AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1057180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 18 sgRNAs with CRISPR-Local

Find 716 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGCTTTGAACATCGATAAA+AGG 0.265100 7_2:-37336882 Msa1057180:CDS
GTGCTTTGAACGTCCATAAA+AGG 0.285913 7_2:-37328704 Msa1057180:CDS
TCCCAAGTCCTTCGAAAGTA+AGG 0.352920 7_2:-37328727 Msa1057180:intron
TCCCAAGTCCTTCGAAAGTA+AGG 0.396127 7_2:-37336905 Msa1057180:CDS
GTGGTTGACATGTCTTCATA+TGG 0.455172 7_2:+37328610 None:intergenic
GTGGTTGACATGTCTTCATA+TGG 0.455172 7_2:+37336788 None:intergenic
ACCCTTACTTTCGAAGGACT+TGG 0.470340 7_2:+37336903 None:intergenic
CCCTTACTTTCGAAGGACTT+GGG 0.477508 7_2:+37336904 None:intergenic
CAAAGCACCCTTACTTTCGA+AGG 0.524991 7_2:+37328719 None:intergenic
CAAAGCACCCTTACTTTCGA+AGG 0.524991 7_2:+37336897 None:intergenic
CCCAAGTCCTTCGAAAGTAA+GGG 0.536718 7_2:-37328726 Msa1057180:intron
AGAATTCTTCAAATTCATTG+AGG 0.542733 7_2:+37328567 None:intergenic
TTATGTACTTGCATCTTCTG+TGG 0.555287 7_2:+37328591 None:intergenic
TTATGTACTTGCATCTTCTG+TGG 0.555287 7_2:+37336769 None:intergenic
CCCAAGTCCTTCGAAAGTAA+GGG 0.608380 7_2:-37336904 Msa1057180:CDS
TGGGACAATCAAAGCAAGCG+TGG 0.684170 7_2:+37336923 None:intergenic
AAAACACGTTGCGATAGATG+TGG 0.685090 7_2:-37328666 Msa1057180:CDS
AAAACACGTTGCGATAGATG+TGG 0.685090 7_2:-37336844 Msa1057180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATATATATTTAATAT+GGG + chr7_2:37330152-37330171 None:intergenic 0.0%
!! AAAAATATATATATTTAATA+TGG + chr7_2:37330153-37330172 None:intergenic 0.0%
!! TATATATATATATATAATAT+GGG + chr7_2:37336162-37336181 None:intergenic 0.0%
!! ATATATATATATATATAATA+TGG + chr7_2:37336163-37336182 None:intergenic 0.0%
!!! TTAATTTTAGTTAAATTTCT+TGG - chr7_2:37328964-37328983 Msa1057180:intron 10.0%
!! ATAAAATTATAAACTCAAAA+TGG - chr7_2:37329281-37329300 Msa1057180:intron 10.0%
!!! TTATTAATTGAATATTTTAC+TGG - chr7_2:37329313-37329332 Msa1057180:intron 10.0%
!!! TTTCTATTTAGAATATTTTT+AGG - chr7_2:37329461-37329480 Msa1057180:intron 10.0%
!! AATATATTTGCATTTAAATT+CGG - chr7_2:37333007-37333026 Msa1057180:intron 10.0%
!! TATTATTTATTGGAATATTA+GGG + chr7_2:37334444-37334463 None:intergenic 10.0%
!! TTATTATTTATTGGAATATT+AGG + chr7_2:37334445-37334464 None:intergenic 10.0%
!! AATTCTATTAAATCATATTT+AGG - chr7_2:37336292-37336311 Msa1057180:intron 10.0%
!! ATTCTATTAAATCATATTTA+GGG - chr7_2:37336293-37336312 Msa1057180:intron 10.0%
!! ATATACTATAAACTGAAATA+TGG + chr7_2:37328815-37328834 None:intergenic 15.0%
!!! ATGAGTTTTTTTTTTCAAAA+GGG + chr7_2:37329394-37329413 None:intergenic 15.0%
!!! TATGAGTTTTTTTTTTCAAA+AGG + chr7_2:37329395-37329414 None:intergenic 15.0%
!!! TCTTTATTTATTTTCAATTG+AGG - chr7_2:37329490-37329509 Msa1057180:intron 15.0%
!!! CTTTATTTATTTTCAATTGA+GGG - chr7_2:37329491-37329510 Msa1057180:intron 15.0%
!! TTATGTATAAAAAGAAAATG+AGG - chr7_2:37329554-37329573 Msa1057180:intron 15.0%
!! TATGTATAAAAAGAAAATGA+GGG - chr7_2:37329555-37329574 Msa1057180:intron 15.0%
!! TCATAAATATTGTTAAAGAA+AGG - chr7_2:37329743-37329762 Msa1057180:intron 15.0%
!!! TTTTAATAAAATTTCCGTAT+TGG + chr7_2:37330273-37330292 None:intergenic 15.0%
!!! TTTTTCTTTTTCTATTTCTT+TGG + chr7_2:37330344-37330363 None:intergenic 15.0%
!! GAAAAATAAACAAAATACTA+TGG - chr7_2:37330358-37330377 Msa1057180:intron 15.0%
!! GAATTTAAATGCAAATATAT+TGG + chr7_2:37333008-37333027 None:intergenic 15.0%
!! TTAAATGAATGTGTTAATAA+TGG + chr7_2:37333259-37333278 None:intergenic 15.0%
!! ATTATTTATTGGAATATTAG+GGG + chr7_2:37334443-37334462 None:intergenic 15.0%
!! AATTCTCCAAGAATATATAT+TGG - chr7_2:37328781-37328800 Msa1057180:intron 20.0%
!! TATTATAATTCTTGCATGTA+TGG - chr7_2:37328920-37328939 Msa1057180:intron 20.0%
!!! TTTTAATTATGTATGAGAGT+AGG - chr7_2:37329006-37329025 Msa1057180:intron 20.0%
!!! TATATGTGATGCTAAATTTT+AGG + chr7_2:37330126-37330145 None:intergenic 20.0%
!!! ATTTAGGGAAATCTAAAATT+CGG - chr7_2:37330388-37330407 Msa1057180:intron 20.0%
!! AAGTAATAATGCATCATTTA+TGG - chr7_2:37331881-37331900 Msa1057180:intron 20.0%
!! GACAAAAGTAAATTATATAC+TGG + chr7_2:37332311-37332330 None:intergenic 20.0%
!!! GACAATTTTGAATTGAAAAT+TGG - chr7_2:37332922-37332941 Msa1057180:intron 20.0%
!! AGTATAAAAAAATTCCTGAA+CGG - chr7_2:37333042-37333061 Msa1057180:intron 20.0%
!!! AATTATCTTCAGGATATTTT+TGG + chr7_2:37333286-37333305 None:intergenic 20.0%
!! AGAAATCAAAGTTTCATTTA+CGG + chr7_2:37333433-37333452 None:intergenic 20.0%
!!! CTTTCAAATTTTTTAAGACT+TGG + chr7_2:37333759-37333778 None:intergenic 20.0%
!! TAATTACTGTCTGAATAATA+GGG + chr7_2:37334285-37334304 None:intergenic 20.0%
!! AATAATAATGATTTAAACGG+TGG - chr7_2:37334457-37334476 Msa1057180:intron 20.0%
!! ATAATAATGATTTAAACGGT+GGG - chr7_2:37334458-37334477 Msa1057180:intron 20.0%
!!! TATATGTGATGCTAAATTTT+AGG + chr7_2:37330126-37330145 None:intergenic 20.0%
! AGAATTCTTCAAATTCATTG+AGG + chr7_2:37328767-37328786 None:intergenic 25.0%
! TGTTCTCCAATATATATTCT+TGG + chr7_2:37328790-37328809 None:intergenic 25.0%
!! TTTGTCGACTATATATTCTT+AGG - chr7_2:37328883-37328902 Msa1057180:intron 25.0%
! ATTGACAACATATTAGAGTA+GGG + chr7_2:37329720-37329739 None:intergenic 25.0%
! AATTGACAACATATTAGAGT+AGG + chr7_2:37329721-37329740 None:intergenic 25.0%
! ATAAAATTTCCGTATTGGAA+AGG + chr7_2:37330268-37330287 None:intergenic 25.0%
!!! TCTTTTTCTATTTCTTTGGA+GGG + chr7_2:37330340-37330359 None:intergenic 25.0%
!!! TTCTTTTTCTATTTCTTTGG+AGG + chr7_2:37330341-37330360 None:intergenic 25.0%
! ATACTATGGAACAAACATTT+AGG - chr7_2:37330372-37330391 Msa1057180:intron 25.0%
! TACTATGGAACAAACATTTA+GGG - chr7_2:37330373-37330392 Msa1057180:intron 25.0%
!!! ATCTTTGAAGCTGAAATTTT+GGG + chr7_2:37330715-37330734 None:intergenic 25.0%
!!! TATCTTTGAAGCTGAAATTT+TGG + chr7_2:37330716-37330735 None:intergenic 25.0%
! ATTTGCAAGTAATATTGGTA+TGG + chr7_2:37330743-37330762 None:intergenic 25.0%
!!! ACTTTCAGATGTTGTTATTT+TGG + chr7_2:37330935-37330954 None:intergenic 25.0%
!! AAATAAATGAGTTGAGGATT+CGG - chr7_2:37331239-37331258 Msa1057180:intron 25.0%
! AGATGAAAATTTACAGTCAA+GGG + chr7_2:37331307-37331326 None:intergenic 25.0%
!! ATAATTTTTGCTGCTACTAA+CGG - chr7_2:37331531-37331550 Msa1057180:intron 25.0%
! TTATGGTTTGAAAATTGGAT+GGG + chr7_2:37331675-37331694 None:intergenic 25.0%
! TTCAGTTATGGTTTGAAAAT+TGG + chr7_2:37331680-37331699 None:intergenic 25.0%
! TCAAATCTTCTATTTGGTTA+GGG + chr7_2:37331767-37331786 None:intergenic 25.0%
! TTCAAATCTTCTATTTGGTT+AGG + chr7_2:37331768-37331787 None:intergenic 25.0%
!! GCTATTTCAAATCTTCTATT+TGG + chr7_2:37331773-37331792 None:intergenic 25.0%
!! TTAAAAACTTTGTTTGGAGT+GGG + chr7_2:37331998-37332017 None:intergenic 25.0%
!! ATTAAAAACTTTGTTTGGAG+TGG + chr7_2:37331999-37332018 None:intergenic 25.0%
! ATTCATTCCATATTTATCGA+TGG + chr7_2:37332055-37332074 None:intergenic 25.0%
! GCATATTATTGACAGAATTA+AGG + chr7_2:37332165-37332184 None:intergenic 25.0%
! TAATTCTGTCAATAATATGC+TGG - chr7_2:37332165-37332184 Msa1057180:intron 25.0%
! TTACACAATCAGAAATATGA+CGG - chr7_2:37332822-37332841 Msa1057180:intron 25.0%
!!! GTTCAGGAATTTTTTTATAC+TGG + chr7_2:37333043-37333062 None:intergenic 25.0%
!! ACATTTTTACCAACACTTTT+GGG + chr7_2:37333095-37333114 None:intergenic 25.0%
