
Msa1056650 AT5G11510.3 32.456 114 75 2 16 128 29 141 2.06e-11 63.2
Msa1056650 AT5G11510.1 42.593 108 61 1 11 118 76 182 8.29e-26 104
Msa1056650 AT5G11510.1 32.456 114 75 2 16 128 29 141 2.06e-11 63.2
Msa1056650 AT5G11510.4 42.593 108 61 1 11 118 76 182 8.29e-26 104
Msa1056650 AT5G11510.4 32.456 114 75 2 16 128 29 141 2.06e-11 63.2
Msa1056650 AT5G11510.5 42.593 108 61 1 11 118 76 182 8.65e-26 104
Msa1056650 AT5G11510.5 32.456 114 75 2 16 128 29 141 1.73e-11 63.2
Msa1056650 AT5G02320.1 43.119 109 61 1 11 119 122 229 3.04e-25 102
Msa1056650 AT5G02320.2 43.119 109 61 1 11 119 122 229 3.04e-25 102
Msa1056650 AT3G09370.2 44.340 106 58 1 11 116 130 234 3.28e-25 102
Msa1056650 AT3G09370.2 36.792 106 65 2 16 120 83 187 8.89e-11 60.8
Msa1056650 AT3G09370.3 44.340 106 58 1 11 116 138 242 3.62e-25 102
Msa1056650 AT3G09370.3 36.792 106 65 2 16 120 91 195 8.29e-11 61.2
Msa1056650 AT3G09370.1 44.340 106 58 1 11 116 125 229 3.68e-25 102
Msa1056650 AT3G09370.1 36.792 106 65 2 16 120 78 182 9.83e-11 60.8
Msa1056650 AT5G02320.3 43.119 109 61 1 11 119 62 169 5.25e-25 102
Msa1056650 AT3G09230.1 37.419 155 94 2 13 165 52 205 7.35e-25 100
Msa1056650 AT4G18770.1 47.368 95 49 1 16 110 217 310 3.04e-24 99.4
Msa1056650 AT5G11050.1 39.837 123 71 2 13 133 102 223 4.48e-24 99.0
Msa1056650 AT5G58850.1 40.476 126 66 3 16 141 105 221 7.94e-24 98.2
Msa1056650 AT3G50060.1 36.875 160 93 4 13 171 3 155 8.35e-24 96.3
Msa1056650 AT4G32730.5 38.889 108 65 1 11 118 82 188 1.28e-23 98.6
Msa1056650 AT4G32730.5 32.456 114 75 2 16 128 35 147 2.91e-11 62.4
Msa1056650 AT4G32730.4 38.889 108 65 1 11 118 82 188 1.28e-23 98.6
Msa1056650 AT4G32730.4 32.456 114 75 2 16 128 35 147 2.91e-11 62.4
Msa1056650 AT4G32730.3 38.889 108 65 1 11 118 82 188 1.28e-23 98.6
Msa1056650 AT4G32730.3 32.456 114 75 2 16 128 35 147 2.91e-11 62.4
Msa1056650 AT4G32730.2 38.889 108 65 1 11 118 82 188 1.28e-23 98.6
Msa1056650 AT4G32730.2 32.456 114 75 2 16 128 35 147 2.91e-11 62.4
Msa1056650 AT4G32730.1 38.889 108 65 1 11 118 82 188 1.47e-23 98.2
Msa1056650 AT4G32730.1 32.456 114 75 2 16 128 35 147 2.76e-11 62.8
Msa1056650 AT4G37260.1 45.545 101 54 1 16 116 13 112 2.66e-23 95.5
Msa1056650 AT1G69560.1 37.190 121 75 1 4 124 95 214 3.48e-23 95.1
Msa1056650 AT1G69560.2 37.190 121 75 1 4 124 111 230 4.08e-23 95.1
Msa1056650 AT3G55730.1 45.545 101 54 1 16 116 56 155 4.76e-23 95.9
Msa1056650 AT3G29020.1 37.600 125 76 2 16 139 65 188 2.40e-22 91.3
Msa1056650 AT3G29020.2 37.600 125 76 2 16 139 67 190 4.12e-22 92.0
Msa1056650 AT5G40360.1 43.299 97 54 1 14 110 156 251 4.59e-22 92.4
Msa1056650 AT5G67300.1 43.269 104 58 1 13 116 3 105 1.49e-21 90.5
Msa1056650 AT2G39880.1 44.554 101 55 1 16 116 50 149 1.63e-21 91.3
Msa1056650 AT1G22640.3 37.662 154 75 5 60 207 1 139 5.06e-21 87.0
Msa1056650 AT5G17800.1 36.607 112 70 1 16 127 93 203 9.12e-21 88.6
Msa1056650 AT5G14750.4 51.282 78 37 1 60 136 1 78 2.75e-20 83.6
Msa1056650 AT5G14750.2 51.282 78 37 1 60 136 1 78 2.75e-20 83.6
Msa1056650 AT4G00540.2 34.395 157 91 4 11 156 98 253 3.23e-20 87.8
Msa1056650 AT1G14350.2 43.564 101 56 1 19 119 28 127 3.37e-20 88.2
Msa1056650 AT1G14350.1 43.564 101 56 1 19 119 28 127 3.37e-20 88.2
Msa1056650 AT1G17950.1 37.607 117 72 1 16 132 5 120 3.55e-20 85.9
Msa1056650 AT4G00540.1 34.395 157 91 4 11 156 96 251 4.63e-20 87.8
Msa1056650 AT3G23250.2 60.000 60 24 0 60 119 1 60 4.75e-20 85.1
Msa1056650 AT1G26780.2 38.095 105 64 1 16 120 98 201 6.96e-20 86.7
Msa1056650 AT1G26780.1 35.088 114 73 1 16 129 98 210 7.56e-20 85.5
Msa1056650 AT2G25230.1 30.622 209 120 6 13 203 23 224 8.04e-20 84.3
Msa1056650 AT5G59780.1 63.636 55 20 0 72 126 1 55 8.08e-20 82.8
Msa1056650 AT2G37630.1 32.090 134 84 2 19 150 7 135 1.37e-19 85.9
Msa1056650 AT3G46130.2 69.388 49 15 0 72 120 1 49 2.00e-19 82.4
Msa1056650 AT1G66380.3 53.947 76 35 0 41 116 2 77 2.04e-19 80.1
Msa1056650 AT5G39700.1 34.722 144 78 3 15 150 55 190 2.95e-19 82.0
Msa1056650 AT1G73410.1 42.056 107 59 2 16 121 6 110 3.55e-19 82.8
Msa1056650 AT1G73410.2 42.056 107 59 2 16 121 6 110 9.39e-19 80.9
Msa1056650 AT4G33450.1 36.036 111 70 1 10 120 13 122 1.19e-18 81.6
Msa1056650 AT1G18960.1 35.897 117 67 3 4 120 3 111 1.61e-18 82.0
Msa1056650 AT2G02820.1 42.574 101 57 1 19 119 33 132 7.14e-18 81.6
Msa1056650 AT2G02820.3 42.574 101 57 1 19 119 33 132 7.25e-18 80.9
