Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061480 | KEH22976.1 | 90.446 | 471 | 45 | 0 | 3 | 473 | 17 | 487 | 0.0 | 845 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061480 | sp|Q9ATB4|TAD2B_ARATH | 56.008 | 491 | 170 | 9 | 4 | 471 | 18 | 485 | 0.0 | 526 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061480 | A0A072U0P5 | 90.446 | 471 | 45 | 0 | 3 | 473 | 17 | 487 | 0.0 | 845 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1061480 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061480 | MtrunA17_Chr7g0239471 | 90.446 | 471 | 45 | 0 | 3 | 473 | 17 | 487 | 0.0 | 845 |
| Msa1061480 | MtrunA17_Chr2g0290321 | 71.881 | 537 | 80 | 8 | 4 | 473 | 19 | 551 | 0.0 | 749 |
| Msa1061480 | MtrunA17_Chr2g0290341 | 67.729 | 502 | 100 | 5 | 20 | 473 | 19 | 506 | 0.0 | 665 |
| Msa1061480 | MtrunA17_Chr3g0120841 | 48.155 | 542 | 207 | 8 | 2 | 469 | 19 | 560 | 1.08e-155 | 454 |
| Msa1061480 | MtrunA17_Chr3g0120231 | 64.423 | 208 | 62 | 1 | 278 | 473 | 2 | 209 | 1.94e-84 | 258 |
| Msa1061480 | MtrunA17_Chr3g0120201 | 45.420 | 262 | 122 | 3 | 223 | 469 | 6 | 261 | 4.35e-69 | 221 |
| Msa1061480 | MtrunA17_Chr3g0120221 | 62.346 | 162 | 59 | 1 | 4 | 163 | 16 | 177 | 5.74e-69 | 218 |
| Msa1061480 | MtrunA17_Chr7g0238851 | 89.610 | 77 | 8 | 0 | 5 | 81 | 5 | 81 | 2.04e-36 | 130 |
| Msa1061480 | MtrunA17_Chr3g0120191 | 61.644 | 73 | 28 | 0 | 93 | 165 | 11 | 83 | 3.26e-28 | 108 |
| Msa1061480 | MtrunA17_Chr3g0120181 | 72.414 | 58 | 16 | 0 | 24 | 81 | 2 | 59 | 4.96e-27 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061480 | AT4G16420.3 | 56.415 | 491 | 167 | 10 | 4 | 471 | 18 | 484 | 0.0 | 527 |
| Msa1061480 | AT4G16420.2 | 55.894 | 492 | 165 | 9 | 4 | 471 | 18 | 481 | 0.0 | 526 |
| Msa1061480 | AT4G16420.1 | 56.008 | 491 | 170 | 9 | 4 | 471 | 18 | 485 | 0.0 | 526 |
| Msa1061480 | AT3G07740.1 | 43.702 | 524 | 238 | 8 | 5 | 471 | 22 | 545 | 1.66e-137 | 407 |
| Msa1061480 | AT3G07740.3 | 43.762 | 505 | 228 | 7 | 23 | 471 | 20 | 524 | 1.65e-135 | 401 |
| Msa1061480 | AT3G07740.4 | 43.126 | 531 | 238 | 9 | 5 | 471 | 22 | 552 | 1.45e-134 | 400 |
| Msa1061480 | AT3G07740.2 | 43.340 | 473 | 212 | 7 | 55 | 471 | 2 | 474 | 6.56e-122 | 364 |
Find 115 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGTCGTTTCTTGAGGATTT+TGG | 0.167305 | 7_2:+50962851 | None:intergenic |
| TATATTATAGGATCGGATTC+TGG | 0.183755 | 7_2:-50963096 | Msa1061480:intron |
| GGTGTTAAATCCTTCTTAAA+TGG | 0.239875 | 7_2:+50962474 | None:intergenic |
| AAATGTATGGCATGAATAAC+TGG | 0.272278 | 7_2:-50963597 | Msa1061480:CDS |
| AAACGTCTATGCTGCGAGTT+AGG | 0.281520 | 7_2:-50961912 | Msa1061480:CDS |
| AGTAGCTCGCCCTGCAGGTC+TGG | 0.289473 | 7_2:+50962090 | None:intergenic |
| ACAGACTCCTCAAGAAATTA+TGG | 0.304851 | 7_2:-50962884 | Msa1061480:intron |
| AGTTCTGTGTTCAGAGATAA+TGG | 0.309266 | 7_2:+50962371 | None:intergenic |
| GAAAAGAATTCAAGAGCTTA+AGG | 0.314875 | 7_2:-50962346 | Msa1061480:intron |
| AAGAAACGACGGCCCTTCTT+TGG | 0.315629 | 7_2:-50962840 | Msa1061480:CDS |
| ATGCTCATTAAGAAGGGATT+TGG | 0.323014 | 7_2:-50961756 | Msa1061480:CDS |
| CTCTCCATGCTTCCCTCTTC+CGG | 0.329198 | 7_2:-50963500 | Msa1061480:intron |
| TGATACGTATCTATAATAAA+AGG | 0.333141 | 7_2:-50962685 | Msa1061480:intron |
| TCAACACATAAGTCAAAATC+TGG | 0.338230 | 7_2:+50964096 | None:intergenic |
| TTGGAACCCTGCTATTGTTC+GGG | 0.341860 | 7_2:+50962143 | None:intergenic |
| TCCCTCTCATTTGCCCCGAC+TGG | 0.345302 | 7_2:-50963777 | Msa1061480:CDS |
| ACACTATAGGATTGTGTACT+TGG | 0.367311 | 7_2:-50963524 | Msa1061480:CDS |
| TTTGGAACCCTGCTATTGTT+CGG | 0.388109 | 7_2:+50962142 | None:intergenic |
| TACTGTAATATCGATATTAC+AGG | 0.392999 | 7_2:-50964147 | Msa1061480:CDS |
| TTCAAGTTATGTCAATGAAA+TGG | 0.396353 | 7_2:-50962068 | Msa1061480:CDS |
| TCGCAGGAAGCTCGTGCTGC+TGG | 0.397798 | 7_2:-50962229 | Msa1061480:intron |
| ATACACCATGTCAACTTTCA+TGG | 0.399055 | 7_2:+50961782 | None:intergenic |
| TCCGCAGACATCAAGGCATT+TGG | 0.409190 | 7_2:+50962124 | None:intergenic |
| TGCAGGTGGAACTAACAAAA+AGG | 0.414771 | 7_2:-50963052 | Msa1061480:CDS |
| AGTGGAAATAACTCAGAATC+TGG | 0.415824 | 7_2:-50964781 | Msa1061480:CDS |
| GGAAGAAATTCATACTTGAT+AGG | 0.424040 | 7_2:-50962515 | Msa1061480:CDS |
| TAGGACATGTCTCATGTTGT+TGG | 0.424875 | 7_2:-50963387 | Msa1061480:CDS |
| TCTGCTGATCCCAGACCTGC+AGG | 0.434755 | 7_2:-50962100 | Msa1061480:CDS |
| ATATTATAGGATCGGATTCT+GGG | 0.435344 | 7_2:-50963095 | Msa1061480:intron |
| AACTCAGAATCTGGAGCTGC+AGG | 0.438593 | 7_2:-50964772 | Msa1061480:intron |
| TCTTGCCATGGGGAAAGGGC+AGG | 0.439550 | 7_2:-50963346 | Msa1061480:CDS |
| GTAGCTCGCCCTGCAGGTCT+GGG | 0.445211 | 7_2:+50962091 | None:intergenic |