! TGAGAATAATAATGTGTTGA+CGG + chr7_2:37333200-37333219 None:intergenic 25.0%
! TTATTCTCAATAGTAACCAT+CGG - chr7_2:37333211-37333230 Msa1057180:intron 25.0%
! TGAATGTGTTAATAATGGTT+TGG + chr7_2:37333254-37333273 None:intergenic 25.0%
!!! TAAGCCTATTTCTCTTTTAA+TGG + chr7_2:37333359-37333378 None:intergenic 25.0%
!!! TTTTAAAGTTTGGAATAGGT+CGG + chr7_2:37333629-37333648 None:intergenic 25.0%
!!! ATGCTTTTAAAGTTTGGAAT+AGG + chr7_2:37333633-37333652 None:intergenic 25.0%
!!! TTAAGGATGCTTTTAAAGTT+TGG + chr7_2:37333639-37333658 None:intergenic 25.0%
!!! TTCCAAATTTTCAAGAGTAA+CGG - chr7_2:37333712-37333731 Msa1057180:intron 25.0%
! TGTTGCATTTGAATACTAAT+GGG + chr7_2:37333972-37333991 None:intergenic 25.0%
! TTGTTGCATTTGAATACTAA+TGG + chr7_2:37333973-37333992 None:intergenic 25.0%
! CTAATTACTGTCTGAATAAT+AGG + chr7_2:37334286-37334305 None:intergenic 25.0%
! GAAAACATTAAGTATGCAAA+AGG + chr7_2:37334515-37334534 None:intergenic 25.0%
!! TTTGAGACTACATCAATAAA+AGG - chr7_2:37334547-37334566 Msa1057180:intron 25.0%
! ACATAAACTTTATGCAAGAT+TGG + chr7_2:37334603-37334622 None:intergenic 25.0%
!!! TGACATCTAAAGTTTTATCA+CGG - chr7_2:37334674-37334693 Msa1057180:intron 25.0%
! TGATGATATTGTTAGAAATG+AGG + chr7_2:37334731-37334750 None:intergenic 25.0%
! TCATCAGATGCATTAATTAA+TGG - chr7_2:37334745-37334764 Msa1057180:intron 25.0%
! TCAATATCCTTTGTAGTATA+AGG - chr7_2:37335816-37335835 Msa1057180:intron 25.0%
!! ATTTTTGCAAGACTAATTTG+CGG + chr7_2:37335872-37335891 None:intergenic 25.0%
! GCAACAAAAACTATGAAATA+AGG - chr7_2:37336553-37336572 Msa1057180:intron 25.0%
! TTATTCAACAGTATATCCAT+GGG + chr7_2:37336615-37336634 None:intergenic 25.0%
! ATTATTCAACAGTATATCCA+TGG + chr7_2:37336616-37336635 None:intergenic 25.0%
AGGATGAAATATTCTCTTAG+AGG - chr7_2:37329026-37329045 Msa1057180:intron 30.0%
TAGTTTATTATTCCTAGCTC+CGG - chr7_2:37329112-37329131 Msa1057180:intron 30.0%
! AAATTAGTTGACTCTTGAAC+TGG + chr7_2:37330027-37330046 None:intergenic 30.0%
AATTCCATTGTCTACTTGTA+GGG - chr7_2:37330056-37330075 Msa1057180:intron 30.0%
!!! AGCTAAGTTTTGGGTTTAAA+TGG + chr7_2:37330085-37330104 None:intergenic 30.0%
!! TGTGATGCTAAATTTTAGGT+GGG + chr7_2:37330122-37330141 None:intergenic 30.0%
! ATGTGATGCTAAATTTTAGG+TGG + chr7_2:37330123-37330142 None:intergenic 30.0%
AGGAGAAAAAATGTACAAAG+AGG - chr7_2:37330298-37330317 Msa1057180:intron 30.0%
GGAGAAAAAATGTACAAAGA+GGG - chr7_2:37330299-37330318 Msa1057180:intron 30.0%
GAGAAAAAATGTACAAAGAG+GGG - chr7_2:37330300-37330319 Msa1057180:intron 30.0%
AGAAAAAATGTACAAAGAGG+GGG - chr7_2:37330301-37330320 Msa1057180:intron 30.0%
TTCCAGAAATAAATGAGTTG+AGG - chr7_2:37331233-37331252 Msa1057180:intron 30.0%
ATCCTCAACTCATTTATTTC+TGG + chr7_2:37331238-37331257 None:intergenic 30.0%
GATGAAAATTTACAGTCAAG+GGG + chr7_2:37331306-37331325 None:intergenic 30.0%
CAGATGAAAATTTACAGTCA+AGG + chr7_2:37331308-37331327 None:intergenic 30.0%
! GACTGTAAATTTTCATCTGT+TGG - chr7_2:37331309-37331328 Msa1057180:intron 30.0%
!! AAATTGGAAAGCCATTTTAG+AGG - chr7_2:37331437-37331456 Msa1057180:intron 30.0%
! TTGTTATTGCTGATGGTAAA+TGG + chr7_2:37331584-37331603 None:intergenic 30.0%
!!! CTTTCTTTTGTTATTGCTGA+TGG + chr7_2:37331591-37331610 None:intergenic 30.0%
GTTATGGTTTGAAAATTGGA+TGG + chr7_2:37331676-37331695 None:intergenic 30.0%
GGTGAAAGATAAATTCTCTA+TGG + chr7_2:37331745-37331764 None:intergenic 30.0%
CAAATCTTCTATTTGGTTAG+GGG + chr7_2:37331766-37331785 None:intergenic 30.0%
! GCAAAATTTGTACTGTTTCT+TGG + chr7_2:37331962-37331981 None:intergenic 30.0%
! TAAAAACTTTGTTTGGAGTG+GGG + chr7_2:37331997-37332016 None:intergenic 30.0%
!! GGTGGATTAAAAACTTTGTT+TGG + chr7_2:37332004-37332023 None:intergenic 30.0%
! GTTTGTTGAAAATGCTTGAT+AGG + chr7_2:37332025-37332044 None:intergenic 30.0%
TCTATTCCGTTTCAATATCT+TGG + chr7_2:37332230-37332249 None:intergenic 30.0%
AAATATGCTTGCTCATCTTT+CGG + chr7_2:37332267-37332286 None:intergenic 30.0%
! AGTTTTTCATGAATACTCAG+AGG + chr7_2:37332357-37332376 None:intergenic 30.0%
TTCCGCAAGACAAAATAAAA+GGG - chr7_2:37332535-37332554 Msa1057180:intron 30.0%
CAAAATAAAAGGGGAGATAA+AGG - chr7_2:37332545-37332564 Msa1057180:intron 30.0%
!!! TCAGCAATTTATTTTGTGAC+TGG + chr7_2:37332667-37332686 None:intergenic 30.0%
!! AGATTGGAAGTTTTTGATTG+CGG + chr7_2:37332708-37332727 None:intergenic 30.0%
! GACATTTTTACCAACACTTT+TGG + chr7_2:37333096-37333115 None:intergenic 30.0%
!! CCTATTTCTCTTTTAATGGA+TGG + chr7_2:37333355-37333374 None:intergenic 30.0%
CCATCCATTAAAAGAGAAAT+AGG - chr7_2:37333352-37333371 Msa1057180:intron 30.0%
! GGTGAAAGTATACTGTATTA+CGG - chr7_2:37333404-37333423 Msa1057180:intron 30.0%
! CTTGAAAATTTGGAACAAAC+AGG + chr7_2:37333707-37333726 None:intergenic 30.0%
TCATCCTCTATTAATTCATG+CGG + chr7_2:37333809-37333828 None:intergenic 30.0%
AATTTACTTGGAATAATGGC+AGG + chr7_2:37333945-37333964 None:intergenic 30.0%
GTGCAATTTACTTGGAATAA+TGG + chr7_2:37333949-37333968 None:intergenic 30.0%
GTTGCATTTGAATACTAATG+GGG + chr7_2:37333971-37333990 None:intergenic 30.0%
TAGTATTCAAATGCAACAAC+AGG - chr7_2:37333974-37333993 Msa1057180:intron 30.0%
AAGTCATTACAAGATAACGA+AGG - chr7_2:37334018-37334037 Msa1057180:intron 30.0%
AAATCACCCAAAAAAATCCA+AGG - chr7_2:37334087-37334106 Msa1057180:intron 30.0%
TAGGCTCCAAAATTCTTTAA+GGG + chr7_2:37334115-37334134 None:intergenic 30.0%
! CATTTTACGGAGAAATCTTT+GGG + chr7_2:37334148-37334167 None:intergenic 30.0%
! ACATTTTACGGAGAAATCTT+TGG + chr7_2:37334149-37334168 None:intergenic 30.0%
! CTAGCACTTCTTACATTTTA+CGG + chr7_2:37334161-37334180 None:intergenic 30.0%
TAATGTGATTATACTTGCAG+AGG + chr7_2:37334213-37334232 None:intergenic 30.0%
AAATTTCTCCAAAACCAAGA+AGG - chr7_2:37334314-37334333 Msa1057180:intron 30.0%
! TTGTATTTGCTGATATGTGT+CGG + chr7_2:37334397-37334416 None:intergenic 30.0%
TATTGGAATATTAGGGGAAT+CGG + chr7_2:37334437-37334456 None:intergenic 30.0%
!!! TTTATGTCATTTTGTACCAC+TGG - chr7_2:37334616-37334635 Msa1057180:intron 30.0%
GTTCTTATTACTACAACAGT+TGG + chr7_2:37334775-37334794 None:intergenic 30.0%
ACTGTTGTAGTAATAAGAAC+AGG - chr7_2:37334775-37334794 Msa1057180:intron 30.0%
TGCTTCTTTGAATATTACAG+AGG + chr7_2:37334839-37334858 None:intergenic 30.0%
AATTCCTCAAAAGAATTTGG+AGG + chr7_2:37335133-37335152 None:intergenic 30.0%
GGAAATTCCTCAAAAGAATT+TGG + chr7_2:37335136-37335155 None:intergenic 30.0%
! AACCCAATTTTCTTTCGTAA+CGG - chr7_2:37335230-37335249 Msa1057180:intron 30.0%
!! AAAATTACAGAAGCTTTGGA+AGG + chr7_2:37335793-37335812 None:intergenic 30.0%
AGTCAAAATTACAGAAGCTT+TGG + chr7_2:37335797-37335816 None:intergenic 30.0%
AGACAAACCTTATACTACAA+AGG + chr7_2:37335826-37335845 None:intergenic 30.0%
!! TTTTTGCAAGACTAATTTGC+GGG + chr7_2:37335871-37335890 None:intergenic 30.0%
! TTTTCCCATTCCCTATATTA+GGG + chr7_2:37335946-37335965 None:intergenic 30.0%
! ATTTTCCCATTCCCTATATT+AGG + chr7_2:37335947-37335966 None:intergenic 30.0%
!!! AGCTAAGTTTTGGGTTTAAA+TGG + chr7_2:37330085-37330104 None:intergenic 30.0%
!! TGTGATGCTAAATTTTAGGT+GGG + chr7_2:37330122-37330141 None:intergenic 30.0%
! ATGTGATGCTAAATTTTAGG+TGG + chr7_2:37330123-37330142 None:intergenic 30.0%
!! TAAATTTTGTTGTGAACCCA+TGG - chr7_2:37336596-37336615 Msa1057180:intron 30.0%
! CTTCACATTCAAACCTTTTA+TGG + chr7_2:37328643-37328662 None:intergenic 30.0%
! GTGCTTTGAACATCGATAAA+AGG - chr7_2:37328627-37328646 Msa1057180:CDS 35.0%