Msa1056650 AT2G02820.2 42.574 101 57 1 19 119 33 132 7.36e-18 81.6
Msa1056650 AT1G66380.2 50.000 78 39 0 14 91 8 85 8.94e-18 75.9
Msa1056650 AT1G71030.2 53.125 64 30 0 53 116 5 68 1.45e-17 77.4
Msa1056650 AT1G71030.1 46.154 78 41 1 41 118 8 84 1.70e-17 77.4
Msa1056650 AT5G40430.1 33.333 162 93 6 2 153 37 193 6.23e-17 77.0
Msa1056650 AT1G14350.3 46.774 62 33 0 58 119 23 84 9.97e-13 66.6
Msa1056650 AT1G14350.4 46.774 62 33 0 58 119 23 84 9.97e-13 66.6
Msa1056650 AT3G18100.1 38.462 104 62 2 14 117 544 645 1.18e-12 66.6
Msa1056650 AT3G18100.4 38.462 104 62 2 14 117 383 484 1.34e-12 66.2
Msa1056650 AT3G18100.3 38.462 104 62 2 14 117 496 597 1.40e-12 66.2
Msa1056650 AT3G18100.2 38.462 104 62 2 14 117 331 432 1.79e-12 65.9
Msa1056650 AT4G25560.2 57.778 45 19 0 72 116 2 46 1.98e-12 64.3
Msa1056650 AT1G16490.2 46.970 66 33 1 78 143 11 74 2.13e-11 61.2

Find 55 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCTCTTACCAAGGAATTT+TGG 0.171003 7_2:+34895281 Msa1056650:CDS
GTTCAGCAATGTTGGAAATT+TGG 0.179145 7_2:-34895233 None:intergenic
CAGCTTGCTTGATATGCTTT+TGG 0.186213 7_2:-34895128 None:intergenic
CCGAAGCCTGCAACTCTTTC+CGG 0.204393 7_2:-34890584 None:intergenic
GTAGTTCTTTATCTCATTAT+CGG 0.309254 7_2:-34895091 None:intergenic
TTGTCACTGCAACTACTAAA+TGG 0.327480 7_2:+34895384 Msa1056650:CDS
CCAAACACCTTCACCATGAT+TGG 0.346620 7_2:-34890293 None:intergenic
CCAATCATGGTGAAGGTGTT+TGG 0.360993 7_2:+34890293 Msa1056650:CDS
AATAATAATAATCAATGTAT+AGG 0.367901 7_2:+34895201 Msa1056650:CDS
AACGTACCGGAAAGAGTTGC+AGG 0.368952 7_2:+34890578 Msa1056650:CDS
TTCCAACATTGCTGAACCTA+TGG 0.392818 7_2:+34895239 Msa1056650:CDS
AGAGGGTGGTGAGATAATAT+TGG 0.413544 7_2:-34895265 None:intergenic
AATCAAGTTGTTCTAACTAC+TGG 0.421398 7_2:+34895346 Msa1056650:CDS
TTCATGCTAAGTGGGGAAAC+AGG 0.422675 7_2:+34890680 Msa1056650:CDS
CTTGATTGATCAGAGATTGT+AGG 0.449822 7_2:-34895330 None:intergenic
TTCCAAAATTCCTTGGTAAG+AGG 0.451401 7_2:-34895283 None:intergenic
ATCAACTATATTGCCAATCA+TGG 0.459614 7_2:+34890280 Msa1056650:CDS
GAAATGGTTCCAAAATTCCT+TGG 0.461055 7_2:-34895290 None:intergenic
CCGGAAAGAGTTGCAGGCTT+CGG 0.464657 7_2:+34890584 Msa1056650:CDS
GAAAATCGCGAAACATTTAC+CGG 0.464673 7_2:+34895062 Msa1056650:CDS
TCCAAAATTCCTTGGTAAGA+GGG 0.465311 7_2:-34895282 None:intergenic
CATGGTCCCTTTCGTACATC+AGG 0.468269 7_2:-34890232 None:intergenic
ATAATGAGATAAAGAACTAC+TGG 0.481229 7_2:+34895094 Msa1056650:CDS
CATTGAACTTCATGCTAAGT+GGG 0.494832 7_2:+34890672 Msa1056650:CDS
GTCCATAGGTTCAGCAATGT+TGG 0.497472 7_2:-34895241 None:intergenic
TTGATTGATCAGAGATTGTA+GGG 0.501770 7_2:-34895329 None:intergenic
ATATTCCCTCGTCTAACATC+AGG 0.503266 7_2:-34890625 None:intergenic
AACTCCTTGGCTAAATCTGC+TGG 0.506754 7_2:+34890316 Msa1056650:CDS
ATGATCAAGAGTTGTTCCTC+AGG 0.507271 7_2:-34890652 None:intergenic
AAGTCTTCTTCCATTGTCCA+TGG 0.510332 7_2:-34890250 None:intergenic
AACTGATGATGAGTTGGAAA+TGG 0.536466 7_2:-34895306 None:intergenic
TCATTGAACTTCATGCTAAG+TGG 0.536877 7_2:+34890671 Msa1056650:CDS
ATCTCATTATCGGTTCTCCC+CGG 0.551091 7_2:-34895081 None:intergenic
TGAAGGTGTTTGGAACTCCT+TGG 0.569511 7_2:+34890303 Msa1056650:CDS
CAAGATCCTGATGTACGAAA+GGG 0.574930 7_2:+34890226 Msa1056650:CDS
GTAGGGAACTGATGATGAGT+TGG 0.576459 7_2:-34895312 None:intergenic
GAAAGAGTTGCAGGCTTCGG+TGG 0.580113 7_2:+34890587 Msa1056650:CDS
ATCTCACCACCCTCTTACCA+AGG 0.583108 7_2:+34895273 Msa1056650:CDS
TATATTGCCAATCATGGTGA+AGG 0.589500 7_2:+34890286 Msa1056650:CDS
TTGTTCTAACTACTGGAGCA+TGG 0.590689 7_2:+34895353 Msa1056650:CDS
ACAAGATCCTGATGTACGAA+AGG 0.594892 7_2:+34890225 Msa1056650:CDS
GAGATAATATTGGTGTCCAT+AGG 0.606109 7_2:-34895255 None:intergenic
AACTCTCAATCTCAAGAACA+AGG 0.607217 7_2:+34895153 Msa1056650:CDS
TAAAGAACTACTGGAGGACA+AGG 0.615004 7_2:+34895103 Msa1056650:CDS
CTTCGACCTGATGTTAGACG+AGG 0.623587 7_2:+34890619 Msa1056650:CDS
CTGATGTACGAAAGGGACCA+TGG 0.624475 7_2:+34890233 Msa1056650:CDS
ATTACCAGCAGATTTAGCCA+AGG 0.626193 7_2:-34890320 None:intergenic
AAAATCGCGAAACATTTACC+GGG 0.627319 7_2:+34895063 Msa1056650:CDS
AAAATTCCTTGGTAAGAGGG+TGG 0.641242 7_2:-34895279 None:intergenic
ACGAAAGGGACCATGGACAA+TGG 0.642783 7_2:+34890240 Msa1056650:CDS
ATGAGATAAAGAACTACTGG+AGG 0.648874 7_2:+34895097 Msa1056650:CDS
TTCGACCTGATGTTAGACGA+GGG 0.661220 7_2:+34890620 Msa1056650:CDS
ATTGAACTTCATGCTAAGTG+GGG 0.662589 7_2:+34890673 Msa1056650:CDS