| TCCAATAGAGGCCGGGGAAA+AGG | 0.446039 | 7_2:-50963027 | Msa1061480:intron |
| ATGTGGTCCCGAACAATAGC+AGG | 0.446706 | 7_2:-50962150 | Msa1061480:CDS |
| GTTCATGCGCTTTCATACTA+AGG | 0.450239 | 7_2:-50962418 | Msa1061480:CDS |
| AAGTTGAAGAAAGTGCCCTT+AGG | 0.452945 | 7_2:-50962189 | Msa1061480:CDS |
| GGCACACGGCACACTTAATC+CGG | 0.453805 | 7_2:+50964118 | None:intergenic |
| TGAGCAATTACTCGCTGATA+TGG | 0.455025 | 7_2:-50962756 | Msa1061480:CDS |
| GGATTTAACACCAGAGGAAA+AGG | 0.457443 | 7_2:-50962463 | Msa1061480:CDS |
| TCTTCATCAGCGTTCCAGTC+GGG | 0.457893 | 7_2:+50963763 | None:intergenic |
| TTGTCAGTACAAATGATTGC+TGG | 0.462838 | 7_2:-50961852 | Msa1061480:CDS |
| AACTTCTTGCCATGGGGAAA+GGG | 0.466541 | 7_2:-50963350 | Msa1061480:CDS |
| AGGCATGCACTGAACACTAT+AGG | 0.474478 | 7_2:-50963537 | Msa1061480:CDS |
| AAGGAGCGGGTGAAGCGAAA+AGG | 0.478432 | 7_2:-50964188 | Msa1061480:CDS |
| AAAGCATCTCATACCGGAAG+AGG | 0.481667 | 7_2:+50963487 | None:intergenic |
| AAGCACTTTCTCTTGCCCTA+AGG | 0.483082 | 7_2:+50962173 | None:intergenic |
| GAACTTCTTGCCATGGGGAA+AGG | 0.484313 | 7_2:-50963351 | Msa1061480:CDS |
| CCACTAGCTTCAACCAAAGA+AGG | 0.487227 | 7_2:+50962827 | None:intergenic |
| CTTGAAGTAGCTCGCCCTGC+AGG | 0.492075 | 7_2:+50962085 | None:intergenic |
| GTATGATATGCTCATTAAGA+AGG | 0.500449 | 7_2:-50961763 | Msa1061480:CDS |
| AAAGGCATCCAATAGAGGCC+GGG | 0.501091 | 7_2:-50963034 | Msa1061480:CDS |
| TCGATATTACAGGACAAATC+CGG | 0.502784 | 7_2:-50964137 | Msa1061480:CDS |
| ATATGCAAATCCATTTAAGA+AGG | 0.504454 | 7_2:-50962484 | Msa1061480:CDS |
| ACAAAAGCAATCATGCGTAC+AGG | 0.506958 | 7_2:-50964041 | Msa1061480:CDS |
| GCAGCATGTGTCTTGACTGA+GGG | 0.510463 | 7_2:+50963072 | None:intergenic |
| AGCACTTTCTCTTGCCCTAA+GGG | 0.511703 | 7_2:+50962174 | None:intergenic |
| CCTTCTTTGGTTGAAGCTAG+TGG | 0.513297 | 7_2:-50962827 | Msa1061480:CDS |
| AACGTCTATGCTGCGAGTTA+GGG | 0.516387 | 7_2:-50961911 | Msa1061480:CDS |
| CTTCATCAGCGTTCCAGTCG+GGG | 0.516887 | 7_2:+50963764 | None:intergenic |
| CTAGTGGTTATAACCCGAAA+AGG | 0.518651 | 7_2:-50962811 | Msa1061480:CDS |
| TGCTCATCGGATGTTCCAGC+TGG | 0.519198 | 7_2:-50961808 | Msa1061480:CDS |
| AGTTGAAGAAAGTGCCCTTA+GGG | 0.524489 | 7_2:-50962188 | Msa1061480:CDS |
| AAAAGGCATCCAATAGAGGC+CGG | 0.528852 | 7_2:-50963035 | Msa1061480:CDS |
| CAACTTTCATGGTATCCAGC+TGG | 0.530057 | 7_2:+50961793 | None:intergenic |
| TTGTAGGGACTTGAAATGTA+TGG | 0.531054 | 7_2:-50963610 | Msa1061480:intron |
| AACTGTGTATCTGAAGATGC+AGG | 0.531293 | 7_2:-50961880 | Msa1061480:CDS |
| AGGAGCGGGTGAAGCGAAAA+GGG | 0.534590 | 7_2:-50964187 | Msa1061480:CDS |
| TCAGTCAAGACACATGCTGC+AGG | 0.536875 | 7_2:-50963069 | Msa1061480:CDS |
| CTTCAAAATCCGATGCTCAT+CGG | 0.540300 | 7_2:-50961821 | Msa1061480:CDS |
| ATCTTCAGATACACAGTTGG+AGG | 0.541660 | 7_2:+50961885 | None:intergenic |
| CAGAGAAGAACTTCTTGCCA+TGG | 0.541694 | 7_2:-50963358 | Msa1061480:CDS |
| AGAAGGGCCGTCGTTTCTTG+AGG | 0.547054 | 7_2:+50962844 | None:intergenic |
| GGCAAGAGAAAGTGCTTATG+TGG | 0.547957 | 7_2:-50962167 | Msa1061480:CDS |
| AGAGAAGAACTTCTTGCCAT+GGG | 0.548697 | 7_2:-50963357 | Msa1061480:CDS |
| CAAAAGCAATCATGCGTACA+GGG | 0.550065 | 7_2:-50964040 | Msa1061480:CDS |
| CTTGCCATGGGGAAAGGGCA+GGG | 0.550128 | 7_2:-50963345 | Msa1061480:CDS |
| TGGTTATAACCCGAAAAGGC+AGG | 0.554434 | 7_2:-50962807 | Msa1061480:CDS |
| AGCAGAGTCCGCAGACATCA+AGG | 0.554768 | 7_2:+50962117 | None:intergenic |
| ATTTCCTCCATAATTTCTTG+AGG | 0.554820 | 7_2:+50962877 | None:intergenic |
| GTCACCCTGCCCTTTCCCCA+TGG | 0.560931 | 7_2:+50963341 | None:intergenic |
| TGCAGCATGTGTCTTGACTG+AGG | 0.563434 | 7_2:+50963071 | None:intergenic |
| AAGGCATCCAATAGAGGCCG+GGG | 0.566680 | 7_2:-50963033 | Msa1061480:CDS |
| TTCTTCATCAGCGTTCCAGT+CGG | 0.574557 | 7_2:+50963762 | None:intergenic |
| TTCCAGTCGGGGCAAATGAG+AGG | 0.574702 | 7_2:+50963775 | None:intergenic |
| CTGGAACATCCGATGAGCAT+CGG | 0.579223 | 7_2:+50961812 | None:intergenic |
| CAATCATGCGTACAGGGTCA+TGG | 0.583027 | 7_2:-50964034 | Msa1061480:intron |
| TCCAGTCGGGGCAAATGAGA+GGG | 0.588487 | 7_2:+50963776 | None:intergenic |
| TAAGAAGGATTTAACACCAG+AGG | 0.591084 | 7_2:-50962469 | Msa1061480:CDS |
| GTCAATGAAATGGATGCTGC+AGG | 0.592264 | 7_2:-50962058 | Msa1061480:CDS |
| TGCATCTTCAGATACACAGT+TGG | 0.592535 | 7_2:+50961882 | None:intergenic |
| TGTGAGTTAGGTCAAGGAGC+GGG | 0.592638 | 7_2:-50964201 | Msa1061480:intron |
| TATGATATGCTCATTAAGAA+GGG | 0.593230 | 7_2:-50961762 | Msa1061480:CDS |
| CACTAGCTTCAACCAAAGAA+GGG | 0.597471 | 7_2:+50962828 | None:intergenic |
| CTGCTGATCCCAGACCTGCA+GGG | 0.599308 | 7_2:-50962099 | Msa1061480:CDS |