TTATGTACTTGCATCTTCTG+TGG + chr7_2:37328743-37328762 None:intergenic 35.0%
GACGTAATTAATAGCTTACG+AGG - chr7_2:37329209-37329228 Msa1057180:intron 35.0%
!!! TTTGGATGTCATTTTGCTCT+TGG + chr7_2:37329672-37329691 None:intergenic 35.0%
! GTAGTTGGACACTATTCTTT+TGG + chr7_2:37329690-37329709 None:intergenic 35.0%
CTACAAGTAGACAATGGAAT+TGG + chr7_2:37330057-37330076 None:intergenic 35.0%
CAATTCCATTGTCTACTTGT+AGG - chr7_2:37330055-37330074 Msa1057180:intron 35.0%
! TCCATACAGAGCTAAGTTTT+GGG + chr7_2:37330094-37330113 None:intergenic 35.0%
! TTTTGATAAGGCCAAGAGAA+AGG - chr7_2:37330172-37330191 Msa1057180:intron 35.0%
AAATTTCCGTATTGGAAAGG+CGG + chr7_2:37330265-37330284 None:intergenic 35.0%
GAAAAAATGTACAAAGAGGG+GGG - chr7_2:37330302-37330321 Msa1057180:intron 35.0%
! TCTATTTCTTTGGAGGGTAT+TGG + chr7_2:37330334-37330353 None:intergenic 35.0%
ATGATATTCATGACACGGTT+TGG + chr7_2:37330471-37330490 None:intergenic 35.0%
TCATTTGTTCGCATATCTTC+CGG + chr7_2:37330534-37330553 None:intergenic 35.0%
TTGTATAACAGTTATGCCAC+CGG - chr7_2:37330566-37330585 Msa1057180:intron 35.0%
AATCGAACAGGAATAAGAGA+AGG - chr7_2:37330595-37330614 Msa1057180:intron 35.0%
AATAAGAGAAGGCTTATGGA+AGG - chr7_2:37330606-37330625 Msa1057180:intron 35.0%
CATCATGGCTATAGAATATG+CGG + chr7_2:37330689-37330708 None:intergenic 35.0%
!!! TGAAATTTTGGGACTCATCA+TGG + chr7_2:37330704-37330723 None:intergenic 35.0%
! GGTGGATTTGCAAGTAATAT+TGG + chr7_2:37330748-37330767 None:intergenic 35.0%
AGAAATTTGATGTCTGCTTG+CGG + chr7_2:37330805-37330824 None:intergenic 35.0%
! ATTTTCATCTGTTGGAAGCT+TGG - chr7_2:37331317-37331336 Msa1057180:intron 35.0%
CAAAAAACAAAGGAATGGGA+CGG - chr7_2:37331354-37331373 Msa1057180:intron 35.0%
TAGAATGGTCCTCTACTATT+TGG + chr7_2:37331395-37331414 None:intergenic 35.0%
TGAATCCAAACACACTTATC+CGG - chr7_2:37331480-37331499 Msa1057180:intron 35.0%
AATTATGCAAATCACCCTTC+CGG + chr7_2:37331517-37331536 None:intergenic 35.0%
! GATTTGAAATAGCGACTTCT+AGG - chr7_2:37331780-37331799 Msa1057180:intron 35.0%
! AGCAACGTTTTCTTTCCTAT+GGG + chr7_2:37331809-37331828 None:intergenic 35.0%
CATTATTACTTCATCTTGCC+TGG + chr7_2:37331872-37331891 None:intergenic 35.0%
TGTTGAAAATGCTTGATAGG+TGG + chr7_2:37332022-37332041 None:intergenic 35.0%
! AGCATTTTCAACAAACGAAC+CGG - chr7_2:37332029-37332048 Msa1057180:intron 35.0%
ATTCCATATTTATCGATGGC+CGG + chr7_2:37332051-37332070 None:intergenic 35.0%
!! TTTTGGCCTTCCTTGAAAAA+TGG - chr7_2:37332199-37332218 Msa1057180:intron 35.0%
! TTTGGCCTTCCTTGAAAAAT+GGG - chr7_2:37332200-37332219 Msa1057180:intron 35.0%
AATATGCTTGCTCATCTTTC+GGG + chr7_2:37332266-37332285 None:intergenic 35.0%
GAAAAACTTTCAACAGACAC+CGG - chr7_2:37332369-37332388 Msa1057180:intron 35.0%
TGGGTTCAAGGAAAAATATC+CGG + chr7_2:37332391-37332410 None:intergenic 35.0%
TTCAGCCTATGTCATATTGT+CGG + chr7_2:37332469-37332488 None:intergenic 35.0%
!!! TTTATTTTGTCTTGCGGAAG+AGG + chr7_2:37332534-37332553 None:intergenic 35.0%
CTTCCGCAAGACAAAATAAA+AGG - chr7_2:37332534-37332553 Msa1057180:intron 35.0%
TCCGCAAGACAAAATAAAAG+GGG - chr7_2:37332536-37332555 Msa1057180:intron 35.0%
!!! TCCCCTTTTATTTTGTCTTG+CGG + chr7_2:37332540-37332559 None:intergenic 35.0%
!!! CATTTGTCTGTTTTGGTGAA+TGG + chr7_2:37332620-37332639 None:intergenic 35.0%
!!! TTTATTTTGTGACTGGATCC+TGG + chr7_2:37332660-37332679 None:intergenic 35.0%
TTGCTAACAAAGAAGCAAGT+TGG + chr7_2:37332779-37332798 None:intergenic 35.0%
GTCCTTATTCCTAAAATTCC+GGG + chr7_2:37332986-37333005 None:intergenic 35.0%
GGTCCTTATTCCTAAAATTC+CGG + chr7_2:37332987-37333006 None:intergenic 35.0%
! TTTAGCGGATGAGATAAAAC+AGG + chr7_2:37333170-37333189 None:intergenic 35.0%
! TGTTTTATCTCATCCGCTAA+AGG - chr7_2:37333169-37333188 Msa1057180:intron 35.0%
CCATGTTGTGAATTATCTTC+AGG + chr7_2:37333296-37333315 None:intergenic 35.0%
CCTGAAGATAATTCACAACA+TGG - chr7_2:37333293-37333312 Msa1057180:intron 35.0%
!! CAGTTTTAATACGCGAGATA+CGG - chr7_2:37333383-37333402 Msa1057180:intron 35.0%
GAGCTTGTAATTCCAAATGA+TGG - chr7_2:37333509-37333528 Msa1057180:intron 35.0%
CTTGTAATTCCAAATGATGG+AGG - chr7_2:37333512-37333531 Msa1057180:intron 35.0%
! TAATTCCAAATGATGGAGGT+TGG - chr7_2:37333516-37333535 Msa1057180:intron 35.0%
TCAGAAGCTTATAGATGAGT+CGG + chr7_2:37333551-37333570 None:intergenic 35.0%
! ATTTGGAACAAACAGGTTGT+TGG + chr7_2:37333700-37333719 None:intergenic 35.0%
GACCGTTACTCTTGAAAATT+TGG + chr7_2:37333717-37333736 None:intergenic 35.0%
AAGTCCGCATGAATTAATAG+AGG - chr7_2:37333802-37333821 Msa1057180:intron 35.0%
! TGAAGCTTGGACAGATTTTT+GGG + chr7_2:37333875-37333894 None:intergenic 35.0%
! ATGAAGCTTGGACAGATTTT+TGG + chr7_2:37333876-37333895 None:intergenic 35.0%
!! GTGCTATTTGTAATGAAGCT+TGG + chr7_2:37333888-37333907 None:intergenic 35.0%
CTTGTAATGACTTCATGTCA+TGG + chr7_2:37334011-37334030 None:intergenic 35.0%
TCATTACAAGATAACGAAGG+AGG - chr7_2:37334021-37334040 Msa1057180:intron 35.0%
!!! TTTTTTGGGTGATTTCAACG+CGG + chr7_2:37334082-37334101 None:intergenic 35.0%
! AAAATTCTTTAAGGGGTCCT+TGG + chr7_2:37334107-37334126 None:intergenic 35.0%
! AAGGACCCCTTAAAGAATTT+TGG - chr7_2:37334106-37334125 Msa1057180:intron 35.0%
AGGCTCCAAAATTCTTTAAG+GGG + chr7_2:37334114-37334133 None:intergenic 35.0%
CTAGGCTCCAAAATTCTTTA+AGG + chr7_2:37334116-37334135 None:intergenic 35.0%
GGAACTAGACTATATATTGC+TGG + chr7_2:37334192-37334211 None:intergenic 35.0%
TCCTCTCATTCCAAATCTTT+GGG + chr7_2:37334261-37334280 None:intergenic 35.0%
ATCCTCTCATTCCAAATCTT+TGG + chr7_2:37334262-37334281 None:intergenic 35.0%
! ATTCTGTTCCTTCTTGGTTT+TGG + chr7_2:37334325-37334344 None:intergenic 35.0%
AGTATGATTCTGTTCCTTCT+TGG + chr7_2:37334331-37334350 None:intergenic 35.0%
!! TTTTATTTCGGAACCTATGG+TGG + chr7_2:37334354-37334373 None:intergenic 35.0%
!! GGTTTTTATTTCGGAACCTA+TGG + chr7_2:37334357-37334376 None:intergenic 35.0%
TCCGAAATAAAAACCAACGA+CGG - chr7_2:37334362-37334381 Msa1057180:intron 35.0%
!!! TCCGTCGTTGGTTTTTATTT+CGG + chr7_2:37334366-37334385 None:intergenic 35.0%
TTTAGATGTCAGTAGCATTG+TGG + chr7_2:37334665-37334684 None:intergenic 35.0%
!! TCTAAAGTTTTATCACGGAC+AGG - chr7_2:37334679-37334698 Msa1057180:intron 35.0%
GGAACTATCATCATCAATTC+CGG + chr7_2:37334818-37334837 None:intergenic 35.0%
!!! TCTGGTTCTTTTTCAAATGC+TGG - chr7_2:37335078-37335097 Msa1057180:intron 35.0%
GGATTCTCAATGATCTGAAT+AGG - chr7_2:37335099-37335118 Msa1057180:intron 35.0%
! ACCCAATTTTCTTTCGTAAC+GGG - chr7_2:37335231-37335250 Msa1057180:intron 35.0%
GCTAAGGAAAAGATTGTTCA+AGG + chr7_2:37335270-37335289 None:intergenic 35.0%
TGACAATGAGTGCAAAAATC+CGG - chr7_2:37335351-37335370 Msa1057180:intron 35.0%
AGTAGCATATGAATGGTTAC+CGG + chr7_2:37335373-37335392 None:intergenic 35.0%
TTCATGAGATAGTTGTTGAG+CGG + chr7_2:37335419-37335438 None:intergenic 35.0%
CTATCTCATGAAAGATCTTG+CGG - chr7_2:37335427-37335446 Msa1057180:intron 35.0%
TATCTCATGAAAGATCTTGC+GGG - chr7_2:37335428-37335447 Msa1057180:intron 35.0%
GTTGCGTTATCAATCAAAAG+AGG - chr7_2:37335504-37335523 Msa1057180:intron 35.0%
! TTGAATTGCCTCAAGAGTAT+TGG + chr7_2:37335572-37335591 None:intergenic 35.0%
!! TTTTGCAAGACTAATTTGCG+GGG + chr7_2:37335870-37335889 None:intergenic 35.0%
TATATTAGGGGTGAAACACT+TGG + chr7_2:37335933-37335952 None:intergenic 35.0%