ACGAGGGAATATTACACCTG+AGG 0.692927 7_2:+34890636 Msa1056650:CDS
AAATCGCGAAACATTTACCG+GGG 0.720551 7_2:+34895064 Msa1056650:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATAAAATAAAATAAA+AGG + chr7_2:34893490-34893509 Msa1056650:intron 0.0%
!! TAAAATAAAATAAAATAAAA+GGG + chr7_2:34893491-34893510 Msa1056650:intron 0.0%
!!! CATTTTATCATATAAATTTT+TGG + chr7_2:34891278-34891297 Msa1056650:intron 10.0%
!!! TAAATATGTTCTTATTTATA+GGG - chr7_2:34891534-34891553 None:intergenic 10.0%
!!! ATTATATATATTTTGAAGTA+TGG - chr7_2:34892502-34892521 None:intergenic 10.0%
!!! TTCTTTTTATTATTTAAGAA+AGG - chr7_2:34892605-34892624 None:intergenic 10.0%
!! ATATAAGTATAAGAAAATAT+CGG - chr7_2:34892638-34892657 None:intergenic 10.0%
!!! TAAATATATATTGTTTTGAA+CGG - chr7_2:34893091-34893110 None:intergenic 10.0%
!! AAATAAAATAAAATAAAAGG+GGG + chr7_2:34893493-34893512 Msa1056650:intron 10.0%
!!! ATATTATTTTATTTGTCATT+CGG - chr7_2:34893917-34893936 None:intergenic 10.0%
!! AATAATAATAATCAATGTAT+AGG + chr7_2:34895201-34895220 Msa1056650:CDS 10.0%
!! CATAAATCATCATAATAATA+TGG + chr7_2:34890534-34890553 Msa1056650:intron 15.0%
!!! TTTGCTTTATTTTTAACTTT+TGG + chr7_2:34890887-34890906 Msa1056650:intron 15.0%
!!! TTGTTATGTTGATAAATAAA+AGG - chr7_2:34891191-34891210 None:intergenic 15.0%
!! TAATATTATAAGATTAGTGA+TGG + chr7_2:34891244-34891263 Msa1056650:intron 15.0%
!!! CTATAATGTCTTATTTTTAT+TGG - chr7_2:34891420-34891439 None:intergenic 15.0%
!!! CTAAATATGTTCTTATTTAT+AGG - chr7_2:34891535-34891554 None:intergenic 15.0%
!!! ATGAAATATTTTCTTAATCA+AGG - chr7_2:34891851-34891870 None:intergenic 15.0%
!!! TATTTTGAAAAATATCATGT+TGG + chr7_2:34892246-34892265 Msa1056650:intron 15.0%
!! TATAAGTATAAGAAAATATC+GGG - chr7_2:34892637-34892656 None:intergenic 15.0%
!!! CTATGTATTTATTTAAAACA+AGG + chr7_2:34893138-34893157 Msa1056650:intron 15.0%
!!! GTTTTCTGTTTATTTAATTA+CGG - chr7_2:34893378-34893397 None:intergenic 15.0%
!! GTAATTAAATAAACAGAAAA+CGG + chr7_2:34893377-34893396 Msa1056650:intron 15.0%
!!! CTATTCTCTTTTTTTTTTTT+TGG - chr7_2:34893552-34893571 None:intergenic 15.0%
!! CAAAAAAAAAAAAAGAGAAT+AGG + chr7_2:34893550-34893569 Msa1056650:intron 15.0%
!!! ATTTTTAAAACTTTGGTATA+AGG - chr7_2:34893844-34893863 None:intergenic 15.0%
!!! TATACCAAAGTTTTAAAAAT+TGG + chr7_2:34893844-34893863 Msa1056650:intron 15.0%
!!! AATTGATAGAGAATAATTTT+TGG + chr7_2:34894006-34894025 Msa1056650:intron 15.0%
!!! CTATACACTCATTAAATTTT+AGG - chr7_2:34890462-34890481 None:intergenic 20.0%
!!! AATATGGTTTCAAACATTTT+AGG + chr7_2:34890550-34890569 Msa1056650:intron 20.0%
!!! GGTTTGTATTATTTTTACAA+GGG + chr7_2:34890996-34891015 Msa1056650:intron 20.0%
!!! GTTTGTATTATTTTTACAAG+GGG + chr7_2:34890997-34891016 Msa1056650:intron 20.0%
!!! TTATAGATAGATTTTGTACA+TGG - chr7_2:34891066-34891085 None:intergenic 20.0%
!! AATTTATAACTACAAATGAG+AGG - chr7_2:34891217-34891236 None:intergenic 20.0%
!! ATAAGACATTATAGTTCAAA+CGG + chr7_2:34891426-34891445 Msa1056650:intron 20.0%
!!! TTTTTAAATCTTCTCTAGAA+TGG - chr7_2:34891503-34891522 None:intergenic 20.0%
!!! CAAATATGTTTTTGTTTACA+AGG - chr7_2:34891558-34891577 None:intergenic 20.0%
!! CTTGTAAACAAAAACATATT+TGG + chr7_2:34891556-34891575 Msa1056650:intron 20.0%
!!! TTCAATTGTTTTTTGAGATA+AGG - chr7_2:34891588-34891607 None:intergenic 20.0%
!! GATTTGTATATATGTCATTA+AGG + chr7_2:34891824-34891843 Msa1056650:intron 20.0%
!!! ATCACTTTACTTTTTGTATT+TGG + chr7_2:34892092-34892111 Msa1056650:intron 20.0%
!!! TCACTTTACTTTTTGTATTT+GGG + chr7_2:34892093-34892112 Msa1056650:intron 20.0%
!! TGTAAAGAAAGAGAAAAATT+AGG + chr7_2:34892200-34892219 Msa1056650:intron 20.0%
!! GTAAAGAAAGAGAAAAATTA+GGG + chr7_2:34892201-34892220 Msa1056650:intron 20.0%
!!! TGATATTTTTCAAAATAGAG+TGG - chr7_2:34892243-34892262 None:intergenic 20.0%
!!! TTTTTATGTTGAAGATGTAA+AGG - chr7_2:34892311-34892330 None:intergenic 20.0%
!!! TATATATTTTGAAGTATGGT+GGG - chr7_2:34892498-34892517 None:intergenic 20.0%
!!! ATATATATTTTGAAGTATGG+TGG - chr7_2:34892499-34892518 None:intergenic 20.0%
!!! AATTTTGAAAATGCTTGATT+TGG - chr7_2:34892580-34892599 None:intergenic 20.0%
!! GCGTCAATATATAATAATTA+AGG - chr7_2:34893467-34893486 None:intergenic 20.0%
!! ATGTATATTTCAACAAAGAT+CGG + chr7_2:34893711-34893730 Msa1056650:intron 20.0%
!! AAAGCAAGGTTATATAATAT+AGG - chr7_2:34893740-34893759 None:intergenic 20.0%