| GAAGAAGTTGCTGAGCATGT+TGG | 0.602780 | 7_2:-50963574 | Msa1061480:CDS |
| GGGCAGGGTGACGACAAGAA+AGG | 0.606390 | 7_2:-50963330 | Msa1061480:intron |
| GTCAAGACACATGCTGCAGG+TGG | 0.607552 | 7_2:-50963066 | Msa1061480:CDS |
| AAGCATCTCATACCGGAAGA+GGG | 0.610002 | 7_2:+50963488 | None:intergenic |
| CAACACATAAGTCAAAATCT+GGG | 0.618792 | 7_2:+50964097 | None:intergenic |
| CATACCGGAAGAGGGAAGCA+TGG | 0.621701 | 7_2:+50963496 | None:intergenic |
| TCCAAATGCCTTGATGTCTG+CGG | 0.623348 | 7_2:-50962125 | Msa1061480:CDS |
| TAAGTCAAAATCTGGGCACA+CGG | 0.634031 | 7_2:+50964104 | None:intergenic |
| CCAAAATCCTCAAGAAACGA+CGG | 0.647065 | 7_2:-50962851 | Msa1061480:CDS |
| GACTCCTCAAGAAATTATGG+AGG | 0.662832 | 7_2:-50962881 | Msa1061480:CDS |
| TAACGACTCTGACACCGCGG+AGG | 0.676207 | 7_2:-50962729 | Msa1061480:CDS |
| AATGTATGGCATGAATAACT+GGG | 0.679265 | 7_2:-50963596 | Msa1061480:CDS |
| TTGTGAGTTAGGTCAAGGAG+CGG | 0.679425 | 7_2:-50964202 | Msa1061480:intron |
| TGTGGTCCCGAACAATAGCA+GGG | 0.685747 | 7_2:-50962149 | Msa1061480:CDS |
| TGTTGGAACAAAGAACAAAG+AGG | 0.696475 | 7_2:-50963557 | Msa1061480:CDS |
| GGATACCATGAAAGTTGACA+TGG | 0.698778 | 7_2:-50961787 | Msa1061480:CDS |
| GAGAAGAACTTCTTGCCATG+GGG | 0.705178 | 7_2:-50963356 | Msa1061480:CDS |
| TTTGATCTCTATCTCCTCCG+CGG | 0.711191 | 7_2:+50962715 | None:intergenic |
| GGCTTGATGAAAGAGAGCGT+AGG | 0.711501 | 7_2:-50962536 | Msa1061480:CDS |
| TGTGTATCTGAAGATGCAGG+AGG | 0.724507 | 7_2:-50961877 | Msa1061480:CDS |
| GTTTAACGACTCTGACACCG+CGG | 0.782455 | 7_2:-50962732 | Msa1061480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATGTAACTAATTTTAAT+TGG | - | chr7_2:50962088-50962107 | Msa1061480:CDS | 10.0% |
| !!! | AAATACTTTTTTTTTTTAAG+AGG | + | chr7_2:50962192-50962211 | None:intergenic | 10.0% |
| !! | TTCATTAAAATAAATGATTT+GGG | + | chr7_2:50962322-50962341 | None:intergenic | 10.0% |
| !! | TTTCATTAAAATAAATGATT+TGG | + | chr7_2:50962323-50962342 | None:intergenic | 10.0% |
| !!! | TTATTTTAATGAAAATCAAT+TGG | - | chr7_2:50962329-50962348 | Msa1061480:intron | 10.0% |
| !! | AACATAAAAATTAAAAAATG+TGG | + | chr7_2:50963033-50963052 | None:intergenic | 10.0% |
| !! | ATTTATTCATTTATGATTAA+TGG | - | chr7_2:50963465-50963484 | Msa1061480:intron | 10.0% |
| !! | ATATGATAAATCATTATATT+TGG | - | chr7_2:50964031-50964050 | Msa1061480:intron | 10.0% |
| !! | ATCTAAATTAAATTTCATTC+AGG | + | chr7_2:50961912-50961931 | None:intergenic | 15.0% |
| !!! | GTTTATGTTTTTTTTTTTAG+AGG | - | chr7_2:50961993-50962012 | Msa1061480:intron | 15.0% |
| !! | AAAATAATATGTAGTGTTTA+TGG | + | chr7_2:50962241-50962260 | None:intergenic | 15.0% |
| !! | TAAATAGACAATTGAATTAA+GGG | + | chr7_2:50963446-50963465 | None:intergenic | 15.0% |
| !! | ATAAATAGACAATTGAATTA+AGG | + | chr7_2:50963447-50963466 | None:intergenic | 15.0% |
| !!! | TCTATATCAGTTTTTTAATA+TGG | - | chr7_2:50963893-50963912 | Msa1061480:intron | 15.0% |
| !!! | TTTTCTACCAATAATTTTTT+TGG | - | chr7_2:50964087-50964106 | Msa1061480:CDS | 15.0% |
| !! | ATCTATCGTTTATATATTAT+AGG | - | chr7_2:50964612-50964631 | Msa1061480:intron | 15.0% |
| !!! | AAAGGTTTGAATTTTATATT+TGG | - | chr7_2:50964711-50964730 | Msa1061480:intron | 15.0% |
| !!! | TTACATAAACAATTTTGTGT+AGG | + | chr7_2:50962077-50962096 | None:intergenic | 20.0% |
| !!! | ACTAATTTTAATTGGATGAT+AGG | - | chr7_2:50962096-50962115 | Msa1061480:CDS | 20.0% |
| !! | CAAAATACTTACATTCATAT+TGG | + | chr7_2:50962164-50962183 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTTTTAAGAGGAA+TGG | + | chr7_2:50962187-50962206 | None:intergenic | 20.0% |
| !!! | AGTATTTTTCCATTCATTAT+TGG | - | chr7_2:50962205-50962224 | Msa1061480:CDS | 20.0% |
| !!! | TAAAATAAATGATTTGGGAT+TGG | + | chr7_2:50962317-50962336 | None:intergenic | 20.0% |
| !! | AAATTGTATCTTGTCTAATT+CGG | + | chr7_2:50962550-50962569 | None:intergenic | 20.0% |
| !!! | ACAAGATACAATTTTCAATT+TGG | - | chr7_2:50962556-50962575 | Msa1061480:intron | 20.0% |
| !!! | ATACAATTTTCAATTTGGTT+AGG | - | chr7_2:50962561-50962580 | Msa1061480:intron | 20.0% |
| !!! | TTTATTTTATAGTGATTCTG+TGG | + | chr7_2:50962671-50962690 | None:intergenic | 20.0% |
| !!! | GTTAATTTTATTTACTGTGT+AGG | - | chr7_2:50962892-50962911 | Msa1061480:intron | 20.0% |
| !!! | AATGTTTGAACATAATTTTC+TGG | - | chr7_2:50963490-50963509 | Msa1061480:intron | 20.0% |
| !!! | ATGTTTGAACATAATTTTCT+GGG | - | chr7_2:50963491-50963510 | Msa1061480:intron | 20.0% |
| !!! | CAATAATTTTTTTGGTTGTA+GGG | - | chr7_2:50964095-50964114 | Msa1061480:CDS | 20.0% |
| !! | AAGAAAATGATAATTCACAT+TGG | + | chr7_2:50964587-50964606 | None:intergenic | 20.0% |
| !! | TCGTTTATATATTATAGGAT+CGG | - | chr7_2:50964617-50964636 | Msa1061480:intron | 20.0% |