AAGTGTTTCACCCCTAATAT+AGG - chr7_2:37335932-37335951 Msa1057180:intron 35.0%
AGTGTTTCACCCCTAATATA+GGG - chr7_2:37335933-37335952 Msa1057180:intron 35.0%
TTTCCCATTCCCTATATTAG+GGG + chr7_2:37335945-37335964 None:intergenic 35.0%
AATTCCATTGTCTACCTGTA+GGG - chr7_2:37336066-37336085 Msa1057180:intron 35.0%
! TCCATACAGAGCTAAGTTTT+GGG + chr7_2:37330094-37330113 None:intergenic 35.0%
TTATGTACTTGCATCTTCTG+TGG + chr7_2:37328743-37328762 None:intergenic 35.0%
AAAACACGTTGCGATAGATG+TGG - chr7_2:37328665-37328684 Msa1057180:CDS 40.0%
GTGGTTGACATGTCTTCATA+TGG + chr7_2:37328724-37328743 None:intergenic 40.0%
GAAGCATGAACGAACTTCAT+AGG - chr7_2:37329182-37329201 Msa1057180:intron 40.0%
GAAAACCATTGAGTCTGCTA+GGG + chr7_2:37329252-37329271 None:intergenic 40.0%
TGAAAACCATTGAGTCTGCT+AGG + chr7_2:37329253-37329272 None:intergenic 40.0%
AGAATAGTGTCCAACTACGT+TGG - chr7_2:37329692-37329711 Msa1057180:intron 40.0%
GAATAGTGTCCAACTACGTT+GGG - chr7_2:37329693-37329712 Msa1057180:intron 40.0%
!! ACCCAAAACTTAGCTCTGTA+TGG - chr7_2:37330090-37330109 Msa1057180:intron 40.0%
! GTCCATACAGAGCTAAGTTT+TGG + chr7_2:37330095-37330114 None:intergenic 40.0%
ATAAGGCCAAGAGAAAGGTT+AGG - chr7_2:37330177-37330196 Msa1057180:intron 40.0%
! AAATGTTTGTGCTGATGGCA+TGG + chr7_2:37330506-37330525 None:intergenic 40.0%
GAAGGAAATGTTTGTGCTGA+TGG + chr7_2:37330511-37330530 None:intergenic 40.0%
CATTTGTTCGCATATCTTCC+GGG + chr7_2:37330533-37330552 None:intergenic 40.0%
CTCTTATTCCTGTTCGATTC+CGG + chr7_2:37330594-37330613 None:intergenic 40.0%
CAGGAATAAGAGAAGGCTTA+TGG - chr7_2:37330602-37330621 Msa1057180:intron 40.0%
GCAATAACTGGACACATTTG+TGG + chr7_2:37330663-37330682 None:intergenic 40.0%
CAAATGTGTCCAGTTATTGC+TGG - chr7_2:37330663-37330682 Msa1057180:intron 40.0%
GATTCACGTGGAACATTTCT+TGG + chr7_2:37330769-37330788 None:intergenic 40.0%
ACGAGTTCGTGACATTATAC+CGG + chr7_2:37330884-37330903 None:intergenic 40.0%
TCACGAACTCGTCTATGAAA+AGG - chr7_2:37330892-37330911 Msa1057180:intron 40.0%
TCTTCCATGATTGCAATGTC+AGG + chr7_2:37330982-37331001 None:intergenic 40.0%
CAAAGTAGCATGCAAGGAAA+CGG - chr7_2:37331011-37331030 Msa1057180:intron 40.0%
!! AAACGGAAGAAGCATTGAAG+AGG - chr7_2:37331028-37331047 Msa1057180:intron 40.0%
GTTAACATCTGGTTATGGCT+TGG + chr7_2:37331201-37331220 None:intergenic 40.0%
TCTCGGTTAACATCTGGTTA+TGG + chr7_2:37331206-37331225 None:intergenic 40.0%
TAACCAGATGTTAACCGAGA+AGG - chr7_2:37331206-37331225 Msa1057180:intron 40.0%
!! ATTTCTGGAATGCACCTTCT+CGG + chr7_2:37331223-37331242 None:intergenic 40.0%
CATGAACCGCCAAAAAACAA+AGG - chr7_2:37331344-37331363 Msa1057180:intron 40.0%
ACCGCCAAAAAACAAAGGAA+TGG - chr7_2:37331349-37331368 Msa1057180:intron 40.0%
!!! CCCATTCCTTTGTTTTTTGG+CGG + chr7_2:37331353-37331372 None:intergenic 40.0%
CCGCCAAAAAACAAAGGAAT+GGG - chr7_2:37331350-37331369 Msa1057180:intron 40.0%
!!! CGTCCCATTCCTTTGTTTTT+TGG + chr7_2:37331356-37331375 None:intergenic 40.0%
GTGGAGCTGGATTAAGAAAT+TGG - chr7_2:37331421-37331440 Msa1057180:intron 40.0%
! TGGTGAGCTATCCTCTAAAA+TGG + chr7_2:37331451-37331470 None:intergenic 40.0%
GTTTGGATTCACTCAACTGA+TGG + chr7_2:37331471-37331490 None:intergenic 40.0%
AAACACACTTATCCGGCAAT+GGG - chr7_2:37331487-37331506 Msa1057180:intron 40.0%
CTGCTACTAACGGAAAATCA+AGG - chr7_2:37331541-37331560 Msa1057180:intron 40.0%
! TCATTTGTTTCATGGGCTGA+AGG + chr7_2:37331619-37331638 None:intergenic 40.0%
TTCAGCCCATGAAACAAATG+AGG - chr7_2:37331618-37331637 Msa1057180:intron 40.0%
TCAGCCCATGAAACAAATGA+GGG - chr7_2:37331619-37331638 Msa1057180:intron 40.0%
ATCCATCATGGAAACAAGAG+AGG - chr7_2:37331647-37331666 Msa1057180:intron 40.0%
! TACCTCTCTTGTTTCCATGA+TGG + chr7_2:37331652-37331671 None:intergenic 40.0%
ACGGCGAGAATATTCAGTTA+TGG + chr7_2:37331692-37331711 None:intergenic 40.0%
ACTCGTTGGATCATTGGTAA+CGG + chr7_2:37331711-37331730 None:intergenic 40.0%
ACCAATGATCCAACGAGTAT+TGG - chr7_2:37331713-37331732 Msa1057180:intron 40.0%
! AACGTTTTCTTTCCTATGGG+AGG + chr7_2:37331806-37331825 None:intergenic 40.0%
! CAGCAACGTTTTCTTTCCTA+TGG + chr7_2:37331810-37331829 None:intergenic 40.0%
! ATTTTGCGTAAAGAGCTTCC+AGG - chr7_2:37331851-37331870 Msa1057180:intron 40.0%
CTAGTGAAGTCGATTGTTCA+TGG + chr7_2:37332089-37332108 None:intergenic 40.0%
TCTTATTGTCCATCATGGGT+AGG + chr7_2:37332118-37332137 None:intergenic 40.0%
! GGTGTCTTATTGTCCATCAT+GGG + chr7_2:37332122-37332141 None:intergenic 40.0%
! AGGTGTCTTATTGTCCATCA+TGG + chr7_2:37332123-37332142 None:intergenic 40.0%
CAATAAGACACCTTTCCAAG+TGG - chr7_2:37332130-37332149 Msa1057180:intron 40.0%
!! TGCTGGAAGTGTATGCATTT+TGG - chr7_2:37332182-37332201 Msa1057180:intron 40.0%
! TTGGCCTTCCTTGAAAAATG+GGG - chr7_2:37332201-37332220 Msa1057180:intron 40.0%
ATATGCTTGCTCATCTTTCG+GGG + chr7_2:37332265-37332284 None:intergenic 40.0%
TTATATGTTGCGTGGGTTCA+AGG + chr7_2:37332403-37332422 None:intergenic 40.0%
GACGTCTTTATATGTTGCGT+GGG + chr7_2:37332410-37332429 None:intergenic 40.0%
TGACGTCTTTATATGTTGCG+TGG + chr7_2:37332411-37332430 None:intergenic 40.0%
TAAAGACGTCATCCGCATAA+AGG - chr7_2:37332420-37332439 Msa1057180:intron 40.0%
TCAGCCTATGTCATATTGTC+GGG + chr7_2:37332468-37332487 None:intergenic 40.0%
! GGGTATTTTACTTGTACCAG+AGG + chr7_2:37332587-37332606 None:intergenic 40.0%
! CTCTGCTCATTTGTCTGTTT+TGG + chr7_2:37332627-37332646 None:intergenic 40.0%
!! TTGCGGTGTTACATCAGTTT+GGG + chr7_2:37332691-37332710 None:intergenic 40.0%
!! ATTGCGGTGTTACATCAGTT+TGG + chr7_2:37332692-37332711 None:intergenic 40.0%
! AGGCTTTTGACACGTTAGAT+TGG + chr7_2:37332724-37332743 None:intergenic 40.0%
TGGAGGAAATATCGCGATTA+AGG + chr7_2:37332759-37332778 None:intergenic 40.0%
! CTAACAAAGAAGCAAGTTGG+AGG + chr7_2:37332776-37332795 None:intergenic 40.0%
TTGAAAATTGGCCAGTGCAA+TGG - chr7_2:37332934-37332953 Msa1057180:intron 40.0%
TGAAAATTGGCCAGTGCAAT+GGG - chr7_2:37332935-37332954 Msa1057180:intron 40.0%
!! CACCCGGAATTTTAGGAATA+AGG - chr7_2:37332981-37333000 Msa1057180:intron 40.0%
GTGTTTGACATGAATGCAGA+TGG + chr7_2:37333145-37333164 None:intergenic 40.0%
TTCTCAATAGTAACCATCGG+TGG - chr7_2:37333214-37333233 Msa1057180:intron 40.0%
TCTCAATAGTAACCATCGGT+GGG - chr7_2:37333215-37333234 Msa1057180:intron 40.0%
! TGAACTGTCAGGATCAGTTT+TGG + chr7_2:37333468-37333487 None:intergenic 40.0%
TGATTCCAACCTCCATCATT+TGG + chr7_2:37333524-37333543 None:intergenic 40.0%
CAGAAGCTTATAGATGAGTC+GGG + chr7_2:37333550-37333569 None:intergenic 40.0%
GACAAAGTTGCTTCGTGTTA+AGG + chr7_2:37333656-37333675 None:intergenic 40.0%
AACAAACAGGTTGTTGGAAG+CGG + chr7_2:37333694-37333713 None:intergenic 40.0%
GGACTTCTCTTCAATTAGGA+GGG + chr7_2:37333788-37333807 None:intergenic 40.0%
ATGCGGACTTCTCTTCAATT+AGG + chr7_2:37333792-37333811 None:intergenic 40.0%
! GAAGCTTGGACAGATTTTTG+GGG + chr7_2:37333874-37333893 None:intergenic 40.0%
TACTTGGAATAATGGCAGGA+TGG + chr7_2:37333941-37333960 None:intergenic 40.0%
CTAATGGGGTGCAATTTACT+TGG + chr7_2:37333957-37333976 None:intergenic 40.0%
ATAACGAAGGAGGTAAACGA+CGG - chr7_2:37334031-37334050 Msa1057180:intron 40.0%
!! CTTGGTGCTCATGAAAAAAG+AGG + chr7_2:37334057-37334076 None:intergenic 40.0%
!!! AGGGGTCCTTGGATTTTTTT+GGG + chr7_2:37334096-37334115 None:intergenic 40.0%
!!! AAGGGGTCCTTGGATTTTTT+TGG + chr7_2:37334097-37334116 None:intergenic 40.0%