!!! ATTAATTTGCAAAAGAATGT+TGG - chr7_2:34895021-34895040 None:intergenic 20.0%
!!! GGGTTTGTATTATTTTTACA+AGG + chr7_2:34890995-34891014 Msa1056650:intron 25.0%
!! ATGTTGATAAATAAAAGGAG+AGG - chr7_2:34891186-34891205 None:intergenic 25.0%
!! TAAACTATAGATCTAGGATA+TGG - chr7_2:34891373-34891392 None:intergenic 25.0%
! CATTCATAAACTATAGATCT+AGG - chr7_2:34891379-34891398 None:intergenic 25.0%
! GATCTATAGTTTATGAATGT+TGG + chr7_2:34891380-34891399 Msa1056650:intron 25.0%
!! TATGTTCTTATTTATAGGGT+GGG - chr7_2:34891530-34891549 None:intergenic 25.0%
!! ATATGTTCTTATTTATAGGG+TGG - chr7_2:34891531-34891550 None:intergenic 25.0%
! GTAAACAAAAACATATTTGG+AGG + chr7_2:34891559-34891578 Msa1056650:intron 25.0%
! CTATAGAAAAGTAAAGAAGA+AGG + chr7_2:34891732-34891751 Msa1056650:intron 25.0%
! TGATGATAAAAAGAAAGACA+TGG + chr7_2:34891765-34891784 Msa1056650:intron 25.0%
! AATCCAAAATCTTATGTTTC+AGG - chr7_2:34891808-34891827 None:intergenic 25.0%
! GAATCCATATTCAATAAAGT+GGG - chr7_2:34891961-34891980 None:intergenic 25.0%
! TGAATCCATATTCAATAAAG+TGG - chr7_2:34891962-34891981 None:intergenic 25.0%
! AAGTATAGAGAAAAATGAAG+AGG + chr7_2:34892048-34892067 Msa1056650:intron 25.0%
! AAAATAAGTGTTAGCTAGAA+TGG + chr7_2:34892157-34892176 Msa1056650:intron 25.0%
! CAACATAAAAAGACTAGAAA+AGG + chr7_2:34892320-34892339 Msa1056650:intron 25.0%
!!! ATATATTTTGAAGTATGGTG+GGG - chr7_2:34892497-34892516 None:intergenic 25.0%
! AGGTTACATAAAAGTTTACA+TGG - chr7_2:34892716-34892735 None:intergenic 25.0%
! TCAAAGTTAAGTTAGTTGAT+GGG - chr7_2:34892826-34892845 None:intergenic 25.0%
!!! ATTCTAAAATAGAGTTGATG+AGG - chr7_2:34892910-34892929 None:intergenic 25.0%
! TGGTAAATGATATTTGAGAA+AGG - chr7_2:34893063-34893082 None:intergenic 25.0%
!!! GAATATTTTTGAACTTGAAG+AGG + chr7_2:34893627-34893646 Msa1056650:intron 25.0%
! TTAAAACTTTGGTATAAGGT+TGG - chr7_2:34893840-34893859 None:intergenic 25.0%
!!! AGGTCCAATTTTTAAAACTT+TGG - chr7_2:34893851-34893870 None:intergenic 25.0%
!! ATCAGTTTATTTGGTTCAAT+CGG + chr7_2:34893875-34893894 Msa1056650:intron 25.0%
! AATCATTTGAACCAACATAA+TGG + chr7_2:34894136-34894155 Msa1056650:intron 25.0%
! ACCTTAGAAAAAGAAACTAT+GGG - chr7_2:34894262-34894281 None:intergenic 25.0%
! AACCTTAGAAAAAGAAACTA+TGG - chr7_2:34894263-34894282 None:intergenic 25.0%
! GATTTATAGCTTCTTTAGTT+AGG + chr7_2:34894825-34894844 Msa1056650:intron 25.0%
! GATAAGTAAAAACTGATCAA+GGG - chr7_2:34894896-34894915 None:intergenic 25.0%
! AGATAAGTAAAAACTGATCA+AGG - chr7_2:34894897-34894916 None:intergenic 25.0%
!!! TTTTTTTCGTATTAACCATC+TGG - chr7_2:34894944-34894963 None:intergenic 25.0%
! GAATGTTGGAGATATATAAT+TGG - chr7_2:34895007-34895026 None:intergenic 25.0%
! GTAGTTCTTTATCTCATTAT+CGG - chr7_2:34895094-34895113 None:intergenic 25.0%
! ATAATGAGATAAAGAACTAC+TGG + chr7_2:34895094-34895113 Msa1056650:CDS 25.0%
ATCAACTATATTGCCAATCA+TGG + chr7_2:34890280-34890299 Msa1056650:CDS 30.0%
TTAAAAAGAATGACCTAGCT+TGG + chr7_2:34890489-34890508 Msa1056650:intron 30.0%
!! ATTTTAGGTCTTAAACGTAC+CGG + chr7_2:34890565-34890584 Msa1056650:intron 30.0%
TTGGAATAGTGTTTGTAAAG+TGG + chr7_2:34890934-34890953 Msa1056650:intron 30.0%
TGGAATAGTGTTTGTAAAGT+GGG + chr7_2:34890935-34890954 Msa1056650:intron 30.0%
TGAGAATAGTTGCAATACTT+TGG + chr7_2:34890973-34890992 Msa1056650:intron 30.0%
GAGAATAGTTGCAATACTTT+GGG + chr7_2:34890974-34890993 Msa1056650:intron 30.0%
AGAATAGTTGCAATACTTTG+GGG + chr7_2:34890975-34890994 Msa1056650:intron 30.0%
TACTGTGTATTTCTTCGAAT+TGG + chr7_2:34891314-34891333 Msa1056650:intron 30.0%
ATAGTTTATGAATGTTGGTG+AGG + chr7_2:34891385-34891404 Msa1056650:intron 30.0%
ATTATAGTTCAAACGGAGAA+AGG + chr7_2:34891433-34891452 Msa1056650:intron 30.0%
!! TTGTTCATCCTTTAAAGTGT+TGG - chr7_2:34891474-34891493 None:intergenic 30.0%
! ATGTTCTTATTTATAGGGTG+GGG - chr7_2:34891529-34891548 None:intergenic 30.0%
AATCAAATATGATCTACACG+AGG + chr7_2:34891671-34891690 Msa1056650:intron 30.0%
! AAGCCTGAAACATAAGATTT+TGG + chr7_2:34891802-34891821 Msa1056650:intron 30.0%
!! GCTTCTAAAGCCAAAATATA+GGG + chr7_2:34891995-34892014 Msa1056650:intron 30.0%
!!! TGTTTTTTCTTTGTAGAGGT+AGG - chr7_2:34892133-34892152 None:intergenic 30.0%
!!! GTCTTGTTTTTTCTTTGTAG+AGG - chr7_2:34892137-34892156 None:intergenic 30.0%
AGCTAGAATGGATAAACAAA+AGG + chr7_2:34892169-34892188 Msa1056650:intron 30.0%