| !! | AATATTGTGTAATGTCAATT+GGG | + | chr7_2:50964745-50964764 | None:intergenic | 20.0% |
| !! | TGATACGTATCTATAATAAA+AGG | - | chr7_2:50965035-50965054 | Msa1061480:intron | 20.0% |
| !! | TATGAATTGAAAAACATTGA+AGG | - | chr7_2:50965163-50965182 | Msa1061480:intron | 20.0% |
| ! | CTAGAGAGTAAATGATAATT+AGG | - | chr7_2:50961824-50961843 | Msa1061480:CDS | 25.0% |
| ! | TAATTTAGATGTGTAGTCAT+AGG | - | chr7_2:50961922-50961941 | Msa1061480:intron | 25.0% |
| ! | AATTACTCACAATTCTTCAA+AGG | - | chr7_2:50962121-50962140 | Msa1061480:CDS | 25.0% |
| ! | AAAGAATAGCCAATAATGAA+TGG | + | chr7_2:50962217-50962236 | None:intergenic | 25.0% |
| ! | CAAAACAACTTAATGAGAAT+TGG | + | chr7_2:50962360-50962379 | None:intergenic | 25.0% |
| !!! | ACCTAAATCAATTTGGTTTT+CGG | + | chr7_2:50962507-50962526 | None:intergenic | 25.0% |
| !!! | CCTATGTTTTTATGATTACT+CGG | + | chr7_2:50962729-50962748 | None:intergenic | 25.0% |
| ! | CGAGTAATCATAAAAACATA+GGG | - | chr7_2:50962727-50962746 | Msa1061480:CDS | 25.0% |
| !!! | TTTTTAAACTTTGACTTGGA+TGG | + | chr7_2:50963114-50963133 | None:intergenic | 25.0% |
| !!! | TTGGTTTTTAAACTTTGACT+TGG | + | chr7_2:50963118-50963137 | None:intergenic | 25.0% |
| ! | AAAACCAAAGAATGAAAATG+TGG | + | chr7_2:50963151-50963170 | None:intergenic | 25.0% |
| ! | ATAATATTTGTACAACACGT+TGG | - | chr7_2:50963217-50963236 | Msa1061480:intron | 25.0% |
| ! | GATAATTTCAAAGCTACAAA+TGG | + | chr7_2:50963278-50963297 | None:intergenic | 25.0% |
| ! | AATTGAATTAAGGGTTGTTA+GGG | + | chr7_2:50963437-50963456 | None:intergenic | 25.0% |
| !! | TGTTTGAACATAATTTTCTG+GGG | - | chr7_2:50963492-50963511 | Msa1061480:intron | 25.0% |
| ! | TACTGTAATATCGATATTAC+AGG | - | chr7_2:50963573-50963592 | Msa1061480:CDS | 25.0% |
| ! | AGGAAAACATTTGAAAGTAA+TGG | + | chr7_2:50963719-50963738 | None:intergenic | 25.0% |
| ! | TAAGTTTAACAAGACATCAA+AGG | + | chr7_2:50963739-50963758 | None:intergenic | 25.0% |
| !!! | TAACATTTTGATCGATAGAA+AGG | - | chr7_2:50963757-50963776 | Msa1061480:CDS | 25.0% |
| !! | TGGTAATGCAATTATATCAA+CGG | + | chr7_2:50963830-50963849 | None:intergenic | 25.0% |
| ! | CCTACAACCAAAAAAATTAT+TGG | + | chr7_2:50964097-50964116 | None:intergenic | 25.0% |
| !!! | CCAATAATTTTTTTGGTTGT+AGG | - | chr7_2:50964094-50964113 | Msa1061480:CDS | 25.0% |
| ! | TCATTCTTTCAGATAGATTT+AGG | - | chr7_2:50964530-50964549 | Msa1061480:intron | 25.0% |
| ! | CATTCTTTCAGATAGATTTA+GGG | - | chr7_2:50964531-50964550 | Msa1061480:intron | 25.0% |
| ! | CAATATTGTGTAATGTCAAT+TGG | + | chr7_2:50964746-50964765 | None:intergenic | 25.0% |
| !!! | TACACAATATTGATTCTTTG+AGG | - | chr7_2:50964754-50964773 | Msa1061480:intron | 25.0% |
| !!! | AACAACCATTTTAGTTTTGT+TGG | - | chr7_2:50965060-50965079 | Msa1061480:intron | 25.0% |
| ! | AGAAACCAACAAAACTAAAA+TGG | + | chr7_2:50965068-50965087 | None:intergenic | 25.0% |
| !!! | TTTTTTTACGATTTTGAGTG+TGG | + | chr7_2:50965104-50965123 | None:intergenic | 25.0% |
| ! | ATATGCAAATCCATTTAAGA+AGG | - | chr7_2:50965236-50965255 | Msa1061480:intron | 25.0% |
| ! | TGGATGACATTAAATTGTTA+TGG | - | chr7_2:50965406-50965425 | Msa1061480:intron | 25.0% |
| !! | TTCAAGTTATGTCAATGAAA+TGG | - | chr7_2:50965652-50965671 | Msa1061480:intron | 25.0% |
| ! | TATGATATGCTCATTAAGAA+GGG | - | chr7_2:50965958-50965977 | Msa1061480:intron | 25.0% |
| TTTACTCTCTAGTAGTATGA+TGG | + | chr7_2:50961816-50961835 | None:intergenic | 30.0% | |
| ! | TAATTAGGCCTTGTAAGTAT+AGG | - | chr7_2:50961839-50961858 | Msa1061480:CDS | 30.0% |
| TGAACAATCCTATACTTACA+AGG | + | chr7_2:50961850-50961869 | None:intergenic | 30.0% | |
| ! | GTGAAGTAAAAGTTAGTTTG+TGG | + | chr7_2:50962055-50962074 | None:intergenic | 30.0% |
| TGAAAATAAGGAAGTTGACT+CGG | + | chr7_2:50962293-50962312 | None:intergenic | 30.0% | |
| ! | TTTGGGATTGGATGAAAATA+AGG | + | chr7_2:50962305-50962324 | None:intergenic | 30.0% |
| !! | GATATTTTTGACGTTAGCAT+CGG | - | chr7_2:50962443-50962462 | Msa1061480:CDS | 30.0% |
| TTGAGATCCAAAATAACTGA+TGG | + | chr7_2:50962475-50962494 | None:intergenic | 30.0% | |
| ! | ACCGAAAACCAAATTGATTT+AGG | - | chr7_2:50962503-50962522 | Msa1061480:CDS | 30.0% |
| TGAACTCACCTAAATCAATT+TGG | + | chr7_2:50962514-50962533 | None:intergenic | 30.0% | |
| ATAAGTTTGACAAAGGAACA+AGG | + | chr7_2:50962648-50962667 | None:intergenic | 30.0% | |
| CCGAGTAATCATAAAAACAT+AGG | - | chr7_2:50962726-50962745 | Msa1061480:CDS | 30.0% | |
| ! | AAATCAAACCTTTTGCATGA+TGG | + | chr7_2:50962786-50962805 | None:intergenic | 30.0% |
| ! | ATGCAACTATATGTTTTACG+TGG | - | chr7_2:50962870-50962889 | Msa1061480:CDS | 30.0% |
| TTTATTTACTGTGTAGGTCA+AGG | - | chr7_2:50962898-50962917 | Msa1061480:intron | 30.0% | |