TTTACGGAGAAATCTTTGGG+CGG + chr7_2:37334145-37334164 None:intergenic 40.0%
ACAGAATCATACTCCACCAT+AGG - chr7_2:37334338-37334357 Msa1057180:intron 40.0%
CATATCAGCAAATACAAGCC+TGG - chr7_2:37334400-37334419 Msa1057180:intron 40.0%
GAATCGGTAACAATGATTCC+AGG + chr7_2:37334421-37334440 None:intergenic 40.0%
AATGATTTAAACGGTGGGAG+TGG - chr7_2:37334463-37334482 Msa1057180:intron 40.0%
! TTTTGTACCACTGGATGTGT+TGG - chr7_2:37334625-37334644 Msa1057180:intron 40.0%
ACAATTAGCAAGTGCAACCT+TGG + chr7_2:37334971-37334990 None:intergenic 40.0%
AGTACAGGATGATGTCACTA+TGG + chr7_2:37334998-37335017 None:intergenic 40.0%
! AAAAGAACCAGAAGTGCACA+TGG + chr7_2:37335070-37335089 None:intergenic 40.0%
TCCTCAAAAGAATTTGGAGG+TGG + chr7_2:37335130-37335149 None:intergenic 40.0%
TAATCATGCTGATGCATCAG+AGG + chr7_2:37335157-37335176 None:intergenic 40.0%
AGCATGATTAACAGCTCCAA+AGG - chr7_2:37335167-37335186 Msa1057180:intron 40.0%
GCCCGTTACGAAAGAAAATT+GGG + chr7_2:37335235-37335254 None:intergenic 40.0%
TGCCCGTTACGAAAGAAAAT+TGG + chr7_2:37335236-37335255 None:intergenic 40.0%
GAAGGAAACAAATGCAGCTA+AGG + chr7_2:37335286-37335305 None:intergenic 40.0%
TGCACTCATTGTCAAGCTAT+AGG + chr7_2:37335345-37335364 None:intergenic 40.0%
CGTTGGAAGTAGCATATGAA+TGG + chr7_2:37335380-37335399 None:intergenic 40.0%
!! GGAAGGATTTGCTTTTACGT+TGG + chr7_2:37335397-37335416 None:intergenic 40.0%
TCATGAGATAGTTGTTGAGC+GGG + chr7_2:37335418-37335437 None:intergenic 40.0%
!! ATTGCCTCAAGAGTATTGGA+TGG + chr7_2:37335568-37335587 None:intergenic 40.0%
!! GTCTTCTAAGGCTCTTTGAA+TGG + chr7_2:37335656-37335675 None:intergenic 40.0%
GGAACAATCAACTTGAAACC+GGG + chr7_2:37335678-37335697 None:intergenic 40.0%
GGGAACAATCAACTTGAAAC+CGG + chr7_2:37335679-37335698 None:intergenic 40.0%
!! TTACAGAAGCTTTGGAAGGT+CGG + chr7_2:37335789-37335808 None:intergenic 40.0%
! GGATTTTTACGAACGTGGAA+GGG + chr7_2:37335895-37335914 None:intergenic 40.0%
! AGGATTTTTACGAACGTGGA+AGG + chr7_2:37335896-37335915 None:intergenic 40.0%
ACTTGGTATTAAGATCACGC+AGG + chr7_2:37335916-37335935 None:intergenic 40.0%
TTCACCCCTAATATAGGGAA+TGG - chr7_2:37335938-37335957 Msa1057180:intron 40.0%
TCACCCCTAATATAGGGAAT+GGG - chr7_2:37335939-37335958 Msa1057180:intron 40.0%
CTACAGGTAGACAATGGAAT+TGG + chr7_2:37336067-37336086 None:intergenic 40.0%
CAATTCCATTGTCTACCTGT+AGG - chr7_2:37336065-37336084 Msa1057180:intron 40.0%
!! ACCCAAAACTTAGCTCTGTA+TGG - chr7_2:37330090-37330109 Msa1057180:intron 40.0%
! GTCCATACAGAGCTAAGTTT+TGG + chr7_2:37330095-37330114 None:intergenic 40.0%
AAATAGTGCGTTAGAGTGTG+AGG + chr7_2:37336677-37336696 None:intergenic 40.0%
GAACATCGTGGATGATTCTT+AGG + chr7_2:37336745-37336764 None:intergenic 40.0%
! GTGCTTTGAACGTCCATAAA+AGG - chr7_2:37336805-37336824 Msa1057180:CDS 40.0%
AAAACACGTTGCGATAGATG+TGG - chr7_2:37328665-37328684 Msa1057180:CDS 40.0%
GTGGTTGACATGTCTTCATA+TGG + chr7_2:37328724-37328743 None:intergenic 40.0%
TCCCAAGTCCTTCGAAAGTA+AGG - chr7_2:37328604-37328623 Msa1057180:CDS 45.0%
CCCTTACTTTCGAAGGACTT+GGG + chr7_2:37328608-37328627 None:intergenic 45.0%
CCCAAGTCCTTCGAAAGTAA+GGG - chr7_2:37328605-37328624 Msa1057180:CDS 45.0%
ACCCTTACTTTCGAAGGACT+TGG + chr7_2:37328609-37328628 None:intergenic 45.0%
! CAAAGCACCCTTACTTTCGA+AGG + chr7_2:37328615-37328634 None:intergenic 45.0%
CCGAATACATCACACATGAC+CGG + chr7_2:37329134-37329153 None:intergenic 45.0%
CCGGTCATGTGTGATGTATT+CGG - chr7_2:37329131-37329150 Msa1057180:intron 45.0%
ACAAACCCTAGCAGACTCAA+TGG - chr7_2:37329244-37329263 Msa1057180:intron 45.0%
GAGACCCTACAAGTAGACAA+TGG + chr7_2:37330063-37330082 None:intergenic 45.0%
CAGATGCCTAACCTTTCTCT+TGG + chr7_2:37330186-37330205 None:intergenic 45.0%
CAAGAGAAAGGTTAGGCATC+TGG - chr7_2:37330184-37330203 Msa1057180:intron 45.0%
! AGAGGATGGGGGTTTTTGTT+GGG + chr7_2:37330241-37330260 None:intergenic 45.0%
! GATTTTGCTAGGGACAGACA+TGG + chr7_2:37330418-37330437 None:intergenic 45.0%
!! TTTGGGAGCGGATTTTGCTA+GGG + chr7_2:37330428-37330447 None:intergenic 45.0%
ACTCTGTTGCCTCCTTCTTT+GGG + chr7_2:37330445-37330464 None:intergenic 45.0%
TACTCTGTTGCCTCCTTCTT+TGG + chr7_2:37330446-37330465 None:intergenic 45.0%
GGGGCATGATATTCATGACA+CGG + chr7_2:37330476-37330495 None:intergenic 45.0%
CAGCACAAACATTTCCTTCC+CGG - chr7_2:37330512-37330531 Msa1057180:intron 45.0%
CGAAAGTGACTCTGTTAGTG+CGG + chr7_2:37330638-37330657 None:intergenic 45.0%
AATATGCGGCCAGCAATAAC+TGG + chr7_2:37330675-37330694 None:intergenic 45.0%
TCACGTGGAACATTTCTTGG+TGG + chr7_2:37330766-37330785 None:intergenic 45.0%
AATTTGATGTCTGCTTGCGG+TGG + chr7_2:37330802-37330821 None:intergenic 45.0%
! CATTATACCGGTGGTTTGGA+AGG + chr7_2:37330872-37330891 None:intergenic 45.0%
GTGACATTATACCGGTGGTT+TGG + chr7_2:37330876-37330895 None:intergenic 45.0%
AGTTCGTGACATTATACCGG+TGG + chr7_2:37330881-37330900 None:intergenic 45.0%
TCCATGATTGCAATGTCAGG+AGG + chr7_2:37330979-37330998 None:intergenic 45.0%
CTTAGCCAAAGTAGCATGCA+AGG - chr7_2:37331005-37331024 Msa1057180:intron 45.0%
! CGTTTCCTTGCATGCTACTT+TGG + chr7_2:37331013-37331032 None:intergenic 45.0%
! TCGGCTTGCTTGGAACATAA+CGG - chr7_2:37331258-37331277 Msa1057180:intron 45.0%
!! CTTGGAACATAACGGACACA+TGG - chr7_2:37331266-37331285 Msa1057180:intron 45.0%
AAAACAAAGGAATGGGACGG+AGG - chr7_2:37331357-37331376 Msa1057180:intron 45.0%
!! GTAGAGGACCATTCTAGCTT+TGG - chr7_2:37331399-37331418 Msa1057180:intron 45.0%
CATTGCCGGATAAGTGTGTT+TGG + chr7_2:37331488-37331507 None:intergenic 45.0%
CAAACACACTTATCCGGCAA+TGG - chr7_2:37331486-37331505 Msa1057180:intron 45.0%
AACACACTTATCCGGCAATG+GGG - chr7_2:37331488-37331507 Msa1057180:intron 45.0%
GGAAAATCAAGGATGATGCG+AGG - chr7_2:37331552-37331571 Msa1057180:intron 45.0%
AATCAAGGATGATGCGAGGA+AGG - chr7_2:37331556-37331575 Msa1057180:intron 45.0%
CAGCCCATGAAACAAATGAG+GGG - chr7_2:37331620-37331639 Msa1057180:intron 45.0%
AGCCCATGAAACAAATGAGG+GGG - chr7_2:37331621-37331640 Msa1057180:intron 45.0%
TGCCCCCTCATTTGTTTCAT+GGG + chr7_2:37331626-37331645 None:intergenic 45.0%
GCCAATACTCGTTGGATCAT+TGG + chr7_2:37331717-37331736 None:intergenic 45.0%
TGCATCATTTATGGCACGTG+TGG - chr7_2:37331890-37331909 Msa1057180:intron 45.0%
GCATCATTTATGGCACGTGT+GGG - chr7_2:37331891-37331910 Msa1057180:intron 45.0%
GAACCGGCCATCGATAAATA+TGG - chr7_2:37332045-37332064 Msa1057180:intron 45.0%
TAGCTGAATCCTACCCATGA+TGG - chr7_2:37332106-37332125 Msa1057180:intron 45.0%
TTAAGGTGAAGCTTGCCACT+TGG + chr7_2:37332148-37332167 None:intergenic 45.0%
GGGCAGCCAAGATATTGAAA+CGG - chr7_2:37332221-37332240 Msa1057180:intron 45.0%
!! CATGAATACTCAGAGGTGTC+TGG + chr7_2:37332350-37332369 None:intergenic 45.0%
TCCGCATAAAGGATGTGTGT+CGG - chr7_2:37332431-37332450 Msa1057180:intron 45.0%
ATAAAGGATGTGTGTCGGGA+GGG - chr7_2:37332436-37332455 Msa1057180:intron 45.0%
CAGCCTATGTCATATTGTCG+GGG + chr7_2:37332467-37332486 None:intergenic 45.0%
GAGATAAAGGATCCCCTTGA+CGG - chr7_2:37332558-37332577 Msa1057180:intron 45.0%
! TTGGTGAATGGTAACGCAGT+GGG + chr7_2:37332608-37332627 None:intergenic 45.0%
! TTTGGTGAATGGTAACGCAG+TGG + chr7_2:37332609-37332628 None:intergenic 45.0%
CTAACGTGTCAAAAGCCTTG+CGG - chr7_2:37332726-37332745 Msa1057180:intron 45.0%
GATTAAGGTTGACATCCGCA+AGG + chr7_2:37332744-37332763 None:intergenic 45.0%
CGAACAAAACCTCTTTGCTC+CGG - chr7_2:37332848-37332867 Msa1057180:intron 45.0%