GCTAGAATGGATAAACAAAA+GGG + chr7_2:34892170-34892189 Msa1056650:intron 30.0%
GAGAAAAATTAGGGCAAAAA+AGG + chr7_2:34892210-34892229 Msa1056650:intron 30.0%
AAAAGGATTCACAAAGAAGA+TGG + chr7_2:34892337-34892356 Msa1056650:intron 30.0%
TGGTTTCTCTCTAAATCTAT+CGG - chr7_2:34892440-34892459 None:intergenic 30.0%
!!! TATATTTTGAAGTATGGTGG+GGG - chr7_2:34892496-34892515 None:intergenic 30.0%
AGTTTACATGGCGATTTATA+GGG - chr7_2:34892704-34892723 None:intergenic 30.0%
AAGTTTACATGGCGATTTAT+AGG - chr7_2:34892705-34892724 None:intergenic 30.0%
!!! TCTCTCTCTTTTTAAGTACT+CGG - chr7_2:34892763-34892782 None:intergenic 30.0%
! CAAAGTTAAGTTAGTTGATG+GGG - chr7_2:34892825-34892844 None:intergenic 30.0%
GTCAAAGTTAAGTTAGTTGA+TGG - chr7_2:34892827-34892846 None:intergenic 30.0%
AATCAGATAATGACAAGTTG+AGG + chr7_2:34892979-34892998 Msa1056650:intron 30.0%
! TTGAGGTACTATATAGGTTT+AGG + chr7_2:34892996-34893015 Msa1056650:intron 30.0%
ATATTTGAGAAAGGTAGTCA+GGG - chr7_2:34893054-34893073 None:intergenic 30.0%
!!! TATTGTTTTGAACGGCAATA+TGG - chr7_2:34893083-34893102 None:intergenic 30.0%
!! TAATGACTTTGCTTTGAAGA+AGG - chr7_2:34893654-34893673 None:intergenic 30.0%
TTTATCTCTCCATATAGCAA+AGG + chr7_2:34893674-34893693 Msa1056650:intron 30.0%
TTGAACCAAATAAACTGATG+CGG - chr7_2:34893874-34893893 None:intergenic 30.0%
AGTCCAACAACATATTGTTA+GGG + chr7_2:34894047-34894066 Msa1056650:intron 30.0%
! TTGAACCAACATAATGGAAT+CGG + chr7_2:34894142-34894161 Msa1056650:intron 30.0%
CTTAGAAAAAGAAACTATGG+GGG - chr7_2:34894260-34894279 None:intergenic 30.0%
CCTTAGAAAAAGAAACTATG+GGG - chr7_2:34894261-34894280 None:intergenic 30.0%
TTACACTACGAACTTTGATA+TGG + chr7_2:34894309-34894328 Msa1056650:intron 30.0%
AAGAGAAAGAAATTGTAGCA+GGG - chr7_2:34894396-34894415 None:intergenic 30.0%
AAAGAGAAAGAAATTGTAGC+AGG - chr7_2:34894397-34894416 None:intergenic 30.0%
! ATAAACCAACTTTTTGTAGG+AGG - chr7_2:34894429-34894448 None:intergenic 30.0%
! TCGATAAACCAACTTTTTGT+AGG - chr7_2:34894432-34894451 None:intergenic 30.0%
TAAAAGTTATGAATGTGGCA+GGG - chr7_2:34894618-34894637 None:intergenic 30.0%
TGAGGTAAAAGTTATGAATG+TGG - chr7_2:34894623-34894642 None:intergenic 30.0%
AAGAGCAAGTAAAAAAAGTG+AGG - chr7_2:34894641-34894660 None:intergenic 30.0%
! AACTTTTATATATGCCCTGA+TGG + chr7_2:34894667-34894686 Msa1056650:intron 30.0%
TTTCATCCATATATCAGACA+AGG - chr7_2:34894870-34894889 None:intergenic 30.0%
!!! ATTAACCATCTGGTTTTAAG+CGG - chr7_2:34894934-34894953 None:intergenic 30.0%
!!! GATTTCTAGTTTTAAGTGTC+TGG - chr7_2:34894985-34895004 None:intergenic 30.0%
AATTAATCATTCACCAATGC+AGG + chr7_2:34895034-34895053 Msa1056650:intron 30.0%
TTGATTGATCAGAGATTGTA+GGG - chr7_2:34895332-34895351 None:intergenic 30.0%
! AATCAAGTTGTTCTAACTAC+TGG + chr7_2:34895346-34895365 Msa1056650:CDS 30.0%
TATATTGCCAATCATGGTGA+AGG + chr7_2:34890286-34890305 Msa1056650:CDS 35.0%
TCATTGAACTTCATGCTAAG+TGG + chr7_2:34890671-34890690 Msa1056650:CDS 35.0%
CATTGAACTTCATGCTAAGT+GGG + chr7_2:34890672-34890691 Msa1056650:CDS 35.0%
ATTGAACTTCATGCTAAGTG+GGG + chr7_2:34890673-34890692 Msa1056650:CDS 35.0%
GGAATAGTGTTTGTAAAGTG+GGG + chr7_2:34890936-34890955 Msa1056650:intron 35.0%
GAATAGTGTTTGTAAAGTGG+GGG + chr7_2:34890937-34890956 Msa1056650:intron 35.0%
TGTGTATTTCTTCGAATTGG+AGG + chr7_2:34891317-34891336 Msa1056650:intron 35.0%
! TGTTCTTATTTATAGGGTGG+GGG - chr7_2:34891528-34891547 None:intergenic 35.0%
CACACCCACTTTATTGAATA+TGG + chr7_2:34891954-34891973 Msa1056650:intron 35.0%
!! CGCTTCTAAAGCCAAAATAT+AGG + chr7_2:34891994-34892013 Msa1056650:intron 35.0%
CTAAAGCCAAAATATAGGGT+CGG + chr7_2:34891999-34892018 Msa1056650:intron 35.0%
AAAATGAAGAGGACGATTGA+TGG + chr7_2:34892059-34892078 Msa1056650:intron 35.0%
! TTTTCTTTGTAGAGGTAGGA+AGG - chr7_2:34892129-34892148 None:intergenic 35.0%
GATGTAAAGGTCATACGAAA+TGG - chr7_2:34892298-34892317 None:intergenic 35.0%
AATCCTCTACAACTGCAATA+TGG + chr7_2:34892397-34892416 Msa1056650:intron 35.0%
!!! ATATTTTGAAGTATGGTGGG+GGG - chr7_2:34892495-34892514 None:intergenic 35.0%
CGTTTACATGGCGATTTATA+AGG - chr7_2:34892736-34892755 None:intergenic 35.0%
AGTCAATGACAAAGATAGGA+TGG - chr7_2:34892873-34892892 None:intergenic 35.0%
ATGCAGTCAATGACAAAGAT+AGG - chr7_2:34892877-34892896 None:intergenic 35.0%
! TATCTTTGTCATTGACTGCA+TGG + chr7_2:34892876-34892895 Msa1056650:intron 35.0%
! GACAAGTTGAGGTACTATAT+AGG + chr7_2:34892990-34893009 Msa1056650:intron 35.0%