| ATAGAGTATGATGAGTGAAA+AGG | + | chr7_2:50962976-50962995 | None:intergenic | 30.0% | |
| ! | ATAGCCACATTTTCATTCTT+TGG | - | chr7_2:50963144-50963163 | Msa1061480:intron | 30.0% |
| AGAAACTGTAACTGTATGTT+TGG | - | chr7_2:50963385-50963404 | Msa1061480:CDS | 30.0% | |
| CAATTGAATTAAGGGTTGTT+AGG | + | chr7_2:50963438-50963457 | None:intergenic | 30.0% | |
| CAACACATAAGTCAAAATCT+GGG | + | chr7_2:50963626-50963645 | None:intergenic | 30.0% | |
| TCAACACATAAGTCAAAATC+TGG | + | chr7_2:50963627-50963646 | None:intergenic | 30.0% | |
| TGATATAATTGCATTACCAC+TGG | - | chr7_2:50963831-50963850 | Msa1061480:intron | 30.0% | |
| GACAAATTATCCTGTCAATA+GGG | + | chr7_2:50963921-50963940 | None:intergenic | 30.0% | |
| AGACAAATTATCCTGTCAAT+AGG | + | chr7_2:50963922-50963941 | None:intergenic | 30.0% | |
| ! | TGAAGAAATTTTGCTTCTAG+AGG | - | chr7_2:50963974-50963993 | Msa1061480:intron | 30.0% |
| AAATGTATGGCATGAATAAC+TGG | - | chr7_2:50964123-50964142 | Msa1061480:CDS | 30.0% | |
| AATGTATGGCATGAATAACT+GGG | - | chr7_2:50964124-50964143 | Msa1061480:CDS | 30.0% | |
| ! | TCATTTAAAGCATCTCATAC+CGG | + | chr7_2:50964242-50964261 | None:intergenic | 30.0% |
| ! | GCTAATCGTTCTTATTTACT+AGG | - | chr7_2:50964314-50964333 | Msa1061480:intron | 30.0% |
| TATATTATAGGATCGGATTC+TGG | - | chr7_2:50964624-50964643 | Msa1061480:intron | 30.0% | |
| ATATTATAGGATCGGATTCT+GGG | - | chr7_2:50964625-50964644 | Msa1061480:intron | 30.0% | |
| ! | TAAAATTCAAACCTTTTCCC+CGG | + | chr7_2:50964707-50964726 | None:intergenic | 30.0% |
| TGTAATGTCAATTGGGATTT+AGG | + | chr7_2:50964738-50964757 | None:intergenic | 30.0% | |
| TGTCAATGACAAAAGAACTA+TGG | + | chr7_2:50964819-50964838 | None:intergenic | 30.0% | |
| ATTTCCTCCATAATTTCTTG+AGG | + | chr7_2:50964846-50964865 | None:intergenic | 30.0% | |
| ! | ATATCAAATTCCTGCCTTTT+CGG | + | chr7_2:50964926-50964945 | None:intergenic | 30.0% |
| GGAAGAAATTCATACTTGAT+AGG | - | chr7_2:50965205-50965224 | Msa1061480:intron | 30.0% | |
| GGTGTTAAATCCTTCTTAAA+TGG | + | chr7_2:50965249-50965268 | None:intergenic | 30.0% | |
| GAAAAGAATTCAAGAGCTTA+AGG | - | chr7_2:50965374-50965393 | Msa1061480:intron | 30.0% | |
| !!! | CATTCACTTTTTTCATTGCA+TGG | - | chr7_2:50965430-50965449 | Msa1061480:intron | 30.0% |
| ! | TCTCTGACATTTGTTAAACA+TGG | - | chr7_2:50965468-50965487 | Msa1061480:intron | 30.0% |
| !!! | TTTTTGTTTTCTGAAACCGT+CGG | - | chr7_2:50965765-50965784 | Msa1061480:intron | 30.0% |
| GTATGATATGCTCATTAAGA+AGG | - | chr7_2:50965957-50965976 | Msa1061480:intron | 30.0% | |
| ! | GATTGCGGGTATTTTACAAA+TGG | - | chr7_2:50962026-50962045 | Msa1061480:intron | 35.0% |
| ! | GTTGGATCCATCAGTTATTT+TGG | - | chr7_2:50962465-50962484 | Msa1061480:CDS | 35.0% |
| TGATTTAGGTGAGTTCAGTT+TGG | - | chr7_2:50962517-50962536 | Msa1061480:CDS | 35.0% | |
| TTTGAGTGTGCAATACTTAC+AGG | + | chr7_2:50962610-50962629 | None:intergenic | 35.0% | |
| TCTGTGGATAAGTTTGACAA+AGG | + | chr7_2:50962655-50962674 | None:intergenic | 35.0% | |
| ATGATGATCCATCATGCAAA+AGG | - | chr7_2:50962775-50962794 | Msa1061480:CDS | 35.0% | |
| AAAAAGAAGAATGCTGCAAG+TGG | - | chr7_2:50962921-50962940 | Msa1061480:intron | 35.0% | |
| AGTGGAAATAACTCAGAATC+TGG | - | chr7_2:50962939-50962958 | Msa1061480:intron | 35.0% | |
| TGGATGGAAAAGAACAAGTT+TGG | + | chr7_2:50963098-50963117 | None:intergenic | 35.0% | |
| AAAATGTGGCTATATGCAGT+TGG | + | chr7_2:50963137-50963156 | None:intergenic | 35.0% | |
| ATACACAATAAGTGCTCGTT+TGG | + | chr7_2:50963349-50963368 | None:intergenic | 35.0% | |
| ACATACAGTTACAGTTTCTC+AGG | + | chr7_2:50963384-50963403 | None:intergenic | 35.0% | |
| TGTTAGGGTTTATGTTTCCA+AGG | + | chr7_2:50963422-50963441 | None:intergenic | 35.0% | |
| TCGATATTACAGGACAAATC+CGG | - | chr7_2:50963583-50963602 | Msa1061480:CDS | 35.0% | |
| AGATTCACAAGCATTTATGC+AGG | + | chr7_2:50963798-50963817 | None:intergenic | 35.0% | |
| CAATTATATCAACGGCGATT+TGG | + | chr7_2:50963822-50963841 | None:intergenic | 35.0% | |
| !! | AATTGCATTACCACTGGTTT+CGG | - | chr7_2:50963837-50963856 | Msa1061480:intron | 35.0% |
| TAATATGGTTCCCTATTGAC+AGG | - | chr7_2:50963908-50963927 | Msa1061480:intron | 35.0% | |
| !!! | ATTTTGCTTCTAGAGGTACT+TGG | - | chr7_2:50963981-50964000 | Msa1061480:intron | 35.0% |
| ! | TTTAAAGTCGATGCGACTAA+TGG | - | chr7_2:50964004-50964023 | Msa1061480:intron | 35.0% |
| TTGTAGGGACTTGAAATGTA+TGG | - | chr7_2:50964110-50964129 | Msa1061480:CDS | 35.0% | |
| TGTTGGAACAAAGAACAAAG+AGG | - | chr7_2:50964163-50964182 | Msa1061480:CDS | 35.0% | |
| ACACTATAGGATTGTGTACT+TGG | - | chr7_2:50964196-50964215 | Msa1061480:intron | 35.0% | |