GAACAAAACCTCTTTGCTCC+GGG - chr7_2:37332849-37332868 Msa1057180:intron 45.0%
AACAAAACCTCTTTGCTCCG+GGG - chr7_2:37332850-37332869 Msa1057180:intron 45.0%
ATGTATGCGCATCATATCCC+CGG + chr7_2:37332870-37332889 None:intergenic 45.0%
GAAAATTGGCCAGTGCAATG+GGG - chr7_2:37332936-37332955 Msa1057180:intron 45.0%
GTTCTCCATTTCCCTCTGAT+CGG - chr7_2:37333315-37333334 Msa1057180:intron 45.0%
TATCACCGATCAGAGGGAAA+TGG + chr7_2:37333323-37333342 None:intergenic 45.0%
ATTGCGTATCACCGATCAGA+GGG + chr7_2:37333329-37333348 None:intergenic 45.0%
AATTGCGTATCACCGATCAG+AGG + chr7_2:37333330-37333349 None:intergenic 45.0%
!! GGATCAGTTTTGGCGTGAAA+AGG + chr7_2:37333458-37333477 None:intergenic 45.0%
GACTAGAGCAATGAACTGTC+AGG + chr7_2:37333479-37333498 None:intergenic 45.0%
TGTGCAACTTGCATCAGATG+AGG + chr7_2:37333584-37333603 None:intergenic 45.0%
! GTTTGGAATAGGTCGGTGTT+TGG + chr7_2:37333622-37333641 None:intergenic 45.0%
CGGACTTCTCTTCAATTAGG+AGG + chr7_2:37333789-37333808 None:intergenic 45.0%
! ATCTTTGGGCGGATTTGACT+AGG + chr7_2:37334134-37334153 None:intergenic 45.0%
TCCAAATCTTTGGGCTGTGT+GGG + chr7_2:37334252-37334271 None:intergenic 45.0%
TTCCAAATCTTTGGGCTGTG+TGG + chr7_2:37334253-37334272 None:intergenic 45.0%
! GCCCAAAGATTTGGAATGAG+AGG - chr7_2:37334257-37334276 Msa1057180:intron 45.0%
AAAAGCTGCAGTGAACGAAG+AGG + chr7_2:37334575-37334594 None:intergenic 45.0%
AGTAGCATTGTGGCACCTAA+GGG + chr7_2:37334655-37334674 None:intergenic 45.0%
AGAACAGGATCAGTTACCAC+CGG - chr7_2:37334790-37334809 Msa1057180:intron 45.0%
ATCATCATCAATTCCGGCTC+CGG + chr7_2:37334812-37334831 None:intergenic 45.0%
AACAACTGAGCAGCTCCAAA+TGG + chr7_2:37334923-37334942 None:intergenic 45.0%
AGCAACATTGGATCAGACTG+AGG + chr7_2:37335037-37335056 None:intergenic 45.0%
GGATGCAGAAACAGCAACAT+TGG + chr7_2:37335049-37335068 None:intergenic 45.0%
! GCCACCTCCAAATTCTTTTG+AGG - chr7_2:37335126-37335145 Msa1057180:intron 45.0%
ATTAACAGCTCCAAAGGCAG+CGG - chr7_2:37335173-37335192 Msa1057180:intron 45.0%
CTAATTCGAGACAATCCGTC+AGG + chr7_2:37335210-37335229 None:intergenic 45.0%
!!! TTTTCTTTCGTAACGGGCAC+TGG - chr7_2:37335237-37335256 Msa1057180:intron 45.0%
GCTGCATTTGTTTCCTTCCT+AGG - chr7_2:37335288-37335307 Msa1057180:intron 45.0%
CCTTCCTAGGATACAACCTA+CGG - chr7_2:37335301-37335320 Msa1057180:intron 45.0%
GTAGTGACCGAACAAACGTT+TGG - chr7_2:37335479-37335498 Msa1057180:intron 45.0%
GCAACGACCAAACGTTTGTT+CGG + chr7_2:37335489-37335508 None:intergenic 45.0%
AAGGCTCTTTGAATGGTCGA+AGG + chr7_2:37335649-37335668 None:intergenic 45.0%
TCAAAGAGCCTTAGAAGACC+CGG - chr7_2:37335657-37335676 Msa1057180:intron 45.0%
ACTTGAAACCGGGTCTTCTA+AGG + chr7_2:37335668-37335687 None:intergenic 45.0%
! CGTATGCTCTCTTTAGGAAG+GGG + chr7_2:37335756-37335775 None:intergenic 45.0%
! GCGTATGCTCTCTTTAGGAA+GGG + chr7_2:37335757-37335776 None:intergenic 45.0%
! ACGCAGGATTTTTACGAACG+TGG + chr7_2:37335900-37335919 None:intergenic 45.0%
GGTTTAAATGGAGACCCTAC+AGG + chr7_2:37330073-37330092 None:intergenic 45.0%
TGGGAAAATCAAAGCAAGCG+TGG + chr7_2:37336767-37336786 None:intergenic 45.0%
TCCCAAGTCCTTCGAAAGTA+AGG - chr7_2:37328604-37328623 Msa1057180:CDS 45.0%
CCCTTACTTTCGAAGGACTT+GGG + chr7_2:37328608-37328627 None:intergenic 45.0%
CCCAAGTCCTTCGAAAGTAA+GGG - chr7_2:37328605-37328624 Msa1057180:CDS 45.0%
ACCCTTACTTTCGAAGGACT+TGG + chr7_2:37328609-37328628 None:intergenic 45.0%
! CAAAGCACCCTTACTTTCGA+AGG + chr7_2:37328615-37328634 None:intergenic 45.0%
!!! ATTTATTTATTTTTATTTGA+CGG - chr7_2:37329845-37329864 Msa1057180:intron 5.0%
!!! TTTTTTAAAAAAAAAAAACT+TGG - chr7_2:37329998-37330017 Msa1057180:intron 5.0%
!!! TATATATATTTTTTTTGATA+AGG - chr7_2:37330160-37330179 Msa1057180:intron 5.0%
!!! GAAATTTTATTAAAAAAAAA+AGG - chr7_2:37330278-37330297 Msa1057180:intron 5.0%
!! TTTAAATCATTATTATTTAT+TGG + chr7_2:37334454-37334473 None:intergenic 5.0%
!! ATAAATAATAATGATTTAAA+CGG - chr7_2:37334454-37334473 Msa1057180:intron 5.0%
TGGGACAATCAAAGCAAGCG+TGG + chr7_2:37328589-37328608 None:intergenic 50.0%
GAGAAAGGTTAGGCATCTGG+AGG - chr7_2:37330187-37330206 Msa1057180:intron 50.0%
! GAGTCTGAAGCATCCCAACT+AGG - chr7_2:37330209-37330228 Msa1057180:intron 50.0%
! CTGAAGCATCCCAACTAGGT+TGG - chr7_2:37330213-37330232 Msa1057180:intron 50.0%
TGTTGGGTGCCAACCTAGTT+GGG + chr7_2:37330225-37330244 None:intergenic 50.0%
TTGTTGGGTGCCAACCTAGT+TGG + chr7_2:37330226-37330245 None:intergenic 50.0%
! CAGAGGATGGGGGTTTTTGT+TGG + chr7_2:37330242-37330261 None:intergenic 50.0%
!! CTTTGGGAGCGGATTTTGCT+AGG + chr7_2:37330429-37330448 None:intergenic 50.0%
GCAAAATCCGCTCCCAAAGA+AGG - chr7_2:37330430-37330449 Msa1057180:intron 50.0%
AAATCCGCTCCCAAAGAAGG+AGG - chr7_2:37330433-37330452 Msa1057180:intron 50.0%
TGTTCGCATATCTTCCGGGA+AGG + chr7_2:37330529-37330548 None:intergenic 50.0%
!! AACAGTTATGCCACCGGTTC+CGG - chr7_2:37330572-37330591 Msa1057180:intron 50.0%
TTCCTGTTCGATTCCGGAAC+CGG + chr7_2:37330588-37330607 None:intergenic 50.0%
TGACTCTGTTAGTGCGGTTC+AGG + chr7_2:37330632-37330651 None:intergenic 50.0%
!!! GGTCTTTTTCGGGATTCACG+TGG + chr7_2:37330781-37330800 None:intergenic 50.0%
! TGCTTGCGGTGGTCTTTTTC+GGG + chr7_2:37330791-37330810 None:intergenic 50.0%
! CTGCTTGCGGTGGTCTTTTT+CGG + chr7_2:37330792-37330811 None:intergenic 50.0%
TAAGGCTAACACGGATGGGT+CGG + chr7_2:37330830-37330849 None:intergenic 50.0%
GGGTTAAGGCTAACACGGAT+GGG + chr7_2:37330834-37330853 None:intergenic 50.0%
TGGGTTAAGGCTAACACGGA+TGG + chr7_2:37330835-37330854 None:intergenic 50.0%
!! TCCGTGTTAGCCTTAACCCA+AGG - chr7_2:37330835-37330854 Msa1057180:intron 50.0%
CCCTTGGGTTAAGGCTAACA+CGG + chr7_2:37330839-37330858 None:intergenic 50.0%
!! CCGTGTTAGCCTTAACCCAA+GGG - chr7_2:37330836-37330855 Msa1057180:intron 50.0%
!! GTTAGCCTTAACCCAAGGGA+AGG - chr7_2:37330840-37330859 Msa1057180:intron 50.0%
!! ATGTCAGGAGGCACTTCGAA+AGG + chr7_2:37330967-37330986 None:intergenic 50.0%
GCCTCCTGACATTGCAATCA+TGG - chr7_2:37330975-37330994 Msa1057180:intron 50.0%
CATTGAAGAGGACCGCGTTT+CGG - chr7_2:37331040-37331059 Msa1057180:intron 50.0%
ATTGAAGAGGACCGCGTTTC+GGG - chr7_2:37331041-37331060 Msa1057180:intron 50.0%
TGCACACGGTGCATTCCATT+TGG + chr7_2:37331071-37331090 None:intergenic 50.0%
TGCTGTCTTGTATCCCACAG+AGG + chr7_2:37331134-37331153 None:intergenic 50.0%
GCACCTTCTCGGTTAACATC+TGG + chr7_2:37331212-37331231 None:intergenic 50.0%
! AGTTGAGGATTCGGCTTGCT+TGG - chr7_2:37331248-37331267 Msa1057180:intron 50.0%
AATGGGACGGAGGAATGCAA+GGG - chr7_2:37331367-37331386 Msa1057180:intron 50.0%
!! GAGGACCATTCTAGCTTTGG+TGG - chr7_2:37331402-37331421 Msa1057180:intron 50.0%
CAGCTCCACCAAAGCTAGAA+TGG + chr7_2:37331410-37331429 None:intergenic 50.0%
!! CATTCTAGCTTTGGTGGAGC+TGG - chr7_2:37331408-37331427 Msa1057180:intron 50.0%
TTATCCGGCAATGGGGTAAC+CGG - chr7_2:37331495-37331514 Msa1057180:intron 50.0%
CTGCCCCCTCATTTGTTTCA+TGG + chr7_2:37331627-37331646 None:intergenic 50.0%
TGGTGAGTGCCAATACTCGT+TGG + chr7_2:37331725-37331744 None:intergenic 50.0%
! GGGTTTAAGATCTAGCCCAC+CGG - chr7_2:37331911-37331930 Msa1057180:intron 50.0%
GTCTCAAGTTTGTCGCCCTT+GGG + chr7_2:37331940-37331959 None:intergenic 50.0%
! GTGAAGCTTGCCACTTGGAA+AGG + chr7_2:37332143-37332162 None:intergenic 50.0%