! TATAGGTTTAGGATCCTCAT+AGG + chr7_2:34893007-34893026 Msa1056650:intron 35.0%
! ATAGGTTTAGGATCCTCATA+GGG + chr7_2:34893008-34893027 Msa1056650:intron 35.0%
GATATTTGAGAAAGGTAGTC+AGG - chr7_2:34893055-34893074 None:intergenic 35.0%
!! GCTTGTTTTCCTTTGCTATA+TGG - chr7_2:34893686-34893705 None:intergenic 35.0%
AACGGCTAAGAATAAAAGCA+AGG - chr7_2:34893754-34893773 None:intergenic 35.0%
TTATTCTTAGCCGTTGAACA+TGG + chr7_2:34893759-34893778 Msa1056650:intron 35.0%
! CTAGTATTTAAAGCTGCCAA+TGG - chr7_2:34893812-34893831 None:intergenic 35.0%
TCTCAAACGATTCATCATAG+AGG - chr7_2:34893985-34894004 None:intergenic 35.0%
CAGTCCAACAACATATTGTT+AGG + chr7_2:34894046-34894065 Msa1056650:intron 35.0%
AGACCCTAACAATATGTTGT+TGG - chr7_2:34894053-34894072 None:intergenic 35.0%
!!! TTTTTTAACCCTCCAGTTCT+TGG - chr7_2:34894082-34894101 None:intergenic 35.0%
! TTGAACCGATTCCATTATGT+TGG - chr7_2:34894150-34894169 None:intergenic 35.0%
AAACAAACCGATAAACTAGC+CGG + chr7_2:34894178-34894197 Msa1056650:intron 35.0%
!! TAATTGGTTCAAGTTGAACC+GGG - chr7_2:34894207-34894226 None:intergenic 35.0%
!! CTAATTGGTTCAAGTTGAAC+CGG - chr7_2:34894208-34894227 None:intergenic 35.0%
CCAATTAGTTGAACCAAATC+CGG + chr7_2:34894220-34894239 Msa1056650:intron 35.0%
! CCCCATAGTTTCTTTTTCTA+AGG + chr7_2:34894258-34894277 Msa1056650:intron 35.0%
AGAGAAAGAAATTGTAGCAG+GGG - chr7_2:34894395-34894414 None:intergenic 35.0%
CAATACCTCCTACAAAAAGT+TGG + chr7_2:34894421-34894440 Msa1056650:intron 35.0%
GTAAAAGTTATGAATGTGGC+AGG - chr7_2:34894619-34894638 None:intergenic 35.0%
ATCCATATATCAGACAAGGA+CGG - chr7_2:34894866-34894885 None:intergenic 35.0%
ATTTACCGCTTAAAACCAGA+TGG + chr7_2:34894926-34894945 Msa1056650:intron 35.0%
!!! CTAGTTTTAAGTGTCTGGTT+TGG - chr7_2:34894980-34894999 None:intergenic 35.0%
GAAAATCGCGAAACATTTAC+CGG + chr7_2:34895062-34895081 Msa1056650:CDS 35.0%
AAAATCGCGAAACATTTACC+GGG + chr7_2:34895063-34895082 Msa1056650:CDS 35.0%
ATGAGATAAAGAACTACTGG+AGG + chr7_2:34895097-34895116 Msa1056650:CDS 35.0%
AACTCTCAATCTCAAGAACA+AGG + chr7_2:34895153-34895172 Msa1056650:CDS 35.0%
GTTCAGCAATGTTGGAAATT+TGG - chr7_2:34895236-34895255 None:intergenic 35.0%
! GAGATAATATTGGTGTCCAT+AGG - chr7_2:34895258-34895277 None:intergenic 35.0%
TCCAAAATTCCTTGGTAAGA+GGG - chr7_2:34895285-34895304 None:intergenic 35.0%
TTCCAAAATTCCTTGGTAAG+AGG - chr7_2:34895286-34895305 None:intergenic 35.0%
GAAATGGTTCCAAAATTCCT+TGG - chr7_2:34895293-34895312 None:intergenic 35.0%
! AACTGATGATGAGTTGGAAA+TGG - chr7_2:34895309-34895328 None:intergenic 35.0%
CTTGATTGATCAGAGATTGT+AGG - chr7_2:34895333-34895352 None:intergenic 35.0%
TTGTCACTGCAACTACTAAA+TGG + chr7_2:34895384-34895403 Msa1056650:CDS 35.0%
ACAAGATCCTGATGTACGAA+AGG + chr7_2:34890225-34890244 Msa1056650:CDS 40.0%
CAAGATCCTGATGTACGAAA+GGG + chr7_2:34890226-34890245 Msa1056650:CDS 40.0%
AAGTCTTCTTCCATTGTCCA+TGG - chr7_2:34890253-34890272 None:intergenic 40.0%
ATTACCAGCAGATTTAGCCA+AGG - chr7_2:34890323-34890342 None:intergenic 40.0%
AAAGAATGACCTAGCTTGGT+AGG + chr7_2:34890493-34890512 Msa1056650:intron 40.0%
AAGAATGACCTAGCTTGGTA+GGG + chr7_2:34890494-34890513 Msa1056650:intron 40.0%
TTAAGAAACCCTACCAAGCT+AGG - chr7_2:34890505-34890524 None:intergenic 40.0%
ATATTCCCTCGTCTAACATC+AGG - chr7_2:34890628-34890647 None:intergenic 40.0%
ATGATCAAGAGTTGTTCCTC+AGG - chr7_2:34890655-34890674 None:intergenic 40.0%
! ATGAGCTTGTAGAGTACTCT+TGG + chr7_2:34890915-34890934 Msa1056650:intron 40.0%
! TGAATGTTGGTGAGGTTTGT+TGG + chr7_2:34891393-34891412 Msa1056650:intron 40.0%
! GAATGTTGGTGAGGTTTGTT+GGG + chr7_2:34891394-34891413 Msa1056650:intron 40.0%
AAACGGAGAAAGGAACACAA+GGG + chr7_2:34891443-34891462 Msa1056650:intron 40.0%
CGATCTGATCGAAAGTTTCA+CGG - chr7_2:34891697-34891716 None:intergenic 40.0%
GTAAAGAAGAAGGTCGTTCA+TGG + chr7_2:34891742-34891761 Msa1056650:intron 40.0%
ACAACATATCCATCGTGTTG+TGG - chr7_2:34891912-34891931 None:intergenic 40.0%
ACACGATGGATATGTTGTAG+AGG + chr7_2:34891914-34891933 Msa1056650:intron 40.0%
ACACCATATTGCAGTTGTAG+AGG - chr7_2:34892403-34892422 None:intergenic 40.0%
AACCTCAATGTCATGGTCAT+TGG + chr7_2:34892795-34892814 Msa1056650:intron 40.0%
ATCCAATGACCATGACATTG+AGG - chr7_2:34892800-34892819 None:intergenic 40.0%
! TGACCCTCTATTTTCCAACT+AGG + chr7_2:34893273-34893292 Msa1056650:intron 40.0%