| !! | AACAAAAAGGCATCCAATAG+AGG | - | chr7_2:50964681-50964700 | Msa1061480:intron | 35.0% |
| ACAGACTCCTCAAGAAATTA+TGG | - | chr7_2:50964836-50964855 | Msa1061480:intron | 35.0% | |
| ! | TATCAAATTCCTGCCTTTTC+GGG | + | chr7_2:50964925-50964944 | None:intergenic | 35.0% |
| TAAGAAGGATTTAACACCAG+AGG | - | chr7_2:50965251-50965270 | Msa1061480:intron | 35.0% | |
| AGTTCTGTGTTCAGAGATAA+TGG | + | chr7_2:50965352-50965371 | None:intergenic | 35.0% | |
| AGAGCTTAAGGTTTGATTCA+TGG | - | chr7_2:50965386-50965405 | Msa1061480:intron | 35.0% | |
| TTGTCAGTACAAATGATTGC+TGG | - | chr7_2:50965868-50965887 | Msa1061480:intron | 35.0% | |
| ATACACCATGTCAACTTTCA+TGG | + | chr7_2:50965941-50965960 | None:intergenic | 35.0% | |
| ATGCTCATTAAGAAGGGATT+TGG | - | chr7_2:50965964-50965983 | Msa1061480:intron | 35.0% | |
| AGATGTGTAGTCATAGGTGT+TGG | - | chr7_2:50961928-50961947 | Msa1061480:intron | 40.0% | |
| !! | AGAGGCACTTTGAATGATTG+CGG | - | chr7_2:50962011-50962030 | Msa1061480:intron | 40.0% |
| !!! | TTTTTGACGTTAGCATCGGT+TGG | - | chr7_2:50962447-50962466 | Msa1061480:CDS | 40.0% |
| !! | TAGCTTTGAAATTATCGCCG+TGG | - | chr7_2:50963282-50963301 | Msa1061480:intron | 40.0% |
| !! | TTCTGGGGATTTTGTGAGTT+AGG | - | chr7_2:50963507-50963526 | Msa1061480:CDS | 40.0% |
| ! | GGATTTTGTGAGTTAGGTCA+AGG | - | chr7_2:50963513-50963532 | Msa1061480:CDS | 40.0% |
| TAAGTCAAAATCTGGGCACA+CGG | + | chr7_2:50963619-50963638 | None:intergenic | 40.0% | |
| ! | TGTGTTGAGTGCTTTTCTGT+TGG | - | chr7_2:50963639-50963658 | Msa1061480:intron | 40.0% |
| !! | TACGCATGATTGCTTTTGTG+GGG | + | chr7_2:50963678-50963697 | None:intergenic | 40.0% |
| !! | GTACGCATGATTGCTTTTGT+GGG | + | chr7_2:50963679-50963698 | None:intergenic | 40.0% |
| !! | TGTACGCATGATTGCTTTTG+TGG | + | chr7_2:50963680-50963699 | None:intergenic | 40.0% |
| ACAAAAGCAATCATGCGTAC+AGG | - | chr7_2:50963679-50963698 | Msa1061480:intron | 40.0% | |
| CAAAAGCAATCATGCGTACA+GGG | - | chr7_2:50963680-50963699 | Msa1061480:intron | 40.0% | |
| TAGGACATGTCTCATGTTGT+TGG | - | chr7_2:50964333-50964352 | Msa1061480:intron | 40.0% | |
| AGAGAAGAACTTCTTGCCAT+GGG | - | chr7_2:50964363-50964382 | Msa1061480:intron | 40.0% | |
| TGCAGGTGGAACTAACAAAA+AGG | - | chr7_2:50964668-50964687 | Msa1061480:intron | 40.0% | |
| GACTCCTCAAGAAATTATGG+AGG | - | chr7_2:50964839-50964858 | Msa1061480:intron | 40.0% | |
| CCAAAATCCTCAAGAAACGA+CGG | - | chr7_2:50964869-50964888 | Msa1061480:intron | 40.0% | |
| ! | CACTAGCTTCAACCAAAGAA+GGG | + | chr7_2:50964895-50964914 | None:intergenic | 40.0% |
| CTAGTGGTTATAACCCGAAA+AGG | - | chr7_2:50964909-50964928 | Msa1061480:intron | 40.0% | |
| TGAGCAATTACTCGCTGATA+TGG | - | chr7_2:50964964-50964983 | Msa1061480:intron | 40.0% | |
| GGATTTAACACCAGAGGAAA+AGG | - | chr7_2:50965257-50965276 | Msa1061480:intron | 40.0% | |
| ! | CGACATATTTCCTTTTCCTC+TGG | + | chr7_2:50965270-50965289 | None:intergenic | 40.0% |
| GTTCATGCGCTTTCATACTA+AGG | - | chr7_2:50965302-50965321 | Msa1061480:intron | 40.0% | |
| ! | CATTTGTTAAACATGGTCGC+AGG | - | chr7_2:50965475-50965494 | Msa1061480:intron | 40.0% |
| !! | AAGTTGAAGAAAGTGCCCTT+AGG | - | chr7_2:50965531-50965550 | Msa1061480:intron | 40.0% |
| !! | AGTTGAAGAAAGTGCCCTTA+GGG | - | chr7_2:50965532-50965551 | Msa1061480:intron | 40.0% |
| ! | TTTGGAACCCTGCTATTGTT+CGG | + | chr7_2:50965581-50965600 | None:intergenic | 40.0% |
| ATCTTCAGATACACAGTTGG+AGG | + | chr7_2:50965838-50965857 | None:intergenic | 40.0% | |
| TGCATCTTCAGATACACAGT+TGG | + | chr7_2:50965841-50965860 | None:intergenic | 40.0% | |
| AACTGTGTATCTGAAGATGC+AGG | - | chr7_2:50965840-50965859 | Msa1061480:intron | 40.0% | |
| CTTCAAAATCCGATGCTCAT+CGG | - | chr7_2:50965899-50965918 | Msa1061480:intron | 40.0% | |
| GGATACCATGAAAGTTGACA+TGG | - | chr7_2:50965933-50965952 | Msa1061480:intron | 40.0% | |
| ! | GAGGCACTTTGAATGATTGC+GGG | - | chr7_2:50962012-50962031 | Msa1061480:intron | 45.0% |
| ! | TATCGCCGTGGATTGAGTAT+CGG | - | chr7_2:50963294-50963313 | Msa1061480:intron | 45.0% |
| ACATCCCGATACTCAATCCA+CGG | + | chr7_2:50963302-50963321 | None:intergenic | 45.0% | |
| GAGCACTTATTGTGTATGCG+TGG | - | chr7_2:50963352-50963371 | Msa1061480:CDS | 45.0% | |
| TTGTGAGTTAGGTCAAGGAG+CGG | - | chr7_2:50963518-50963537 | Msa1061480:CDS | 45.0% | |
| AACAATGTTGCCGAAACCAG+TGG | + | chr7_2:50963850-50963869 | None:intergenic | 45.0% | |
| TTCTTCATCAGCGTTCCAGT+CGG | + | chr7_2:50963961-50963980 | None:intergenic | 45.0% | |
| AAAGTCGATGCGACTAATGG+TGG | - | chr7_2:50964007-50964026 | Msa1061480:intron | 45.0% | |
| GAAGAAGTTGCTGAGCATGT+TGG | - | chr7_2:50964146-50964165 | Msa1061480:CDS | 45.0% | |