!!! GCTGCCCCATTTTTCAAGGA+AGG + chr7_2:37332208-37332227 None:intergenic 50.0%
!! CTTGGCTGCCCCATTTTTCA+AGG + chr7_2:37332212-37332231 None:intergenic 50.0%
CATCTTTCGGGGTTTGCGTT+GGG + chr7_2:37332254-37332273 None:intergenic 50.0%
TCATCTTTCGGGGTTTGCGT+TGG + chr7_2:37332255-37332274 None:intergenic 50.0%
!! ATACTCAGAGGTGTCTGGTC+AGG + chr7_2:37332345-37332364 None:intergenic 50.0%
CCCGACACACATCCTTTATG+CGG + chr7_2:37332435-37332454 None:intergenic 50.0%
CCGCATAAAGGATGTGTGTC+GGG - chr7_2:37332432-37332451 Msa1057180:intron 50.0%
CATAAAGGATGTGTGTCGGG+AGG - chr7_2:37332435-37332454 Msa1057180:intron 50.0%
ACGCCCCGACAATATGACAT+AGG - chr7_2:37332461-37332480 Msa1057180:intron 50.0%
TGCGGAAGAGGTCCTTAGTA+GGG + chr7_2:37332522-37332541 None:intergenic 50.0%
TTGCGGAAGAGGTCCTTAGT+AGG + chr7_2:37332523-37332542 None:intergenic 50.0%
! TGGTGAATGGTAACGCAGTG+GGG + chr7_2:37332607-37332626 None:intergenic 50.0%
GAGCAGAGCGTAAAATAGCC+AGG - chr7_2:37332639-37332658 Msa1057180:intron 50.0%
ATCATATCCCCGGAGCAAAG+AGG + chr7_2:37332860-37332879 None:intergenic 50.0%
TGAATTTCGCCCCATTGCAC+TGG + chr7_2:37332948-37332967 None:intergenic 50.0%
!! AATTCCGGGTGCTGCTTCTA+TGG + chr7_2:37332972-37332991 None:intergenic 50.0%
! GAAGCAGCACCCGGAATTTT+AGG - chr7_2:37332974-37332993 Msa1057180:intron 50.0%
!!! CCAACACTTTTGGGACATCG+TGG + chr7_2:37333086-37333105 None:intergenic 50.0%
! CCACGATGTCCCAAAAGTGT+TGG - chr7_2:37333083-37333102 Msa1057180:intron 50.0%
AAATGTCCCCCAAATCCGTC+AGG - chr7_2:37333109-37333128 Msa1057180:intron 50.0%
GTTGACGGCTATGCCTTTAG+CGG + chr7_2:37333185-37333204 None:intergenic 50.0%
TGATAGAGTCATCCCACCGA+TGG + chr7_2:37333230-37333249 None:intergenic 50.0%
TTGTTGGAAGCGGAATGCAC+AGG + chr7_2:37333684-37333703 None:intergenic 50.0%
GGTGATTTCAACGCGGTTCT+TGG + chr7_2:37334075-37334094 None:intergenic 50.0%
CCAAATCTTTGGGCTGTGTG+GGG + chr7_2:37334251-37334270 None:intergenic 50.0%
TCGGTTGCATAATCCGTCGT+TGG + chr7_2:37334378-37334397 None:intergenic 50.0%
CAGTAGCATTGTGGCACCTA+AGG + chr7_2:37334656-37334675 None:intergenic 50.0%
! TACAGCAGAAGCACATGCTC+AGG + chr7_2:37334866-37334885 None:intergenic 50.0%
! TAGCAGTGCTGTCCCTTTTG+CGG - chr7_2:37334888-37334907 Msa1057180:intron 50.0%
! TGTCCCTTTTGCGGATTCCA+TGG - chr7_2:37334897-37334916 Msa1057180:intron 50.0%
TGGCCATGGAATCCGCAAAA+GGG + chr7_2:37334903-37334922 None:intergenic 50.0%
ATGGCCATGGAATCCGCAAA+AGG + chr7_2:37334904-37334923 None:intergenic 50.0%
TTGCGGATTCCATGGCCATT+TGG - chr7_2:37334905-37334924 Msa1057180:intron 50.0%
CTGATCAATTTCCAGCGCCA+AGG - chr7_2:37334951-37334970 Msa1057180:intron 50.0%
AGCAACACGTGACAGAGTAC+AGG + chr7_2:37335013-37335032 None:intergenic 50.0%
TCTGCATCCATGTGCACTTC+TGG - chr7_2:37335060-37335079 Msa1057180:intron 50.0%
ATTGGATCATCCGCTGCCTT+TGG + chr7_2:37335186-37335205 None:intergenic 50.0%
GCGGATGATCCAATTCCTGA+CGG - chr7_2:37335192-37335211 Msa1057180:intron 50.0%
CGAGACAATCCGTCAGGAAT+TGG + chr7_2:37335204-37335223 None:intergenic 50.0%
CCGTAGGTTGTATCCTAGGA+AGG + chr7_2:37335304-37335323 None:intergenic 50.0%
CTTGCCGTAGGTTGTATCCT+AGG + chr7_2:37335308-37335327 None:intergenic 50.0%
ATGATGTGACTGCTTGCCGT+AGG + chr7_2:37335320-37335339 None:intergenic 50.0%
GAGATAGTTGTTGAGCGGGA+AGG + chr7_2:37335414-37335433 None:intergenic 50.0%
! TCACTACGCTCGCATTTTGG+TGG + chr7_2:37335466-37335485 None:intergenic 50.0%
ATTGGATGGAGCGTACGCTT+CGG + chr7_2:37335554-37335573 None:intergenic 50.0%
CGCTCCATCCAATACTCTTG+AGG - chr7_2:37335561-37335580 Msa1057180:intron 50.0%
CAACGAAACTGACATGCGCA+CGG + chr7_2:37335712-37335731 None:intergenic 50.0%
! GGCGTATGCTCTCTTTAGGA+AGG + chr7_2:37335758-37335777 None:intergenic 50.0%
GCATGGCGTATGCTCTCTTT+AGG + chr7_2:37335762-37335781 None:intergenic 50.0%
!! AGAAGCTTTGGAAGGTCGGA+GGG + chr7_2:37335785-37335804 None:intergenic 50.0%
! GGACGACTTGTTCTGAGCAA+GGG + chr7_2:37335849-37335868 None:intergenic 50.0%
TTGCACAGGCACGAATAAGG+CGG + chr7_2:37335982-37336001 None:intergenic 50.0%
CCTTTGCACAGGCACGAATA+AGG + chr7_2:37335985-37336004 None:intergenic 50.0%
CCTTATTCGTGCCTGTGCAA+AGG - chr7_2:37335982-37336001 Msa1057180:intron 50.0%
GAATTGGACTTCCCAATGCC+GGG + chr7_2:37336051-37336070 None:intergenic 50.0%
GGAATTGGACTTCCCAATGC+CGG + chr7_2:37336052-37336071 None:intergenic 50.0%
GAGACCCTACAGGTAGACAA+TGG + chr7_2:37336073-37336092 None:intergenic 50.0%
AGTGCGTTAGAGTGTGAGGT+AGG + chr7_2:37336673-37336692 None:intergenic 50.0%
AAAGCAAGCGTGGAACATCG+TGG + chr7_2:37336757-37336776 None:intergenic 50.0%
CATCACACATGACCGGAGCT+AGG + chr7_2:37329127-37329146 None:intergenic 55.0%
GAGTAGGGTCCCAACGTAGT+TGG + chr7_2:37329705-37329724 None:intergenic 55.0%
TTGGAAAGGCGGCAGAGGAT+GGG + chr7_2:37330254-37330273 None:intergenic 55.0%
ATTGGAAAGGCGGCAGAGGA+TGG + chr7_2:37330255-37330274 None:intergenic 55.0%
CCTCTGCCGCCTTTCCAATA+CGG - chr7_2:37330256-37330275 Msa1057180:intron 55.0%
! GTTGCCTCCTTCTTTGGGAG+CGG + chr7_2:37330440-37330459 None:intergenic 55.0%
CTGATGGCATGGCAGCTTTG+GGG + chr7_2:37330495-37330514 None:intergenic 55.0%
GCTGATGGCATGGCAGCTTT+GGG + chr7_2:37330496-37330515 None:intergenic 55.0%
TGCTGATGGCATGGCAGCTT+TGG + chr7_2:37330497-37330516 None:intergenic 55.0%
AGCCTTAACCCAAGGGAAGG+TGG - chr7_2:37330843-37330862 Msa1057180:intron 55.0%
GCCTTAACCCAAGGGAAGGT+GGG - chr7_2:37330844-37330863 Msa1057180:intron 55.0%
TCCCACCTTCCCTTGGGTTA+AGG + chr7_2:37330848-37330867 None:intergenic 55.0%
!! CATTTGGCTTGCCCGAAACG+CGG + chr7_2:37331055-37331074 None:intergenic 55.0%
GGAATGCACCGTGTGCACAA+TGG - chr7_2:37331074-37331093 Msa1057180:intron 55.0%
ATACAAGACAGCAGCGCTGC+TGG - chr7_2:37331141-37331160 Msa1057180:intron 55.0%
ACAGTCAAGGGGCTGCACTT+TGG + chr7_2:37331295-37331314 None:intergenic 55.0%
GAATGGGACGGAGGAATGCA+AGG - chr7_2:37331366-37331385 Msa1057180:intron 55.0%
!! GCAAGGGCGCCAAATAGTAG+AGG - chr7_2:37331383-37331402 Msa1057180:intron 55.0%
ATGAGGGGGCAGATCCATCA+TGG - chr7_2:37331635-37331654 Msa1057180:intron 55.0%
GGTCTCAAGTTTGTCGCCCT+TGG + chr7_2:37331941-37331960 None:intergenic 55.0%
! CCTTAGTAGGGCGCTAGAGA+TGG + chr7_2:37332510-37332529 None:intergenic 55.0%
CCATCTCTAGCGCCCTACTA+AGG - chr7_2:37332507-37332526 Msa1057180:intron 55.0%
!! TACCAGAGGTGTCCGTCAAG+GGG + chr7_2:37332573-37332592 None:intergenic 55.0%
!! GTACCAGAGGTGTCCGTCAA+GGG + chr7_2:37332574-37332593 None:intergenic 55.0%
!! TGTACCAGAGGTGTCCGTCA+AGG + chr7_2:37332575-37332594 None:intergenic 55.0%
TCAGCCATAGAAGCAGCACC+CGG - chr7_2:37332965-37332984 Msa1057180:intron 55.0%
TGACGTGGTGAGTTCCGTTC+AGG + chr7_2:37333059-37333078 None:intergenic 55.0%
TCTTTGGGCTGTGTGGGGTT+CGG + chr7_2:37334246-37334265 None:intergenic 55.0%
CCCCACACAGCCCAAAGATT+TGG - chr7_2:37334248-37334267 Msa1057180:intron 55.0%
TCCACCAAAAACCCGCTCCA+GGG + chr7_2:37334491-37334510 None:intergenic 55.0%
ATCATCAATTCCGGCTCCGG+TGG + chr7_2:37334809-37334828 None:intergenic 55.0%
! AGCAGAAGCACATGCTCAGG+AGG + chr7_2:37334863-37334882 None:intergenic 55.0%
GCAAAAGGGACAGCACTGCT+AGG + chr7_2:37334889-37334908 None:intergenic 55.0%
TGAGCAGCTCCAAATGGCCA+TGG + chr7_2:37334917-37334936 None:intergenic 55.0%
!! CGCTCGCATTTTGGTGGACA+TGG + chr7_2:37335460-37335479 None:intergenic 55.0%
! CGGTCACTACGCTCGCATTT+TGG + chr7_2:37335469-37335488 None:intergenic 55.0%