GTGCCTAGTTGGAAAATAGA+GGG - chr7_2:34893279-34893298 None:intergenic 40.0%
TGTGCCTAGTTGGAAAATAG+AGG - chr7_2:34893280-34893299 None:intergenic 40.0%
ATACAAAACGTGTGCCTAGT+TGG - chr7_2:34893290-34893309 None:intergenic 40.0%
! ACTAGGCACACGTTTTGTAT+AGG + chr7_2:34893290-34893309 Msa1056650:intron 40.0%
AACCAAATGCTTTCTACCTG+TGG + chr7_2:34893587-34893606 Msa1056650:intron 40.0%
GTATCTGATTGAGAGGTTTG+AGG - chr7_2:34893785-34893804 None:intergenic 40.0%
TCAATCAGATACACTGCCAT+TGG + chr7_2:34893793-34893812 Msa1056650:intron 40.0%
AACCAAATAAACTGATGCGG+AGG - chr7_2:34893871-34893890 None:intergenic 40.0%
! TCTTTTTCTCCAAGAACTGG+AGG + chr7_2:34894070-34894089 Msa1056650:intron 40.0%
! CTTTTTCTCCAAGAACTGGA+GGG + chr7_2:34894071-34894090 Msa1056650:intron 40.0%
!! AATTGGTTCAAGTTGAACCG+GGG - chr7_2:34894206-34894225 None:intergenic 40.0%
! CCGGATTTGGTTCAACTAAT+TGG - chr7_2:34894223-34894242 None:intergenic 40.0%
AGTGTTGTCAAAACCGGATT+TGG - chr7_2:34894236-34894255 None:intergenic 40.0%
CGTAGTGTAATCTTAGTGCA+AGG - chr7_2:34894299-34894318 None:intergenic 40.0%
! AGGGGCATGGTTATAAATTG+AGG - chr7_2:34894377-34894396 None:intergenic 40.0%
TGTGTGCAGTGAGAAAAGTA+AGG - chr7_2:34894572-34894591 None:intergenic 40.0%
TATGTCAACTTGTGCCATCA+GGG - chr7_2:34894684-34894703 None:intergenic 40.0%
TTATGTCAACTTGTGCCATC+AGG - chr7_2:34894685-34894704 None:intergenic 40.0%
AACCGTCCTTGTCTGATATA+TGG + chr7_2:34894861-34894880 Msa1056650:intron 40.0%
TAATCATTCACCAATGCAGG+TGG + chr7_2:34895037-34895056 Msa1056650:intron 40.0%
AAATCGCGAAACATTTACCG+GGG + chr7_2:34895064-34895083 Msa1056650:CDS 40.0%
TAAAGAACTACTGGAGGACA+AGG + chr7_2:34895103-34895122 Msa1056650:CDS 40.0%
!! CAGCTTGCTTGATATGCTTT+TGG - chr7_2:34895131-34895150 None:intergenic 40.0%
TTCCAACATTGCTGAACCTA+TGG + chr7_2:34895239-34895258 Msa1056650:CDS 40.0%
AGAGGGTGGTGAGATAATAT+TGG - chr7_2:34895268-34895287 None:intergenic 40.0%
AAAATTCCTTGGTAAGAGGG+TGG - chr7_2:34895282-34895301 None:intergenic 40.0%
! ACCCTCTTACCAAGGAATTT+TGG + chr7_2:34895281-34895300 Msa1056650:CDS 40.0%
TTGTTCTAACTACTGGAGCA+TGG + chr7_2:34895353-34895372 Msa1056650:CDS 40.0%
CCAAACACCTTCACCATGAT+TGG - chr7_2:34890296-34890315 None:intergenic 45.0%
!! CCAATCATGGTGAAGGTGTT+TGG + chr7_2:34890293-34890312 Msa1056650:CDS 45.0%
!! TGAAGGTGTTTGGAACTCCT+TGG + chr7_2:34890303-34890322 Msa1056650:CDS 45.0%
AACTCCTTGGCTAAATCTGC+TGG + chr7_2:34890316-34890335 Msa1056650:CDS 45.0%
TTCGACCTGATGTTAGACGA+GGG + chr7_2:34890620-34890639 Msa1056650:CDS 45.0%
ACGAGGGAATATTACACCTG+AGG + chr7_2:34890636-34890655 Msa1056650:CDS 45.0%
TTCATGCTAAGTGGGGAAAC+AGG + chr7_2:34890680-34890699 Msa1056650:CDS 45.0%
CAAACGGAGAAAGGAACACA+AGG + chr7_2:34891442-34891461 Msa1056650:intron 45.0%
AACGGAGAAAGGAACACAAG+GGG + chr7_2:34891444-34891463 Msa1056650:intron 45.0%
AGCCAAAATATAGGGTCGGT+AGG + chr7_2:34892003-34892022 Msa1056650:intron 45.0%
! CTCCTACCGACCCTATATTT+TGG - chr7_2:34892008-34892027 None:intergenic 45.0%
GTACTCGGTTCTCGTTTACA+TGG - chr7_2:34892748-34892767 None:intergenic 45.0%
TTTGAGAAAGGTAGTCAGGG+TGG - chr7_2:34893051-34893070 None:intergenic 45.0%
!! TGCCACAGGTAGAAAGCATT+TGG - chr7_2:34893592-34893611 None:intergenic 45.0%
GATTTCTCAATGCATGCCAC+AGG - chr7_2:34893606-34893625 None:intergenic 45.0%
! AGGTTTGAGGCCATGTTCAA+CGG - chr7_2:34893772-34893791 None:intergenic 45.0%
TGGCAGTGTATCTGATTGAG+AGG - chr7_2:34893792-34893811 None:intergenic 45.0%
GACCTCCGCATCAGTTTATT+TGG + chr7_2:34893866-34893885 Msa1056650:intron 45.0%
TGGTTCAATCGGTTGAACTG+TGG + chr7_2:34893886-34893905 Msa1056650:intron 45.0%
! GGGTCTTTTTCTCCAAGAAC+TGG + chr7_2:34894067-34894086 Msa1056650:intron 45.0%
AAGAAATTGTAGCAGGGGCA+TGG - chr7_2:34894390-34894409 None:intergenic 45.0%
!! ATCTCATTATCGGTTCTCCC+CGG - chr7_2:34895084-34895103 None:intergenic 45.0%
GTCCATAGGTTCAGCAATGT+TGG - chr7_2:34895244-34895263 None:intergenic 45.0%
! GTAGGGAACTGATGATGAGT+TGG - chr7_2:34895315-34895334 None:intergenic 45.0%
!! AGTTAATTAAATAATAATAA+AGG + chr7_2:34890381-34890400 Msa1056650:intron 5.0%
!!! AAAAATAGTTATTTTTAATA+TGG - chr7_2:34893114-34893133 None:intergenic 5.0%
!!! ATTAAAAATAACTATTTTTA+TGG + chr7_2:34893115-34893134 Msa1056650:intron 5.0%
!!! TTTATTTTTTTTATAAGAAA+AGG - chr7_2:34893332-34893351 None:intergenic 5.0%
!! AAAATAAAATAAAATAAAAG+GGG + chr7_2:34893492-34893511 Msa1056650:intron 5.0%