| AGGCATGCACTGAACACTAT+AGG | - | chr7_2:50964183-50964202 | Msa1061480:CDS | 45.0% | |
| AAGCATCTCATACCGGAAGA+GGG | + | chr7_2:50964235-50964254 | None:intergenic | 45.0% | |
| ! | AAAGCATCTCATACCGGAAG+AGG | + | chr7_2:50964236-50964255 | None:intergenic | 45.0% |
| CAGAGAAGAACTTCTTGCCA+TGG | - | chr7_2:50964362-50964381 | Msa1061480:intron | 45.0% | |
| GAGAAGAACTTCTTGCCATG+GGG | - | chr7_2:50964364-50964383 | Msa1061480:intron | 45.0% | |
| AACTTCTTGCCATGGGGAAA+GGG | - | chr7_2:50964370-50964389 | Msa1061480:intron | 45.0% | |
| !! | AAAAGGCATCCAATAGAGGC+CGG | - | chr7_2:50964685-50964704 | Msa1061480:intron | 45.0% |
| ! | CCGTCGTTTCTTGAGGATTT+TGG | + | chr7_2:50964872-50964891 | None:intergenic | 45.0% |
| ! | CCACTAGCTTCAACCAAAGA+AGG | + | chr7_2:50964896-50964915 | None:intergenic | 45.0% |
| CCTTCTTTGGTTGAAGCTAG+TGG | - | chr7_2:50964893-50964912 | Msa1061480:intron | 45.0% | |
| TGGTTATAACCCGAAAAGGC+AGG | - | chr7_2:50964913-50964932 | Msa1061480:intron | 45.0% | |
| TTTGATCTCTATCTCCTCCG+CGG | + | chr7_2:50965008-50965027 | None:intergenic | 45.0% | |
| AGCACTTTCTCTTGCCCTAA+GGG | + | chr7_2:50965549-50965568 | None:intergenic | 45.0% | |
| AAGCACTTTCTCTTGCCCTA+AGG | + | chr7_2:50965550-50965569 | None:intergenic | 45.0% | |
| !! | GGCAAGAGAAAGTGCTTATG+TGG | - | chr7_2:50965553-50965572 | Msa1061480:intron | 45.0% |
| TTGGAACCCTGCTATTGTTC+GGG | + | chr7_2:50965580-50965599 | None:intergenic | 45.0% | |
| TCCAAATGCCTTGATGTCTG+CGG | - | chr7_2:50965595-50965614 | Msa1061480:intron | 45.0% | |
| GTCAATGAAATGGATGCTGC+AGG | - | chr7_2:50965662-50965681 | Msa1061480:intron | 45.0% | |
| TGACAGAACATTACAGCCGA+CGG | + | chr7_2:50965784-50965803 | None:intergenic | 45.0% | |
| AAACGTCTATGCTGCGAGTT+AGG | - | chr7_2:50965808-50965827 | Msa1061480:intron | 45.0% | |
| AACGTCTATGCTGCGAGTTA+GGG | - | chr7_2:50965809-50965828 | Msa1061480:intron | 45.0% | |
| TGTGTATCTGAAGATGCAGG+AGG | - | chr7_2:50965843-50965862 | Msa1061480:intron | 45.0% | |
| CAACTTTCATGGTATCCAGC+TGG | + | chr7_2:50965930-50965949 | None:intergenic | 45.0% | |
| !!! | ATTAAATTTTTTAATTTTGT+TGG | - | chr7_2:50962584-50962603 | Msa1061480:intron | 5.0% |
| !!! | TTTTACAAAATAATAAATAA+AGG | + | chr7_2:50962696-50962715 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTGTAATT+AGG | - | chr7_2:50962830-50962849 | Msa1061480:CDS | 5.0% |
| ! | AACTCAGAATCTGGAGCTGC+AGG | - | chr7_2:50962948-50962967 | Msa1061480:intron | 50.0% |
| AGTGTTGCGCGATCTTCGTA+AGG | - | chr7_2:50963176-50963195 | Msa1061480:intron | 50.0% | |
| ! | ATCGCCGTGGATTGAGTATC+GGG | - | chr7_2:50963295-50963314 | Msa1061480:intron | 50.0% |
| TGTGAGTTAGGTCAAGGAGC+GGG | - | chr7_2:50963519-50963538 | Msa1061480:CDS | 50.0% | |
| CAATCATGCGTACAGGGTCA+TGG | - | chr7_2:50963686-50963705 | Msa1061480:intron | 50.0% | |
| TCTTCATCAGCGTTCCAGTC+GGG | + | chr7_2:50963960-50963979 | None:intergenic | 50.0% | |
| GAACTTCTTGCCATGGGGAA+AGG | - | chr7_2:50964369-50964388 | Msa1061480:intron | 50.0% | |
| GCAGCATGTGTCTTGACTGA+GGG | + | chr7_2:50964651-50964670 | None:intergenic | 50.0% | |
| TGCAGCATGTGTCTTGACTG+AGG | + | chr7_2:50964652-50964671 | None:intergenic | 50.0% | |
| TCAGTCAAGACACATGCTGC+AGG | - | chr7_2:50964651-50964670 | Msa1061480:intron | 50.0% | |
| !! | AAAGGCATCCAATAGAGGCC+GGG | - | chr7_2:50964686-50964705 | Msa1061480:intron | 50.0% |
| AAGAAACGACGGCCCTTCTT+TGG | - | chr7_2:50964880-50964899 | Msa1061480:intron | 50.0% | |
| GTTTAACGACTCTGACACCG+CGG | - | chr7_2:50964988-50965007 | Msa1061480:intron | 50.0% | |
| ! | GGCTTGATGAAAGAGAGCGT+AGG | - | chr7_2:50965184-50965203 | Msa1061480:intron | 50.0% |
| ATGTGGTCCCGAACAATAGC+AGG | - | chr7_2:50965570-50965589 | Msa1061480:intron | 50.0% | |
| TGTGGTCCCGAACAATAGCA+GGG | - | chr7_2:50965571-50965590 | Msa1061480:intron | 50.0% | |
| ! | TCCGCAGACATCAAGGCATT+TGG | + | chr7_2:50965599-50965618 | None:intergenic | 50.0% |
| GTCGGCTGTAATGTTCTGTC+AGG | - | chr7_2:50965783-50965802 | Msa1061480:intron | 50.0% | |
| CTGGAACATCCGATGAGCAT+CGG | + | chr7_2:50965911-50965930 | None:intergenic | 50.0% | |
| GTTTGGATCGAAGCGTGCCT+TGG | - | chr7_2:50963402-50963421 | Msa1061480:intron | 55.0% | |
| AAGGAGCGGGTGAAGCGAAA+AGG | - | chr7_2:50963532-50963551 | Msa1061480:CDS | 55.0% | |
| AGGAGCGGGTGAAGCGAAAA+GGG | - | chr7_2:50963533-50963552 | Msa1061480:CDS | 55.0% | |
| GGCACACGGCACACTTAATC+CGG | + | chr7_2:50963605-50963624 | None:intergenic | 55.0% | |
| TCCAGTCGGGGCAAATGAGA+GGG | + | chr7_2:50963947-50963966 | None:intergenic | 55.0% | |
| TTCCAGTCGGGGCAAATGAG+AGG | + | chr7_2:50963948-50963967 | None:intergenic | 55.0% | |