GCTTCGGGAGATTGCAAGTG+CGG + chr7_2:37335538-37335557 None:intergenic 55.0%
TTGGATGGAGCGTACGCTTC+GGG + chr7_2:37335553-37335572 None:intergenic 55.0%
GCAACACGCATGCACAAGTG+TGG + chr7_2:37335605-37335624 None:intergenic 55.0%
AACTGACATGCGCACGGTCT+GGG + chr7_2:37335706-37335725 None:intergenic 55.0%
AAACTGACATGCGCACGGTC+TGG + chr7_2:37335707-37335726 None:intergenic 55.0%
CGTGCGCATGTCAGTTTCGT+TGG - chr7_2:37335710-37335729 Msa1057180:intron 55.0%
!! GAAGCTTTGGAAGGTCGGAG+GGG + chr7_2:37335784-37335803 None:intergenic 55.0%
!! CAGAAGCTTTGGAAGGTCGG+AGG + chr7_2:37335786-37335805 None:intergenic 55.0%
! GGGACGACTTGTTCTGAGCA+AGG + chr7_2:37335850-37335869 None:intergenic 55.0%
TGTGCAAAGGAGACCGGTGA+GGG - chr7_2:37335995-37336014 Msa1057180:intron 55.0%
AACCACTGGGATGTGAGGTG+TGG - chr7_2:37336018-37336037 Msa1057180:intron 55.0%
TGGAAAGGCGGCAGAGGATG+GGG + chr7_2:37330253-37330272 None:intergenic 60.0%
CCGTATTGGAAAGGCGGCAG+AGG + chr7_2:37330259-37330278 None:intergenic 60.0%
CTGTTCGATTCCGGAACCGG+TGG + chr7_2:37330585-37330604 None:intergenic 60.0%
!! CACCGGTTCCGGAATCGAAC+AGG - chr7_2:37330583-37330602 Msa1057180:intron 60.0%
GAAGGCTCCCACCTTCCCTT+GGG + chr7_2:37330854-37330873 None:intergenic 60.0%
GTGGGAGCCTTCCAAACCAC+CGG - chr7_2:37330862-37330881 Msa1057180:intron 60.0%
CGCGTTTCGGGCAAGCCAAA+TGG - chr7_2:37331053-37331072 Msa1057180:intron 60.0%
GACCAGCACATCACGCAGCT+GGG - chr7_2:37331101-37331120 Msa1057180:intron 60.0%
CAGCGCTGCTGGAGAGTCAA+GGG - chr7_2:37331152-37331171 Msa1057180:intron 60.0%
CCTTCCGGTTACCCCATTGC+CGG + chr7_2:37331502-37331521 None:intergenic 60.0%
CGGCAATGGGGTAACCGGAA+GGG - chr7_2:37331500-37331519 Msa1057180:intron 60.0%
GCGACTTCTAGGCCTCCCAT+AGG - chr7_2:37331791-37331810 Msa1057180:intron 60.0%
GTTTGTCGCCCTTGGGAAGC+CGG + chr7_2:37331933-37331952 None:intergenic 60.0%
!! CTCAGAGGTGTCTGGTCAGG+TGG + chr7_2:37332342-37332361 None:intergenic 60.0%
! GTAGGGCGCTAGAGATGGAG+AGG + chr7_2:37332505-37332524 None:intergenic 60.0%
! ATCCCCTTGACGGACACCTC+TGG - chr7_2:37332568-37332587 Msa1057180:intron 60.0%
!! CCTGGTCCTGACGGATTTGG+GGG + chr7_2:37333118-37333137 None:intergenic 60.0%
!! CCCTGGTCCTGACGGATTTG+GGG + chr7_2:37333119-37333138 None:intergenic 60.0%
CCCCAAATCCGTCAGGACCA+GGG - chr7_2:37333116-37333135 Msa1057180:intron 60.0%
!! CCCCTGGTCCTGACGGATTT+GGG + chr7_2:37333120-37333139 None:intergenic 60.0%
CCCAAATCCGTCAGGACCAG+GGG - chr7_2:37333117-37333136 Msa1057180:intron 60.0%
ATGAATGCAGATGGCGCCCC+TGG + chr7_2:37333136-37333155 None:intergenic 60.0%
CTCCACCAAAAACCCGCTCC+AGG + chr7_2:37334492-37334511 None:intergenic 60.0%
! GGATGTGTTGGCACGCCCTT+AGG - chr7_2:37334637-37334656 Msa1057180:intron 60.0%
GGATCAGTTACCACCGGAGC+CGG - chr7_2:37334796-37334815 Msa1057180:intron 60.0%
AGCAAGTGCAACCTTGGCGC+TGG + chr7_2:37334965-37334984 None:intergenic 60.0%
CGGGAGATTGCAAGTGCGGT+GGG + chr7_2:37335534-37335553 None:intergenic 60.0%
TCGGGAGATTGCAAGTGCGG+TGG + chr7_2:37335535-37335554 None:intergenic 60.0%
TTTGGAAGGTCGGAGGGGCA+TGG + chr7_2:37335779-37335798 None:intergenic 60.0%
CGTGCCTGTGCAAAGGAGAC+CGG - chr7_2:37335989-37336008 Msa1057180:intron 60.0%
CTCACCGGTCTCCTTTGCAC+AGG + chr7_2:37335996-37336015 None:intergenic 60.0%
CTGTGCAAAGGAGACCGGTG+AGG - chr7_2:37335994-37336013 Msa1057180:intron 60.0%
AGACCGGTGAGGGAACCACT+GGG - chr7_2:37336005-37336024 Msa1057180:intron 60.0%
CATCCCAGTGGTTCCCTCAC+CGG + chr7_2:37336011-37336030 None:intergenic 60.0%
GAGGGAACCACTGGGATGTG+AGG - chr7_2:37336013-37336032 Msa1057180:intron 60.0%
GTCCACACCTCACATCCCAG+TGG + chr7_2:37336023-37336042 None:intergenic 60.0%
TTGGACTTCCCAATGCCGGG+CGG + chr7_2:37336048-37336067 None:intergenic 60.0%
GGAAAGGCGGCAGAGGATGG+GGG + chr7_2:37330252-37330271 None:intergenic 65.0%
GGAAGGCTCCCACCTTCCCT+TGG + chr7_2:37330855-37330874 None:intergenic 65.0%
GGTCGCGGCCATTGTGCACA+CGG + chr7_2:37331085-37331104 None:intergenic 65.0%
! GCTGCGTGATGTGCTGGTCG+CGG + chr7_2:37331100-37331119 None:intergenic 65.0%
CGACCAGCACATCACGCAGC+TGG - chr7_2:37331100-37331119 Msa1057180:intron 65.0%
CTCCCAGCTGCGTGATGTGC+TGG + chr7_2:37331106-37331125 None:intergenic 65.0%
AGCTGGGAGCTGCACCTCTG+TGG - chr7_2:37331117-37331136 Msa1057180:intron 65.0%
GCTGGGAGCTGCACCTCTGT+GGG - chr7_2:37331118-37331137 Msa1057180:intron 65.0%
GCAGCGCTGCTGGAGAGTCA+AGG - chr7_2:37331151-37331170 Msa1057180:intron 65.0%
CCGGCAATGGGGTAACCGGA+AGG - chr7_2:37331499-37331518 Msa1057180:intron 65.0%
!! TCTAGCCCACCGGCTTCCCA+AGG - chr7_2:37331921-37331940 Msa1057180:intron 65.0%
!! CTAGCCCACCGGCTTCCCAA+GGG - chr7_2:37331922-37331941 Msa1057180:intron 65.0%
GGACATCGTGGCTGCTGACG+TGG + chr7_2:37333074-37333093 None:intergenic 65.0%
CCCCCAAATCCGTCAGGACC+AGG - chr7_2:37333115-37333134 Msa1057180:intron 65.0%
!! GCCCCTGGTCCTGACGGATT+TGG + chr7_2:37333121-37333140 None:intergenic 65.0%
AAACGGTGGGAGTGGTGCCC+TGG - chr7_2:37334471-37334490 Msa1057180:intron 65.0%
!! GGTGCCCTGGAGCGGGTTTT+TGG - chr7_2:37334484-37334503 Msa1057180:intron 65.0%
!! GCCCTGGAGCGGGTTTTTGG+TGG - chr7_2:37334487-37334506 Msa1057180:intron 65.0%
GGGCGTGCCAACACATCCAG+TGG + chr7_2:37334635-37334654 None:intergenic 65.0%
GAGACCGGTGAGGGAACCAC+TGG - chr7_2:37336004-37336023 Msa1057180:intron 65.0%
TGGACTTCCCAATGCCGGGC+GGG + chr7_2:37336047-37336066 None:intergenic 65.0%
GTCGCCCTTGGGAAGCCGGT+GGG + chr7_2:37331929-37331948 None:intergenic 70.0%
TGTCGCCCTTGGGAAGCCGG+TGG + chr7_2:37331930-37331949 None:intergenic 70.0%
GATGGCGCCCCTGGTCCTGA+CGG + chr7_2:37333127-37333146 None:intergenic 70.0%
GTGGGAGTGGTGCCCTGGAG+CGG - chr7_2:37334476-37334495 Msa1057180:intron 70.0%
TGGGAGTGGTGCCCTGGAGC+GGG - chr7_2:37334477-37334496 Msa1057180:intron 70.0%
ATGCGCACGGTCTGGGCTGC+GGG + chr7_2:37335699-37335718 None:intergenic 70.0%
CATGCGCACGGTCTGGGCTG+CGG + chr7_2:37335700-37335719 None:intergenic 70.0%
GTGAGGTGTGGACACCCGCC+CGG - chr7_2:37336030-37336049 Msa1057180:intron 70.0%
TGTGGACACCCGCCCGGCAT+TGG - chr7_2:37336036-37336055 Msa1057180:intron 70.0%
GTGGACACCCGCCCGGCATT+GGG - chr7_2:37336037-37336056 Msa1057180:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 37328581 37336950 37328581 ID=Msa1057180;Name=Msa1057180
chr7_2 mRNA 37328581 37336950 37328581 ID=Msa1057180-mRNA-1;Parent=Msa1057180;Name=Msa1057180-mRNA-1;_AED=0.36;_eAED=0.40;_QI=0|0|0|1|0|0|2|0|111
chr7_2 exon 37336777 37336950 37336777 ID=Msa1057180-mRNA-1:exon:7163;Parent=Msa1057180-mRNA-1
chr7_2 exon 37328581 37328742 37328581 ID=Msa1057180-mRNA-1:exon:7162;Parent=Msa1057180-mRNA-1
chr7_2 CDS 37336777 37336950 37336777 ID=Msa1057180-mRNA-1:cds;Parent=Msa1057180-mRNA-1
chr7_2 CDS 37328581 37328742 37328581 ID=Msa1057180-mRNA-1:cds;Parent=Msa1057180-mRNA-1
Gene Sequence

>Msa1057180

ATGTTCCACGCTTGCTTTGATTGTCCCAAGTCCTTCGAAAGTAAGGGTGCTTTGAACATCGATAAAAGGTTTGAATGTGAAGCTAAAACACGTTGCGATAGATGTGGTAAATTATGCTCATCTATTCTTTCTTGTTCTAACCATATGAAGACATGTCAACCACAGAAGATGCAATCCTTCGAAAGTAAGGGTGCTTTGAACGTCCATAAAAGGTTTGAATGTGAAGCTAAAACACGTTGCGATAGATGTGGTAAATTATGCTCATCTATTCTTTCTTGTTCTAACCATATGAAGACATGTCAACCACAGAAGATGCAAGTACATAATCCTCAATGA

Protein sequence

>Msa1057180

MFHACFDCPKSFESKGALNIDKRFECEAKTRCDRCGKLCSSILSCSNHMKTCQPQKMQSFESKGALNVHKRFECEAKTRCDRCGKLCSSILSCSNHMKTCQPQKMQVHNPQ*