CATGGTCCCTTTCGTACATC+AGG - chr7_2:34890235-34890254 None:intergenic 50.0%
CTGATGTACGAAAGGGACCA+TGG + chr7_2:34890233-34890252 Msa1056650:CDS 50.0%
ACGAAAGGGACCATGGACAA+TGG + chr7_2:34890240-34890259 Msa1056650:CDS 50.0%
AACGTACCGGAAAGAGTTGC+AGG + chr7_2:34890578-34890597 Msa1056650:CDS 50.0%
CTTCGACCTGATGTTAGACG+AGG + chr7_2:34890619-34890638 Msa1056650:CDS 50.0%
! GGGGTGCTCCAACACTTTAA+AGG + chr7_2:34891463-34891482 Msa1056650:intron 50.0%
CCATCGTGTTGTGGTTGTAG+AGG - chr7_2:34891903-34891922 None:intergenic 50.0%
CCTCTACAACCACAACACGA+TGG + chr7_2:34891900-34891919 Msa1056650:intron 50.0%
!! GGCTTTAGAAGCGACATGCA+AGG - chr7_2:34891987-34892006 None:intergenic 50.0%
!!! TTTTGAAGTATGGTGGGGGG+TGG - chr7_2:34892492-34892511 None:intergenic 50.0%
AGAGCGCAACCTCAATGTCA+TGG + chr7_2:34892788-34892807 Msa1056650:intron 50.0%
!! TTCAAGTTGAACCGGGGAAC+CGG - chr7_2:34894200-34894219 None:intergenic 50.0%
GGGGGTAGTGTTGTCAAAAC+CGG - chr7_2:34894242-34894261 None:intergenic 50.0%
GAATGTGGCAGGGTTTGTGA+TGG - chr7_2:34894608-34894627 None:intergenic 50.0%
! CGATTTTCGACCACCTGCAT+TGG - chr7_2:34895050-34895069 None:intergenic 50.0%
ATCTCACCACCCTCTTACCA+AGG + chr7_2:34895273-34895292 Msa1056650:CDS 50.0%
CCGAAGCCTGCAACTCTTTC+CGG - chr7_2:34890587-34890606 None:intergenic 55.0%
CCGGAAAGAGTTGCAGGCTT+CGG + chr7_2:34890584-34890603 Msa1056650:CDS 55.0%
GAAAGAGTTGCAGGCTTCGG+TGG + chr7_2:34890587-34890606 Msa1056650:CDS 55.0%
AGGAACAAGGACGCCCTATG+AGG - chr7_2:34893024-34893043 None:intergenic 55.0%
TCAGGGTGGAGCAAGGAACA+AGG - chr7_2:34893037-34893056 None:intergenic 55.0%
AAGGTAGTCAGGGTGGAGCA+AGG - chr7_2:34893044-34893063 None:intergenic 55.0%
!! CGGGGAACCGGCTAGTTTAT+CGG - chr7_2:34894188-34894207 None:intergenic 55.0%
! CGATAAACTAGCCGGTTCCC+CGG + chr7_2:34894186-34894205 Msa1056650:intron 55.0%
GTGGGGGGTGAGAACTCTAG+TGG - chr7_2:34892460-34892479 None:intergenic 60.0%
! TGAAGTATGGTGGGGGGTGG+TGG - chr7_2:34892489-34892508 None:intergenic 60.0%
! GTATGGTGGGGGGTGGTGGT+GGG - chr7_2:34892485-34892504 None:intergenic 65.0%
! AGTATGGTGGGGGGTGGTGG+TGG - chr7_2:34892486-34892505 None:intergenic 65.0%
!! GGGTGGTGGTGGGAGGTGGG+GGG - chr7_2:34892475-34892494 None:intergenic 75.0%
!! GGGGTGGTGGTGGGAGGTGG+GGG - chr7_2:34892476-34892495 None:intergenic 75.0%
!! GGGGGTGGTGGTGGGAGGTG+GGG - chr7_2:34892477-34892496 None:intergenic 75.0%
!! GGGGGGTGGTGGTGGGAGGT+GGG - chr7_2:34892478-34892497 None:intergenic 75.0%
!! TGGGGGGTGGTGGTGGGAGG+TGG - chr7_2:34892479-34892498 None:intergenic 75.0%
!! TGGTGGGGGGTGGTGGTGGG+AGG - chr7_2:34892482-34892501 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 34890199 34895413 34890199 ID=Msa1056650;Name=Msa1056650
chr7_2 mRNA 34890199 34895413 34890199 ID=Msa1056650-mRNA-1;Parent=Msa1056650;Name=Msa1056650-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|3|0|208
chr7_2 exon 34890199 34890337 34890199 ID=Msa1056650-mRNA-1:exon:6849;Parent=Msa1056650-mRNA-1
chr7_2 exon 34890572 34890701 34890572 ID=Msa1056650-mRNA-1:exon:6850;Parent=Msa1056650-mRNA-1
chr7_2 exon 34895056 34895413 34895056 ID=Msa1056650-mRNA-1:exon:6851;Parent=Msa1056650-mRNA-1
chr7_2 CDS 34890199 34890337 34890199 ID=Msa1056650-mRNA-1:cds;Parent=Msa1056650-mRNA-1
chr7_2 CDS 34890572 34890701 34890572 ID=Msa1056650-mRNA-1:cds;Parent=Msa1056650-mRNA-1
chr7_2 CDS 34895056 34895413 34895056 ID=Msa1056650-mRNA-1:cds;Parent=Msa1056650-mRNA-1
Gene Sequence

>Msa1056650

ATGGACAAAAAAGAGTGCAGTTCTTCACAAGATCCTGATGTACGAAAGGGACCATGGACAATGGAAGAAGACTTGATCTTGATCAACTATATTGCCAATCATGGTGAAGGTGTTTGGAACTCCTTGGCTAAATCTGCTGGTCTTAAACGTACCGGAAAGAGTTGCAGGCTTCGGTGGCTAAACTATCTTCGACCTGATGTTAGACGAGGGAATATTACACCTGAGGAACAACTCTTGATCATTGAACTTCATGCTAAGTGGGGAAACAGGTGGTCGAAAATCGCGAAACATTTACCGGGGAGAACCGATAATGAGATAAAGAACTACTGGAGGACAAGGATCCAAAAGCATATCAAGCAAGCTGAGAACTCTCAATCTCAAGAACAAGGTTCTGATATTCAAATAAATGATGATAATAATAATAATCAATGTATAGGAAGCACAAGCCAAATTTCCAACATTGCTGAACCTATGGACACCAATATTATCTCACCACCCTCTTACCAAGGAATTTTGGAACCATTTCCAACTCATCATCAGTTCCCTACAATCTCTGATCAATCAAGTTGTTCTAACTACTGGAGCATGGAAGATCTCTTGTCACTGCAACTACTAAATGGTGATTAA
Protein sequence

>Msa1056650

MDKKECSSSQDPDVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIIELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQAENSQSQEQGSDIQINDDNNNNQCIGSTSQISNIAEPMDTNIISPPSYQGILEPFPTHHQFPTISDQSSCSNYWSMEDLLSLQLLNGD*