| CTTCATCAGCGTTCCAGTCG+GGG | + | chr7_2:50963959-50963978 | None:intergenic | 55.0% | |
| CTCTCCATGCTTCCCTCTTC+CGG | - | chr7_2:50964220-50964239 | Msa1061480:intron | 55.0% | |
| CATACCGGAAGAGGGAAGCA+TGG | + | chr7_2:50964227-50964246 | None:intergenic | 55.0% | |
| GTCAAGACACATGCTGCAGG+TGG | - | chr7_2:50964654-50964673 | Msa1061480:intron | 55.0% | |
| ! | AAGGCATCCAATAGAGGCCG+GGG | - | chr7_2:50964687-50964706 | Msa1061480:intron | 55.0% |
| TCCAATAGAGGCCGGGGAAA+AGG | - | chr7_2:50964693-50964712 | Msa1061480:intron | 55.0% | |
| ! | ACCTTTTCCCCGGCCTCTAT+TGG | + | chr7_2:50964697-50964716 | None:intergenic | 55.0% |
| AGAAGGGCCGTCGTTTCTTG+AGG | + | chr7_2:50964879-50964898 | None:intergenic | 55.0% | |
| AGCAGAGTCCGCAGACATCA+AGG | + | chr7_2:50965606-50965625 | None:intergenic | 55.0% | |
| TGCTCATCGGATGTTCCAGC+TGG | - | chr7_2:50965912-50965931 | Msa1061480:intron | 55.0% | |
| TCCCTCTCATTTGCCCCGAC+TGG | - | chr7_2:50963943-50963962 | Msa1061480:intron | 60.0% | |
| TCTTGCCATGGGGAAAGGGC+AGG | - | chr7_2:50964374-50964393 | Msa1061480:intron | 60.0% | |
| CTTGCCATGGGGAAAGGGCA+GGG | - | chr7_2:50964375-50964394 | Msa1061480:intron | 60.0% | |
| GGGCAGGGTGACGACAAGAA+AGG | - | chr7_2:50964390-50964409 | Msa1061480:intron | 60.0% | |
| TAACGACTCTGACACCGCGG+AGG | - | chr7_2:50964991-50965010 | Msa1061480:intron | 60.0% | |
| TCTGCTGATCCCAGACCTGC+AGG | - | chr7_2:50965620-50965639 | Msa1061480:intron | 60.0% | |
| CTGCTGATCCCAGACCTGCA+GGG | - | chr7_2:50965621-50965640 | Msa1061480:intron | 60.0% | |
| CTTGAAGTAGCTCGCCCTGC+AGG | + | chr7_2:50965638-50965657 | None:intergenic | 60.0% | |
| GTCACCCTGCCCTTTCCCCA+TGG | + | chr7_2:50964382-50964401 | None:intergenic | 65.0% | |
| TCGCAGGAAGCTCGTGCTGC+TGG | - | chr7_2:50965491-50965510 | Msa1061480:intron | 65.0% | |
| GTAGCTCGCCCTGCAGGTCT+GGG | + | chr7_2:50965632-50965651 | None:intergenic | 65.0% | |
| AGTAGCTCGCCCTGCAGGTC+TGG | + | chr7_2:50965633-50965652 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 50961746 | 50965996 | 50961746 | ID=Msa1061480;Name=Msa1061480 |
| chr7_2 | mRNA | 50961746 | 50965996 | 50961746 | ID=Msa1061480-mRNA-1;Parent=Msa1061480;Name=Msa1061480-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0|0.81|0.9|0.90|11|0|473 |
| chr7_2 | exon | 50965989 | 50965996 | 50965989 | ID=Msa1061480-mRNA-1:exon:9229;Parent=Msa1061480-mRNA-1 |
| chr7_2 | exon | 50964773 | 50964828 | 50964773 | ID=Msa1061480-mRNA-1:exon:9228;Parent=Msa1061480-mRNA-1 |
| chr7_2 | exon | 50964035 | 50964213 | 50964035 | ID=Msa1061480-mRNA-1:exon:9227;Parent=Msa1061480-mRNA-1 |
| chr7_2 | exon | 50963747 | 50963812 | 50963747 | ID=Msa1061480-mRNA-1:exon:9226;Parent=Msa1061480-mRNA-1 |
| chr7_2 | exon | 50963501 | 50963626 | 50963501 | ID=Msa1061480-mRNA-1:exon:9225;Parent=Msa1061480-mRNA-1 |
| chr7_2 | exon | 50963331 | 50963406 | 50963331 | ID=Msa1061480-mRNA-1:exon:9224;Parent=Msa1061480-mRNA-1 |
| chr7_2 | exon | 50963028 | 50963108 | 50963028 | ID=Msa1061480-mRNA-1:exon:9223;Parent=Msa1061480-mRNA-1 |
| chr7_2 | exon | 50962686 | 50962902 | 50962686 | ID=Msa1061480-mRNA-1:exon:9222;Parent=Msa1061480-mRNA-1 |
| chr7_2 | exon | 50962347 | 50962557 | 50962347 | ID=Msa1061480-mRNA-1:exon:9221;Parent=Msa1061480-mRNA-1 |
| chr7_2 | exon | 50962036 | 50962245 | 50962036 | ID=Msa1061480-mRNA-1:exon:9220;Parent=Msa1061480-mRNA-1 |
| chr7_2 | exon | 50961746 | 50961937 | 50961746 | ID=Msa1061480-mRNA-1:exon:9219;Parent=Msa1061480-mRNA-1 |
| chr7_2 | CDS | 50965989 | 50965996 | 50965989 | ID=Msa1061480-mRNA-1:cds;Parent=Msa1061480-mRNA-1 |
| chr7_2 | CDS | 50964773 | 50964828 | 50964773 | ID=Msa1061480-mRNA-1:cds;Parent=Msa1061480-mRNA-1 |
| chr7_2 | CDS | 50964035 | 50964213 | 50964035 | ID=Msa1061480-mRNA-1:cds;Parent=Msa1061480-mRNA-1 |
| chr7_2 | CDS | 50963747 | 50963812 | 50963747 | ID=Msa1061480-mRNA-1:cds;Parent=Msa1061480-mRNA-1 |
| chr7_2 | CDS | 50963501 | 50963626 | 50963501 | ID=Msa1061480-mRNA-1:cds;Parent=Msa1061480-mRNA-1 |
| chr7_2 | CDS | 50963331 | 50963406 | 50963331 | ID=Msa1061480-mRNA-1:cds;Parent=Msa1061480-mRNA-1 |
| chr7_2 | CDS | 50963028 | 50963108 | 50963028 | ID=Msa1061480-mRNA-1:cds;Parent=Msa1061480-mRNA-1 |
| chr7_2 | CDS | 50962686 | 50962902 | 50962686 | ID=Msa1061480-mRNA-1:cds;Parent=Msa1061480-mRNA-1 |
| chr7_2 | CDS | 50962347 | 50962557 | 50962347 | ID=Msa1061480-mRNA-1:cds;Parent=Msa1061480-mRNA-1 |
| chr7_2 | CDS | 50962036 | 50962245 | 50962036 | ID=Msa1061480-mRNA-1:cds;Parent=Msa1061480-mRNA-1 |
| chr7_2 | CDS | 50961746 | 50961937 | 50961746 | ID=Msa1061480-mRNA-1:cds;Parent=Msa1061480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
